Viewing data for Rattus rattus
| Scientific name | Rattus rattus |
| Common name | Rat |
| Maximum lifespan | 4.20 years (Rattus rattus@AnAge) |
| Total mtDNA (size: 16305 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 6212 | 10093 | 4162 | 2050 | 4547 | 5546 |
| Base content per 1 kb (bases) | 381 | 619 | 255 | 126 | 279 | 340 |
| Base content (%) | 38.1% | 61.9% | ||||
| Total protein-coding genes (size: 11330 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 4419 | 6911 | 3123 | 1296 | 3203 | 3708 |
| Base content per 1 kb (bases) | 390 | 610 | 276 | 114 | 283 | 327 |
| Base content (%) | 39.0% | 61.0% | ||||
| D-loop (size: 898 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 316 | 582 | 218 | 98 | 266 | 316 |
| Base content per 1 kb (bases) | 352 | 648 | 243 | 109 | 296 | 352 |
| Base content (%) | 35.2% | 64.8% | ||||
| Total tRNA-coding genes (size: 1496 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 526 | 970 | 301 | 225 | 424 | 546 |
| Base content per 1 kb (bases) | 352 | 648 | 201 | 150 | 283 | 365 |
| Base content (%) | 35.2% | 64.8% | ||||
| Total rRNA-coding genes (size: 2525 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 926 | 1599 | 506 | 420 | 638 | 961 |
| Base content per 1 kb (bases) | 367 | 633 | 200 | 166 | 253 | 381 |
| Base content (%) | 36.7% | 63.3% | ||||
| 12S rRNA gene (size: 956 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 366 | 590 | 203 | 163 | 238 | 352 |
| Base content per 1 kb (bases) | 383 | 617 | 212 | 171 | 249 | 368 |
| Base content (%) | 38.3% | 61.7% | ||||
| 16S rRNA gene (size: 1569 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 560 | 1009 | 303 | 257 | 400 | 609 |
| Base content per 1 kb (bases) | 357 | 643 | 193 | 164 | 255 | 388 |
| Base content (%) | 35.7% | 64.3% | ||||
| ATP6 (size: 681 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 258 | 423 | 184 | 74 | 206 | 217 |
| Base content per 1 kb (bases) | 379 | 621 | 270 | 109 | 302 | 319 |
| Base content (%) | 37.9% | 62.1% | ||||
| ATP8 (size: 204 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 71 | 133 | 58 | 13 | 56 | 77 |
| Base content per 1 kb (bases) | 348 | 652 | 284 | 64 | 275 | 377 |
| Base content (%) | 34.8% | 65.2% | ||||
| COX1 (size: 1545 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 640 | 905 | 384 | 256 | 476 | 429 |
| Base content per 1 kb (bases) | 414 | 586 | 249 | 166 | 308 | 278 |
| Base content (%) | 41.4% | 58.6% | ||||
| COX2 (size: 684 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 270 | 414 | 179 | 91 | 181 | 233 |
| Base content per 1 kb (bases) | 395 | 605 | 262 | 133 | 265 | 341 |
| Base content (%) | 39.5% | 60.5% | ||||
| COX3 (size: 784 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 318 | 466 | 211 | 107 | 226 | 240 |
| Base content per 1 kb (bases) | 406 | 594 | 269 | 136 | 288 | 306 |
| Base content (%) | 40.6% | 59.4% | ||||
| CYTB (size: 1143 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 459 | 684 | 319 | 140 | 327 | 357 |
| Base content per 1 kb (bases) | 402 | 598 | 279 | 122 | 286 | 312 |
| Base content (%) | 40.2% | 59.8% | ||||
| ND1 (size: 955 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 410 | 545 | 294 | 116 | 257 | 288 |
| Base content per 1 kb (bases) | 429 | 571 | 308 | 121 | 269 | 302 |
| Base content (%) | 42.9% | 57.1% | ||||
| ND2 (size: 1036 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 391 | 645 | 304 | 87 | 274 | 371 |
| Base content per 1 kb (bases) | 377 | 623 | 293 | 84 | 264 | 358 |
| Base content (%) | 37.7% | 62.3% | ||||
| ND3 (size: 348 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 138 | 210 | 99 | 39 | 102 | 108 |
| Base content per 1 kb (bases) | 397 | 603 | 284 | 112 | 293 | 310 |
| Base content (%) | 39.7% | 60.3% | ||||
| ND4 (size: 1378 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 521 | 857 | 381 | 140 | 381 | 476 |
| Base content per 1 kb (bases) | 378 | 622 | 276 | 102 | 276 | 345 |
| Base content (%) | 37.8% | 62.2% | ||||
| ND4L (size: 297 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 111 | 186 | 81 | 30 | 95 | 91 |
| Base content per 1 kb (bases) | 374 | 626 | 273 | 101 | 320 | 306 |
| Base content (%) | 37.4% | 62.6% | ||||
| ND5 (size: 1830 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 681 | 1149 | 504 | 177 | 532 | 617 |
| Base content per 1 kb (bases) | 372 | 628 | 275 | 97 | 291 | 337 |
| Base content (%) | 37.2% | 62.8% | ||||
| ND6 (size: 519 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 175 | 344 | 141 | 34 | 113 | 231 |
| Base content per 1 kb (bases) | 337 | 663 | 272 | 66 | 218 | 445 |
| Base content (%) | 33.7% | 66.3% | ||||
| ATP6 (size: 681 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
Amino acid frequencies:
Glycine (Gly, G)
n = 10 (4.42%) 
Alanine (Ala, A)
n = 16 (7.08%) 
Serine (Ser, S)
n = 15 (6.64%) 
Threonine (Thr, T)
n = 21 (9.29%) 
Cysteine (Cys, C)
n = 0 (0%) 
Valine (Val, V)
n = 10 (4.42%) 
Leucine (Leu, L)
n = 42 (18.58%) 
Isoleucine (Ile, I)
n = 28 (12.39%) 
Methionine (Met, M)
n = 14 (6.19%) 
Proline (Pro, P)
n = 14 (6.19%) 
Phenylalanine (Phe, F)
n = 13 (5.75%) 
Tyrosine (Tyr, Y)
n = 2 (0.88%) 
Tryptophan (Trp, W)
n = 3 (1.33%) 
Aspartic acid (Asp, D)
n = 1 (0.44%) 
Glutamic acid (Glu, E)
n = 4 (1.77%) 
Asparagine (Asn, N)
n = 8 (3.54%) 
Glutamine (Gln, Q)
n = 6 (2.65%) 
Histidine (His, H)
n = 9 (3.98%) 
Lysine (Lys, K)
n = 5 (2.21%) 
Arginine (Arg, R)
n = 5 (2.21%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 17 | 11 | 11 | 9 | 5 | 18 | 0 | 8 | 6 | 0 | 1 | 1 | 8 | 0 | 6 | 7 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 3 | 0 | 0 | 5 | 5 | 6 | 0 | 2 | 3 | 5 | 0 | 2 | 4 | 8 | 0 | 6 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 4 | 10 | 1 | 3 | 0 | 6 | 0 | 1 | 5 | 1 | 1 | 0 | 2 | 4 | 4 | 3 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 6 | 4 | 0 | 1 | 0 | 3 | 2 | 0 | 2 | 2 | 1 | 0 | 0 | 1 | 0 | 3 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 41 | 66 | 82 | 38 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 24 | 60 | 36 | 107 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 9 | 58 | 99 | 61 | ||||||||||||
| ATP8 (size: 204 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: MPQLDTSTWFITIISSMITLFILFQLKISSQTFPTAPSPKIMATEKTSNPWESKWTKIYLPLSLPQQ* | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 0 (0%)
Alanine (Ala, A)
n = 2 (2.99%)
Serine (Ser, S)
n = 9 (13.43%)
Threonine (Thr, T)
n = 9 (13.43%)
Cysteine (Cys, C)
n = 0 (0%)
Valine (Val, V)
n = 0 (0%)
Leucine (Leu, L)
n = 7 (10.45%)
Isoleucine (Ile, I)
n = 8 (11.94%)
Methionine (Met, M)
n = 3 (4.48%)
Proline (Pro, P)
n = 7 (10.45%)
Phenylalanine (Phe, F)
n = 4 (5.97%)
Tyrosine (Tyr, Y)
n = 1 (1.49%)
Tryptophan (Trp, W)
n = 3 (4.48%)
Aspartic acid (Asp, D)
n = 1 (1.49%)
Glutamic acid (Glu, E)
n = 2 (2.99%)
Asparagine (Asn, N)
n = 1 (1.49%)
Glutamine (Gln, Q)
n = 5 (7.46%)
Histidine (His, H)
n = 0 (0%)
Lysine (Lys, K)
n = 5 (7.46%)
Arginine (Arg, R)
n = 0 (0%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 4 | 4 | 2 | 1 | 0 | 2 | 0 | 3 | 4 | 1 | 0 | 0 | 0 | 0 | 3 | 1 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 1 | 0 | 0 | 0 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 3 | 3 | 1 | 0 | 0 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 1 | 7 | 1 | 1 | 3 | 4 | 0 | 0 | 1 | 1 | 0 | 0 | 1 | 0 | 1 | 0 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 0 | 2 | 0 | 0 | 1 | 5 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 3 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 5 | 15 | 27 | 21 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 4 | 26 | 16 | 22 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 4 | 17 | 34 | 13 | ||||||||||||
| COX1 (size: 1545 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 46 (8.95%)
Alanine (Ala, A)
n = 42 (8.17%)
Serine (Ser, S)
n = 35 (6.81%)
Threonine (Thr, T)
n = 35 (6.81%)
Cysteine (Cys, C)
n = 1 (0.19%)
Valine (Val, V)
n = 40 (7.78%)
Leucine (Leu, L)
n = 59 (11.48%)
Isoleucine (Ile, I)
n = 36 (7.0%)
Methionine (Met, M)
n = 30 (5.84%)
Proline (Pro, P)
n = 28 (5.45%)
Phenylalanine (Phe, F)
n = 42 (8.17%)
Tyrosine (Tyr, Y)
n = 20 (3.89%)
Tryptophan (Trp, W)
n = 17 (3.31%)
Aspartic acid (Asp, D)
n = 16 (3.11%)
Glutamic acid (Glu, E)
n = 9 (1.75%)
Asparagine (Asn, N)
n = 16 (3.11%)
Glutamine (Gln, Q)
n = 6 (1.17%)
Histidine (His, H)
n = 18 (3.5%)
Lysine (Lys, K)
n = 10 (1.95%)
Arginine (Arg, R)
n = 8 (1.56%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 20 | 16 | 24 | 12 | 12 | 21 | 1 | 11 | 5 | 1 | 6 | 7 | 22 | 5 | 22 | 20 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 6 | 1 | 0 | 11 | 20 | 11 | 0 | 6 | 8 | 26 | 6 | 13 | 3 | 11 | 1 | 4 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 11 | 19 | 1 | 11 | 7 | 14 | 0 | 1 | 2 | 10 | 10 | 2 | 2 | 6 | 10 | 7 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 11 | 7 | 2 | 12 | 4 | 9 | 1 | 1 | 0 | 7 | 0 | 0 | 0 | 1 | 0 | 15 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 153 | 106 | 130 | 126 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 75 | 137 | 96 | 207 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 28 | 141 | 203 | 143 | ||||||||||||
| COX2 (size: 684 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 8 (3.52%)
Alanine (Ala, A)
n = 9 (3.96%)
Serine (Ser, S)
n = 18 (7.93%)
Threonine (Thr, T)
n = 16 (7.05%)
Cysteine (Cys, C)
n = 3 (1.32%)
Valine (Val, V)
n = 14 (6.17%)
Leucine (Leu, L)
n = 32 (14.1%)
Isoleucine (Ile, I)
n = 19 (8.37%)
Methionine (Met, M)
n = 15 (6.61%)
Proline (Pro, P)
n = 14 (6.17%)
Phenylalanine (Phe, F)
n = 7 (3.08%)
Tyrosine (Tyr, Y)
n = 9 (3.96%)
Tryptophan (Trp, W)
n = 5 (2.2%)
Aspartic acid (Asp, D)
n = 11 (4.85%)
Glutamic acid (Glu, E)
n = 14 (6.17%)
Asparagine (Asn, N)
n = 9 (3.96%)
Glutamine (Gln, Q)
n = 6 (2.64%)
Histidine (His, H)
n = 7 (3.08%)
Lysine (Lys, K)
n = 5 (2.2%)
Arginine (Arg, R)
n = 6 (2.64%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 8 | 11 | 13 | 7 | 2 | 16 | 0 | 7 | 6 | 0 | 3 | 2 | 5 | 4 | 2 | 5 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 2 | 1 | 2 | 5 | 3 | 1 | 0 | 2 | 4 | 1 | 1 | 3 | 2 | 9 | 0 | 1 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 4 | 11 | 0 | 2 | 4 | 8 | 0 | 1 | 3 | 2 | 7 | 1 | 0 | 4 | 5 | 2 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 5 | 13 | 1 | 2 | 9 | 5 | 0 | 3 | 0 | 3 | 0 | 0 | 0 | 1 | 0 | 4 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 56 | 58 | 68 | 46 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 26 | 53 | 62 | 87 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 9 | 68 | 103 | 48 | ||||||||||||
| COX3 (size: 784 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 21 (8.08%)
Alanine (Ala, A)
n = 14 (5.38%)
Serine (Ser, S)
n = 21 (8.08%)
Threonine (Thr, T)
n = 21 (8.08%)
Cysteine (Cys, C)
n = 2 (0.77%)
Valine (Val, V)
n = 14 (5.38%)
Leucine (Leu, L)
n = 35 (13.46%)
Isoleucine (Ile, I)
n = 18 (6.92%)
Methionine (Met, M)
n = 9 (3.46%)
Proline (Pro, P)
n = 10 (3.85%)
Phenylalanine (Phe, F)
n = 21 (8.08%)
Tyrosine (Tyr, Y)
n = 12 (4.62%)
Tryptophan (Trp, W)
n = 12 (4.62%)
Aspartic acid (Asp, D)
n = 4 (1.54%)
Glutamic acid (Glu, E)
n = 7 (2.69%)
Asparagine (Asn, N)
n = 8 (3.08%)
Glutamine (Gln, Q)
n = 7 (2.69%)
Histidine (His, H)
n = 17 (6.54%)
Lysine (Lys, K)
n = 3 (1.15%)
Arginine (Arg, R)
n = 5 (1.92%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 8 | 10 | 7 | 6 | 4 | 20 | 0 | 4 | 7 | 0 | 4 | 2 | 8 | 0 | 10 | 11 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 2 | 1 | 1 | 2 | 3 | 9 | 0 | 3 | 6 | 11 | 1 | 2 | 4 | 4 | 0 | 3 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 6 | 12 | 0 | 3 | 3 | 12 | 0 | 0 | 3 | 6 | 6 | 0 | 1 | 3 | 5 | 6 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 11 | 7 | 0 | 1 | 3 | 3 | 0 | 0 | 1 | 4 | 0 | 0 | 0 | 0 | 0 | 12 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 60 | 69 | 62 | 70 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 43 | 63 | 58 | 97 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 4 | 79 | 120 | 58 | ||||||||||||
| CYTB (size: 1143 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 25 (6.58%)
Alanine (Ala, A)
n = 23 (6.05%)
Serine (Ser, S)
n = 24 (6.32%)
Threonine (Thr, T)
n = 25 (6.58%)
Cysteine (Cys, C)
n = 3 (0.79%)
Valine (Val, V)
n = 18 (4.74%)
Leucine (Leu, L)
n = 55 (14.47%)
Isoleucine (Ile, I)
n = 44 (11.58%)
Methionine (Met, M)
n = 12 (3.16%)
Proline (Pro, P)
n = 22 (5.79%)
Phenylalanine (Phe, F)
n = 31 (8.16%)
Tyrosine (Tyr, Y)
n = 15 (3.95%)
Tryptophan (Trp, W)
n = 12 (3.16%)
Aspartic acid (Asp, D)
n = 11 (2.89%)
Glutamic acid (Glu, E)
n = 6 (1.58%)
Asparagine (Asn, N)
n = 17 (4.47%)
Glutamine (Gln, Q)
n = 6 (1.58%)
Histidine (His, H)
n = 13 (3.42%)
Lysine (Lys, K)
n = 10 (2.63%)
Arginine (Arg, R)
n = 8 (2.11%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 24 | 20 | 10 | 6 | 8 | 25 | 0 | 16 | 6 | 0 | 2 | 3 | 13 | 0 | 10 | 21 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 2 | 0 | 3 | 2 | 11 | 10 | 0 | 1 | 7 | 14 | 3 | 2 | 4 | 16 | 0 | 4 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 7 | 14 | 0 | 2 | 7 | 13 | 0 | 2 | 0 | 2 | 13 | 1 | 0 | 3 | 14 | 6 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 7 | 6 | 0 | 0 | 11 | 9 | 1 | 1 | 3 | 4 | 0 | 0 | 0 | 1 | 0 | 11 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 83 | 88 | 110 | 100 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 50 | 92 | 79 | 160 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 7 | 139 | 168 | 67 | ||||||||||||
| ND1 (size: 955 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 12 (3.79%)
Alanine (Ala, A)
n = 25 (7.89%)
Serine (Ser, S)
n = 27 (8.52%)
Threonine (Thr, T)
n = 21 (6.62%)
Cysteine (Cys, C)
n = 1 (0.32%)
Valine (Val, V)
n = 12 (3.79%)
Leucine (Leu, L)
n = 57 (17.98%)
Isoleucine (Ile, I)
n = 28 (8.83%)
Methionine (Met, M)
n = 19 (5.99%)
Proline (Pro, P)
n = 22 (6.94%)
Phenylalanine (Phe, F)
n = 18 (5.68%)
Tyrosine (Tyr, Y)
n = 15 (4.73%)
Tryptophan (Trp, W)
n = 9 (2.84%)
Aspartic acid (Asp, D)
n = 3 (0.95%)
Glutamic acid (Glu, E)
n = 12 (3.79%)
Asparagine (Asn, N)
n = 12 (3.79%)
Glutamine (Gln, Q)
n = 6 (1.89%)
Histidine (His, H)
n = 5 (1.58%)
Lysine (Lys, K)
n = 6 (1.89%)
Arginine (Arg, R)
n = 8 (2.52%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 13 | 15 | 17 | 2 | 10 | 32 | 4 | 8 | 6 | 0 | 2 | 4 | 4 | 2 | 8 | 10 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 2 | 1 | 0 | 1 | 16 | 7 | 1 | 2 | 4 | 6 | 0 | 5 | 6 | 9 | 2 | 2 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 8 | 10 | 1 | 1 | 9 | 12 | 1 | 1 | 3 | 3 | 12 | 1 | 1 | 3 | 9 | 2 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 3 | 11 | 1 | 1 | 2 | 5 | 1 | 0 | 3 | 4 | 1 | 0 | 0 | 0 | 0 | 8 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 64 | 89 | 90 | 75 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 34 | 91 | 59 | 134 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 18 | 114 | 139 | 47 | ||||||||||||
| ND2 (size: 1036 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 13 (3.78%)
Alanine (Ala, A)
n = 21 (6.1%)
Serine (Ser, S)
n = 32 (9.3%)
Threonine (Thr, T)
n = 35 (10.17%)
Cysteine (Cys, C)
n = 1 (0.29%)
Valine (Val, V)
n = 6 (1.74%)
Leucine (Leu, L)
n = 63 (18.31%)
Isoleucine (Ile, I)
n = 37 (10.76%)
Methionine (Met, M)
n = 27 (7.85%)
Proline (Pro, P)
n = 20 (5.81%)
Phenylalanine (Phe, F)
n = 12 (3.49%)
Tyrosine (Tyr, Y)
n = 11 (3.2%)
Tryptophan (Trp, W)
n = 8 (2.33%)
Aspartic acid (Asp, D)
n = 1 (0.29%)
Glutamic acid (Glu, E)
n = 4 (1.16%)
Asparagine (Asn, N)
n = 21 (6.1%)
Glutamine (Gln, Q)
n = 12 (3.49%)
Histidine (His, H)
n = 6 (1.74%)
Lysine (Lys, K)
n = 12 (3.49%)
Arginine (Arg, R)
n = 3 (0.87%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 16 | 21 | 23 | 5 | 15 | 30 | 1 | 12 | 12 | 0 | 0 | 3 | 2 | 1 | 5 | 7 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 4 | 0 | 1 | 4 | 7 | 10 | 0 | 0 | 1 | 9 | 3 | 5 | 5 | 10 | 0 | 5 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 12 | 17 | 1 | 3 | 7 | 17 | 0 | 3 | 2 | 5 | 6 | 0 | 0 | 5 | 16 | 1 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 5 | 4 | 0 | 0 | 1 | 11 | 1 | 0 | 0 | 2 | 1 | 0 | 0 | 0 | 0 | 8 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 45 | 92 | 137 | 71 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 30 | 103 | 67 | 145 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 12 | 109 | 167 | 57 | ||||||||||||
| ND3 (size: 1036 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 13 (3.78%)
Alanine (Ala, A)
n = 21 (6.1%)
Serine (Ser, S)
n = 32 (9.3%)
Threonine (Thr, T)
n = 35 (10.17%)
Cysteine (Cys, C)
n = 1 (0.29%)
Valine (Val, V)
n = 6 (1.74%)
Leucine (Leu, L)
n = 63 (18.31%)
Isoleucine (Ile, I)
n = 37 (10.76%)
Methionine (Met, M)
n = 27 (7.85%)
Proline (Pro, P)
n = 20 (5.81%)
Phenylalanine (Phe, F)
n = 12 (3.49%)
Tyrosine (Tyr, Y)
n = 11 (3.2%)
Tryptophan (Trp, W)
n = 8 (2.33%)
Aspartic acid (Asp, D)
n = 1 (0.29%)
Glutamic acid (Glu, E)
n = 4 (1.16%)
Asparagine (Asn, N)
n = 21 (6.1%)
Glutamine (Gln, Q)
n = 12 (3.49%)
Histidine (His, H)
n = 6 (1.74%)
Lysine (Lys, K)
n = 12 (3.49%)
Arginine (Arg, R)
n = 3 (0.87%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 16 | 21 | 23 | 5 | 15 | 30 | 1 | 12 | 12 | 0 | 0 | 3 | 2 | 1 | 5 | 7 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 4 | 0 | 1 | 4 | 7 | 10 | 0 | 0 | 1 | 9 | 3 | 5 | 5 | 10 | 0 | 5 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 12 | 17 | 1 | 3 | 7 | 17 | 0 | 3 | 2 | 5 | 6 | 0 | 0 | 5 | 16 | 1 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 5 | 4 | 0 | 0 | 1 | 11 | 1 | 0 | 0 | 2 | 1 | 0 | 0 | 0 | 0 | 8 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 45 | 92 | 137 | 71 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 30 | 103 | 67 | 145 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 12 | 109 | 167 | 57 | ||||||||||||
| ND4 (size: 1378 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 17 (3.71%)
Alanine (Ala, A)
n = 29 (6.33%)
Serine (Ser, S)
n = 42 (9.17%)
Threonine (Thr, T)
n = 39 (8.52%)
Cysteine (Cys, C)
n = 3 (0.66%)
Valine (Val, V)
n = 10 (2.18%)
Leucine (Leu, L)
n = 84 (18.34%)
Isoleucine (Ile, I)
n = 49 (10.7%)
Methionine (Met, M)
n = 40 (8.73%)
Proline (Pro, P)
n = 24 (5.24%)
Phenylalanine (Phe, F)
n = 17 (3.71%)
Tyrosine (Tyr, Y)
n = 13 (2.84%)
Tryptophan (Trp, W)
n = 13 (2.84%)
Aspartic acid (Asp, D)
n = 4 (0.87%)
Glutamic acid (Glu, E)
n = 9 (1.97%)
Asparagine (Asn, N)
n = 22 (4.8%)
Glutamine (Gln, Q)
n = 12 (2.62%)
Histidine (His, H)
n = 10 (2.18%)
Lysine (Lys, K)
n = 13 (2.84%)
Arginine (Arg, R)
n = 9 (1.97%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 23 | 26 | 32 | 13 | 13 | 35 | 1 | 20 | 11 | 1 | 2 | 5 | 3 | 0 | 6 | 11 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 8 | 0 | 3 | 5 | 9 | 15 | 0 | 3 | 5 | 9 | 0 | 1 | 9 | 13 | 1 | 7 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 7 | 25 | 0 | 3 | 11 | 14 | 2 | 2 | 10 | 5 | 8 | 0 | 2 | 7 | 15 | 4 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 6 | 8 | 1 | 0 | 4 | 12 | 1 | 1 | 0 | 8 | 0 | 0 | 0 | 0 | 0 | 13 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 69 | 117 | 175 | 98 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 54 | 122 | 83 | 200 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 17 | 142 | 218 | 82 | ||||||||||||
| ND4L (size: 297 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 4 (4.08%)
Alanine (Ala, A)
n = 7 (7.14%)
Serine (Ser, S)
n = 11 (11.22%)
Threonine (Thr, T)
n = 11 (11.22%)
Cysteine (Cys, C)
n = 3 (3.06%)
Valine (Val, V)
n = 4 (4.08%)
Leucine (Leu, L)
n = 19 (19.39%)
Isoleucine (Ile, I)
n = 6 (6.12%)
Methionine (Met, M)
n = 10 (10.2%)
Proline (Pro, P)
n = 1 (1.02%)
Phenylalanine (Phe, F)
n = 6 (6.12%)
Tyrosine (Tyr, Y)
n = 2 (2.04%)
Tryptophan (Trp, W)
n = 0 (0%)
Aspartic acid (Asp, D)
n = 1 (1.02%)
Glutamic acid (Glu, E)
n = 2 (2.04%)
Asparagine (Asn, N)
n = 6 (6.12%)
Glutamine (Gln, Q)
n = 2 (2.04%)
Histidine (His, H)
n = 1 (1.02%)
Lysine (Lys, K)
n = 1 (1.02%)
Arginine (Arg, R)
n = 1 (1.02%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 2 | 4 | 8 | 1 | 3 | 7 | 2 | 6 | 2 | 0 | 0 | 1 | 3 | 0 | 3 | 3 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 2 | 0 | 3 | 2 | 2 | 3 | 0 | 1 | 1 | 2 | 0 | 0 | 1 | 0 | 0 | 3 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 4 | 4 | 0 | 4 | 5 | 2 | 0 | 0 | 0 | 2 | 0 | 0 | 0 | 2 | 4 | 0 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 1 | 2 | 0 | 1 | 0 | 1 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 1 | 0 | 0 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 18 | 18 | 34 | 29 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 8 | 30 | 16 | 45 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 4 | 33 | 41 | 21 | ||||||||||||
| ND5 (size: 1830 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 25 (4.11%)
Alanine (Ala, A)
n = 33 (5.42%)
Serine (Ser, S)
n = 54 (8.87%)
Threonine (Thr, T)
n = 59 (9.69%)
Cysteine (Cys, C)
n = 7 (1.15%)
Valine (Val, V)
n = 16 (2.63%)
Leucine (Leu, L)
n = 92 (15.11%)
Isoleucine (Ile, I)
n = 66 (10.84%)
Methionine (Met, M)
n = 40 (6.57%)
Proline (Pro, P)
n = 25 (4.11%)
Phenylalanine (Phe, F)
n = 41 (6.73%)
Tyrosine (Tyr, Y)
n = 19 (3.12%)
Tryptophan (Trp, W)
n = 14 (2.3%)
Aspartic acid (Asp, D)
n = 10 (1.64%)
Glutamic acid (Glu, E)
n = 10 (1.64%)
Asparagine (Asn, N)
n = 39 (6.4%)
Glutamine (Gln, Q)
n = 15 (2.46%)
Histidine (His, H)
n = 11 (1.81%)
Lysine (Lys, K)
n = 24 (3.94%)
Arginine (Arg, R)
n = 9 (1.48%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 33 | 33 | 35 | 11 | 20 | 44 | 2 | 14 | 13 | 2 | 4 | 4 | 7 | 1 | 20 | 21 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 5 | 0 | 7 | 6 | 16 | 11 | 0 | 2 | 6 | 16 | 1 | 4 | 6 | 15 | 0 | 13 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 22 | 23 | 1 | 10 | 12 | 22 | 0 | 1 | 9 | 7 | 12 | 1 | 1 | 13 | 26 | 7 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 4 | 9 | 1 | 2 | 8 | 21 | 3 | 3 | 0 | 6 | 0 | 0 | 0 | 1 | 0 | 13 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 94 | 137 | 238 | 141 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 65 | 161 | 129 | 255 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 18 | 206 | 250 | 136 | ||||||||||||
| ND6 (size: 519 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 24 (13.95%)
Alanine (Ala, A)
n = 7 (4.07%)
Serine (Ser, S)
n = 9 (5.23%)
Threonine (Thr, T)
n = 8 (4.65%)
Cysteine (Cys, C)
n = 4 (2.33%)
Valine (Val, V)
n = 15 (8.72%)
Leucine (Leu, L)
n = 26 (15.12%)
Isoleucine (Ile, I)
n = 13 (7.56%)
Methionine (Met, M)
n = 13 (7.56%)
Proline (Pro, P)
n = 3 (1.74%)
Phenylalanine (Phe, F)
n = 16 (9.3%)
Tyrosine (Tyr, Y)
n = 8 (4.65%)
Tryptophan (Trp, W)
n = 5 (2.91%)
Aspartic acid (Asp, D)
n = 6 (3.49%)
Glutamic acid (Glu, E)
n = 8 (4.65%)
Asparagine (Asn, N)
n = 4 (2.33%)
Glutamine (Gln, Q)
n = 0 (0%)
Histidine (His, H)
n = 0 (0%)
Lysine (Lys, K)
n = 2 (1.16%)
Arginine (Arg, R)
n = 1 (0.58%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 12 | 1 | 5 | 2 | 0 | 1 | 0 | 12 | 0 | 0 | 7 | 1 | 4 | 3 | 16 | 0 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 8 | 4 | 0 | 4 | 0 | 2 | 1 | 12 | 1 | 4 | 7 | 2 | 0 | 1 | 0 | 5 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 0 | 3 | 0 | 2 | 0 | 2 | 0 | 5 | 0 | 7 | 1 | 3 | 11 | 4 | 0 | 0 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 0 | 2 | 6 | 5 | 1 | 0 | 2 | 0 | 0 | 0 | 1 | 0 | 0 | 1 | 0 | 2 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 60 | 7 | 45 | 61 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 39 | 22 | 29 | 83 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 42 | 5 | 39 | 87 | ||||||||||||
| Total protein-coding genes (size: 11404 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 208 (5.48%)
Alanine (Ala, A)
n = 240 (6.32%)
Serine (Ser, S)
n = 304 (8.0%)
Threonine (Thr, T)
n = 312 (8.21%)
Cysteine (Cys, C)
n = 29 (0.76%)
Valine (Val, V)
n = 161 (4.24%)
Leucine (Leu, L)
n = 591 (15.56%)
Isoleucine (Ile, I)
n = 365 (9.61%)
Methionine (Met, M)
n = 235 (6.19%)
Proline (Pro, P)
n = 196 (5.16%)
Phenylalanine (Phe, F)
n = 237 (6.24%)
Tyrosine (Tyr, Y)
n = 130 (3.42%)
Tryptophan (Trp, W)
n = 105 (2.76%)
Aspartic acid (Asp, D)
n = 71 (1.87%)
Glutamic acid (Glu, E)
n = 93 (2.45%)
Asparagine (Asn, N)
n = 168 (4.42%)
Glutamine (Gln, Q)
n = 86 (2.26%)
Histidine (His, H)
n = 97 (2.55%)
Lysine (Lys, K)
n = 99 (2.61%)
Arginine (Arg, R)
n = 64 (1.68%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 188 | 177 | 190 | 80 | 98 | 257 | 12 | 123 | 81 | 5 | 32 | 33 | 80 | 16 | 115 | 122 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 45 | 8 | 21 | 51 | 97 | 90 | 2 | 34 | 47 | 104 | 23 | 42 | 50 | 100 | 4 | 55 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 88 | 163 | 6 | 47 | 69 | 128 | 3 | 17 | 40 | 53 | 77 | 9 | 21 | 56 | 112 | 38 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 59 | 80 | 13 | 25 | 46 | 87 | 12 | 9 | 11 | 40 | 4 | 0 | 0 | 9 | 0 | 96 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 773 | 890 | 1236 | 901 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 463 | 995 | 753 | 1589 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 175 | 1147 | 1628 | 850 | ||||||||||||
>NC_012374.1 Rattus rattus mitochondrion, complete genome GTTGATGTAGCTTATAATAAAGCAAAGCACTGAAAATGCTTAGATGGATTGCTAAAAATCCCATAAACAC AAAGGTTTGGTCCTGGCCTTATAATTAATTGGAGGTAAGATTACACATGCAAACATCCATAAGCCGGTGT AAAATCCCTTAAACATTTATCCAAAACTTAAGGAGAAGGCATCAAGCACATACCATAGCTCAAGACGCCT TGCCTAGCCACACCCCCACGGGACTCAGCAGTGATAAATATTAAGCAATGAACGAAAGTTTGACTAAGCT ATACCTCTCAGGGTTGGTAAATTTCGTGCCAGCCACCGCGGTCATACGATTAACCCAAACTAATTATTTT CGGCGTAAAACGTGCCAACTATAAATCTCACAATAGAATTAAAACCCAACTTATATGTGAAAATTCATTG TTAGGACTAAAGACCGATAACGAAAGTAATTCTAATCATTTATATAATGCACGATAGCTAAGATCCAAAC TGGGATTAGATACCCCACTATGCTTAGCCCTAAACCTTAATAATTACATCTACAAAAATATTTGCCAGAG AACTACTAGCTACAGCTTAAAACTCAAAGGACTTGGCGGTACTTTATATCCATCTAGAGGAGCCTGTTCT ATAATCGATAAACCCCGTTCTACCTCACCACCTCTTGCTAATTCAGCCTATATACCGCCATCTTCAGCAA ACCCTAAAAAGGCACTAAAGTAAGCACAAGAACAAGCATAAAAACGTTAGGTCAAGGTGTAGCCAATGAA GTGGGAAGAAATGGGCTACATTTTCTTTTCAAAGAACATTACGAAACCCTTTATGAAACTAAAGGACAAA GGAGGATTTAGTAGTAAATTAAGAATAGAGAGCTTAATTGAATAGAGCAATGAAGTACGCACACACCGCC CGTCACCCTCCTCAAATTAGATTGATATATGTACATACATAATACCACTAACAAATTTATGAGAGGAGAT AAGTCGTAACAAGGTAAGCATACTGGAAAGTGTGCTTGGAATAATCACAGTGTAGCTTAACTACAAAGCA TCTGGCCTACACCCAGAAGAATTCATAAAAATGAACACTTTGAACTAATCCTAGCCCTAAAACCAACTAA TATAATTAAATTATTGTATAGACTAAAACATTTAACTCAAAAAGTATTGGAGAAAGAAATTTACTTATAG GAGCTATAGAGAAAGTACCGTAAGGGAATGATGAAAGACTAATTTAAAGTAACAATAAGCAAAGATTAAA CCTTGTACCTTTTGCATAATGAATTAACTAGAAAAACCTTAGCACAAAGAATTAAAGCTAAAAACCCCGA AACCAAACGAGCTACCTAAAAACAATTTTATGAATCAACCCGTCTATGTAGCAAAATAGTGGGAAGATTT TTAGGTAGAGGTGAAAAGCCTACCGAGCTTGGTGATAGCTGGTTGCCCAAAAAAAAGAATTTCAGTTCAA CTTTAAGTTTACCATAAGAACAATAAATCAAAATGTAAACTTAAAATATAGCTAAAAGAGGGACAGCTCT TTTGGAAAGGAAAAAACCTTAAATAGTGAATAAACAACTAACAACTAACTTAATCATTGTAGGCTTAAAA GCAGCCACCAATAAAGAAAGCGTTCAAGCTCAACATACTTATACGCACTAATCCCCTAAACCTCAATAAA TTCCTATCCTATCAATTGGGCTAATCTATAAAACCATAGATGAAATACTGTTAATATGAGTAACAAGAAT TAATTCTCCTTAGCACAAGTGTATGACACCCCGGATAACCATTGTCAATTACCGAATTACAGGTATTAAC CCCATAATAAAACCACCTGATCCTAACTCGTTAGTCCAACACAGGAGTGCTTCAAGGAAAGATTAAAAAA AGTAAAAGGAACTCGGCAAACACGAGCCCCGCCTGTTTACCAAAAACATCACCTCTAGCATAACAAGTAT TAGAGGCATTGCCTGCCCAGTGACTAAAGTTAAACGGCCGCGGTATCCTGACCGTGCAAAGGTAGCATAA TCACTTGTTCCTTAATTAGGGACTAGAATGAATGGCTAAACGAGGGTTCAACTGTCTCTTACTTTCAATC AGTGAAATTGACCTTCCAGTGAAGAGGCTGGAATACTACAATAAGACGAGAAGACCCTATGGAGCTTTAA TTTACTAGTTTAATTTATACAGTAACAACCTAATGGACCAAAACAAAATAAATATAAACTAAAAATTTCG GTTGGGGTGACCTCGGAGAATAAAAAATCCTCCGAATGATTTTAACCTAGACCCACAAGTCAAAGTAATA TTAATATCTTATTGACCCAATTATTGATCAACGGACCAAGTTACCCTAGGGATAACAGCGCAATCCTATT TAAGAGTTCATATCGACAATTAGGGTTTACGACCTCGATGTTGGATCAGGACATCCCAATGGTGCAGAAG CTATTAATGGTTCGTTTGTTCAACGATTAAAGTCCTACGTGATCTGAGTTCAGACCGGAGTAATCCAGGT CGGTTTCTATCTATTTACAATTTCTCCCAGTACGAAAGGACAAGAGAAATGGAGCCACCTTACCATAAGT GCTCCCAAACCAATTTATGAAAAAAATCTCAATAAAATATGTATGTACAACAAATTAAACCTAGACCAGG TTATTAGGGTGGCAGAGCCAGGTAATTGCGTAAGACTTAAAACCTTGTTCCCAGGGGTTCAAATCCTCTC CCTAATAGTGTACTTTATTAATATCCTAACTCTCCTAATCCCAATCTTAATCGCCATAGCCTTTCTCACC CTAGTAGAACGGAAAATCCTAGGCTATATACAACTACGCAAAGGTCCTAACATTGTAGGCCCATATGGTA TTTTACAACCATTCGCAGACGCCATAAAACTATTTATGAAAGAACCCATACGCCCCCTAACCACCTCCAT ATCATTATTCATTATTGCACCAACCCTCTCCCTCACCCTAGCCCTGAGTCTATGGGTCCCCCTACCAATA CCGCACCCTCTCATTAACCTCAACCTAAGCATACTATTTATTCTAGCCACATCAAGCCTTTCAGTCTATT CCATTTTATGATCAGGATGAGCATCAAATTCGAAGTACTCCCTATTTGGAGCCCTACGAGCTGTTGCCCA AACCATCTCCTACGAAGTAACAATAGCCATCATCCTCTTATCTGTCCTATTAATAAGCGGCTCATTTTCC CTGCAAATACTTATTACTACACAAGAACATATCTGATTGCTAATCCCTGCCTGACCAATAGCCATAATAT GATACATCTCAACCCTAGCAGAGACAAACCGAGCCCCATTCGACCTGACAGAAGGAGAATCAGAACTAGT CTCAGGCTTCAACGTTGAATACGCCGCAGGACCCTTCGCCCTATTCTTCATAGCCGAATACACCAACATT ATTCTAATGAACGCCCTAACATCAATTGTATTTCTAGGACCCTTATACTACATCAACCATCCTGAACTAT ACTCAATCAACTTCATAACAGAAACGCTACTCCTATCAACAGCCTTTCTATGAGTGCGAGCATCCTACCC TCGCTTCCGATACGATCAACTAATACACCTCCTATGAAAAAATTTCCTCCCACTAACACTAGCATTATGT ATATGATACATTTCCCTACCAATCTCCCTGGCGGGAATCCCGCCCCACACATAGAAATATGTCTGACAAA AGAGTTACTTTGATAGAGTGAATTATAGAGGTTTAAATCCTCTTATTTCTAGGACAATAGGAATTGAACC TACACCTAAGAATTCAAAATTCTTCGTGCTACCAATACACCCTATCCTATATAGTAAGGTCAGCTAACTA AGCTATCGGGCCCATACCCCGAAAATGTTGGTCTAAACCCTTCCCGTACTAATAAACCCAATTACCCTAA TCATCATTTACTTTACCATTTTTATAGGACCCGCAATCACCATATCTAGCTCCAACCTACTCCTAATGTG AGTAGGATTAGAAATAAGTCTCTTAGCTATTACCCCCCTTCTAACTAACAAAAAAAGTCCACGATCAACT GAAGCAGCAACAAAATATTTTCTAACACAAGCTACAGCCTCAATAATCATTTTACTAGCTATCGTCCTAA ACTATAAACAATCAGGGATATGAACATTCCAACAACAAACCAACAATATATTACTCAACATAATACTTAT CTCACTATCCATAAAACTTGGGTTAGCCCCATTCCACTACTGACTACCTGAAGTCACCCAAGGAATCCCT ATGCACATCGGATTAATCCTACTAACATGACAAAAAATCGCCCCCTTATCAATACTATACCAAATTTATC AATTCCTAAACCCAACCATTACAACTATTCTCGCAATCTCATCAGTCCTAATTGGCGCCTGAGGAGGATT AAACCAAACACAAACACGGAAGATCATAGCATACTCATCAATTGCTCATATAGGATGAATAGTGGCAATT CTCCCCCACAATCCTAATCTGACACTCCTAAACCTAACAATTTATATCCTACTCACTATCCCAATATTCA CCACACTCATGATAAGCTCCGCAACATCAATTAACTCACTCTCACTAGCATGAGACAAAACCCCTATAAT TTTAGCCATAACATCCATTATTCTCTTATCCCTAGGAGGACTCCCCCCTCTCACAGGGTTCCTACCAAAA TGAGCAATCATCTCAGAACTCCTAAAAAACAACTGCTCAATCCTATCAACGCTAATAGCCATCATAGCCT TATTAAACCTATTCTTCTATGCACGACTAATCTACTCTATATCTCTCACTATGTTTCCAACCAACAATAA CTCAAAAATAATCTCCCACCACCCAAACCTAAAATACAATTTTATCCTTCCAACACTAACAGTACTAAGT ACCCTAACCCTACCACTTTCATCCCAACTCATAACATAGAAGTTTAGGATATACAGTCCAAGAGCCTTCA AAGCCCTTAGAAAACAAGCAAGTTTAACTTCTGATAAGGACTGTAAGACTATACCCTACATCCGTTGAAT GCAAATCAACTGCTTTAATTAAGCTAAGACCTTAACTAGATTGGAAGGATTTAAACCTACGAAAATTTAG TTAACAGCTAAATACCCTACTTACTGGCTTCAATCTACTTCTCCCGCCTAACAGAAAAGAGGCGGGAGAA GCCTTAGTAGAGGGGGTTCTCTACACCTTCGAATTTGCAATTCGACATGATAAACACTTTAAGACTTTTG GTAAAAAGAGGATTCAACCCCTGTCTTTAGATTTACAGTCTAATGTCTACTCGACCATTTTACCTATGTT CGTAAACCGTTGACTCTTTTCAACTAACCACAAAGATATCGGAACCCTCTATCTATTATTTGGTGCCTGA GCAGGAATAGTAGGGACAGCCTTAAGTATTCTCATTCGAGCTGAACTAGGACAACCAGGAGCACTCCTAG GCGATGACCAAATTTATAATGTCATTGTTACAGCCCATGCATTCGTAATAATTTTCTTTATAGTTATGCC TATGATAATCGGAGGCTTCGGAAACTGGCTTGTGCCGCTAATGATTGGGGCCCCTGATATAGCATTCCCA CGAATAAACAACATAAGCTTTTGATTACTTCCCCCATCATTTTTACTCCTTTTAGCATCATCTATGGTAG AAGCCGGAGCCGGAACAGGATGAACAGTATACCCACCCTTAGCCGGTAATCTAGCCCATGCCGGAGCTTC TGTTGATCTAACCATTTTCTCCCTTCACCTAGCCGGCGTATCCTCTATCTTAGGAGCTATTAATTTTATC ACCACTATTATCAATATAAAACCCCCTGCTATAACCCAATATCAGACACCTCTATTTGTGTGATCCGTAT TAATTACAGCTGTACTTCTACTTCTTTCACTACCAGTGTTGGCAGCAGGCATTACCATACTCCTCACAGA TCGAAACCTAAATACTACTTTTTTTGATCCTGCTGGAGGCGGAGATCCAATTCTCTATCAACATCTATTT TGATTCTTCGGACACCCAGAAGTCTATATCCTCATCCTCCCAGGATTTGGAATTATCTCCCACGTAGTTA CCTACTACTCTGGGAAAAAAGAACCATTTGGATATATAGGCATAGTTTGGGCCATAATATCTATTGGTTT CCTAGGATTTATTGTATGAGCTCATCATATATTCACAGTAGGCCTAGATGTAGACACGCGAGCCTATTTC ACATCTGCCACCATAATTATCGCAATCCCTACAGGAGTAAAAGTATTTAGCTGACTTGCTACCTTGCACG GAGGTAACATCAAATGATCTCCTGCTATACTATGAGCCCTAGGGTTTATTTTCTTATTCACAGTAGGAGG GTTAACAGGAATCGTCCTATCTAATTCATCACTTGATATCGTACTCCATGATACATACTATGTAGTAGCC CACTTCCACTATGTGTTATCTATAGGAGCAGTATTTGCCATTATAGCCGGCTTTGTCCACTGATTTCCTC TATTTTCAGGATACACCCTAGACGATACATGAGCAAAAGCCCACTTCGCTATCATATTTGTAGGTGTCAA CATAACATTCTTCCCTCAACATTTCCTAGGACTGTCAGGAATACCTCGACGATACTCTGACTACCCAGAT GCTTACACCACATGAAACACAATCTCATCTATAGGTTCATTTATCTCACTTACAGCCGTCCTCGTAATAA TTTTTATGATTTGAGAGGCCTTCGCATCAAAACGAGAAGTGCTTTCAGTCTCCTACTCCTCAACCAACCT AGAATGACTTCACGGGTGTCCTCCACCTTACCACACATTCGAAGAGCCTTCCTATGTAAAGGTTAAATAA GAAAGGAAGGATTCGAACCCCCTACAACTGGTTTCAAGCCAATTTCATAACCACTATGTCTTTCTCGATG AGATATTAGTAAAATAATTACATAACCTTGTCAAGGTTAAGTTATAGACTTAAATCTATATATCTTACAT GGCTTACCCATTCCAACTTGGCTTACAAGACGCTACATCACCCATCATAGAAGAACTTATAAACTTTCAT GATCACACCCTAATAATTGTGTTCCTCATCAGCTCATTAGTACTTTATATTATCTCACTAATACTAACAA CAAAACTAACACATACAAGCACAATAGACGCCCAAGAAGTGGAAACAATTTGGACAATCCTTCCAGCTGT TATTCTTATTCTAATCGCCCTCCCTTCCCTACGAATTTTATACATAATAGACGAAATCAATAACCCAGTT CTAACAGTAAAAACTATAGGTCACCAATGATACTGAAGCTACGAATACACCGACTATGAAGACCTATGTT TTGACTCCTACATAATCCCAACCAACGACTTAAAACCAGGTGAGCTTCGTCTATTAGAAGTGGATAACCG AGTAGTTTTACCAATAGAACTTCCAATTCGTATACTAATCTCATCCGAAGACGTCTTACACTCATGAGCC GTCCCTTCACTAGGACTAAAAACCGACGCAATCCCAGGCCGTCTAAATCAAGCTACAGTGACATCAAATC GACCAGGCCTATTCTACGGGCAATGCTCTGAAATCTGCGGCTCAAATCACAGTTTCATGCCTATTGTACT AGAAATAGTACCCCTAAAACACTTCGAAAACTGATCCGCTTCTATAATCTAAATTCATTGCGAAGCTTAG AGCGTTAACCTTTTAAGTTAAAGTTAGAGACCACAAATCTCCACAATGGTATGCCACAACTAGACACATC CACATGATTTATTACAATCATTTCCTCAATAATTACATTATTTATCCTATTTCAATTAAAAATCTCTTCC CAAACCTTCCCTACAGCCCCCTCACCCAAAATTATAGCCACAGAAAAAACAAGCAACCCTTGAGAATCAA AATGAACGAAAATCTATTTGCCTCTTTCATTACCCCAACAGTAATAGGTCTACCAATTGTCGTAACCATC ATCATATTTCCATCAATTTTGTTCCCATCATCAGAACGCCTTATTAGCAACCGCCTCCACACATTTCAAC ACTGACTAATTAAGCTTATTCTCAAACAAATAATGTTAATTCATACACCAAAAGGACGAACCTGAGCACT AATAATCGTATCACTAATTATATTTATTGGCTCAACTAACCTTTTAGGCTTGCTTCCCCACACATTTACT CCCACTACTCAACTATCTATAAATCTAAGCATAGCTATTCCTCTATGAGCAGGAGCCGTAATCTTAGGTT TCCGGCATAAGTTAAAAAGTTCTTTAGCCCACTTCTTACCTCAAGGAACGCCCATTTCACTCATTCCCAT ACTAATTATTATCGAAACTATCAGCCTTTTCATCCAACCAATAGCACTAGCAGTACGACTAACAGCAAAT ATCACAGCAGGCCACCTATTAATGCACCTAATCGGAGGAGCCGCCCTAGTTCTCATAAACATTAGCCCAC CAACCGCTACAATCACATTTATTATCCTTCTCCTACTTACAATACTTGAATTCGCTGTAGCTTTAATTCA AGCTTACGTATTCACTCTTCTAGTAAGCCTATATCTACATGATAATACATAATGACCCACCAAACCCACG CATATCACATAGTAAATCCAAGCCCATGACCACTAACAGGAGCAATGTCAGCTCTTCTACTTACATCTGG TTTAGTAATATGATTCCACTACAACTCCACAACTCTCCTATCATTAGGTCTCCTAGCAAATATCCTAACA ATATATCAATGATGACGAGACATTATCCGCGAAGGAACATACCAAGGCCACCACACCCCCATTGTACAAA AAGGACTTCGATACGGAATAATCCTATTCATTATCTCCGAAGTATTCTTTTTTGCTGGATTTTTCTGAGC ATTCTACCACTCCAGCCTAGTCCCCACCCACGACCTAGGCGGTTGCTGACCCCCAACAGGAATTACCCCC TTGAACCCTCTAGAAGTACCTCTCCTAAACACATCAGTTCTTCTAGCATCAGGAGTCTCAATTACATGAG CACATCACAGCCTAATAGAAGGCAACCGAAACCATATAAATCAAGCCTTACTAATCACCATCCTCCTAGG ACTTTACTTCACTATCCTACAAGCCTCAGAATACTTTGAAACATCATTTTCTATCTCAGACGGAATTTAT GGCTCAACATTCTTCATAGCAACAGGATTTCATGGCCTACATGTAATTATTGGCTCAACTTTCCTTATCG TTTGTCTATTACGACAACTAAAATTTCACTTTACATCAAAACACCATTTTGGGTTTGAAGCCGCAGCATG ATATTGACATTTCGTAGATGTAGTTTGACTATTCCTATATGTTTCTATCTATTGATGAGGATCATACTCC CTTAGTATAATCAATACAACTGACTTCCAATCAGTAAATTCTGAAAAACCCAGAAGAGAGTAATTAACCT GTTTATTATTATTACAATCAATACCACCCTCTCTCTCATTCTTGCTTCAATCGCATTCTGACTCCCCCAA ATAAATCTTTATTCCGAAAAAGCAAACCCATATGAATGCGGGTTTGACCCAACAAGCTCTGCACGCCTCC CCTTTTCAATAAAATTCTTCCTAGTAGCTATCACATTCTTACTATTCGACCTAGAAATTGCCCTTCTACT CCCCCTTCCATGAGCAATTCAAACAGCTAACATTGCCACAATAACAGCAACTGCCTTTATCTTAGTTACT ATCCTAGCTCTCGGCCTTAGCTACGAATGAACACAAAAAGGACTAGAATGAACAGAGTAATTGGTAATTA GTTTAAACAAAATTAATGATTTCGACTCATTAGATTATGATAACAATCATAATTACCAACAATGACATCT GCTTTCTTAAATCTGACCCTAGCCTTCATGATATCTTTACTAGGTACTTTTATATTCCGCTCCCACTTAA TATCTACTCTCCTTTGCCTAGAAGGAATAATATTATCCCTGTTTATTATAACTTCAACATCCACATTAAA CTCTAACTCCATAATCTCCATAACCATCCCCATCACCATTCTAGTCTTTGCAGCTTGCGAAGCAGCAGTA GGCCTAGCCCTACTAGTAAAAATCTCAAATACCTATGGAACAGATTATGTACAAAACCTCAACCTCTTAC AATGCTAAAAATTATTTTCCCATCACTCATGCTTCTACCACTAACATGACTCTCAAACAACAAGAAAACC TGAACTAACGTCACCTCCTACAGCTTCCTAGTAAGCCTAGCAAGCTTATCGTTACTTTGACAAAACGACG AAAACTACCTAAATTTCTCAATTATATTTTCCTCCGACCCACTATCTACCCCCCTAATCATCCTAACAAC TTGACTACTCCCACTAATAATACTCGCCAGCCAAAATCACATAAAAAAAGAAAATCCCATGCACCAAAAA CTTTACATCTCAATACTTATCAGCCTTCAAATCTTACTTATCATAACATTCTCTGCAACAGAACTAATCT TATTCTATATCCTATTTGAAGCCACTCTAATCCCAACATTAATTATTATCACCCGATGAGGAAATCAAGC AGAACGACTAAATGCAGGAATTTACTTCCTATTTTATACATTAATCGGCTCCATTCCACTTCTAATCGCT CTTATTTCGATCCAAAACTCAATAGGAACTCTCAATTTTCTAGTTCTCTCCCTCACAACACAACCCTTGC CCCCAACATGATCCAACAACATTTTATGACTAGCATGCATGATAGCATTCATAATCAAAATACCACTATA TGGAGTTCATCTGTGATTACCAAAAGCCCACGTAGAGGCCCCAATTGCAGGCTCCATGATCTTAGCAGCA ATTCTCCTAAAACTAGGAGGTTATGGTATGATACGAGTCTCCATAATTCTAGACCCCCTAACAAAATCCT TAGCCTACCCATTCATCATACTCTCATTATGAGGCATAATCATAACTAGTTCAATCTGCTTACGTCAGAC AGACCTAAAATCATTAATTGCTTACTCATCAGTAAGCCATATAGCCCTAGTCATCACAGCCATCATAATT CAAACACCATGAAGTTTCATAGGAGCTACAATACTAATAATCGCACATGGTTTAACATCATCACTCCTAT TCTGCCTCGCAAACACTAACTACGAACGAATTCACAGCCGAACCATAATTATAGCTCGAGGACTACAAAT AATTTTCCCACTAATAGCAACATGATGACTATTAGCAAGCCTAGCCAACTTAGCTTTACCGCCCCTAATC AACCTTATAGGAGAATTATTTATTGTCATAGCAACATTTTCCTGATCAAGCCCCTCTATCACCCTTATAG CAACAAATATCGTCATTACAGGAATGTACTCAATATATATAATTATTACAACCCAACGAGGCAAATTAAC TAGCCACATGAACAACCTTCAACCCTCCCACACACGAGAATTGACACTTATAGCCCTTCATATTATCCCC CTCATACTATTAACAATTAACCCTAAACTCATCACAGGCCTAACAATATGTAGATATAGTTTACAAAAAA CATTAGACTGTGAATCTAACAACAGGAAATCAAACTCCTTATTTACCAAGAAAGTATGCAAGAACTGCTA ATTCATGCACCCATACCTAAACATATGGCTTTCTTACTTTTATAGGATAATAGTAATCCATTGGTCTTAG GAACCAAAAACCTTGGTGCAACTCCAAATAAAAGTAATAAATATAATAACATCCTCAATCCTCATAATTT TAATCTTACTCACAACACCAATCATTATTTCTATGACTAACCTACCCAAATTTATTGACTTTCCACTCTA TGCTACCTCATCCATTAAATTCTCATTTTTCCTCAGCCTCTTACCCTTACTACTATTTTTTTACTACAAT ACAGAATATATAATCACTAACTGACATTGACTAACCATCAACTCTATTAAACTTACTATAAGCTTCAAGA TTGATTATTTCTCAATCTTATTTTTATCCGTGGCCCTATTCGTAACATGATCAATTATGCAGTTCTCTTC ATGATACATACATTCTGACCCCTACATCAACCGATTTATTAAATACTTAATAATATTCCTAATTACTATA CTAATTCTAACCTCAGCTAACAACCTATTTCAACTCTTCATTGGATGAGAAGGCGTAGGAATCATATCCT TCCTACTAATCGGGTGATGATACGGCCGTGCAGACGCCAACACAGCAGCCCTTCAAGCAATCTTGTACAA CCGAGTCGGAGATGTCGGTTTTATCCTAGCCATAACTTGATTCTGCCTAAATACAAACTCTTGGGAACTT CAACAAATTTTCTTAACTAACACCAACAACCTAGTACCTCTCACAGGACTCCTAATTGCAGCCACAGGAA AATCTGCTCAATTTGGACTCCATCCATGACTCCCATCCGCCATAGAAGGCCCAACTCCTGTATCCGCCCT ATTACACTCAAGCACTATAGTTGTCGCAGGAATCTTCCTAATAATCCGATTTCACCCACTAACTTCAAAC AATAGCACCATTATAACAGCCATACTATGCCTCGGAGCCATTACCACACTATTTACAGCAATTTGCGCAC TTACACAAAACGACATCAAAAAAATTGTAGCCTTTTCCACATCTAGCCAATTAGGACTTATAATAGTCAC CCTAGGAATTAACCAGCCTTACCTAGCTTTTCTTCATATCTGCACCCATGCATTCTTCAAAGCAATACTA TTCATATGCTCAGGATCAATCATTCACAGCCTTAACGACGAACAAGACATTCGAAAAATAGGTAACATAA TAAAAGTAATACCATTTACATCATCCTGCCTTATTATCGGAAGCCTAGCCCTTACTGGAATACCATTTCT CACAGGATTTTACTCAAAAGACCTCATCATCGAAACCATCAACACGTGCAACACCAACGCCTGAGCCCTA ATAATCACCTTAATCGCCACATCCATAACTGCCGTTTACAGCATACGAATCATCTACTTCGTTACCATGA CAAAACCACGTTATTCCCCACTAATTACCATTAACGAAAATAACCCAAATCTCATTAATCCAATCAAACG TCTAGCATTAGGAAGTATTATAGCAGGCTTTCTTATCTCACTCAATATTCCTCCAACTAATATTCAAATT CTCACCATACCCTGATACCTAAAACTAACAGCTCTACTCATCACAATCTTAGGCTTCGCTATCGCCCTAG AACTCAACAATCTAACCCTAAACCTATCAATAAACAAAACCACCAAACTATCATCATTCTCAACTTCACT AGGCTATTTCCCATCAATTATGCACCGAATAATCCCCCAAAAAACACTAAATTCTAGCTATAAAGTATCC CTAAACCTCCTAGACCTGACCTGACTAGAAAAGACAATCCCAAAGTCAACCTCTATCACCCAAACCCATC TATCCAAAATGATAACCAATCAAAAAGGACTAGTTAAACTATATTTCCTGTCTTTCCTCATTACAATCTC ACTAATTTTTATTTTACATATACTTAATCCCGAGTGATTTCAATAATAATAAAAATCCCTGCAAACAATG ATCACCCAGCCACTACCATTATCCAAGTAACACAACTATACATAGCTGCAACCCCAATTCCACCCTCCAA TATGACTCCAACATCATCAATCTCATATATTAATCAGTCACCCAAACTATCAAAATCAACTAACTCTACC TTATTATTTAAACTAAGTAGATAAAATATCACTAACTCCATAAAAAGGCCTAAAACAAAAAAACCAAAAA TAAACCAATTAGAACCCCAAGTCTCTGGGTATTCCTCAGTAGCCATAGCAGTTGTATAACCAAATACAAC CAACATCCCACCCAAATAAATCAAAAACACCATTAAACCTAAAAAAGAACCCCCAAAACCCAATACTATT AAACACCCAATACATCCACTAACAATCAAACCAAATCCACCATAAATAGGTGAAGGCTTCAACGCCAACC CTAAACAACCTGTCAAAAATAATAAACTTAAAATAAACATATAATTTGTCATTATTTCTACACAGCATTT AACTGTGACCAATGACATGAAAAATCATCGTTGTAATTCAACTATAGAAACCCCTAATGACAAACATTCG AAAATCACACCCCCTAATCAAAATTATTAATCACTCCTTCATTGACCTTCCCGCCCCATCCAACATCTCA TCATGATGAAATTTTGGCTCTCTTCTAGGAGTATGCCTTATAGTTCAAATTATCACAGGATTATTTCTAG CAATACACTACACATCCGACACTTTAACAGCATTCTCATCAGTTACTCACATCTGCCGAGACGTAAACTA CGGCTGACTAATCCGATACTTACATGCCAACGGAGCCTCAATATTCTTTATCTGCTTATTCCTCCATGTA GGCCGAGGGATATACTACGGATCCTACACCTTCTTAGAAACATGAAACATTGGAATTATCCTACTATTTG CAGTCATAGCAACCGCATTCATAGGTTATGTACTCCCATGAGGACAAATATCATTCTGAGGGGCCACAGT AATCACAAACCTATTATCAGCCATTCCCTACATTGGCACCACTCTAGTCGAATGAATCTGAGGAGGCTTC TCAGTAGACAAAGCAACCCTAACACGTTTTTTCGCATTCCACTTCATCCTCCCATTCATCATCGCCGCCC TTGCAATTGTACATCTCCTCTTCCTCCACGAAACAGGATCAAACAACCCCACAGGACTAAACTCTGACGC AGACAAAATCCCATTTCATCCATACTACACAATTAAAGACTTACTTGGAGTATTCATGTTACTCCTATTT CTAATAACTCTAGTATTATTCTTCCCAGACTTACTAGGAGACCCAGACAACTACACACCTGCTAACCCAC TAAATACCCCACCACATATTAAGCCAGAATGGTATTTCCTATTTGCCTACGCTATTCTACGCTCCATCCC TAACAAATTAGGAGGAGTAGTAGCCTTAGTCCTATCAATTCTAATCTTAGCCTTTCTACCATTCTTACAT ACCTCAAAACAACGCAGTCTAACATTCCGCCCAATCACCCAAATTCTATACTGAATTCTAGTAGCCAACC TCTTCATTTTAACATGAATTGGGGGCCAACCAGTAGAACACCCATTTATTATTATTGGCCAACTAGCATC CATCAGTTACTTCTCAATTATCCTTATTTTAATACCAATCTCCGGAATCATTGAAGACAAAATACTAAAA TGAAACTAATGTCCCGATAGTATAAAAATTACTTTGGTCTTGTAAACCAAAAATGAAGAGCTATTCTTCT CAGGACATGTCAAGAAGAAGGAACTAACTCCCCACCATCAACACCCAAAGCTGATATTCTAATTAAACTA CTTCTTGACAGTACATAAAATTATCTAGTACATTAAAACATTTATGTATATCGTACATTAATTTATTTTC CCCAAGCATATAAGCATGTAATATATAATTAATGTATTAAGACATAAATTTAAACTCAACTAAAAATTTA AACCAACATGAATATTCTTTCATACATTAAGATAATGTTTTAAAGACATATCTGTGTTATTAGACATACA CCATTAAAGTCATAAATTCTTTCTCTTCCATATGACTATCCTCAACCTAAGTTGGTCTCTATTTCTACCA TCCTCCGTGAAATCAACAACCCGCCCACTAGTCCCTCTCTTCTCGCTCCGGGCCCATACAACTTGGGGGT GACTATCATAGAACTTTATCAGACATCTGGTTCTTACTTCAGGGCCATCAATTGGTTCATCGTCCATACG TTCCCCTTAAATAAGACATCTCGATGGTACAGGTCTAATCAGCCCATGATCAACATAACTGTAGTCTCAT ACATTTGGTATTTTTTAATTTTCGGATGCCTTCAGTCAACATAGCCGTCAAGGCATGAAAGTCAGCCCAA AGTCCCGGCGAACCTTTTAGTTAAGTGTCATTTATCCTCATAGACAAAGCTCGAAAGACATAATATCCAT GTTTATAAGACATAAAAATTTACTAATACCAAAAAATCTCTCAACAAACCCCCCCACCCCCTAATGCCTA ATTTCAATGCCAAACCCCAAAAACATTGAAAAAAGAAATTAAATAAAACAAAATACTTAATTCCTTAAAG GCCTTTTTCCCATTCTAGTAGTCCCCAAAATTTTAACTAAAATCCTAGCATTAGTAAAATTTGCCATCAC AAAAATTCACCTGACCAAAGCCCCCCTTTCCGCCTACCCCCAGAAAAACCCAGCAAAACATTACA
Contact: Vadim E. Fraifeld, MD, PhD
Head: Lab for the Biology of Aging, The Shraga Segal Department of Microbiology, Immunology and Genetics, Faculty of Health Sciences, Ben-Gurion University of the Negev
P.O. Box 653, Beer-Sheva 8410501, Israel
Email:
Head: Lab for the Biology of Aging, The Shraga Segal Department of Microbiology, Immunology and Genetics, Faculty of Health Sciences, Ben-Gurion University of the Negev
P.O. Box 653, Beer-Sheva 8410501, Israel
Email:
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If you would like to cite this database please use:
Toren D, Barzilay T, Tacutu R, Lehmann G, Muradian KK, Fraifeld VE. MitoAge: a database for comparative analysis of mitochondrial DNA, with a special focus on animal longevity. Nucleic Acids Res. 2016; 44(D1):D1262-5.
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