Viewing data for Gorilla gorilla


Scientific name Gorilla gorilla
Common name Gorilla
Maximum lifespan 55.40 years (Gorilla gorilla@AnAge)

Total mtDNA (size: 16412 bases) GC AT G C A T
Base content (bases) 7188 9224 5039 2149 4145 5079
Base content per 1 kb (bases) 438 562 307 131 253 309
Base content (%) 43.8% 56.2%
Total protein-coding genes (size: 11336 bases) GC AT G C A T
Base content (bases) 4998 6338 3687 1311 2953 3385
Base content per 1 kb (bases) 441 559 325 116 260 299
Base content (%) 44.1% 55.9%
D-loop (size: 964 bases) GC AT G C A T
Base content (bases) 460 504 315 145 220 284
Base content per 1 kb (bases) 477 523 327 150 228 295
Base content (%) 47.7% 52.3%
Total tRNA-coding genes (size: 1504 bases) GC AT G C A T
Base content (bases) 595 909 363 232 399 510
Base content per 1 kb (bases) 396 604 241 154 265 339
Base content (%) 39.6% 60.4%
Total rRNA-coding genes (size: 2508 bases) GC AT G C A T
Base content (bases) 1091 1417 642 449 550 867
Base content per 1 kb (bases) 435 565 256 179 219 346
Base content (%) 43.5% 56.5%
12S rRNA gene (size: 950 bases) GC AT G C A T
Base content (bases) 426 524 246 180 204 320
Base content per 1 kb (bases) 448 552 259 189 215 337
Base content (%) 44.8% 55.2%
16S rRNA gene (size: 1558 bases) GC AT G C A T
Base content (bases) 665 893 396 269 346 547
Base content per 1 kb (bases) 427 573 254 173 222 351
Base content (%) 42.7% 57.3%

ATP6 (size: 681 bases) GC AT G C A T
Base content (bases) 304 377 229 75 172 205
Base content per 1 kb (bases) 446 554 336 110 253 301
Base content (%) 44.6% 55.4%
ATP8 (size: 207 bases) GC AT G C A T
Base content (bases) 79 128 64 15 51 77
Base content per 1 kb (bases) 382 618 309 72 246 372
Base content (%) 38.2% 61.8%
COX1 (size: 1537 bases) GC AT G C A T
Base content (bases) 682 855 437 245 437 418
Base content per 1 kb (bases) 444 556 284 159 284 272
Base content (%) 44.4% 55.6%
COX2 (size: 684 bases) GC AT G C A T
Base content (bases) 310 374 211 99 173 201
Base content per 1 kb (bases) 453 547 308 145 253 294
Base content (%) 45.3% 54.7%
COX3 (size: 784 bases) GC AT G C A T
Base content (bases) 359 425 248 111 210 215
Base content per 1 kb (bases) 458 542 316 142 268 274
Base content (%) 45.8% 54.2%
CYTB (size: 1141 bases) GC AT G C A T
Base content (bases) 523 618 393 130 286 332
Base content per 1 kb (bases) 458 542 344 114 251 291
Base content (%) 45.8% 54.2%
ND1 (size: 956 bases) GC AT G C A T
Base content (bases) 434 522 325 109 246 276
Base content per 1 kb (bases) 454 546 340 114 257 289
Base content (%) 45.4% 54.6%
ND2 (size: 1042 bases) GC AT G C A T
Base content (bases) 446 596 351 95 271 325
Base content per 1 kb (bases) 428 572 337 91 260 312
Base content (%) 42.8% 57.2%
ND3 (size: 346 bases) GC AT G C A T
Base content (bases) 144 202 106 38 98 104
Base content per 1 kb (bases) 416 584 306 110 283 301
Base content (%) 41.6% 58.4%
ND4 (size: 1378 bases) GC AT G C A T
Base content (bases) 598 780 459 139 366 414
Base content per 1 kb (bases) 434 566 333 101 266 300
Base content (%) 43.4% 56.6%
ND4L (size: 297 bases) GC AT G C A T
Base content (bases) 118 179 86 32 90 89
Base content per 1 kb (bases) 397 603 290 108 303 300
Base content (%) 39.7% 60.3%
ND5 (size: 1812 bases) GC AT G C A T
Base content (bases) 792 1020 598 194 475 545
Base content per 1 kb (bases) 437 563 330 107 262 301
Base content (%) 43.7% 56.3%
ND6 (size: 525 bases) GC AT G C A T
Base content (bases) 229 296 194 35 94 202
Base content per 1 kb (bases) 436 564 370 67 179 385
Base content (%) 43.6% 56.4%

ATP6 (size: 681 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 8 (3.54%)
Alanine (Ala, A)
n = 22 (9.73%)
Serine (Ser, S)
n = 13 (5.75%)
Threonine (Thr, T)
n = 27 (11.95%)
Cysteine (Cys, C)
n = 0 (0%)
Valine (Val, V)
n = 8 (3.54%)
Leucine (Leu, L)
n = 45 (19.91%)
Isoleucine (Ile, I)
n = 24 (10.62%)
Methionine (Met, M)
n = 13 (5.75%)
Proline (Pro, P)
n = 14 (6.19%)
Phenylalanine (Phe, F)
n = 8 (3.54%)
Tyrosine (Tyr, Y)
n = 3 (1.33%)
Tryptophan (Trp, W)
n = 3 (1.33%)
Aspartic acid (Asp, D)
n = 0 (0%)
Glutamic acid (Glu, E)
n = 4 (1.77%)
Asparagine (Asn, N)
n = 11 (4.87%)
Glutamine (Gln, Q)
n = 8 (3.54%)
Histidine (His, H)
n = 6 (2.65%)
Lysine (Lys, K)
n = 5 (2.21%)
Arginine (Arg, R)
n = 4 (1.77%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
9 15 10 6 7 18 5 8 6 2 1 3 3 1 3 5
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
3 0 0 4 13 5 0 1 4 3 0 3 8 3 0 7
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
10 10 0 1 3 6 0 0 3 1 2 0 1 3 8 1
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
5 3 1 0 0 3 2 0 2 2 0 0 0 1 0 3
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
42 68 83 34
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
18 73 38 98
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
15 88 84 40
ATP8 (size: 207 bases)
Amino acid sequence: MPQLNTTVWPTMIAPMLLTLFLITQLKVLNTNYHLPPLPKTMKMKNFCKPWESKWTKIYSLHSLPPQS*
Amino acid frequencies:
Glycine (Gly, G)
n = 0 (0%)
Alanine (Ala, A)
n = 1 (1.47%)
Serine (Ser, S)
n = 4 (5.88%)
Threonine (Thr, T)
n = 8 (11.76%)
Cysteine (Cys, C)
n = 1 (1.47%)
Valine (Val, V)
n = 2 (2.94%)
Leucine (Leu, L)
n = 11 (16.18%)
Isoleucine (Ile, I)
n = 3 (4.41%)
Methionine (Met, M)
n = 5 (7.35%)
Proline (Pro, P)
n = 9 (13.24%)
Phenylalanine (Phe, F)
n = 2 (2.94%)
Tyrosine (Tyr, Y)
n = 2 (2.94%)
Tryptophan (Trp, W)
n = 3 (4.41%)
Aspartic acid (Asp, D)
n = 0 (0%)
Glutamic acid (Glu, E)
n = 1 (1.47%)
Asparagine (Asn, N)
n = 4 (5.88%)
Glutamine (Gln, Q)
n = 3 (4.41%)
Histidine (His, H)
n = 2 (2.94%)
Lysine (Lys, K)
n = 7 (10.29%)
Arginine (Arg, R)
n = 0 (0%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
3 0 4 1 3 4 0 2 2 1 1 0 1 0 1 1
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
1 1 0 0 1 0 0 0 0 0 0 0 6 3 0 1
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
4 2 1 0 1 2 1 0 0 1 1 1 1 2 2 1
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
1 1 0 0 0 7 0 0 0 0 0 0 0 0 1 2
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
4 22 27 16
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
4 22 20 23
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
7 20 30 12
COX1 (size: 1537 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 46 (9.0%)
Alanine (Ala, A)
n = 40 (7.83%)
Serine (Ser, S)
n = 31 (6.07%)
Threonine (Thr, T)
n = 36 (7.05%)
Cysteine (Cys, C)
n = 1 (0.2%)
Valine (Val, V)
n = 33 (6.46%)
Leucine (Leu, L)
n = 61 (11.94%)
Isoleucine (Ile, I)
n = 40 (7.83%)
Methionine (Met, M)
n = 31 (6.07%)
Proline (Pro, P)
n = 29 (5.68%)
Phenylalanine (Phe, F)
n = 42 (8.22%)
Tyrosine (Tyr, Y)
n = 22 (4.31%)
Tryptophan (Trp, W)
n = 16 (3.13%)
Aspartic acid (Asp, D)
n = 15 (2.94%)
Glutamic acid (Glu, E)
n = 10 (1.96%)
Asparagine (Asn, N)
n = 17 (3.33%)
Glutamine (Gln, Q)
n = 6 (1.17%)
Histidine (His, H)
n = 18 (3.52%)
Lysine (Lys, K)
n = 10 (1.96%)
Arginine (Arg, R)
n = 8 (1.57%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
17 23 27 9 9 28 6 9 6 0 3 11 15 4 14 28
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
4 0 1 11 16 12 1 6 17 19 4 6 16 7 0 5
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
13 18 0 8 11 6 2 2 2 11 11 2 0 7 10 4
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
14 8 2 7 8 9 1 2 2 4 0 0 0 0 0 14
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
144 113 138 117
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
75 132 98 207
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
26 192 182 112
COX2 (size: 684 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 11 (4.85%)
Alanine (Ala, A)
n = 15 (6.61%)
Serine (Ser, S)
n = 10 (4.41%)
Threonine (Thr, T)
n = 19 (8.37%)
Cysteine (Cys, C)
n = 3 (1.32%)
Valine (Val, V)
n = 13 (5.73%)
Leucine (Leu, L)
n = 32 (14.1%)
Isoleucine (Ile, I)
n = 23 (10.13%)
Methionine (Met, M)
n = 10 (4.41%)
Proline (Pro, P)
n = 15 (6.61%)
Phenylalanine (Phe, F)
n = 11 (4.85%)
Tyrosine (Tyr, Y)
n = 9 (3.96%)
Tryptophan (Trp, W)
n = 4 (1.76%)
Aspartic acid (Asp, D)
n = 11 (4.85%)
Glutamic acid (Glu, E)
n = 11 (4.85%)
Asparagine (Asn, N)
n = 7 (3.08%)
Glutamine (Gln, Q)
n = 7 (3.08%)
Histidine (His, H)
n = 6 (2.64%)
Lysine (Lys, K)
n = 4 (1.76%)
Arginine (Arg, R)
n = 6 (2.64%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
4 19 7 3 7 12 4 5 6 1 3 6 4 0 5 6
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
3 1 2 3 8 3 1 4 2 5 0 1 9 5 0 3
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
7 9 0 2 3 4 0 1 0 3 6 0 1 1 6 3
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
3 9 2 3 8 3 1 1 1 4 0 0 0 1 0 4
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
61 60 64 43
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
25 58 56 89
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
13 93 81 41
COX3 (size: 784 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 18 (6.92%)
Alanine (Ala, A)
n = 17 (6.54%)
Serine (Ser, S)
n = 20 (7.69%)
Threonine (Thr, T)
n = 22 (8.46%)
Cysteine (Cys, C)
n = 1 (0.38%)
Valine (Val, V)
n = 13 (5.0%)
Leucine (Leu, L)
n = 36 (13.85%)
Isoleucine (Ile, I)
n = 15 (5.77%)
Methionine (Met, M)
n = 12 (4.62%)
Proline (Pro, P)
n = 12 (4.62%)
Phenylalanine (Phe, F)
n = 22 (8.46%)
Tyrosine (Tyr, Y)
n = 11 (4.23%)
Tryptophan (Trp, W)
n = 12 (4.62%)
Aspartic acid (Asp, D)
n = 3 (1.15%)
Glutamic acid (Glu, E)
n = 7 (2.69%)
Asparagine (Asn, N)
n = 6 (2.31%)
Glutamine (Gln, Q)
n = 9 (3.46%)
Histidine (His, H)
n = 17 (6.54%)
Lysine (Lys, K)
n = 3 (1.15%)
Arginine (Arg, R)
n = 5 (1.92%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
7 8 9 3 8 19 2 4 9 0 1 6 6 0 9 13
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
3 1 0 2 11 4 0 2 9 3 4 2 6 4 0 3
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
9 9 1 2 5 9 0 0 4 4 7 2 0 2 4 3
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
14 6 1 3 0 3 0 1 2 2 0 0 0 0 0 10
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
58 75 62 66
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
40 67 56 98
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
13 106 97 45
CYTB (size: 1141 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 24 (6.33%)
Alanine (Ala, A)
n = 19 (5.01%)
Serine (Ser, S)
n = 26 (6.86%)
Threonine (Thr, T)
n = 38 (10.03%)
Cysteine (Cys, C)
n = 2 (0.53%)
Valine (Val, V)
n = 11 (2.9%)
Leucine (Leu, L)
n = 61 (16.09%)
Isoleucine (Ile, I)
n = 36 (9.5%)
Methionine (Met, M)
n = 14 (3.69%)
Proline (Pro, P)
n = 24 (6.33%)
Phenylalanine (Phe, F)
n = 29 (7.65%)
Tyrosine (Tyr, Y)
n = 16 (4.22%)
Tryptophan (Trp, W)
n = 12 (3.17%)
Aspartic acid (Asp, D)
n = 10 (2.64%)
Glutamic acid (Glu, E)
n = 4 (1.06%)
Asparagine (Asn, N)
n = 16 (4.22%)
Glutamine (Gln, Q)
n = 9 (2.37%)
Histidine (His, H)
n = 13 (3.43%)
Lysine (Lys, K)
n = 9 (2.37%)
Arginine (Arg, R)
n = 7 (1.85%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
10 26 13 3 18 29 3 6 9 0 1 4 6 0 7 22
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
1 0 2 2 12 5 0 3 12 6 3 6 8 8 2 2
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
18 17 1 2 9 11 0 0 4 3 13 0 2 1 15 1
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
12 4 0 4 6 9 0 0 3 3 1 0 0 0 0 12
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
68 106 117 89
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
49 103 77 151
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
13 184 138 45
ND1 (size: 956 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 12 (3.79%)
Alanine (Ala, A)
n = 26 (8.2%)
Serine (Ser, S)
n = 21 (6.62%)
Threonine (Thr, T)
n = 33 (10.41%)
Cysteine (Cys, C)
n = 1 (0.32%)
Valine (Val, V)
n = 9 (2.84%)
Leucine (Leu, L)
n = 62 (19.56%)
Isoleucine (Ile, I)
n = 24 (7.57%)
Methionine (Met, M)
n = 19 (5.99%)
Proline (Pro, P)
n = 21 (6.62%)
Phenylalanine (Phe, F)
n = 16 (5.05%)
Tyrosine (Tyr, Y)
n = 13 (4.1%)
Tryptophan (Trp, W)
n = 9 (2.84%)
Aspartic acid (Asp, D)
n = 3 (0.95%)
Glutamic acid (Glu, E)
n = 11 (3.47%)
Asparagine (Asn, N)
n = 15 (4.73%)
Glutamine (Gln, Q)
n = 6 (1.89%)
Histidine (His, H)
n = 3 (0.95%)
Lysine (Lys, K)
n = 7 (2.21%)
Arginine (Arg, R)
n = 7 (2.21%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
9 15 15 2 20 27 6 5 6 0 1 4 4 0 5 11
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
4 0 1 6 12 8 0 1 7 3 1 5 13 3 0 4
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
19 10 0 3 8 8 0 0 2 5 8 1 2 8 7 0
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
3 9 2 0 3 7 0 1 1 4 1 0 0 0 0 8
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
61 92 100 65
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
31 99 58 130
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
17 134 117 50
ND2 (size: 1042 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 13 (3.76%)
Alanine (Ala, A)
n = 19 (5.49%)
Serine (Ser, S)
n = 29 (8.38%)
Threonine (Thr, T)
n = 44 (12.72%)
Cysteine (Cys, C)
n = 0 (0%)
Valine (Val, V)
n = 11 (3.18%)
Leucine (Leu, L)
n = 66 (19.08%)
Isoleucine (Ile, I)
n = 31 (8.96%)
Methionine (Met, M)
n = 21 (6.07%)
Proline (Pro, P)
n = 22 (6.36%)
Phenylalanine (Phe, F)
n = 13 (3.76%)
Tyrosine (Tyr, Y)
n = 11 (3.18%)
Tryptophan (Trp, W)
n = 11 (3.18%)
Aspartic acid (Asp, D)
n = 1 (0.29%)
Glutamic acid (Glu, E)
n = 6 (1.73%)
Asparagine (Asn, N)
n = 20 (5.78%)
Glutamine (Gln, Q)
n = 10 (2.89%)
Histidine (His, H)
n = 3 (0.87%)
Lysine (Lys, K)
n = 12 (3.47%)
Arginine (Arg, R)
n = 4 (1.16%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
11 20 17 7 20 32 3 4 9 1 3 1 6 1 4 9
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
4 0 0 3 9 7 0 1 7 5 0 4 14 4 0 11
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
19 14 0 4 14 6 1 0 4 6 5 1 0 8 12 1
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
2 6 0 0 1 10 2 1 3 0 0 0 0 0 0 10
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
50 101 132 64
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
32 110 63 142
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
13 140 130 64
ND3 (size: 1042 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 13 (3.76%)
Alanine (Ala, A)
n = 19 (5.49%)
Serine (Ser, S)
n = 29 (8.38%)
Threonine (Thr, T)
n = 44 (12.72%)
Cysteine (Cys, C)
n = 0 (0%)
Valine (Val, V)
n = 11 (3.18%)
Leucine (Leu, L)
n = 66 (19.08%)
Isoleucine (Ile, I)
n = 31 (8.96%)
Methionine (Met, M)
n = 21 (6.07%)
Proline (Pro, P)
n = 22 (6.36%)
Phenylalanine (Phe, F)
n = 13 (3.76%)
Tyrosine (Tyr, Y)
n = 11 (3.18%)
Tryptophan (Trp, W)
n = 11 (3.18%)
Aspartic acid (Asp, D)
n = 1 (0.29%)
Glutamic acid (Glu, E)
n = 6 (1.73%)
Asparagine (Asn, N)
n = 20 (5.78%)
Glutamine (Gln, Q)
n = 10 (2.89%)
Histidine (His, H)
n = 3 (0.87%)
Lysine (Lys, K)
n = 12 (3.47%)
Arginine (Arg, R)
n = 4 (1.16%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
11 20 17 7 20 32 3 4 9 1 3 1 6 1 4 9
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
4 0 0 3 9 7 0 1 7 5 0 4 14 4 0 11
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
19 14 0 4 14 6 1 0 4 6 5 1 0 8 12 1
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
2 6 0 0 1 10 2 1 3 0 0 0 0 0 0 10
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
50 101 132 64
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
32 110 63 142
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
13 140 130 64
ND4 (size: 1378 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 17 (3.71%)
Alanine (Ala, A)
n = 28 (6.11%)
Serine (Ser, S)
n = 41 (8.95%)
Threonine (Thr, T)
n = 46 (10.04%)
Cysteine (Cys, C)
n = 2 (0.44%)
Valine (Val, V)
n = 12 (2.62%)
Leucine (Leu, L)
n = 97 (21.18%)
Isoleucine (Ile, I)
n = 39 (8.52%)
Methionine (Met, M)
n = 29 (6.33%)
Proline (Pro, P)
n = 24 (5.24%)
Phenylalanine (Phe, F)
n = 19 (4.15%)
Tyrosine (Tyr, Y)
n = 13 (2.84%)
Tryptophan (Trp, W)
n = 13 (2.84%)
Aspartic acid (Asp, D)
n = 3 (0.66%)
Glutamic acid (Glu, E)
n = 9 (1.97%)
Asparagine (Asn, N)
n = 23 (5.02%)
Glutamine (Gln, Q)
n = 10 (2.18%)
Histidine (His, H)
n = 14 (3.06%)
Lysine (Lys, K)
n = 11 (2.4%)
Arginine (Arg, R)
n = 9 (1.97%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
15 24 25 15 27 37 3 15 9 1 4 0 6 2 8 11
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
4 0 2 4 15 9 0 3 7 5 2 4 14 5 1 3
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
21 21 1 4 18 9 1 1 8 5 8 1 0 4 19 2
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
12 7 2 2 1 10 1 1 3 4 1 0 0 0 0 12
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
69 139 157 94
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
50 130 83 196
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
20 190 174 75
ND4L (size: 297 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 4 (4.08%)
Alanine (Ala, A)
n = 8 (8.16%)
Serine (Ser, S)
n = 8 (8.16%)
Threonine (Thr, T)
n = 6 (6.12%)
Cysteine (Cys, C)
n = 3 (3.06%)
Valine (Val, V)
n = 6 (6.12%)
Leucine (Leu, L)
n = 23 (23.47%)
Isoleucine (Ile, I)
n = 7 (7.14%)
Methionine (Met, M)
n = 10 (10.2%)
Proline (Pro, P)
n = 2 (2.04%)
Phenylalanine (Phe, F)
n = 3 (3.06%)
Tyrosine (Tyr, Y)
n = 4 (4.08%)
Tryptophan (Trp, W)
n = 0 (0%)
Aspartic acid (Asp, D)
n = 1 (1.02%)
Glutamic acid (Glu, E)
n = 2 (2.04%)
Asparagine (Asn, N)
n = 6 (6.12%)
Glutamine (Gln, Q)
n = 2 (2.04%)
Histidine (His, H)
n = 2 (2.04%)
Lysine (Lys, K)
n = 0 (0%)
Arginine (Arg, R)
n = 1 (1.02%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
4 3 9 3 4 13 1 2 2 0 0 2 3 1 2 1
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
1 1 2 3 2 3 0 1 1 2 0 0 2 0 0 1
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
4 1 0 1 3 4 0 0 0 2 2 0 0 1 5 0
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
2 2 0 0 1 0 0 1 0 0 0 0 0 1 0 0
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
21 28 29 21
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
8 24 18 49
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
3 34 42 20
ND5 (size: 1812 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 28 (4.64%)
Alanine (Ala, A)
n = 45 (7.46%)
Serine (Ser, S)
n = 49 (8.13%)
Threonine (Thr, T)
n = 57 (9.45%)
Cysteine (Cys, C)
n = 5 (0.83%)
Valine (Val, V)
n = 15 (2.49%)
Leucine (Leu, L)
n = 105 (17.41%)
Isoleucine (Ile, I)
n = 56 (9.29%)
Methionine (Met, M)
n = 27 (4.48%)
Proline (Pro, P)
n = 30 (4.98%)
Phenylalanine (Phe, F)
n = 40 (6.63%)
Tyrosine (Tyr, Y)
n = 17 (2.82%)
Tryptophan (Trp, W)
n = 12 (1.99%)
Aspartic acid (Asp, D)
n = 11 (1.82%)
Glutamic acid (Glu, E)
n = 9 (1.49%)
Asparagine (Asn, N)
n = 32 (5.31%)
Glutamine (Gln, Q)
n = 20 (3.32%)
Histidine (His, H)
n = 16 (2.65%)
Lysine (Lys, K)
n = 21 (3.48%)
Arginine (Arg, R)
n = 8 (1.33%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
17 39 25 14 31 44 7 8 18 2 0 8 5 2 18 22
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
2 0 5 10 18 16 1 7 11 8 2 9 14 7 0 11
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
22 23 1 6 15 15 1 2 10 3 14 1 1 7 25 4
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
12 8 1 2 9 21 0 1 4 3 0 0 0 1 0 11
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
108 170 205 121
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
65 169 127 243
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
21 259 213 111
ND6 (size: 525 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 29 (16.67%)
Alanine (Ala, A)
n = 8 (4.6%)
Serine (Ser, S)
n = 9 (5.17%)
Threonine (Thr, T)
n = 5 (2.87%)
Cysteine (Cys, C)
n = 2 (1.15%)
Valine (Val, V)
n = 31 (17.82%)
Leucine (Leu, L)
n = 19 (10.92%)
Isoleucine (Ile, I)
n = 12 (6.9%)
Methionine (Met, M)
n = 9 (5.17%)
Proline (Pro, P)
n = 4 (2.3%)
Phenylalanine (Phe, F)
n = 7 (4.02%)
Tyrosine (Tyr, Y)
n = 11 (6.32%)
Tryptophan (Trp, W)
n = 5 (2.87%)
Aspartic acid (Asp, D)
n = 3 (1.72%)
Glutamic acid (Glu, E)
n = 10 (5.75%)
Asparagine (Asn, N)
n = 5 (2.87%)
Glutamine (Gln, Q)
n = 0 (0%)
Histidine (His, H)
n = 0 (0%)
Lysine (Lys, K)
n = 2 (1.15%)
Arginine (Arg, R)
n = 3 (1.72%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
12 0 0 0 0 0 1 12 0 0 10 2 3 16 7 0
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
9 2 0 3 1 1 3 10 0 1 18 4 0 0 0 2
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
0 2 1 3 1 1 0 4 0 11 0 3 6 4 1 0
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
0 2 8 3 0 1 1 1 0 0 2 0 1 0 0 2
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
81 8 38 48
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
44 22 31 78
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
69 5 25 76
Total protein-coding genes (size: 11390 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 212 (5.59%)
Alanine (Ala, A)
n = 256 (6.75%)
Serine (Ser, S)
n = 267 (7.04%)
Threonine (Thr, T)
n = 349 (9.2%)
Cysteine (Cys, C)
n = 22 (0.58%)
Valine (Val, V)
n = 167 (4.4%)
Leucine (Leu, L)
n = 646 (17.03%)
Isoleucine (Ile, I)
n = 319 (8.41%)
Methionine (Met, M)
n = 207 (5.46%)
Proline (Pro, P)
n = 214 (5.64%)
Phenylalanine (Phe, F)
n = 220 (5.8%)
Tyrosine (Tyr, Y)
n = 135 (3.56%)
Tryptophan (Trp, W)
n = 104 (2.74%)
Aspartic acid (Asp, D)
n = 64 (1.69%)
Glutamic acid (Glu, E)
n = 89 (2.35%)
Asparagine (Asn, N)
n = 167 (4.4%)
Glutamine (Gln, Q)
n = 93 (2.45%)
Histidine (His, H)
n = 100 (2.64%)
Lysine (Lys, K)
n = 94 (2.48%)
Arginine (Arg, R)
n = 63 (1.66%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
123 196 167 68 156 278 44 85 85 8 28 48 64 27 86 134
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
40 7 15 51 126 73 6 40 77 61 34 45 114 51 4 55
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
150 138 6 36 94 82 6 11 38 55 80 13 15 48 119 20
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
80 70 19 24 40 86 8 10 22 26 5 0 1 4 1 91
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
788 1016 1186 804
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
451 1037 747 1559
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
237 1489 1361 707 

Error: F​a​i​l​e​d​ t​o​ u​n​d​e​r​s​t​a​n​d​ i​d​:​ ?​t​e​r​m​=​(​"​G​o​r​i​l​l​a​
F​a​i​l​e​d​ t​o​ u​n​d​e​r​s​t​a​n​d​ i​d​:​ g​o​r​i​l​l​a​"​[​O​r​g​a​n​i​s​m​]​)​
F​a​i​l​e​d​ t​o​ u​n​d​e​r​s​t​a​n​d​ i​d​:​ A​N​D​
F​a​i​l​e​d​ t​o​ u​n​d​e​r​s​t​a​n​d​ i​d​:​ (​r​e​f​s​e​q​[​f​i​l​t​e​r​]​
F​a​i​l​e​d​ t​o​ u​n​d​e​r​s​t​a​n​d​ i​d​:​ A​N​D​
F​a​i​l​e​d​ t​o​ u​n​d​e​r​s​t​a​n​d​ i​d​:​ m​i​t​o​c​h​o​n​d​r​i​o​n​[​f​i​l​t​e​r​]​)​
Contact: Vadim E. Fraifeld, MD, PhD

Head: Lab for the Biology of Aging, The Shraga Segal Department of Microbiology, Immunology and Genetics, Faculty of Health Sciences, Ben-Gurion University of the Negev
P.O. Box 653, Beer-Sheva 8410501, Israel

Email:
How to cite us:

If you would like to cite this database please use:
Toren D, Barzilay T, Tacutu R, Lehmann G, Muradian KK, Fraifeld VE. MitoAge: a database for comparative analysis of mitochondrial DNA, with a special focus on animal longevity. Nucleic Acids Res. 2016; 44(D1):D1262-5.