Viewing data for Trachemys scripta
| Scientific name | Trachemys scripta |
| Common name | Common slider |
| Maximum lifespan | 41.30 years (Trachemys scripta@AnAge) |
| Total mtDNA (size: 16810 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 6511 | 10299 | 4350 | 2161 | 4537 | 5762 |
| Base content per 1 kb (bases) | 387 | 613 | 259 | 129 | 270 | 343 |
| Base content (%) | 38.7% | 61.3% | ||||
| Total protein-coding genes (size: 11381 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 4455 | 6926 | 3135 | 1320 | 3118 | 3808 |
| Base content per 1 kb (bases) | 391 | 609 | 275 | 116 | 274 | 335 |
| Base content (%) | 39.1% | 60.9% | ||||
D-loop:
No data available for this section.
| Total tRNA-coding genes (size: 1552 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 591 | 961 | 349 | 242 | 420 | 541 |
| Base content per 1 kb (bases) | 381 | 619 | 225 | 156 | 271 | 349 |
| Base content (%) | 38.1% | 61.9% | ||||
| Total rRNA-coding genes (size: 2589 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 1026 | 1563 | 593 | 433 | 566 | 997 |
| Base content per 1 kb (bases) | 396 | 604 | 229 | 167 | 219 | 385 |
| Base content (%) | 39.6% | 60.4% | ||||
| 12S rRNA gene (size: 969 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 405 | 564 | 236 | 169 | 207 | 357 |
| Base content per 1 kb (bases) | 418 | 582 | 244 | 174 | 214 | 368 |
| Base content (%) | 41.8% | 58.2% | ||||
| 16S rRNA gene (size: 1620 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 621 | 999 | 357 | 264 | 359 | 640 |
| Base content per 1 kb (bases) | 383 | 617 | 220 | 163 | 222 | 395 |
| Base content (%) | 38.3% | 61.7% | ||||
| ATP6 (size: 684 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 261 | 423 | 191 | 70 | 196 | 227 |
| Base content per 1 kb (bases) | 382 | 618 | 279 | 102 | 287 | 332 |
| Base content (%) | 38.2% | 61.8% | ||||
| ATP8 (size: 189 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 62 | 127 | 50 | 12 | 54 | 73 |
| Base content per 1 kb (bases) | 328 | 672 | 265 | 63 | 286 | 386 |
| Base content (%) | 32.8% | 67.2% | ||||
| COX1 (size: 1545 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 637 | 908 | 376 | 261 | 461 | 447 |
| Base content per 1 kb (bases) | 412 | 588 | 243 | 169 | 298 | 289 |
| Base content (%) | 41.2% | 58.8% | ||||
| COX2 (size: 687 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 256 | 431 | 168 | 88 | 191 | 240 |
| Base content per 1 kb (bases) | 373 | 627 | 245 | 128 | 278 | 349 |
| Base content (%) | 37.3% | 62.7% | ||||
| COX3 (size: 784 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 331 | 453 | 216 | 115 | 214 | 239 |
| Base content per 1 kb (bases) | 422 | 578 | 276 | 147 | 273 | 305 |
| Base content (%) | 42.2% | 57.8% | ||||
| CYTB (size: 1140 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 464 | 676 | 335 | 129 | 321 | 355 |
| Base content per 1 kb (bases) | 407 | 593 | 294 | 113 | 282 | 311 |
| Base content (%) | 40.7% | 59.3% | ||||
| ND1 (size: 971 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 381 | 590 | 274 | 107 | 282 | 308 |
| Base content per 1 kb (bases) | 392 | 608 | 282 | 110 | 290 | 317 |
| Base content (%) | 39.2% | 60.8% | ||||
| ND2 (size: 1039 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 384 | 655 | 299 | 85 | 266 | 389 |
| Base content per 1 kb (bases) | 370 | 630 | 288 | 82 | 256 | 374 |
| Base content (%) | 37.0% | 63.0% | ||||
| ND3 (size: 350 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 138 | 212 | 96 | 42 | 100 | 112 |
| Base content per 1 kb (bases) | 394 | 606 | 274 | 120 | 286 | 320 |
| Base content (%) | 39.4% | 60.6% | ||||
| ND4 (size: 1381 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 529 | 852 | 390 | 139 | 366 | 486 |
| Base content per 1 kb (bases) | 383 | 617 | 282 | 101 | 265 | 352 |
| Base content (%) | 38.3% | 61.7% | ||||
| ND4L (size: 298 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 120 | 178 | 87 | 33 | 90 | 88 |
| Base content per 1 kb (bases) | 403 | 597 | 292 | 111 | 302 | 295 |
| Base content (%) | 40.3% | 59.7% | ||||
| ND5 (size: 1827 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 696 | 1131 | 495 | 201 | 513 | 618 |
| Base content per 1 kb (bases) | 381 | 619 | 271 | 110 | 281 | 338 |
| Base content (%) | 38.1% | 61.9% | ||||
| ND6 (size: 525 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 207 | 318 | 165 | 42 | 77 | 241 |
| Base content per 1 kb (bases) | 394 | 606 | 314 | 80 | 147 | 459 |
| Base content (%) | 39.4% | 60.6% | ||||
| ATP6 (size: 684 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
Amino acid frequencies:
Glycine (Gly, G)
n = 9 (3.96%) 
Alanine (Ala, A)
n = 12 (5.29%) 
Serine (Ser, S)
n = 14 (6.17%) 
Threonine (Thr, T)
n = 28 (12.33%) 
Cysteine (Cys, C)
n = 0 (0%) 
Valine (Val, V)
n = 7 (3.08%) 
Leucine (Leu, L)
n = 53 (23.35%) 
Isoleucine (Ile, I)
n = 20 (8.81%) 
Methionine (Met, M)
n = 17 (7.49%) 
Proline (Pro, P)
n = 14 (6.17%) 
Phenylalanine (Phe, F)
n = 9 (3.96%) 
Tyrosine (Tyr, Y)
n = 3 (1.32%) 
Tryptophan (Trp, W)
n = 4 (1.76%) 
Aspartic acid (Asp, D)
n = 1 (0.44%) 
Glutamic acid (Glu, E)
n = 4 (1.76%) 
Asparagine (Asn, N)
n = 11 (4.85%) 
Glutamine (Gln, Q)
n = 10 (4.41%) 
Histidine (His, H)
n = 3 (1.32%) 
Lysine (Lys, K)
n = 3 (1.32%) 
Arginine (Arg, R)
n = 5 (2.2%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 8 | 12 | 14 | 7 | 7 | 16 | 4 | 14 | 10 | 0 | 0 | 1 | 4 | 2 | 2 | 7 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 3 | 0 | 0 | 2 | 7 | 3 | 0 | 1 | 4 | 4 | 0 | 1 | 1 | 11 | 1 | 8 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 7 | 13 | 0 | 3 | 3 | 5 | 0 | 0 | 3 | 2 | 1 | 0 | 5 | 6 | 5 | 2 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 1 | 3 | 1 | 1 | 0 | 3 | 0 | 0 | 1 | 4 | 0 | 0 | 0 | 1 | 0 | 4 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 33 | 66 | 82 | 47 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 21 | 65 | 36 | 106 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 16 | 60 | 109 | 43 | ||||||||||||
| ATP8 (size: 189 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: MPQLNPDPWFLILSSSWLTYIIILQPKISSYLSTNNPTNKDNKTMHTDPWTWPWIQHSSINS* | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 0 (0%)
Alanine (Ala, A)
n = 0 (0%)
Serine (Ser, S)
n = 9 (14.52%)
Threonine (Thr, T)
n = 6 (9.68%)
Cysteine (Cys, C)
n = 0 (0%)
Valine (Val, V)
n = 0 (0%)
Leucine (Leu, L)
n = 6 (9.68%)
Isoleucine (Ile, I)
n = 7 (11.29%)
Methionine (Met, M)
n = 2 (3.23%)
Proline (Pro, P)
n = 7 (11.29%)
Phenylalanine (Phe, F)
n = 1 (1.61%)
Tyrosine (Tyr, Y)
n = 2 (3.23%)
Tryptophan (Trp, W)
n = 5 (8.06%)
Aspartic acid (Asp, D)
n = 3 (4.84%)
Glutamic acid (Glu, E)
n = 0 (0%)
Asparagine (Asn, N)
n = 6 (9.68%)
Glutamine (Gln, Q)
n = 3 (4.84%)
Histidine (His, H)
n = 2 (3.23%)
Lysine (Lys, K)
n = 3 (4.84%)
Arginine (Arg, R)
n = 0 (0%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 5 | 2 | 1 | 0 | 1 | 1 | 0 | 4 | 3 | 0 | 0 | 0 | 0 | 0 | 1 | 0 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 6 | 0 | 2 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 1 | 2 | 1 | 1 | 3 | 4 | 1 | 0 | 0 | 0 | 2 | 1 | 0 | 4 | 2 | 2 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 0 | 0 | 0 | 0 | 3 | 3 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 4 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 3 | 14 | 24 | 22 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 5 | 22 | 20 | 16 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 4 | 14 | 29 | 16 | ||||||||||||
| COX1 (size: 1545 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 47 (9.14%)
Alanine (Ala, A)
n = 43 (8.37%)
Serine (Ser, S)
n = 32 (6.23%)
Threonine (Thr, T)
n = 37 (7.2%)
Cysteine (Cys, C)
n = 1 (0.19%)
Valine (Val, V)
n = 38 (7.39%)
Leucine (Leu, L)
n = 60 (11.67%)
Isoleucine (Ile, I)
n = 38 (7.39%)
Methionine (Met, M)
n = 31 (6.03%)
Proline (Pro, P)
n = 28 (5.45%)
Phenylalanine (Phe, F)
n = 38 (7.39%)
Tyrosine (Tyr, Y)
n = 20 (3.89%)
Tryptophan (Trp, W)
n = 17 (3.31%)
Aspartic acid (Asp, D)
n = 15 (2.92%)
Glutamic acid (Glu, E)
n = 9 (1.75%)
Asparagine (Asn, N)
n = 15 (2.92%)
Glutamine (Gln, Q)
n = 7 (1.36%)
Histidine (His, H)
n = 20 (3.89%)
Lysine (Lys, K)
n = 10 (1.95%)
Arginine (Arg, R)
n = 8 (1.56%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 23 | 15 | 28 | 8 | 4 | 20 | 3 | 24 | 7 | 0 | 5 | 7 | 21 | 5 | 19 | 19 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 3 | 1 | 0 | 11 | 14 | 16 | 2 | 2 | 16 | 19 | 10 | 6 | 6 | 16 | 0 | 10 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 11 | 16 | 0 | 7 | 7 | 13 | 1 | 2 | 2 | 10 | 10 | 2 | 1 | 7 | 8 | 11 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 9 | 6 | 3 | 3 | 12 | 9 | 1 | 2 | 2 | 4 | 0 | 1 | 0 | 0 | 0 | 15 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 152 | 98 | 136 | 129 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 78 | 136 | 96 | 205 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 31 | 142 | 215 | 127 | ||||||||||||
| COX2 (size: 687 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 8 (3.51%)
Alanine (Ala, A)
n = 10 (4.39%)
Serine (Ser, S)
n = 14 (6.14%)
Threonine (Thr, T)
n = 17 (7.46%)
Cysteine (Cys, C)
n = 2 (0.88%)
Valine (Val, V)
n = 15 (6.58%)
Leucine (Leu, L)
n = 27 (11.84%)
Isoleucine (Ile, I)
n = 19 (8.33%)
Methionine (Met, M)
n = 18 (7.89%)
Proline (Pro, P)
n = 15 (6.58%)
Phenylalanine (Phe, F)
n = 10 (4.39%)
Tyrosine (Tyr, Y)
n = 10 (4.39%)
Tryptophan (Trp, W)
n = 5 (2.19%)
Aspartic acid (Asp, D)
n = 9 (3.95%)
Glutamic acid (Glu, E)
n = 14 (6.14%)
Asparagine (Asn, N)
n = 8 (3.51%)
Glutamine (Gln, Q)
n = 7 (3.07%)
Histidine (His, H)
n = 10 (4.39%)
Lysine (Lys, K)
n = 4 (1.75%)
Arginine (Arg, R)
n = 6 (2.63%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 13 | 6 | 17 | 1 | 6 | 8 | 1 | 11 | 7 | 0 | 1 | 4 | 8 | 2 | 6 | 4 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 1 | 0 | 2 | 2 | 3 | 3 | 2 | 1 | 0 | 7 | 0 | 3 | 3 | 8 | 1 | 5 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 5 | 7 | 0 | 1 | 5 | 6 | 0 | 1 | 1 | 6 | 4 | 0 | 0 | 2 | 6 | 3 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 7 | 13 | 1 | 5 | 4 | 4 | 0 | 1 | 0 | 4 | 1 | 0 | 0 | 1 | 0 | 5 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 56 | 54 | 68 | 51 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 23 | 54 | 63 | 89 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 9 | 60 | 109 | 51 | ||||||||||||
| COX3 (size: 784 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 19 (7.31%)
Alanine (Ala, A)
n = 18 (6.92%)
Serine (Ser, S)
n = 15 (5.77%)
Threonine (Thr, T)
n = 26 (10.0%)
Cysteine (Cys, C)
n = 2 (0.77%)
Valine (Val, V)
n = 15 (5.77%)
Leucine (Leu, L)
n = 33 (12.69%)
Isoleucine (Ile, I)
n = 15 (5.77%)
Methionine (Met, M)
n = 12 (4.62%)
Proline (Pro, P)
n = 13 (5.0%)
Phenylalanine (Phe, F)
n = 23 (8.85%)
Tyrosine (Tyr, Y)
n = 11 (4.23%)
Tryptophan (Trp, W)
n = 12 (4.62%)
Aspartic acid (Asp, D)
n = 4 (1.54%)
Glutamic acid (Glu, E)
n = 8 (3.08%)
Asparagine (Asn, N)
n = 5 (1.92%)
Glutamine (Gln, Q)
n = 8 (3.08%)
Histidine (His, H)
n = 15 (5.77%)
Lysine (Lys, K)
n = 2 (0.77%)
Arginine (Arg, R)
n = 5 (1.92%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 6 | 9 | 11 | 4 | 2 | 16 | 1 | 9 | 7 | 1 | 0 | 3 | 10 | 2 | 7 | 16 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 1 | 1 | 1 | 2 | 8 | 8 | 0 | 3 | 7 | 8 | 1 | 2 | 2 | 9 | 0 | 4 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 11 | 11 | 0 | 2 | 1 | 7 | 1 | 1 | 3 | 4 | 7 | 0 | 1 | 1 | 4 | 5 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 10 | 8 | 0 | 4 | 0 | 2 | 0 | 0 | 0 | 4 | 1 | 0 | 0 | 0 | 0 | 12 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 64 | 64 | 64 | 69 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 42 | 68 | 53 | 98 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 9 | 84 | 122 | 46 | ||||||||||||
| CYTB (size: 1140 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 26 (6.86%)
Alanine (Ala, A)
n = 21 (5.54%)
Serine (Ser, S)
n = 24 (6.33%)
Threonine (Thr, T)
n = 33 (8.71%)
Cysteine (Cys, C)
n = 3 (0.79%)
Valine (Val, V)
n = 13 (3.43%)
Leucine (Leu, L)
n = 64 (16.89%)
Isoleucine (Ile, I)
n = 36 (9.5%)
Methionine (Met, M)
n = 13 (3.43%)
Proline (Pro, P)
n = 23 (6.07%)
Phenylalanine (Phe, F)
n = 26 (6.86%)
Tyrosine (Tyr, Y)
n = 14 (3.69%)
Tryptophan (Trp, W)
n = 11 (2.9%)
Aspartic acid (Asp, D)
n = 8 (2.11%)
Glutamic acid (Glu, E)
n = 5 (1.32%)
Asparagine (Asn, N)
n = 22 (5.8%)
Glutamine (Gln, Q)
n = 9 (2.37%)
Histidine (His, H)
n = 11 (2.9%)
Lysine (Lys, K)
n = 9 (2.37%)
Arginine (Arg, R)
n = 8 (2.11%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 18 | 18 | 12 | 10 | 10 | 27 | 2 | 14 | 9 | 0 | 2 | 1 | 10 | 0 | 6 | 20 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 1 | 1 | 2 | 4 | 10 | 7 | 0 | 4 | 9 | 13 | 0 | 3 | 4 | 15 | 1 | 8 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 13 | 12 | 0 | 5 | 6 | 11 | 1 | 0 | 1 | 4 | 10 | 0 | 1 | 3 | 19 | 4 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 7 | 5 | 0 | 3 | 5 | 8 | 1 | 1 | 0 | 7 | 0 | 0 | 0 | 1 | 0 | 11 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 73 | 100 | 114 | 93 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 49 | 100 | 79 | 152 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 7 | 135 | 162 | 76 | ||||||||||||
| ND1 (size: 971 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 16 (4.97%)
Alanine (Ala, A)
n = 21 (6.52%)
Serine (Ser, S)
n = 30 (9.32%)
Threonine (Thr, T)
n = 17 (5.28%)
Cysteine (Cys, C)
n = 1 (0.31%)
Valine (Val, V)
n = 12 (3.73%)
Leucine (Leu, L)
n = 63 (19.57%)
Isoleucine (Ile, I)
n = 20 (6.21%)
Methionine (Met, M)
n = 24 (7.45%)
Proline (Pro, P)
n = 25 (7.76%)
Phenylalanine (Phe, F)
n = 21 (6.52%)
Tyrosine (Tyr, Y)
n = 14 (4.35%)
Tryptophan (Trp, W)
n = 8 (2.48%)
Aspartic acid (Asp, D)
n = 4 (1.24%)
Glutamic acid (Glu, E)
n = 11 (3.42%)
Asparagine (Asn, N)
n = 13 (4.04%)
Glutamine (Gln, Q)
n = 6 (1.86%)
Histidine (His, H)
n = 2 (0.62%)
Lysine (Lys, K)
n = 8 (2.48%)
Arginine (Arg, R)
n = 7 (2.17%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 7 | 13 | 24 | 5 | 9 | 32 | 3 | 14 | 4 | 2 | 3 | 0 | 9 | 0 | 6 | 15 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 0 | 1 | 0 | 6 | 8 | 7 | 0 | 3 | 3 | 10 | 0 | 4 | 4 | 16 | 1 | 1 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 10 | 6 | 0 | 7 | 9 | 12 | 0 | 0 | 2 | 7 | 7 | 1 | 0 | 4 | 9 | 0 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 2 | 10 | 1 | 1 | 3 | 8 | 0 | 0 | 0 | 6 | 1 | 0 | 0 | 0 | 0 | 7 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 64 | 89 | 84 | 86 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 34 | 91 | 58 | 140 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 9 | 94 | 165 | 55 | ||||||||||||
| ND2 (size: 1039 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 12 (3.48%)
Alanine (Ala, A)
n = 24 (6.96%)
Serine (Ser, S)
n = 28 (8.12%)
Threonine (Thr, T)
n = 54 (15.65%)
Cysteine (Cys, C)
n = 1 (0.29%)
Valine (Val, V)
n = 5 (1.45%)
Leucine (Leu, L)
n = 62 (17.97%)
Isoleucine (Ile, I)
n = 28 (8.12%)
Methionine (Met, M)
n = 27 (7.83%)
Proline (Pro, P)
n = 19 (5.51%)
Phenylalanine (Phe, F)
n = 10 (2.9%)
Tyrosine (Tyr, Y)
n = 10 (2.9%)
Tryptophan (Trp, W)
n = 11 (3.19%)
Aspartic acid (Asp, D)
n = 1 (0.29%)
Glutamic acid (Glu, E)
n = 5 (1.45%)
Asparagine (Asn, N)
n = 12 (3.48%)
Glutamine (Gln, Q)
n = 13 (3.77%)
Histidine (His, H)
n = 7 (2.03%)
Lysine (Lys, K)
n = 13 (3.77%)
Arginine (Arg, R)
n = 4 (1.16%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 14 | 14 | 27 | 7 | 3 | 36 | 1 | 15 | 12 | 1 | 0 | 1 | 4 | 0 | 4 | 6 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 0 | 0 | 1 | 8 | 8 | 7 | 1 | 2 | 2 | 7 | 1 | 1 | 4 | 14 | 0 | 11 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 19 | 24 | 0 | 4 | 8 | 10 | 0 | 2 | 4 | 3 | 7 | 0 | 0 | 4 | 8 | 3 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 4 | 5 | 0 | 1 | 0 | 13 | 0 | 0 | 1 | 3 | 0 | 0 | 0 | 0 | 0 | 11 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 47 | 90 | 140 | 69 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 34 | 119 | 61 | 132 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 4 | 90 | 188 | 64 | ||||||||||||
| ND3 (size: 1039 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 12 (3.48%)
Alanine (Ala, A)
n = 24 (6.96%)
Serine (Ser, S)
n = 28 (8.12%)
Threonine (Thr, T)
n = 54 (15.65%)
Cysteine (Cys, C)
n = 1 (0.29%)
Valine (Val, V)
n = 5 (1.45%)
Leucine (Leu, L)
n = 62 (17.97%)
Isoleucine (Ile, I)
n = 28 (8.12%)
Methionine (Met, M)
n = 27 (7.83%)
Proline (Pro, P)
n = 19 (5.51%)
Phenylalanine (Phe, F)
n = 10 (2.9%)
Tyrosine (Tyr, Y)
n = 10 (2.9%)
Tryptophan (Trp, W)
n = 11 (3.19%)
Aspartic acid (Asp, D)
n = 1 (0.29%)
Glutamic acid (Glu, E)
n = 5 (1.45%)
Asparagine (Asn, N)
n = 12 (3.48%)
Glutamine (Gln, Q)
n = 13 (3.77%)
Histidine (His, H)
n = 7 (2.03%)
Lysine (Lys, K)
n = 13 (3.77%)
Arginine (Arg, R)
n = 4 (1.16%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 14 | 14 | 27 | 7 | 3 | 36 | 1 | 15 | 12 | 1 | 0 | 1 | 4 | 0 | 4 | 6 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 0 | 0 | 1 | 8 | 8 | 7 | 1 | 2 | 2 | 7 | 1 | 1 | 4 | 14 | 0 | 11 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 19 | 24 | 0 | 4 | 8 | 10 | 0 | 2 | 4 | 3 | 7 | 0 | 0 | 4 | 8 | 3 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 4 | 5 | 0 | 1 | 0 | 13 | 0 | 0 | 1 | 3 | 0 | 0 | 0 | 0 | 0 | 11 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 47 | 90 | 140 | 69 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 34 | 119 | 61 | 132 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 4 | 90 | 188 | 64 | ||||||||||||
| ND4 (size: 1381 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 21 (4.58%)
Alanine (Ala, A)
n = 30 (6.54%)
Serine (Ser, S)
n = 34 (7.41%)
Threonine (Thr, T)
n = 55 (11.98%)
Cysteine (Cys, C)
n = 5 (1.09%)
Valine (Val, V)
n = 9 (1.96%)
Leucine (Leu, L)
n = 82 (17.86%)
Isoleucine (Ile, I)
n = 46 (10.02%)
Methionine (Met, M)
n = 29 (6.32%)
Proline (Pro, P)
n = 25 (5.45%)
Phenylalanine (Phe, F)
n = 18 (3.92%)
Tyrosine (Tyr, Y)
n = 15 (3.27%)
Tryptophan (Trp, W)
n = 15 (3.27%)
Aspartic acid (Asp, D)
n = 2 (0.44%)
Glutamic acid (Glu, E)
n = 10 (2.18%)
Asparagine (Asn, N)
n = 16 (3.49%)
Glutamine (Gln, Q)
n = 16 (3.49%)
Histidine (His, H)
n = 11 (2.4%)
Lysine (Lys, K)
n = 12 (2.61%)
Arginine (Arg, R)
n = 9 (1.96%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 24 | 22 | 28 | 9 | 17 | 41 | 0 | 15 | 15 | 1 | 1 | 0 | 7 | 1 | 6 | 12 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 1 | 0 | 5 | 10 | 10 | 10 | 0 | 6 | 1 | 11 | 3 | 2 | 3 | 20 | 0 | 8 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 15 | 32 | 0 | 2 | 7 | 17 | 0 | 2 | 6 | 6 | 9 | 2 | 0 | 2 | 14 | 8 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 3 | 10 | 0 | 1 | 1 | 11 | 1 | 0 | 1 | 8 | 0 | 0 | 0 | 0 | 0 | 13 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 72 | 128 | 166 | 94 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 58 | 136 | 82 | 184 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 9 | 126 | 238 | 87 | ||||||||||||
| ND4L (size: 297 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 4 (4.08%)
Alanine (Ala, A)
n = 5 (5.1%)
Serine (Ser, S)
n = 16 (16.33%)
Threonine (Thr, T)
n = 7 (7.14%)
Cysteine (Cys, C)
n = 3 (3.06%)
Valine (Val, V)
n = 2 (2.04%)
Leucine (Leu, L)
n = 21 (21.43%)
Isoleucine (Ile, I)
n = 5 (5.1%)
Methionine (Met, M)
n = 8 (8.16%)
Proline (Pro, P)
n = 3 (3.06%)
Phenylalanine (Phe, F)
n = 4 (4.08%)
Tyrosine (Tyr, Y)
n = 3 (3.06%)
Tryptophan (Trp, W)
n = 1 (1.02%)
Aspartic acid (Asp, D)
n = 1 (1.02%)
Glutamic acid (Glu, E)
n = 2 (2.04%)
Asparagine (Asn, N)
n = 2 (2.04%)
Glutamine (Gln, Q)
n = 5 (5.1%)
Histidine (His, H)
n = 4 (4.08%)
Lysine (Lys, K)
n = 0 (0%)
Arginine (Arg, R)
n = 2 (2.04%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 4 | 1 | 5 | 3 | 3 | 9 | 0 | 6 | 3 | 2 | 0 | 1 | 1 | 0 | 2 | 2 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 3 | 0 | 3 | 1 | 2 | 2 | 0 | 0 | 3 | 1 | 0 | 2 | 1 | 0 | 0 | 2 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 3 | 2 | 0 | 1 | 1 | 10 | 1 | 2 | 1 | 1 | 2 | 0 | 0 | 0 | 2 | 1 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 3 | 2 | 0 | 0 | 1 | 0 | 0 | 0 | 1 | 1 | 0 | 0 | 0 | 1 | 0 | 1 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 14 | 29 | 25 | 31 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 13 | 28 | 18 | 40 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 6 | 30 | 44 | 19 | ||||||||||||
| ND5 (size: 1827 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 31 (5.1%)
Alanine (Ala, A)
n = 46 (7.57%)
Serine (Ser, S)
n = 43 (7.07%)
Threonine (Thr, T)
n = 54 (8.88%)
Cysteine (Cys, C)
n = 10 (1.64%)
Valine (Val, V)
n = 19 (3.13%)
Leucine (Leu, L)
n = 94 (15.46%)
Isoleucine (Ile, I)
n = 56 (9.21%)
Methionine (Met, M)
n = 45 (7.4%)
Proline (Pro, P)
n = 27 (4.44%)
Phenylalanine (Phe, F)
n = 35 (5.76%)
Tyrosine (Tyr, Y)
n = 20 (3.29%)
Tryptophan (Trp, W)
n = 11 (1.81%)
Aspartic acid (Asp, D)
n = 12 (1.97%)
Glutamic acid (Glu, E)
n = 9 (1.48%)
Asparagine (Asn, N)
n = 25 (4.11%)
Glutamine (Gln, Q)
n = 16 (2.63%)
Histidine (His, H)
n = 14 (2.3%)
Lysine (Lys, K)
n = 31 (5.1%)
Arginine (Arg, R)
n = 10 (1.64%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 31 | 25 | 39 | 10 | 17 | 39 | 1 | 25 | 15 | 1 | 1 | 8 | 9 | 1 | 15 | 20 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 6 | 4 | 6 | 7 | 21 | 18 | 0 | 2 | 15 | 12 | 2 | 2 | 7 | 18 | 0 | 15 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 11 | 28 | 0 | 9 | 11 | 17 | 0 | 1 | 5 | 7 | 13 | 2 | 2 | 10 | 15 | 3 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 11 | 9 | 0 | 6 | 6 | 30 | 1 | 0 | 6 | 4 | 0 | 0 | 0 | 1 | 0 | 9 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 117 | 134 | 217 | 141 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 68 | 164 | 128 | 249 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 16 | 197 | 273 | 123 | ||||||||||||
| ND6 (size: 525 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 29 (16.67%)
Alanine (Ala, A)
n = 7 (4.02%)
Serine (Ser, S)
n = 17 (9.77%)
Threonine (Thr, T)
n = 3 (1.72%)
Cysteine (Cys, C)
n = 4 (2.3%)
Valine (Val, V)
n = 26 (14.94%)
Leucine (Leu, L)
n = 27 (15.52%)
Isoleucine (Ile, I)
n = 5 (2.87%)
Methionine (Met, M)
n = 10 (5.75%)
Proline (Pro, P)
n = 4 (2.3%)
Phenylalanine (Phe, F)
n = 16 (9.2%)
Tyrosine (Tyr, Y)
n = 12 (6.9%)
Tryptophan (Trp, W)
n = 4 (2.3%)
Aspartic acid (Asp, D)
n = 2 (1.15%)
Glutamic acid (Glu, E)
n = 4 (2.3%)
Asparagine (Asn, N)
n = 1 (0.57%)
Glutamine (Gln, Q)
n = 0 (0%)
Histidine (His, H)
n = 1 (0.57%)
Lysine (Lys, K)
n = 0 (0%)
Arginine (Arg, R)
n = 2 (1.15%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 5 | 0 | 3 | 2 | 0 | 0 | 1 | 10 | 0 | 0 | 12 | 1 | 2 | 11 | 16 | 0 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 7 | 4 | 0 | 4 | 0 | 1 | 2 | 10 | 1 | 8 | 10 | 3 | 0 | 0 | 1 | 0 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 0 | 1 | 2 | 10 | 0 | 3 | 0 | 4 | 0 | 9 | 3 | 2 | 14 | 1 | 0 | 1 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 0 | 2 | 2 | 2 | 0 | 0 | 0 | 1 | 0 | 1 | 0 | 0 | 1 | 0 | 0 | 2 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 68 | 10 | 24 | 73 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 44 | 27 | 20 | 84 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 53 | 5 | 33 | 84 | ||||||||||||
| Total protein-coding genes (size: 11418 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 226 (5.94%)
Alanine (Ala, A)
n = 244 (6.42%)
Serine (Ser, S)
n = 282 (7.42%)
Threonine (Thr, T)
n = 349 (9.18%)
Cysteine (Cys, C)
n = 33 (0.87%)
Valine (Val, V)
n = 163 (4.29%)
Leucine (Leu, L)
n = 617 (16.22%)
Isoleucine (Ile, I)
n = 307 (8.07%)
Methionine (Met, M)
n = 241 (6.34%)
Proline (Pro, P)
n = 211 (5.55%)
Phenylalanine (Phe, F)
n = 218 (5.73%)
Tyrosine (Tyr, Y)
n = 138 (3.63%)
Tryptophan (Trp, W)
n = 109 (2.87%)
Aspartic acid (Asp, D)
n = 65 (1.71%)
Glutamic acid (Glu, E)
n = 88 (2.31%)
Asparagine (Asn, N)
n = 138 (3.63%)
Glutamine (Gln, Q)
n = 102 (2.68%)
Histidine (His, H)
n = 100 (2.63%)
Lysine (Lys, K)
n = 97 (2.55%)
Arginine (Arg, R)
n = 68 (1.79%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 161 | 146 | 214 | 69 | 82 | 256 | 19 | 167 | 94 | 8 | 25 | 27 | 87 | 24 | 93 | 125 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 27 | 12 | 21 | 58 | 94 | 85 | 7 | 34 | 62 | 101 | 29 | 31 | 36 | 139 | 5 | 77 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 109 | 160 | 3 | 53 | 63 | 118 | 5 | 15 | 28 | 60 | 78 | 11 | 24 | 45 | 93 | 43 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 57 | 79 | 9 | 29 | 36 | 93 | 4 | 5 | 12 | 47 | 4 | 1 | 1 | 6 | 0 | 98 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 786 | 907 | 1177 | 934 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 481 | 1043 | 734 | 1546 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 180 | 1069 | 1745 | 810 | ||||||||||||
>NC_011573.1 Trachemys scripta mitochondrion, complete genome GTTATTGTAGCTTATCATAAAGCACGGCACTGAAGTTGCCAAGATGGGTAACCAATATACCCCAAAAACA CAAAGATTTGGTCCTAACCTTACTGTTATTTTTTGCTAAACTTACACATGCAAGTATCAGCACACCAGTG AAAACGCCCTAGCAATCTAATAAGACTGAAGGAGCCGGTATCAGGCACACCATGATAGCCCAAAACACCT AGCTTTAGCCACACCCCCAAGGGCACTCAGCAGTGATAAAAATTAAGCAATAAGCGAAAGCTTGACTTAG TCATAGCAAACATGAGCTGGTAAATCTCGTGCCAGCCACCGCGGTTACACAAGAAGCCCAAACTAACAGA CAACCGGCGTAAAATGTGATTAAAACTTTTAACCCATAAAATTAAGGTGAACTACTTACTTCGCTGTCAT ACGCAAAAGTATACATTAACACACTATGAAAATAACCTTAATATAAAGGAACTATTTGAACCCACGATCG CTAAAACACAAACTGGGATTAGATACCCCACTATGCTTAGCCCTAAACCTAGATATTTATATACAAAAAT ATCCGCCAGAGAATTACGAGCAAAACGCTTAAAACTCTAAGGACTTGGCGGTGCCTCAAACCCACCTAGA GGAGCCTGTTCTATAATCGATAACCCACGATCTACCTCACCATCTCTTGCCAACCAGCCTATATACCACC GTCGCCAGCTTACCCCGTGAGGATACAAAAGTAAGCAAGATAATATAAACCATTAACAAGTCAGGTCAAG GTGTAGCTAACTGAGATGGAAGAAATGGGCTACATTTTCTATACTAGAAATAACACTCACGGAAAGGAAC CATGAAACTAGTCCAGCAAGTAGGATTTAGCAGTAAACTGGGAACAGAGAGCCCAATTTAAACCGGTCCT GAGGTGCGCACACACCGCCCGTCACCCTCATCAATATACACCAATAACCCATAAATAAACTATAGCAAAT AAAACAGATGAGGCAAGTCGTAACAAGGTAAGTGCACCGGAAGGTGTACTTGGAATATCAAAACTATAGC TTAACAAAAAGCATTCAGCTTACACCTGAAAGATGTCTATTAAATACGAGACTATTTTGAGCAATTAAAT CTAGCCCAACAACAGACAATTAATCCCACCAAACAATAATTACACTACCAAAAACTTAACTAAAACATTC TACTATCTAAGTATAGGTGATAGAAAAGTAAAACAGGAGCAATAAAGATAGTACCGCAAGGGAAAGATGA AAAACATGAAAAACCACTAAGCAACAAAAAGCAAAGATTAACCCTTATACCTCTTGCATCATGATTTAAC CAGCACACTTAAGCAAAGAGAACTAAAGTCTAAACCCCCGAAACCAAGTGAGCTACTTAAAGGCAGCCAA TATCACAGGCTAAATCCGTCTCTGTGGCAAAAGAGTGGAAAGACCTATAAGTAGAAGTGAAAAGCCTATC GAACTTGGTGATAGCTGGTTGCTCAATAAATGAATGTAAGTTCAACCTTAAATCTTCTAAAAACAACCTA AAGTTTACCCAAAAGAAAAGTTTAAGATATATTCAATCGGGGTACAGCCCAATTGAAAAAGGACACAACC TAAAATGGAGGACAAAACACCAAAATATATTACTCCGTAGGCCTTAAAGCAGCCACCATCAAAGAAAGCG TCAAAGCCCACTATTATGTAAATACTAACATAAAACTTTTACCCCCAAATAATACTGAGCCATTCTACCC CTATAGAAGAACCAATGCTAAAATGAGTAACAAGAAGAAAAACTTCTCTTACGCGCCAGCTTAAATCATA ATAGATAAACTACTGATTATTAACAATTAATAATATATGAAACAACAACACTTAAAACACCATATAACTA AACTGTTAACCCGACACAGGAGCGCACATAAGAAAGATTAAAATCCGTAAAAGGAACTAGGCAAACTAAA CGAACCCGACTGTTTACCAAAAACATAGCCCCTAGCAACACACAAGTATTGGGGGTAATGCCTGCCCAGT GACACTGTTTTAAACGGCCGCGGTATCCTAACCGTGCAAAGGTAGCGTAATCACTTGTCTTCTAAATAAA GACTAGAATGAATGGCCAAACGAGGTTCTACCTGTCTCTTACAGATAATCAGTGAAATTGGTCTCCCCGT GCAAAAGCGAGGATAATCCTATAAGACGAGAAGACCCTGTGGAACTTTAAACACAAATCAACTACCATCA AACACCAAACTAAGGATTTATGACCAACTAGTATATGATCCACGTTTTCGGTTGGGGCGACCTCGGAGTA AAGCACAACCTCCGAAAAAAGAGCATACTTCTCTAAACCTAGACTTACAACTCAAAGTGCTAACAGCAAA AAGATCCAATATATTTGATCAACGAACTAAGCTACCCCAGGGATAACAGCGCAATCCCATCCTAGAGCCC TTATCGACGATGGGGTTTACGACCTCGATGTTGGATCAGGACATCCTGATGGTGAAACCGCTATCAAGGG TTCGTTTGTTCAACGATTAATAGTCCTACGTGATCTGAGTTCAGACCGGAGCAATCCAGGTCGGTTTCTA TCTATATGAATCTTGAGTCTTTTCTAGTACGAAAGGACCGAAAAGACAGGGCCTACATTAAAAACAAGCC TTACCTTACATTAGTGAAGACAACTAAACTAACAATTAAAATATTAAACCACAACTTCAAAATAAGAGTC ATTGGCGTGGCAGAGCTGGGCAAAATGCAAAAGGCCTAAACCCTTTATCCAGGGGTTCAACTCCCCTCCC CAATTATAAAACCTTTACTATCCAACTTAATACCCCCACTCATATATATAATCCCAATCTTAATTGCTGT TGCCTTCTTTACCCTATTAGAACGAAAAGTACTCGGATACATACAACTTCGAAAAGGACCCAACATCGTA GGCCCATATGGACTATTACAGCCAGTAGCAGACGGTGTAAAACTCTTCATCAAAGAACCAATTTATCCAC TAAATTCATCCACCACACTATTTATAATATCACCAATCCTAGCCCTATTATTAGCTTTATCAATTTGACT CCCACTACCCCTACCTTTCCCACTCGCTGACCTAAATCTAGGCCTCCTATTCCTAATCTCCTTATCTAGC TTCATAGTTTACTCTATCCTATGATCTGGTTGGGCTTCAAATTCTAAATACGCCTTAATAGGTGCCCTAC GAGCAGTAGCTCAGACCATCTCATATGAAGTAACCCTGGGAATTATCCTACTCTCATTAACTTTATTCTC AGGCGGATTTAACATACAAACATTCATAATTACACAAGAACCAATATACTTAATATTTTCATCCTGACCG CTGATAATAATATGATACATCTCCACACTAGCAGAAACAAATCGGGCACCATTCGACCTAACCGAAGGAG AATCCGAACTGGTATCCGGATTTAACGTTGAATACTCCGCCGGACCTTTTGCCCTATTCTTCCTAGCAGA GTATGCCAACATCCTAATAATAAACACCCTCACAACCATTCTATTCCTTAACCCAGCCTACATAAGCAAC ACCCCAGAACTATTCTCTCTATCACTAGTATCAAAAGTAATACTACTCTCAGCAGGATTCCTATGAATCC GAGCTTCTTATCCACGATTCCGATATGATCAACTTATACACCTACTATGAAAAAACTTCCTTCCCATTAC CCTAGCATTATGTCTTTGACACATATCAATACCAATCACCTCCTCTGGACTACCTCCAATACTATAGGAC ACGTGCCTGAACTAAAGGATTACCTTGATAGGGTGAATAATAGAGGCTAAAACCCTCTCGTTTCCTTAGA AAAATAGGACTCGAACCTACACCAGAGAGATCAAAACTCTCTATACTTCCAATTATACTACATTCTAGTA AAGTCAGCTAATTAAGCTATTGGGCCCATACCCCAAAAATGTTGGTTTAAACCCTTCCTCTACTAATAAA TCCATATGCAAGCATAATTATTACTTCAAGTCTAATTATAGGCCCCCTACTTACAGTATCTAGCAACCAC TGAATCTTAGCATGAACCGGTCTAGAAATCAGCACCCTAGCTATTATTCCATTAATCGCTAAACAACATC ACCCACGAGCAATTGAAGCAGCCACCAAATATTTCCTAACACAAGCAACTGCTTCAACACTAATCTTATT CTCAAGTATTATAAATGCCTGAACACTAGGACAATGAGATATTACACAAATATCTAATAACACTTCATGC ATTATTCTTACTACAGCTTTAGCCATCAAATTAGGGTTAGCTCCATTTCACTTTTGATTACCAGAAGTAC TACAAGGAACCACCACAATAACAGCCTTAATCTTAACTACCTGACAGAAATTAGCTCCACTATCCCTACT AGTAATAACCTCCCAATCCCTAAATACACCATTAATATTAGCGCTAGGACTAACATCCGCCCTAACCGGT GGATGATATGGACTAAACCAAACCCAACTGCGAAAAATCATAGCATCATCCTCTATCGCCCATCTAGGAT GAATAACCACAATCCTTACTCTATCCCCTAAACTCACACTACTTACATTCTACACATACACCATCATAAC CTCAACAACATTCCTAATAATTAAAACTTTAGAAACAAACATAATATCCGTAATAATAACATCATGAACA AAATTACCAACACTAAACACTATAATAATACTCACCCTTATATCACTAGCTGGCCTACCCCCACTAACAG GATTTATACCCAAATGATTAATTCTCCAAGAACTAACTAAACAACACATATTCATTATAGCCACTGCAAT AGCCCTAATCTCACTACTTAGCCTATTCTTTTACCTACGAATCTCATACTACACAACCATCACACTACCA CCAAACTCTACCAACTACCTACAACAATGACGCCATAAAACTAACAAAAAACCCTACCTAGCTATAATAA CCATACTATCCGTCACCCTTCTACCAATTACACCAACCCTACTAACCATCCCATAGAAACTTAGGATCAA ACCTATTAAACCAGAGGCCTTCAAAGCCCCAAACAAGAGATAGAACCTCTTAGTTTCTGTTAAGACCTAT AAGACTCTATCTTATATCTTATGAATGCAACTCAAACACTTTAATTAAGCTAAGGCCTTACTAGACAAAT GGGCCTCGATCCCATAACAATTTAGTTAACAGCTAAACACCCAATCCAGCGGGCTTTTGCCTACCTTTCC CGCTCTCTAAAAAGCGGGAAACCCCGACACCAACTAAAGTGTATCTTCAAATTTGCAATTTGACATGAAT TTCACTACGGGGTTTGATAAGAAGAGGAATTAAACCTCTGTCAAAAGGTCTACAGCCCAACGCTTAACCA CTCAGCCATCTTACCTGTGATTTTAACCCGCTGATTTTTCTCTACTAATCATAAAGACATTGGCACTTTA TACTTAATTTTTGGGGCCTGGGCAGGAATAGTAGGCACAGCATTAAGTTTATTGATCCGCGCAGAATTAA GCCAACCTGGGGCCCTTTTAGGGGATGACCAAATCTACAATGTTGTCGTCACAGCCCATGCTTTCATTAT AATTTTCTTCATAGTTATACCAATTATAATTGGCGGGTTTGGGAACTGACTCGTGCCATTAATAATTGGA GCGCCAGACATGGCATTTCCACGTATAAACAATATAAGTTTTTGGCTTTTACCCCCTTCATTATTATTAC TCCTAGCATCATCAGGAATTGAAGCAGGCACAGGCACAGGCTGAACTGTATACCCCCCATTAGCCGGAAA TTTAGCCCACGCCGGTGCCTCTGTAGACCTGACTATCTTTTCTCTTCATTTAGCAGGAGTATCTTCAATT CTAGGAGCTATTAACTTCATTACCACAGCAATTAACATAAAATCCCCAGCCATGTCACAATACCAAACAC CCCTATTTGTGTGATCAGTACTTATTACAGCTGTCCTATTATTACTATCGCTACCAGTCCTAGCTGCAGG CATCACTATACTATTAACAGACCGAAACCTAAATACAACTTTCTTTGACCCTTCAGGAGGGGGAGACCCA ATCTTATACCAACACTTATTCTGATTCTTTGGCCATCCTGAAGTATATATCCTAATCCTACCAGGATTTG GCATAATCTCCCATGTAGTCACCTATTACGCTGGCAAAAAAGAACCCTTTGGCTATATAGGAATAGTTTG AGCGATAATATCTATTGGATTTTTAGGCTTCATCGTGTGAGCCCACCACATATTTACCGTTGGGATAGAC GTAGACACCCGAGCCTATTTTACATCTGCAACAATAATTATCGCTATTCCAACAGGAGTAAAAGTATTCA GCTGATTAGCTACCCTGCACGGCGGAATAGTCAAATGAGATGCCCCTATACTATGAGCCCTTGGTTTCAT CTTCCTCTTTACTATCGGAGGGCTAACAGGCATCGTACTAGCCAACTCATCCTTAGACATTGTACTACAT GATACTTATTATGTAGTGGCACATTTCCACTATGTCCTATCAATAGGGGCTGTATTCGCTATTATAGCAG GATTTACCCACTGATTCCCACTTTTCACAGGATACTCACTGCACCAAACTTGAACAAAAGTACACTTTGG GGTAATATTTGCAGGAGTAAACATAACCTTTTTCCCCCAACATTTCCTAGGCCTTGCTGGAATGCCACGA CGTTACTCCGACTATCCAGACGCATACACTCTATGAAATTCTATTTCATCAATCGGATCCTTAATTTCCC TAGTAGCAGTAATTATAATAATATATATTATCTGAGAAGCATTCTCCTCAAAGCGAAAAGTTATAAAAGC TGAACTCACAACCACCAATGTAGAGTGACTTCATGGCTGTCCACCTCCCTACCATACCTATGAGGAGCCA GCCCATGTACTAAACCCAAGAAAGGAGGGAATCGAACCCCCTTAAATTAGTTTCAAGCCAATCACATAAC CTTTATGTTTCCTTCTCCCAAGACGTTAGTAAAATACATTACCTAACCTTGTCAAGGCTAAATTATAGGT TTAAATCCTTTACGACTTAATAGCGCACCCCCCCCTCCTAGGATTCCAAGACGCAATATCACCTATTATA GAAGAACTCCTCCACTTTCATGACCATACCTTAATAATTGTATTTTTAATTAGTACCCTAGTACTCTACA TCATCACACTAATAATAACAACAAAACTAACATATACCAACACTATAAATGCCCAAGAAGTAGAAATAAT TTGAACCATTTTACCGGCCATTGTCCTAATTACTATTGCACTCCCATCCCTACGAGTCCTCTACCTAATA GATGAAATTAATAACCCATATTTAACCATTAAAGCCATAGGACATCAATGATATTGAACATATGAATATA CTGACTATGAAAACCTTGAATTTGACTCCTACATAATTCCAACTCAAGATCTGCCAAACGGACACTTCCG ATTATTAGAAGTAGATCACCGTATAGTGATACCAATAGAATTACCCATTCGGATACTAATCTCAGCTGAA GATGTCTTACACTCATGAGCAGTGCCATCATTAGGTGTAAAAACAGATGCGGTCCCTGGACGATTAAACC AAACAACTTTCATCGTTTCACGACCTGGAGTATTTTACGGACAATGCTCAGAAATCTGCGGAGCTAACCA CAGCTTTATGCCAATCGTAATTGAGTCCGTACCATTACAACACTTCGAAAAATGATCTTCCATAATATTT TCCTAACCACTACAGAAGCTAAAAGGATTAGCGCTAGCCTTTTAAGCTAGAAAAAGAGAATTTCCGTCCT CCTTAGTGATTATGCCACAATTAAATCCAGACCCATGATTTCTAATCCTCTCCTCCTCATGATTAACGTA CATTATTATTTTACAACCAAAAATTTCATCCTACTTATCAACAAACAATCCTACCAACAAAGACAATAAA ACTATACATACAGACCCATGAACTTGGCCATGAATTCAACATTCTTCGATCAATTCATAAGCCCTCAAAT CCTAGGAATCCCACTGGCCATCCTAGCCTTATTAATACCCCCAATCATATTCCCAACCCTAAATAACCGA TGATTGACAAATCGCTTATCAACCATCCAACTATGAGCAATTAACTTATTCACAAAACAATTAATACTGC CAATCAATAAAATAGGCCACCAATGATCTATTATCTTGACATCACTTATAATCATACTCTTAACAACTAA TCTATTTGGACTCCTACCGTACACATTCACTCCAACCACACAACTCTCTATGAATATAGGAATAGCTATT CCAATGTGACTAGCTATAGTACTTTCCGGCCTCCGAAACCAACCAACTAAATCATTAGGACATCTACTAC CAGAAGGTACTCCAACCCTATTAACTCCAACTCTTATCATTATTGAAACAATTAGCCTTTTCATTCGACC ATTAGCCCTGGGCGTGCGACTTACAGCCAACTTAACAGCCGGCCATTTATTAATCCAACTCACTTCCACC GCAACACTCTCCCTATTATCAACAATACTTACCCTATCTATAATAACCACTGTAATCCTCCTATTGTTGA CAATCCTGGAGCTAGCCGTAGCAATAATTCAAGCCTATGTGTTTGTATTATTGCTAAGCCTATATCTTCA AGAAAACGTCTAATGACCCACCAGATACATGCCTACCATATAGTAGATCCAAGCCCATGACCACTAACAG GCGCAGCAGCAGCATTACTAATAACTTCAGGACTTGCCATATGATTTCACTACAACTCAACACTACTAAT AACCCTAGGCTTATTGACTATACTACTAACCATATTCCAATGATGACGAGATATCGTACGGGAAGGAACT TTCCAAGGACATCACACCCCTCCTGTACAAAAAAGTCTACGATATGGTATAATCCTATTCATCACATCAG AAGTATTCTTCTTCATTGGGTTTTTCTGAGCCTTTTATCACTCAAGCTTAGCCCCCACCCCAGAACTAGG TGGATGTTGACCACCAACAGGAATCACCCCACTAAACCCATTTGAAGTGCCCTTATTAAACACAGCAGTC CTGCTAGCTTCAGGAGTGACAATCACCTGAGCCCACCATAGCCTAATAGAAGCCAACCGAAATCAAACCA TTCAAGTCCTCACCCTTACAATCTTACTAGGCTTATACTTCACAGCATTACAAGCCATAGAATACTACGA AACTCCATTCACAATTTCTGATGGTGTATACGGCTCTACATTCTTTATCGCAACAGGCTTCCACGGACTT CATGTAATTATTGGCTCAATATTCTTAATTGTATGCCTTCTACGACAAATCAAATTCCACTTCACCTCCA CCCACCACTTCGGATTTGAAGCAGCTGCCTGATATTGACACTTCGTAGATGTCGTATGACTATTTCTCTA TGTATCGATCTACTGATGAGGCTCATACTCTTCTAGTATAATAGTACAAATGACTTCCAATCATTAAGTT TTAGTTGAAACCCTAAAGAAGAGTAATAAATGTAACAATCTCAACTATAACAATTGCCATTACCCTATCT ACAATCCTAATAACATTAAACTACTGGCTAACAATAATAAAACCAGATACCGAAAAACTATCCCCATACG AATGCGGGTTTGATCCATTAGAATCAGCCCGACTGCCATTCTCCATCCGGTTCTTCCTGAGTAGCAATCT TATTCCTCTTATTTGACCTAGAAATCGCACTACTCCTACCTCTACCATGAGCCATCCAACTCCCATCACC CACTTACACCTTTACTTGAGCTCTTATTATCTTACTACTTTTAACACTAGGACTTATCTATGAATGAATC CAAGGGGGCCTAGAATGAGCAGAGTAGATAGCTAGTCCAACATAAGACAACTAATTTCGACTTAGTTAAT CGTGATTAAACTCCACGGCTACCAAATGACACCTTTACATTTCAGCTACTACTCAGCCTTTATTGTCAGT ATCACAGGCCTCTCGTTACACCAAACTCACCTAATTTCAACCCTACTATGCCTCGAAAGTATAATACTAT CACTTTATATTGCACTATCAATATGACCTATTCAACTACAAACCTCATCATTTATGCTAACCCCCATGTT AATATTATCCTTCTCAGCCTGCGAAGCTGGCATAGGACTCTCATTACTTAGTAGCATCTTCACGAACTCA CGGCTCAGACCGCCTACAGAACTTAAACCTTCTACAGTGCTAAAAATTCTACTTCCAACATTTATATTAC TCCCAACAATCACACTCTGCAAGCCAAAACAACTTTGATCTACCATATCCATTAACACTTTCGGAATTGC TCTTCTAAGCATACAATGATTTAAACCTTCCCAAGAACTAACCATAAGTTTCTCCAACTACTATATAAGC ATTGACTACATCTCAGCTCCACTCCTCACCCTATCATGCTGACTCACCCCATTAACAATCCTAGCTAGTC AAAACCATCTTATTACAGAACCAATTCCACGAAAACAAACCTTCACCTTCATTATTATCCTATTACAAAT CTCACTAGTACTTGCCTTCTCAGCCACAGAACTAATCATATTCTTCATTATATTCGAAGCTACATTAATC CCAACACTAGCAATTATTACACGCTGGGGTAATCAAATAGAACGACTAAACGCTGGTACTTACTTCCTAT TCTACACCCTCATTGGATCTCTCCCACTACTAATCGCCCTCCTCTCCCTACAAAATCAAATTGGCACACT ATCCACTCACATAATCCAACTCAACCAACCTACTATATCAAACACATGAGCCCATACAACATGATGATTT GCATTACTAACTGCCTTTATAATCAAAATGCCACTTTATGGACTACATTTATGACTACCAAAAGCACATG TAGAAGCCCCAATCGCAGGATCAATAATCCTAGCAGCAGTACTACTCAAATTAGGGGGATATGGAATCAT TCGAATTATACCAACACTAAACCCCCTATCAAAAACACTCTCCTACCCATTTATAGTACTAGCATTATGA GGAGTAATTATAACTGGTTCAATCTGCCTACGACAAACAGATTTAAAATCACTAATTGCTTACTCATCAG TAAGCCACATAGGTCTTGTTATTGCTGCAACACTAACACAGACCCAATGAGCATACACAGGTGCTATTAC ACTTATAATCGCCCATGGATTAACATCATCAATACTCTTCTGCCTAGCCAACACAAACTACGAACGAACC CATAGCCGAACACTACTATTAGCCCGAAACATACAACTACTATACCCATTAATAAGCCTATGATGACTAC TCGCTAGCTTAGCCAACATAGCAATTCCACCAACTATTAACCTAATAGGAGAATTAACCATCATCACCTC ACTATTCAACTGGTCAAACATTACAATTCTAATAACAGGTTCAGGAACCATCATTACCGCTACATATACC CTATATATATTATCCACAACACAATGAGGAGGGACACCCTCATATATCAAAACAATACCACCAACCCATA CACGAGAACACCTTCTCATAATCCTCCATATCCTCCCCATAACACTACTAGTAATAAAACCAGAACTAAT CTGAGGGACTTTTTGCTGTTAATATAGTTTTAAAACAAACATTAGACTGTGGCTCTAAAAATAGGAGTTC AAACCTCCTTATAAACCGAGAGAGGTGTTTCACAATAAGAACTGCTAATTCCTATACCTGAGAATAATTC CCTCAGCTCTCTCGCTTTTAAAGGATAGAAGTAATCCATTGGTTTTAGAAACCATCCACCCTTGGTGCAA ATCCAAGTAAAAGTTCATGAAGAACTTTGCCAACATGTTCCTCCTATTAGCATTATTCACTCTCGCAATG CCAATTATTATATCACTTATATCAAAAGCATTGCTTATTCTAAAAACAGAATCAACTGTAAAAATAACAT TCTTCATCTCCTTATTTCCACTACTCCACTCAATACTATTTCCTGAACAAACCCTTTGTGACGTAACTTT ATTGGGCACATCCTTATTTTCTATTAAACTAAACTTCATTCACGACCAATATTCCGCCATTTTCATACCA ATCGCCCTATACGTCACATGAAATATCCTACAGTATTCTCGCTGATACATAATAGATAATCCACATATCG ACAAATTCTTTAAATACCTACTAATCTTCCTAATAGCCATAATAATTTTAATCACATCTAACAATCTATT CCAATTTTTCATTGGCTGGGAAGGAGTAGGAATCATATCCTTCTTACTCATTGGATGGTGACGCGGCCGA GAAGATACACTCGCATCAGCCTTAATAGCCATTATCTACAACCGCATTGGTGACTTAGGGTTATATATCG GCATGGTCTGACTCATTTCAAAAACAAACTCATTAAATTTTCAACCACCCTCATATACCAACCCCTCTCT AGTAATACTTATCGCTCTCATCCTAGCTGCAACTGGAAAATCAGCCCAATTCGGACTTCACCCATGATTA CCAGCAGCTATAGAAGGCCCAACCCCAGTCTCAGCACTACTACACTCCAGCACTATAGTTGTCGCCGGCA TTTTCCTACTTATCCGAATCCATCCCTTACTAGCATCCAATAATACAGCCCTCTCCACTTGCCTATGCTT AGGAGCTATTACCACATTCTTCGCATCATTATCTGCCCTATCCCAAAACGATATTAAAAAAATTATCGCT TACTCTACAACAAGCCAACTTGGCCTCATAATAGTCACCATCGGCCTAAACCAACCAGATTTAGCTTTCC TACACATCTGCATACACGCATTCTTTAAAGCCATATTATTTATATGCGCAGGCTTTATCATCCACAGCCT AGGCAATGAACAAGACATTCGAAAAATAGGAGGACTGCATAAACCCCTACCAATTACCTCCGCATGTTTA ACTATCGGCAACATAGCACTCATAGGTATACCATTTTTAACCGGATACTACTCTAAAGATGCCATCATTG AAACTATATCAACATCATACTTAAACTCCTGCGCCCTACTTCTAACACTAATAGCAACCTCATTTACTGC AGTCTATACACTACGAATTATGCTATTAGTGCAAACAGGACACCCCCTACAAAACTCCACATACCTCCTA CACGAAAATATTCCCACAATCATAAACCCAATTACTCGCCTCGCCACAGGCAGCATTATAGCCGGATGAC TAATTACAAAAAACATTCAAATATTCAATACACCAACAATAACTATGCCAATATGAATTAAAATTGCAGC ATTAACAGTAACAGTCATCGGCCTCCTAGTAGGACTAAAAGTAGTCTGTATAGCCACTAAAAAACCCCTA AAACCTTACAAAACTTGCGACCCAACCAGCATAGCCGCCTATCTCAACTACCTAGCCCACCGCAGTACAT CAAAAAAATACCTAAAAATAGCCCAAAAAATCGCAACCCACTTAGCTGATACATCTTGATTCGAATATCT TGGCCCAAAAGTAACAGCCAAATGACAAAAAACTCCAATACGCTTTACTTCTTTAATACAAAAAGGCCTC ATCAAAATTTACATAACCTCATTTCTCCTAACACTATGTGTAATAATTTTCACAATCATTTTATCAATAA TTCTCAATTTTCTTCTAGGGTAAATCCTATTGATAAAGCCCCTATCAATCAATTTAACCACGTAGCATAA ATAATCATAATTAAGAGAGGACGTTTATTGTCCTAGTTCAATGATGGCTACTGTTTAAAATTAACCCACA ACATCTAACCCCTAATAGAATGCAACGTCCCACAAGACAAGCCTCGAACCATCTCCAGCACAACAAATAA TGTTAACAACAACCCTCAACCAGAAATCAAAAACATCACACTACCATAATAATAAAACCATGAAACTCCA CTAAAATCCAAACGAATAACATACAATCCAACACCATCCGCCGTAGCTTCTCCAAACCCTTCCACACCGT ACAAAAAAGAACCTATAATCACAAGACCTGAAACAAGCAACACAAACCCCACCACATAAACCAACCCTCC TAAACTCCCCCAACCAACAGGATAAGGCTCAGCCACCAACGCAGATGAATAAGCAAAAACCACTAACATC CCCCCTAAGTAAATTAAAAACAATACCAAAGATATAAAAGATCCTCCTATACCAACCAACACCCCACATC CAGAAGCTGCTCCTAAGACTAAACTTAAAACCCCATAATAAGGAGACGGATTACAAGATACACCCACCAT TCAAAAAACAAAACAAAAACCAAATAAAAACATAAAGTACATCATAATTATTACTCGGATTTAAGCCGAG ACCTGTGGTTTGAAAAACCACCGTTGTACTCAACTATAATAAGACCAGACCAATGACCATAAACCTCCGA AAAACCCACCCACTAGCAAAAATCATCAACAACTCATTCATTGATCTACCAAGCCCCTCCAACATCTCTG CTTGATGAAACTTTGGATCCTTATTAGGTACTTGCCTAATCCTACAAATCCTTACCGGAATTTTCTTGGC TATACACTACTCCCCAGACATTTCACTAGCATTCTCATCAGTAGCCCACATCACCCGAGACGTACAATAC GGATGACTTATTCGTAATATACATGCTAACGGCGCCTCCCTCTTCTTCATATGCATCTACCTTCATATTG GACGAGGACTTTATTACGGCTCATATTTATACAAAGAAACCTGAAACACAGGAATTATCCTACTACTCCT AACAATAGCCACTGCATTCGTAGGCTATGTCCTACCATGAGGCCAAATATCCTTCTGAGGTGCAACCGTT ATTACTAATTTACTCTCGGCCATTCCATACATTGGTAACACATTAGTACAATGAATCTGAGGCGGATTCT CAGTAGACAACGCAACCCTGACCCGATTCTTTACCTTCCACTTTATCCTACCATTTGCCATTATAGGTCT AACATTAGTACACCTACTTTTCCTACATGAAACTGGATCAAACAACCCAACAGGATTAAACTCAAACATC GATAAAATCCCATTCCACCCTTACTTCTCATACAAAGACCTCCTAGGCATCATTTTAATACTAACCCTCC TACTAACTCTAACATTATTCTCTCCAAATCTCTTAGGAGACCCAGATAACTTCACACCAGCCAACCCCTT ATCCACCCCTCCGCATATTAAACCAGAATGATACTTTCTTTTCGCCTACGCAATTCTACGATCTATTCCA AACAAGCTAGGCGGAGTACTTGCCCTACTACTCTCTATCCTTGTACTGTTTCTAATACCCACTCTACACA CATCAAAACAACGAACAACCCAATTCCGACCACTTACACAAACCCTATTCTGATGTTTAATCGCTAACCT TTTAGTACTAACATGAATTGGAGGACAACCCGTTGAAAACCCATTCATTACAATCGGCCAAGTAGCCTCT ATTCTCTATTTCTCAACTATATTAATCCTCATCCCTGCCGCAGGCATAATTGAAAACAAAATACTAACTT AAAACATTCTAGTAGCTTAACCCATTAAAGCATTGGTCTTGTAAACCAAAGACTGAAGACTGCCAACCTT CCTAGAATAGTCAAAAGAGAAGGACTTTAACCCTCGTCCCCAGCTCCCAAAGCTGAGATCTTTTATTAAA CTACCTCTTGATGAGGTCTATCGGGCATAAACACTAAATACAAGCCCATTTTTATCTACTCTGCTCGGTA GAAATTTTGGTACCCCCCCCTCCCCCCCATTCGGGTCTATCGGGCATAAACACTAAATACAAGCCCATTT TTATCTACTCTGCTCGGTAGAAATTTTGGTACCCCCCCCTCCCCCCCATTCGGGTCTATCGGGCATAAAC ACTAAATACAAGCCCATTTTTATCTACTCTGCTCGGTAGAAAAATATCCATATAATACTCTCTATGTATT ATCGTGCATTCATTTATTTTCCGTTAGCATATCTTTAGCAATGTTAATGTTTAGTTTGACATTTACATGA ATTCATTAGTTTTACATAAGAATTATTTCAACATGAATATTATACAGGTATTATTAATATAATGATCTAT GGACATAAACTTAAATAGTTATTCTACACCATGACTATCGCCACAGTACCTGGTTATTTATTAATCTACC TAATCACGAGAAATAAGCAACCCTTGTTAGTAAGATGCAACATCACTAGTTTCACGTCCATATATAGGTG GCGTACATAACTGGTTTTTAAAAGGCCTCTGGTTGTTTTTTCAGGCACATTGTACTAATAGAGTTCATAC GTTTCCTTTTAAAAGGCCTCTGGTTAATGTGTTCTATACATTAAGTTTATAACCTGGCATATAGTGGTTT TACTTGCATATAGTATTTTTATTTTTCTCTGTGTCTTCAGGCCCTCATACCTGATACCTGCCGACTTGAT GAAACTGGACCCTCGTTCAAGTTGGTTGGTCTTGCATAACTGATATGGTATTATTTAATTAATGCTAGTA GGACATAAAATTTTGCAAAAACCTACGACAGTAATTTTTAACCTAAAACATCAAAACTACATATCTATTT AACCTAAACCCCCCTACCCCCCATATAAACTAACACCAGTCCGAATAGCCACTTTATCCTCGTCAAACCC CTAAATCCGAGGGCAACTAAACTGACATAATGTTAATTATGGTACTAAATTGAAATAAAAGTACCCATCA TATATATATATATAATATATAATATATATATAATATATAATATATATATATATATATATATATATATATA TATATATAAT
Contact: Vadim E. Fraifeld, MD, PhD
Head: Lab for the Biology of Aging, The Shraga Segal Department of Microbiology, Immunology and Genetics, Faculty of Health Sciences, Ben-Gurion University of the Negev
P.O. Box 653, Beer-Sheva 8410501, Israel
Email:
Head: Lab for the Biology of Aging, The Shraga Segal Department of Microbiology, Immunology and Genetics, Faculty of Health Sciences, Ben-Gurion University of the Negev
P.O. Box 653, Beer-Sheva 8410501, Israel
Email:
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If you would like to cite this database please use:
Toren D, Barzilay T, Tacutu R, Lehmann G, Muradian KK, Fraifeld VE. MitoAge: a database for comparative analysis of mitochondrial DNA, with a special focus on animal longevity. Nucleic Acids Res. 2016; 44(D1):D1262-5.
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