Viewing data for Galago moholi


Scientific name Galago moholi
Common name South African galago
Maximum lifespan 16.60 years (Galago moholi@AnAge)

Total mtDNA (size: 16650 bases) GC AT G C A T
Base content (bases) 6819 9831 4665 2154 4464 5367
Base content per 1 kb (bases) 410 590 280 129 268 322
Base content (%) 41.0% 59.0%
Total protein-coding genes (size: 11339 bases) GC AT G C A T
Base content (bases) 4674 6665 3358 1316 3124 3541
Base content per 1 kb (bases) 412 588 296 116 276 312
Base content (%) 41.2% 58.8%
D-loop: No data available for this section.
Total tRNA-coding genes (size: 1512 bases) GC AT G C A T
Base content (bases) 592 920 351 241 398 522
Base content per 1 kb (bases) 392 608 232 159 263 345
Base content (%) 39.2% 60.8%
Total rRNA-coding genes (size: 2531 bases) GC AT G C A T
Base content (bases) 1023 1508 597 426 591 917
Base content per 1 kb (bases) 404 596 236 168 234 362
Base content (%) 40.4% 59.6%
12S rRNA gene (size: 965 bases) GC AT G C A T
Base content (bases) 402 563 231 171 223 340
Base content per 1 kb (bases) 417 583 239 177 231 352
Base content (%) 41.7% 58.3%
16S rRNA gene (size: 1566 bases) GC AT G C A T
Base content (bases) 621 945 366 255 368 577
Base content per 1 kb (bases) 397 603 234 163 235 368
Base content (%) 39.7% 60.3%

ATP6 (size: 681 bases) GC AT G C A T
Base content (bases) 274 407 207 67 197 210
Base content per 1 kb (bases) 402 598 304 98 289 308
Base content (%) 40.2% 59.8%
ATP8 (size: 204 bases) GC AT G C A T
Base content (bases) 69 135 55 14 57 78
Base content per 1 kb (bases) 338 662 270 69 279 382
Base content (%) 33.8% 66.2%
COX1 (size: 1542 bases) GC AT G C A T
Base content (bases) 646 896 387 259 470 426
Base content per 1 kb (bases) 419 581 251 168 305 276
Base content (%) 41.9% 58.1%
COX2 (size: 684 bases) GC AT G C A T
Base content (bases) 287 397 188 99 177 220
Base content per 1 kb (bases) 420 580 275 145 259 322
Base content (%) 42.0% 58.0%
COX3 (size: 784 bases) GC AT G C A T
Base content (bases) 337 447 227 110 220 227
Base content per 1 kb (bases) 430 570 290 140 281 290
Base content (%) 43.0% 57.0%
CYTB (size: 1140 bases) GC AT G C A T
Base content (bases) 505 635 356 149 309 326
Base content per 1 kb (bases) 443 557 312 131 271 286
Base content (%) 44.3% 55.7%
ND1 (size: 955 bases) GC AT G C A T
Base content (bases) 397 558 292 105 258 300
Base content per 1 kb (bases) 416 584 306 110 270 314
Base content (%) 41.6% 58.4%
ND2 (size: 1039 bases) GC AT G C A T
Base content (bases) 407 632 324 83 278 354
Base content per 1 kb (bases) 392 608 312 80 268 341
Base content (%) 39.2% 60.8%
ND3 (size: 347 bases) GC AT G C A T
Base content (bases) 140 207 98 42 102 105
Base content per 1 kb (bases) 403 597 282 121 294 303
Base content (%) 40.3% 59.7%
ND4 (size: 1378 bases) GC AT G C A T
Base content (bases) 550 828 408 142 387 441
Base content per 1 kb (bases) 399 601 296 103 281 320
Base content (%) 39.9% 60.1%
ND4L (size: 297 bases) GC AT G C A T
Base content (bases) 114 183 81 33 94 89
Base content per 1 kb (bases) 384 616 273 111 316 300
Base content (%) 38.4% 61.6%
ND5 (size: 1815 bases) GC AT G C A T
Base content (bases) 740 1075 562 178 493 582
Base content per 1 kb (bases) 408 592 310 98 272 321
Base content (%) 40.8% 59.2%
ND6 (size: 528 bases) GC AT G C A T
Base content (bases) 225 303 187 38 99 204
Base content per 1 kb (bases) 426 574 354 72 188 386
Base content (%) 42.6% 57.4%

ATP6 (size: 681 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 10 (4.42%)
Alanine (Ala, A)
n = 18 (7.96%)
Serine (Ser, S)
n = 13 (5.75%)
Threonine (Thr, T)
n = 29 (12.83%)
Cysteine (Cys, C)
n = 0 (0%)
Valine (Val, V)
n = 9 (3.98%)
Leucine (Leu, L)
n = 46 (20.35%)
Isoleucine (Ile, I)
n = 22 (9.73%)
Methionine (Met, M)
n = 11 (4.87%)
Proline (Pro, P)
n = 15 (6.64%)
Phenylalanine (Phe, F)
n = 11 (4.87%)
Tyrosine (Tyr, Y)
n = 2 (0.88%)
Tryptophan (Trp, W)
n = 3 (1.33%)
Aspartic acid (Asp, D)
n = 1 (0.44%)
Glutamic acid (Glu, E)
n = 2 (0.88%)
Asparagine (Asn, N)
n = 9 (3.98%)
Glutamine (Gln, Q)
n = 9 (3.98%)
Histidine (His, H)
n = 7 (3.1%)
Lysine (Lys, K)
n = 4 (1.77%)
Arginine (Arg, R)
n = 5 (2.21%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
14 8 9 10 11 15 1 9 9 0 2 1 5 1 5 6
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
2 0 0 5 6 7 0 1 3 5 1 9 4 2 0 6
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
8 15 0 1 0 9 0 0 3 0 2 0 0 3 6 4
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
3 2 0 0 1 3 1 2 0 3 0 0 0 1 0 3
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
40 73 78 36
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
21 72 35 99
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
6 62 97 62
ATP8 (size: 204 bases)
Amino acid sequence: MPQLDTSTWTISIISMALTLFTLFQLKFSKFLYPLNPVQKTMKTMKQDNPWEKKWTKTYLPLSLPLQ*
Amino acid frequencies:
Glycine (Gly, G)
n = 0 (0%)
Alanine (Ala, A)
n = 1 (1.49%)
Serine (Ser, S)
n = 5 (7.46%)
Threonine (Thr, T)
n = 9 (13.43%)
Cysteine (Cys, C)
n = 0 (0%)
Valine (Val, V)
n = 1 (1.49%)
Leucine (Leu, L)
n = 11 (16.42%)
Isoleucine (Ile, I)
n = 3 (4.48%)
Methionine (Met, M)
n = 4 (5.97%)
Proline (Pro, P)
n = 6 (8.96%)
Phenylalanine (Phe, F)
n = 4 (5.97%)
Tyrosine (Tyr, Y)
n = 2 (2.99%)
Tryptophan (Trp, W)
n = 3 (4.48%)
Aspartic acid (Asp, D)
n = 2 (2.99%)
Glutamic acid (Glu, E)
n = 1 (1.49%)
Asparagine (Asn, N)
n = 2 (2.99%)
Glutamine (Gln, Q)
n = 5 (7.46%)
Histidine (His, H)
n = 0 (0%)
Lysine (Lys, K)
n = 8 (11.94%)
Arginine (Arg, R)
n = 0 (0%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
2 1 3 2 1 3 0 3 5 0 0 0 0 1 1 3
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
1 0 0 0 1 0 0 0 0 0 0 3 2 1 0 1
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
5 3 0 2 1 2 0 0 0 2 0 0 2 0 2 0
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
0 0 1 1 1 7 1 0 0 0 0 0 0 1 0 3
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
5 17 26 20
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
3 21 21 23
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
6 17 31 14
COX1 (size: 1542 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 47 (9.16%)
Alanine (Ala, A)
n = 41 (7.99%)
Serine (Ser, S)
n = 32 (6.24%)
Threonine (Thr, T)
n = 36 (7.02%)
Cysteine (Cys, C)
n = 1 (0.19%)
Valine (Val, V)
n = 37 (7.21%)
Leucine (Leu, L)
n = 59 (11.5%)
Isoleucine (Ile, I)
n = 39 (7.6%)
Methionine (Met, M)
n = 32 (6.24%)
Proline (Pro, P)
n = 29 (5.65%)
Phenylalanine (Phe, F)
n = 42 (8.19%)
Tyrosine (Tyr, Y)
n = 19 (3.7%)
Tryptophan (Trp, W)
n = 17 (3.31%)
Aspartic acid (Asp, D)
n = 16 (3.12%)
Glutamic acid (Glu, E)
n = 9 (1.75%)
Asparagine (Asn, N)
n = 17 (3.31%)
Glutamine (Gln, Q)
n = 6 (1.17%)
Histidine (His, H)
n = 18 (3.51%)
Lysine (Lys, K)
n = 8 (1.56%)
Arginine (Arg, R)
n = 8 (1.56%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
25 14 25 9 10 23 2 10 5 1 7 11 18 1 19 23
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
7 1 0 9 11 20 1 3 12 25 7 10 7 11 1 10
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
9 17 0 6 11 11 1 1 2 12 7 3 5 4 13 10
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
8 7 2 9 7 7 1 2 2 3 1 0 0 1 0 14
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
150 105 135 124
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
76 135 94 209
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
33 147 197 137
COX2 (size: 684 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 8 (3.52%)
Alanine (Ala, A)
n = 12 (5.29%)
Serine (Ser, S)
n = 15 (6.61%)
Threonine (Thr, T)
n = 20 (8.81%)
Cysteine (Cys, C)
n = 3 (1.32%)
Valine (Val, V)
n = 15 (6.61%)
Leucine (Leu, L)
n = 33 (14.54%)
Isoleucine (Ile, I)
n = 18 (7.93%)
Methionine (Met, M)
n = 13 (5.73%)
Proline (Pro, P)
n = 12 (5.29%)
Phenylalanine (Phe, F)
n = 5 (2.2%)
Tyrosine (Tyr, Y)
n = 13 (5.73%)
Tryptophan (Trp, W)
n = 5 (2.2%)
Aspartic acid (Asp, D)
n = 12 (5.29%)
Glutamic acid (Glu, E)
n = 16 (7.05%)
Asparagine (Asn, N)
n = 3 (1.32%)
Glutamine (Gln, Q)
n = 6 (2.64%)
Histidine (His, H)
n = 7 (3.08%)
Lysine (Lys, K)
n = 5 (2.2%)
Arginine (Arg, R)
n = 6 (2.64%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
10 8 11 8 7 7 1 10 5 1 1 3 10 1 2 3
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
2 2 1 3 4 5 0 1 5 2 0 5 2 5 0 1
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
10 9 0 3 4 4 0 0 4 2 11 0 0 1 2 1
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
6 13 3 4 8 3 2 1 1 4 0 0 0 1 0 5
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
63 54 63 48
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
26 55 63 84
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
10 79 94 45
COX3 (size: 784 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 21 (8.08%)
Alanine (Ala, A)
n = 14 (5.38%)
Serine (Ser, S)
n = 19 (7.31%)
Threonine (Thr, T)
n = 26 (10.0%)
Cysteine (Cys, C)
n = 2 (0.77%)
Valine (Val, V)
n = 12 (4.62%)
Leucine (Leu, L)
n = 34 (13.08%)
Isoleucine (Ile, I)
n = 15 (5.77%)
Methionine (Met, M)
n = 9 (3.46%)
Proline (Pro, P)
n = 12 (4.62%)
Phenylalanine (Phe, F)
n = 25 (9.62%)
Tyrosine (Tyr, Y)
n = 9 (3.46%)
Tryptophan (Trp, W)
n = 12 (4.62%)
Aspartic acid (Asp, D)
n = 3 (1.15%)
Glutamic acid (Glu, E)
n = 8 (3.08%)
Asparagine (Asn, N)
n = 8 (3.08%)
Glutamine (Gln, Q)
n = 7 (2.69%)
Histidine (His, H)
n = 17 (6.54%)
Lysine (Lys, K)
n = 3 (1.15%)
Arginine (Arg, R)
n = 5 (1.92%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
7 8 8 4 7 16 1 5 5 2 1 7 4 0 11 14
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
1 1 1 3 4 6 1 6 5 8 2 0 4 8 0 5
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
10 11 0 0 5 11 0 3 0 3 6 0 1 1 7 8
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
9 8 0 1 2 3 0 0 1 3 1 0 0 0 0 12
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
58 69 64 70
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
43 68 55 95
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
9 90 108 54
CYTB (size: 1140 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 25 (6.6%)
Alanine (Ala, A)
n = 24 (6.33%)
Serine (Ser, S)
n = 28 (7.39%)
Threonine (Thr, T)
n = 25 (6.6%)
Cysteine (Cys, C)
n = 4 (1.06%)
Valine (Val, V)
n = 13 (3.43%)
Leucine (Leu, L)
n = 58 (15.3%)
Isoleucine (Ile, I)
n = 40 (10.55%)
Methionine (Met, M)
n = 14 (3.69%)
Proline (Pro, P)
n = 22 (5.8%)
Phenylalanine (Phe, F)
n = 28 (7.39%)
Tyrosine (Tyr, Y)
n = 15 (3.96%)
Tryptophan (Trp, W)
n = 12 (3.17%)
Aspartic acid (Asp, D)
n = 11 (2.9%)
Glutamic acid (Glu, E)
n = 6 (1.58%)
Asparagine (Asn, N)
n = 17 (4.49%)
Glutamine (Gln, Q)
n = 7 (1.85%)
Histidine (His, H)
n = 12 (3.17%)
Lysine (Lys, K)
n = 10 (2.64%)
Arginine (Arg, R)
n = 8 (2.11%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
16 24 12 8 15 25 4 5 6 1 1 3 9 0 7 21
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
2 0 4 4 13 6 1 1 8 12 4 4 9 8 1 5
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
8 10 2 2 11 12 1 0 2 7 8 0 1 3 14 5
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
7 5 1 1 10 10 0 1 1 6 0 1 0 0 0 12
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
79 101 109 91
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
52 97 78 153
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
18 158 139 65
ND1 (size: 955 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 11 (3.47%)
Alanine (Ala, A)
n = 28 (8.83%)
Serine (Ser, S)
n = 28 (8.83%)
Threonine (Thr, T)
n = 23 (7.26%)
Cysteine (Cys, C)
n = 1 (0.32%)
Valine (Val, V)
n = 11 (3.47%)
Leucine (Leu, L)
n = 57 (17.98%)
Isoleucine (Ile, I)
n = 30 (9.46%)
Methionine (Met, M)
n = 18 (5.68%)
Proline (Pro, P)
n = 20 (6.31%)
Phenylalanine (Phe, F)
n = 19 (5.99%)
Tyrosine (Tyr, Y)
n = 12 (3.79%)
Tryptophan (Trp, W)
n = 9 (2.84%)
Aspartic acid (Asp, D)
n = 3 (0.95%)
Glutamic acid (Glu, E)
n = 11 (3.47%)
Asparagine (Asn, N)
n = 13 (4.1%)
Glutamine (Gln, Q)
n = 7 (2.21%)
Histidine (His, H)
n = 3 (0.95%)
Lysine (Lys, K)
n = 7 (2.21%)
Arginine (Arg, R)
n = 7 (2.21%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
10 20 16 6 9 31 1 9 6 1 1 3 6 1 3 16
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
2 0 1 3 14 11 0 1 1 7 2 2 10 8 0 3
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
12 8 0 2 8 13 1 1 3 7 5 0 1 6 7 0
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
3 11 0 2 1 7 0 0 0 7 0 0 0 0 0 9
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
64 84 95 75
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
32 95 56 135
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
9 113 149 47
ND2 (size: 1039 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 14 (4.06%)
Alanine (Ala, A)
n = 19 (5.51%)
Serine (Ser, S)
n = 30 (8.7%)
Threonine (Thr, T)
n = 42 (12.17%)
Cysteine (Cys, C)
n = 0 (0%)
Valine (Val, V)
n = 7 (2.03%)
Leucine (Leu, L)
n = 62 (17.97%)
Isoleucine (Ile, I)
n = 40 (11.59%)
Methionine (Met, M)
n = 28 (8.12%)
Proline (Pro, P)
n = 20 (5.8%)
Phenylalanine (Phe, F)
n = 15 (4.35%)
Tyrosine (Tyr, Y)
n = 6 (1.74%)
Tryptophan (Trp, W)
n = 10 (2.9%)
Aspartic acid (Asp, D)
n = 2 (0.58%)
Glutamic acid (Glu, E)
n = 4 (1.16%)
Asparagine (Asn, N)
n = 15 (4.35%)
Glutamine (Gln, Q)
n = 11 (3.19%)
Histidine (His, H)
n = 5 (1.45%)
Lysine (Lys, K)
n = 13 (3.77%)
Arginine (Arg, R)
n = 3 (0.87%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
12 28 27 8 19 23 3 9 11 0 0 4 3 0 5 10
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
1 0 0 3 8 8 0 1 5 8 0 5 4 11 0 10
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
15 16 1 5 8 14 0 2 1 2 4 0 0 4 11 0
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
5 4 0 1 1 12 1 0 1 1 1 0 0 0 0 10
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
46 92 141 67
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
30 108 56 152
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
7 124 157 58
ND3 (size: 1039 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 14 (4.06%)
Alanine (Ala, A)
n = 19 (5.51%)
Serine (Ser, S)
n = 30 (8.7%)
Threonine (Thr, T)
n = 42 (12.17%)
Cysteine (Cys, C)
n = 0 (0%)
Valine (Val, V)
n = 7 (2.03%)
Leucine (Leu, L)
n = 62 (17.97%)
Isoleucine (Ile, I)
n = 40 (11.59%)
Methionine (Met, M)
n = 28 (8.12%)
Proline (Pro, P)
n = 20 (5.8%)
Phenylalanine (Phe, F)
n = 15 (4.35%)
Tyrosine (Tyr, Y)
n = 6 (1.74%)
Tryptophan (Trp, W)
n = 10 (2.9%)
Aspartic acid (Asp, D)
n = 2 (0.58%)
Glutamic acid (Glu, E)
n = 4 (1.16%)
Asparagine (Asn, N)
n = 15 (4.35%)
Glutamine (Gln, Q)
n = 11 (3.19%)
Histidine (His, H)
n = 5 (1.45%)
Lysine (Lys, K)
n = 13 (3.77%)
Arginine (Arg, R)
n = 3 (0.87%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
12 28 27 8 19 23 3 9 11 0 0 4 3 0 5 10
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
1 0 0 3 8 8 0 1 5 8 0 5 4 11 0 10
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
15 16 1 5 8 14 0 2 1 2 4 0 0 4 11 0
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
5 4 0 1 1 12 1 0 1 1 1 0 0 0 0 10
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
46 92 141 67
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
30 108 56 152
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
7 124 157 58
ND4 (size: 1378 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 17 (3.71%)
Alanine (Ala, A)
n = 23 (5.02%)
Serine (Ser, S)
n = 42 (9.17%)
Threonine (Thr, T)
n = 47 (10.26%)
Cysteine (Cys, C)
n = 3 (0.66%)
Valine (Val, V)
n = 11 (2.4%)
Leucine (Leu, L)
n = 90 (19.65%)
Isoleucine (Ile, I)
n = 52 (11.35%)
Methionine (Met, M)
n = 26 (5.68%)
Proline (Pro, P)
n = 23 (5.02%)
Phenylalanine (Phe, F)
n = 18 (3.93%)
Tyrosine (Tyr, Y)
n = 19 (4.15%)
Tryptophan (Trp, W)
n = 12 (2.62%)
Aspartic acid (Asp, D)
n = 4 (0.87%)
Glutamic acid (Glu, E)
n = 8 (1.75%)
Asparagine (Asn, N)
n = 19 (4.15%)
Glutamine (Gln, Q)
n = 11 (2.4%)
Histidine (His, H)
n = 12 (2.62%)
Lysine (Lys, K)
n = 12 (2.62%)
Arginine (Arg, R)
n = 10 (2.18%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
25 27 22 10 16 35 9 19 8 3 0 4 6 1 8 10
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
4 1 2 6 8 9 0 0 2 12 3 4 6 13 0 4
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
20 20 3 10 13 9 0 1 9 7 12 1 1 5 14 3
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
9 7 1 1 3 11 1 0 2 8 0 0 0 0 0 11
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
63 126 166 104
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
52 125 85 197
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
27 157 190 85
ND4L (size: 297 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 4 (4.08%)
Alanine (Ala, A)
n = 8 (8.16%)
Serine (Ser, S)
n = 9 (9.18%)
Threonine (Thr, T)
n = 7 (7.14%)
Cysteine (Cys, C)
n = 3 (3.06%)
Valine (Val, V)
n = 6 (6.12%)
Leucine (Leu, L)
n = 22 (22.45%)
Isoleucine (Ile, I)
n = 10 (10.2%)
Methionine (Met, M)
n = 7 (7.14%)
Proline (Pro, P)
n = 2 (2.04%)
Phenylalanine (Phe, F)
n = 4 (4.08%)
Tyrosine (Tyr, Y)
n = 3 (3.06%)
Tryptophan (Trp, W)
n = 0 (0%)
Aspartic acid (Asp, D)
n = 1 (1.02%)
Glutamic acid (Glu, E)
n = 2 (2.04%)
Asparagine (Asn, N)
n = 5 (5.1%)
Glutamine (Gln, Q)
n = 2 (2.04%)
Histidine (His, H)
n = 2 (2.04%)
Lysine (Lys, K)
n = 0 (0%)
Arginine (Arg, R)
n = 1 (1.02%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
2 8 5 3 2 7 1 9 2 0 1 3 2 0 0 4
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
2 0 3 3 3 2 0 1 1 2 0 1 0 1 0 3
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
1 3 0 1 1 6 0 0 1 2 1 0 0 0 5 0
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
2 2 0 0 1 0 0 0 0 1 0 0 0 1 0 0
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
21 20 30 28
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
9 25 16 49
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
3 36 43 17
ND5 (size: 1815 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 28 (4.64%)
Alanine (Ala, A)
n = 37 (6.13%)
Serine (Ser, S)
n = 48 (7.95%)
Threonine (Thr, T)
n = 64 (10.6%)
Cysteine (Cys, C)
n = 4 (0.66%)
Valine (Val, V)
n = 15 (2.48%)
Leucine (Leu, L)
n = 103 (17.05%)
Isoleucine (Ile, I)
n = 55 (9.11%)
Methionine (Met, M)
n = 32 (5.3%)
Proline (Pro, P)
n = 29 (4.8%)
Phenylalanine (Phe, F)
n = 40 (6.62%)
Tyrosine (Tyr, Y)
n = 16 (2.65%)
Tryptophan (Trp, W)
n = 12 (1.99%)
Aspartic acid (Asp, D)
n = 13 (2.15%)
Glutamic acid (Glu, E)
n = 9 (1.49%)
Asparagine (Asn, N)
n = 40 (6.62%)
Glutamine (Gln, Q)
n = 18 (2.98%)
Histidine (His, H)
n = 11 (1.82%)
Lysine (Lys, K)
n = 21 (3.48%)
Arginine (Arg, R)
n = 9 (1.49%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
21 34 28 18 16 48 2 18 16 2 3 4 7 1 9 31
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
4 1 3 5 21 11 0 4 12 12 0 8 7 14 0 16
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
26 21 1 7 17 16 0 1 7 7 9 2 1 10 30 0
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
11 8 1 3 10 20 1 3 3 3 0 0 0 1 0 10
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
102 151 220 132
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
61 170 129 245
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
15 241 233 116
ND6 (size: 528 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 31 (17.71%)
Alanine (Ala, A)
n = 6 (3.43%)
Serine (Ser, S)
n = 11 (6.29%)
Threonine (Thr, T)
n = 6 (3.43%)
Cysteine (Cys, C)
n = 2 (1.14%)
Valine (Val, V)
n = 25 (14.29%)
Leucine (Leu, L)
n = 17 (9.71%)
Isoleucine (Ile, I)
n = 9 (5.14%)
Methionine (Met, M)
n = 17 (9.71%)
Proline (Pro, P)
n = 4 (2.29%)
Phenylalanine (Phe, F)
n = 14 (8.0%)
Tyrosine (Tyr, Y)
n = 9 (5.14%)
Tryptophan (Trp, W)
n = 5 (2.86%)
Aspartic acid (Asp, D)
n = 3 (1.71%)
Glutamic acid (Glu, E)
n = 8 (4.57%)
Asparagine (Asn, N)
n = 4 (2.29%)
Glutamine (Gln, Q)
n = 1 (0.57%)
Histidine (His, H)
n = 0 (0%)
Lysine (Lys, K)
n = 1 (0.57%)
Arginine (Arg, R)
n = 2 (1.14%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
8 1 6 0 0 0 0 6 0 1 6 2 5 12 13 1
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
11 2 0 5 0 0 1 6 2 6 17 1 0 0 3 3
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
0 1 2 4 0 2 1 3 1 8 1 3 11 4 0 0
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
0 1 7 3 0 1 0 1 0 0 1 0 0 1 0 2
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
73 7 41 55
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
44 23 27 82
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
70 8 31 67
Total protein-coding genes (size: 11394 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 220 (5.8%)
Alanine (Ala, A)
n = 239 (6.3%)
Serine (Ser, S)
n = 284 (7.48%)
Threonine (Thr, T)
n = 344 (9.06%)
Cysteine (Cys, C)
n = 24 (0.63%)
Valine (Val, V)
n = 167 (4.4%)
Leucine (Leu, L)
n = 619 (16.31%)
Isoleucine (Ile, I)
n = 341 (8.99%)
Methionine (Met, M)
n = 217 (5.72%)
Proline (Pro, P)
n = 200 (5.27%)
Phenylalanine (Phe, F)
n = 232 (6.11%)
Tyrosine (Tyr, Y)
n = 129 (3.4%)
Tryptophan (Trp, W)
n = 104 (2.74%)
Aspartic acid (Asp, D)
n = 73 (1.92%)
Glutamic acid (Glu, E)
n = 91 (2.4%)
Asparagine (Asn, N)
n = 156 (4.11%)
Glutamine (Gln, Q)
n = 93 (2.45%)
Histidine (His, H)
n = 95 (2.5%)
Lysine (Lys, K)
n = 95 (2.5%)
Arginine (Arg, R)
n = 65 (1.71%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
155 186 178 93 117 240 27 117 81 12 23 48 77 19 85 147
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
39 8 16 49 100 86 4 25 58 101 36 54 57 84 5 68
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
126 140 10 44 80 111 4 12 33 61 68 9 25 42 114 31
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
64 75 16 27 46 86 9 11 11 39 4 1 0 7 0 95
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
790 930 1199 877
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
459 1022 739 1576
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
219 1271 1518 788 

Error: F​a​i​l​e​d​ t​o​ u​n​d​e​r​s​t​a​n​d​ i​d​:​ ?​t​e​r​m​=​(​"​G​a​l​a​g​o​
F​a​i​l​e​d​ t​o​ u​n​d​e​r​s​t​a​n​d​ i​d​:​ m​o​h​o​l​i​"​[​O​r​g​a​n​i​s​m​]​)​
F​a​i​l​e​d​ t​o​ u​n​d​e​r​s​t​a​n​d​ i​d​:​ A​N​D​
F​a​i​l​e​d​ t​o​ u​n​d​e​r​s​t​a​n​d​ i​d​:​ (​r​e​f​s​e​q​[​f​i​l​t​e​r​]​
F​a​i​l​e​d​ t​o​ u​n​d​e​r​s​t​a​n​d​ i​d​:​ A​N​D​
F​a​i​l​e​d​ t​o​ u​n​d​e​r​s​t​a​n​d​ i​d​:​ m​i​t​o​c​h​o​n​d​r​i​o​n​[​f​i​l​t​e​r​]​)​
Contact: Vadim E. Fraifeld, MD, PhD

Head: Lab for the Biology of Aging, The Shraga Segal Department of Microbiology, Immunology and Genetics, Faculty of Health Sciences, Ben-Gurion University of the Negev
P.O. Box 653, Beer-Sheva 8410501, Israel

Email:
How to cite us:

If you would like to cite this database please use:
Toren D, Barzilay T, Tacutu R, Lehmann G, Muradian KK, Fraifeld VE. MitoAge: a database for comparative analysis of mitochondrial DNA, with a special focus on animal longevity. Nucleic Acids Res. 2016; 44(D1):D1262-5.