Viewing data for Syncerus caffer


Scientific name Syncerus caffer
Common name African buffalo
Maximum lifespan 29.80 years (Syncerus caffer@AnAge)

Total mtDNA (size: 16359 bases) GC AT G C A T
Base content (bases) 6511 9848 4307 2204 4369 5479
Base content per 1 kb (bases) 398 602 263 135 267 335
Base content (%) 39.8% 60.2%
Total protein-coding genes (size: 11336 bases) GC AT G C A T
Base content (bases) 4565 6771 3176 1389 3089 3682
Base content per 1 kb (bases) 403 597 280 123 272 325
Base content (%) 40.3% 59.7%
D-loop: No data available for this section.
Total tRNA-coding genes (size: 1512 bases) GC AT G C A T
Base content (bases) 563 949 327 236 421 528
Base content per 1 kb (bases) 372 628 216 156 278 349
Base content (%) 37.2% 62.8%
Total rRNA-coding genes (size: 2524 bases) GC AT G C A T
Base content (bases) 979 1545 539 440 598 947
Base content per 1 kb (bases) 388 612 214 174 237 375
Base content (%) 38.8% 61.2%
12S rRNA gene (size: 955 bases) GC AT G C A T
Base content (bases) 385 570 214 171 222 348
Base content per 1 kb (bases) 403 597 224 179 232 364
Base content (%) 40.3% 59.7%
16S rRNA gene (size: 1569 bases) GC AT G C A T
Base content (bases) 594 975 325 269 376 599
Base content per 1 kb (bases) 379 621 207 171 240 382
Base content (%) 37.9% 62.1%

ATP6 (size: 681 bases) GC AT G C A T
Base content (bases) 280 401 197 83 180 221
Base content per 1 kb (bases) 411 589 289 122 264 325
Base content (%) 41.1% 58.9%
ATP8 (size: 201 bases) GC AT G C A T
Base content (bases) 63 138 50 13 55 83
Base content per 1 kb (bases) 313 687 249 65 274 413
Base content (%) 31.3% 68.7%
COX1 (size: 1545 bases) GC AT G C A T
Base content (bases) 648 897 388 260 458 439
Base content per 1 kb (bases) 419 581 251 168 296 284
Base content (%) 41.9% 58.1%
COX2 (size: 684 bases) GC AT G C A T
Base content (bases) 262 422 163 99 187 235
Base content per 1 kb (bases) 383 617 238 145 273 344
Base content (%) 38.3% 61.7%
COX3 (size: 781 bases) GC AT G C A T
Base content (bases) 353 428 232 121 223 205
Base content per 1 kb (bases) 452 548 297 155 286 262
Base content (%) 45.2% 54.8%
CYTB (size: 1140 bases) GC AT G C A T
Base content (bases) 480 660 333 147 297 363
Base content per 1 kb (bases) 421 579 292 129 261 318
Base content (%) 42.1% 57.9%
ND1 (size: 957 bases) GC AT G C A T
Base content (bases) 388 569 275 113 260 309
Base content per 1 kb (bases) 405 595 287 118 272 323
Base content (%) 40.5% 59.5%
ND2 (size: 1042 bases) GC AT G C A T
Base content (bases) 392 650 290 102 275 375
Base content per 1 kb (bases) 376 624 278 98 264 360
Base content (%) 37.6% 62.4%
ND3 (size: 346 bases) GC AT G C A T
Base content (bases) 140 206 100 40 98 108
Base content per 1 kb (bases) 405 595 289 116 283 312
Base content (%) 40.5% 59.5%
ND4 (size: 1378 bases) GC AT G C A T
Base content (bases) 548 830 397 151 391 439
Base content per 1 kb (bases) 398 602 288 110 284 319
Base content (%) 39.8% 60.2%
ND4L (size: 297 bases) GC AT G C A T
Base content (bases) 110 187 73 37 94 93
Base content per 1 kb (bases) 370 630 246 125 316 313
Base content (%) 37.0% 63.0%
ND5 (size: 1821 bases) GC AT G C A T
Base content (bases) 721 1100 531 190 487 613
Base content per 1 kb (bases) 396 604 292 104 267 337
Base content (%) 39.6% 60.4%
ND6 (size: 528 bases) GC AT G C A T
Base content (bases) 199 329 160 39 107 222
Base content per 1 kb (bases) 377 623 303 74 203 420
Base content (%) 37.7% 62.3%

ATP6 (size: 681 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 11 (4.87%)
Alanine (Ala, A)
n = 16 (7.08%)
Serine (Ser, S)
n = 16 (7.08%)
Threonine (Thr, T)
n = 26 (11.5%)
Cysteine (Cys, C)
n = 0 (0%)
Valine (Val, V)
n = 12 (5.31%)
Leucine (Leu, L)
n = 44 (19.47%)
Isoleucine (Ile, I)
n = 23 (10.18%)
Methionine (Met, M)
n = 13 (5.75%)
Proline (Pro, P)
n = 12 (5.31%)
Phenylalanine (Phe, F)
n = 12 (5.31%)
Tyrosine (Tyr, Y)
n = 2 (0.88%)
Tryptophan (Trp, W)
n = 3 (1.33%)
Aspartic acid (Asp, D)
n = 1 (0.44%)
Glutamic acid (Glu, E)
n = 3 (1.33%)
Asparagine (Asn, N)
n = 9 (3.98%)
Glutamine (Gln, Q)
n = 8 (3.54%)
Histidine (His, H)
n = 6 (2.65%)
Lysine (Lys, K)
n = 4 (1.77%)
Arginine (Arg, R)
n = 5 (2.21%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
9 14 10 6 6 19 3 9 7 1 1 2 9 0 6 6
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
3 0 0 4 7 5 0 0 4 5 2 1 4 7 0 3
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
6 16 1 1 2 4 1 3 5 1 1 0 1 3 6 1
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
5 3 0 0 1 3 1 1 1 3 0 0 0 1 0 3
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
43 65 83 36
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
27 62 34 104
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
13 70 104 40
ATP8 (size: 201 bases)
Amino acid sequence: MPQLDTSTWLTMILSMFLVLFIIFQLKISKHNFHYNPELTPTKTSKQNTPWEAKWTKIYLPLSLPL*
Amino acid frequencies:
Glycine (Gly, G)
n = 0 (0%)
Alanine (Ala, A)
n = 1 (1.52%)
Serine (Ser, S)
n = 5 (7.58%)
Threonine (Thr, T)
n = 8 (12.12%)
Cysteine (Cys, C)
n = 0 (0%)
Valine (Val, V)
n = 1 (1.52%)
Leucine (Leu, L)
n = 11 (16.67%)
Isoleucine (Ile, I)
n = 5 (7.58%)
Methionine (Met, M)
n = 3 (4.55%)
Proline (Pro, P)
n = 6 (9.09%)
Phenylalanine (Phe, F)
n = 4 (6.06%)
Tyrosine (Tyr, Y)
n = 2 (3.03%)
Tryptophan (Trp, W)
n = 3 (4.55%)
Aspartic acid (Asp, D)
n = 1 (1.52%)
Glutamic acid (Glu, E)
n = 2 (3.03%)
Asparagine (Asn, N)
n = 3 (4.55%)
Glutamine (Gln, Q)
n = 3 (4.55%)
Histidine (His, H)
n = 2 (3.03%)
Lysine (Lys, K)
n = 6 (9.09%)
Arginine (Arg, R)
n = 0 (0%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
4 1 2 1 1 4 0 4 2 1 0 1 0 0 1 3
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
1 0 0 0 0 1 0 0 0 0 0 2 1 3 0 0
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
1 6 1 0 0 4 1 0 0 2 0 0 1 1 2 0
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
2 2 0 0 1 6 0 0 0 0 0 0 0 1 0 3
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
5 17 25 20
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
3 20 20 24
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
5 13 38 11
COX1 (size: 1545 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 47 (9.14%)
Alanine (Ala, A)
n = 40 (7.78%)
Serine (Ser, S)
n = 31 (6.03%)
Threonine (Thr, T)
n = 38 (7.39%)
Cysteine (Cys, C)
n = 1 (0.19%)
Valine (Val, V)
n = 38 (7.39%)
Leucine (Leu, L)
n = 58 (11.28%)
Isoleucine (Ile, I)
n = 37 (7.2%)
Methionine (Met, M)
n = 34 (6.61%)
Proline (Pro, P)
n = 28 (5.45%)
Phenylalanine (Phe, F)
n = 42 (8.17%)
Tyrosine (Tyr, Y)
n = 19 (3.7%)
Tryptophan (Trp, W)
n = 17 (3.31%)
Aspartic acid (Asp, D)
n = 16 (3.11%)
Glutamic acid (Glu, E)
n = 9 (1.75%)
Asparagine (Asn, N)
n = 19 (3.7%)
Glutamine (Gln, Q)
n = 6 (1.17%)
Histidine (His, H)
n = 17 (3.31%)
Lysine (Lys, K)
n = 9 (1.75%)
Arginine (Arg, R)
n = 8 (1.56%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
18 19 25 8 8 23 5 13 5 1 9 9 16 4 19 23
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
9 1 0 12 10 17 1 7 11 22 7 9 8 11 0 6
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
12 20 0 8 5 15 0 0 3 8 11 2 1 9 10 5
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
12 7 2 8 8 9 0 0 2 4 2 0 0 1 0 15
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
150 103 140 122
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
76 134 96 209
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
34 151 203 127
COX2 (size: 684 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 8 (3.52%)
Alanine (Ala, A)
n = 8 (3.52%)
Serine (Ser, S)
n = 21 (9.25%)
Threonine (Thr, T)
n = 18 (7.93%)
Cysteine (Cys, C)
n = 2 (0.88%)
Valine (Val, V)
n = 13 (5.73%)
Leucine (Leu, L)
n = 33 (14.54%)
Isoleucine (Ile, I)
n = 17 (7.49%)
Methionine (Met, M)
n = 17 (7.49%)
Proline (Pro, P)
n = 13 (5.73%)
Phenylalanine (Phe, F)
n = 6 (2.64%)
Tyrosine (Tyr, Y)
n = 11 (4.85%)
Tryptophan (Trp, W)
n = 5 (2.2%)
Aspartic acid (Asp, D)
n = 10 (4.41%)
Glutamic acid (Glu, E)
n = 15 (6.61%)
Asparagine (Asn, N)
n = 5 (2.2%)
Glutamine (Gln, Q)
n = 6 (2.64%)
Histidine (His, H)
n = 7 (3.08%)
Lysine (Lys, K)
n = 6 (2.64%)
Arginine (Arg, R)
n = 6 (2.64%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
10 7 13 4 2 15 4 6 6 0 4 3 5 1 4 2
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
4 1 1 2 1 4 1 1 3 2 2 3 2 7 1 3
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
4 11 0 4 3 8 1 1 4 7 4 0 2 1 4 2
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
5 13 2 4 6 5 1 1 0 5 0 0 0 1 0 5
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
54 57 68 49
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
26 55 61 86
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
19 51 106 52
COX3 (size: 781 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 20 (7.72%)
Alanine (Ala, A)
n = 15 (5.79%)
Serine (Ser, S)
n = 20 (7.72%)
Threonine (Thr, T)
n = 23 (8.88%)
Cysteine (Cys, C)
n = 2 (0.77%)
Valine (Val, V)
n = 16 (6.18%)
Leucine (Leu, L)
n = 32 (12.36%)
Isoleucine (Ile, I)
n = 15 (5.79%)
Methionine (Met, M)
n = 10 (3.86%)
Proline (Pro, P)
n = 12 (4.63%)
Phenylalanine (Phe, F)
n = 24 (9.27%)
Tyrosine (Tyr, Y)
n = 11 (4.25%)
Tryptophan (Trp, W)
n = 12 (4.63%)
Aspartic acid (Asp, D)
n = 3 (1.16%)
Glutamic acid (Glu, E)
n = 8 (3.09%)
Asparagine (Asn, N)
n = 7 (2.7%)
Glutamine (Gln, Q)
n = 7 (2.7%)
Histidine (His, H)
n = 16 (6.18%)
Lysine (Lys, K)
n = 2 (0.77%)
Arginine (Arg, R)
n = 5 (1.93%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
6 9 8 6 5 12 3 6 7 0 2 6 5 3 8 16
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
2 1 1 2 11 2 0 3 10 5 2 5 3 4 0 4
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
7 12 0 4 4 6 0 0 6 7 4 2 0 2 5 4
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
12 6 2 1 2 2 0 1 1 3 0 0 0 0 0 10
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
62 66 63 69
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
45 64 54 97
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
14 102 88 56
CYTB (size: 1140 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 24 (6.33%)
Alanine (Ala, A)
n = 25 (6.6%)
Serine (Ser, S)
n = 24 (6.33%)
Threonine (Thr, T)
n = 26 (6.86%)
Cysteine (Cys, C)
n = 4 (1.06%)
Valine (Val, V)
n = 14 (3.69%)
Leucine (Leu, L)
n = 60 (15.83%)
Isoleucine (Ile, I)
n = 42 (11.08%)
Methionine (Met, M)
n = 16 (4.22%)
Proline (Pro, P)
n = 22 (5.8%)
Phenylalanine (Phe, F)
n = 24 (6.33%)
Tyrosine (Tyr, Y)
n = 16 (4.22%)
Tryptophan (Trp, W)
n = 12 (3.17%)
Aspartic acid (Asp, D)
n = 11 (2.9%)
Glutamic acid (Glu, E)
n = 6 (1.58%)
Asparagine (Asn, N)
n = 17 (4.49%)
Glutamine (Gln, Q)
n = 6 (1.58%)
Histidine (His, H)
n = 13 (3.43%)
Lysine (Lys, K)
n = 9 (2.37%)
Arginine (Arg, R)
n = 8 (2.11%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
16 26 13 1 19 27 3 10 5 1 2 3 9 0 3 21
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
3 0 4 6 4 14 1 2 4 16 2 1 6 14 1 2
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
5 17 2 2 7 11 1 0 3 7 9 0 0 4 13 4
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
9 5 1 4 7 9 0 0 0 8 0 1 0 0 0 12
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
80 99 114 87
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
52 94 78 156
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
15 140 171 54
ND1 (size: 957 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 12 (3.77%)
Alanine (Ala, A)
n = 28 (8.81%)
Serine (Ser, S)
n = 25 (7.86%)
Threonine (Thr, T)
n = 18 (5.66%)
Cysteine (Cys, C)
n = 1 (0.31%)
Valine (Val, V)
n = 15 (4.72%)
Leucine (Leu, L)
n = 56 (17.61%)
Isoleucine (Ile, I)
n = 30 (9.43%)
Methionine (Met, M)
n = 21 (6.6%)
Proline (Pro, P)
n = 22 (6.92%)
Phenylalanine (Phe, F)
n = 18 (5.66%)
Tyrosine (Tyr, Y)
n = 12 (3.77%)
Tryptophan (Trp, W)
n = 9 (2.83%)
Aspartic acid (Asp, D)
n = 3 (0.94%)
Glutamic acid (Glu, E)
n = 11 (3.46%)
Asparagine (Asn, N)
n = 12 (3.77%)
Glutamine (Gln, Q)
n = 7 (2.2%)
Histidine (His, H)
n = 3 (0.94%)
Lysine (Lys, K)
n = 7 (2.2%)
Arginine (Arg, R)
n = 8 (2.52%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
10 20 19 2 10 28 1 15 7 0 3 2 8 2 9 9
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
2 1 0 0 12 16 0 0 7 5 0 5 9 7 1 1
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
3 13 1 2 8 11 0 0 4 6 6 0 0 2 10 1
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
2 9 2 1 2 7 0 0 1 7 0 0 0 0 1 9
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
69 81 92 77
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
34 89 56 140
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
10 105 161 43
ND2 (size: 1042 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 14 (4.05%)
Alanine (Ala, A)
n = 19 (5.49%)
Serine (Ser, S)
n = 28 (8.09%)
Threonine (Thr, T)
n = 37 (10.69%)
Cysteine (Cys, C)
n = 0 (0%)
Valine (Val, V)
n = 14 (4.05%)
Leucine (Leu, L)
n = 55 (15.9%)
Isoleucine (Ile, I)
n = 31 (8.96%)
Methionine (Met, M)
n = 43 (12.43%)
Proline (Pro, P)
n = 21 (6.07%)
Phenylalanine (Phe, F)
n = 13 (3.76%)
Tyrosine (Tyr, Y)
n = 8 (2.31%)
Tryptophan (Trp, W)
n = 10 (2.89%)
Aspartic acid (Asp, D)
n = 2 (0.58%)
Glutamic acid (Glu, E)
n = 5 (1.45%)
Asparagine (Asn, N)
n = 17 (4.91%)
Glutamine (Gln, Q)
n = 10 (2.89%)
Histidine (His, H)
n = 5 (1.45%)
Lysine (Lys, K)
n = 12 (3.47%)
Arginine (Arg, R)
n = 3 (0.87%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
13 18 38 3 7 29 7 8 10 0 2 5 6 1 8 5
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
5 0 0 3 11 5 0 0 5 8 1 3 6 11 1 4
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
16 16 1 4 6 16 1 0 1 5 3 0 1 4 13 1
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
4 5 0 1 1 10 2 0 0 3 0 0 0 0 0 10
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
54 85 141 67
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
28 104 59 156
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
20 101 175 51
ND3 (size: 1042 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 14 (4.05%)
Alanine (Ala, A)
n = 19 (5.49%)
Serine (Ser, S)
n = 28 (8.09%)
Threonine (Thr, T)
n = 37 (10.69%)
Cysteine (Cys, C)
n = 0 (0%)
Valine (Val, V)
n = 14 (4.05%)
Leucine (Leu, L)
n = 55 (15.9%)
Isoleucine (Ile, I)
n = 31 (8.96%)
Methionine (Met, M)
n = 43 (12.43%)
Proline (Pro, P)
n = 21 (6.07%)
Phenylalanine (Phe, F)
n = 13 (3.76%)
Tyrosine (Tyr, Y)
n = 8 (2.31%)
Tryptophan (Trp, W)
n = 10 (2.89%)
Aspartic acid (Asp, D)
n = 2 (0.58%)
Glutamic acid (Glu, E)
n = 5 (1.45%)
Asparagine (Asn, N)
n = 17 (4.91%)
Glutamine (Gln, Q)
n = 10 (2.89%)
Histidine (His, H)
n = 5 (1.45%)
Lysine (Lys, K)
n = 12 (3.47%)
Arginine (Arg, R)
n = 3 (0.87%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
13 18 38 3 7 29 7 8 10 0 2 5 6 1 8 5
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
5 0 0 3 11 5 0 0 5 8 1 3 6 11 1 4
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
16 16 1 4 6 16 1 0 1 5 3 0 1 4 13 1
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
4 5 0 1 1 10 2 0 0 3 0 0 0 0 0 10
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
54 85 141 67
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
28 104 59 156
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
20 101 175 51
ND4 (size: 1378 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 18 (3.93%)
Alanine (Ala, A)
n = 28 (6.11%)
Serine (Ser, S)
n = 40 (8.73%)
Threonine (Thr, T)
n = 36 (7.86%)
Cysteine (Cys, C)
n = 3 (0.66%)
Valine (Val, V)
n = 17 (3.71%)
Leucine (Leu, L)
n = 96 (20.96%)
Isoleucine (Ile, I)
n = 39 (8.52%)
Methionine (Met, M)
n = 36 (7.86%)
Proline (Pro, P)
n = 20 (4.37%)
Phenylalanine (Phe, F)
n = 20 (4.37%)
Tyrosine (Tyr, Y)
n = 16 (3.49%)
Tryptophan (Trp, W)
n = 13 (2.84%)
Aspartic acid (Asp, D)
n = 4 (0.87%)
Glutamic acid (Glu, E)
n = 8 (1.75%)
Asparagine (Asn, N)
n = 23 (5.02%)
Glutamine (Gln, Q)
n = 11 (2.4%)
Histidine (His, H)
n = 11 (2.4%)
Lysine (Lys, K)
n = 10 (2.18%)
Arginine (Arg, R)
n = 10 (2.18%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
14 25 32 15 10 42 11 17 10 1 3 4 10 0 10 10
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
4 1 2 3 13 12 0 2 6 9 1 2 10 8 0 3
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
16 17 0 9 12 8 0 2 9 9 7 1 1 4 19 2
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
9 6 2 3 1 10 0 1 1 8 0 0 0 0 0 12
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
75 130 155 99
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
55 113 83 208
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
21 154 201 83
ND4L (size: 297 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 4 (4.08%)
Alanine (Ala, A)
n = 8 (8.16%)
Serine (Ser, S)
n = 10 (10.2%)
Threonine (Thr, T)
n = 6 (6.12%)
Cysteine (Cys, C)
n = 3 (3.06%)
Valine (Val, V)
n = 7 (7.14%)
Leucine (Leu, L)
n = 22 (22.45%)
Isoleucine (Ile, I)
n = 4 (4.08%)
Methionine (Met, M)
n = 12 (12.24%)
Proline (Pro, P)
n = 1 (1.02%)
Phenylalanine (Phe, F)
n = 4 (4.08%)
Tyrosine (Tyr, Y)
n = 4 (4.08%)
Tryptophan (Trp, W)
n = 0 (0%)
Aspartic acid (Asp, D)
n = 1 (1.02%)
Glutamic acid (Glu, E)
n = 2 (2.04%)
Asparagine (Asn, N)
n = 5 (5.1%)
Glutamine (Gln, Q)
n = 1 (1.02%)
Histidine (His, H)
n = 2 (2.04%)
Lysine (Lys, K)
n = 1 (1.02%)
Arginine (Arg, R)
n = 1 (1.02%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
3 1 10 5 0 13 2 2 1 0 1 1 4 1 1 3
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
2 0 3 1 3 4 0 1 1 2 0 1 0 0 0 1
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
0 5 0 3 4 2 0 0 1 2 2 0 0 2 3 0
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
2 1 1 1 0 1 0 0 0 1 0 0 0 1 0 0
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
22 25 29 23
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
9 24 17 49
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
6 24 47 22
ND5 (size: 1821 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 28 (4.62%)
Alanine (Ala, A)
n = 38 (6.27%)
Serine (Ser, S)
n = 45 (7.43%)
Threonine (Thr, T)
n = 56 (9.24%)
Cysteine (Cys, C)
n = 5 (0.83%)
Valine (Val, V)
n = 17 (2.81%)
Leucine (Leu, L)
n = 87 (14.36%)
Isoleucine (Ile, I)
n = 60 (9.9%)
Methionine (Met, M)
n = 46 (7.59%)
Proline (Pro, P)
n = 27 (4.46%)
Phenylalanine (Phe, F)
n = 46 (7.59%)
Tyrosine (Tyr, Y)
n = 19 (3.14%)
Tryptophan (Trp, W)
n = 12 (1.98%)
Aspartic acid (Asp, D)
n = 10 (1.65%)
Glutamic acid (Glu, E)
n = 12 (1.98%)
Asparagine (Asn, N)
n = 38 (6.27%)
Glutamine (Gln, Q)
n = 19 (3.14%)
Histidine (His, H)
n = 11 (1.82%)
Lysine (Lys, K)
n = 22 (3.63%)
Arginine (Arg, R)
n = 8 (1.32%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
18 42 42 7 19 47 5 7 18 1 4 7 5 1 15 31
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
4 1 4 3 17 18 0 5 10 13 0 4 14 9 0 6
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
19 30 1 9 10 13 1 3 9 12 7 1 2 11 27 4
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
7 10 2 3 7 20 2 1 4 3 0 0 0 1 0 11
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
105 143 234 125
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
65 154 132 256
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
20 234 247 106
ND6 (size: 528 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 26 (14.86%)
Alanine (Ala, A)
n = 6 (3.43%)
Serine (Ser, S)
n = 11 (6.29%)
Threonine (Thr, T)
n = 8 (4.57%)
Cysteine (Cys, C)
n = 2 (1.14%)
Valine (Val, V)
n = 24 (13.71%)
Leucine (Leu, L)
n = 19 (10.86%)
Isoleucine (Ile, I)
n = 16 (9.14%)
Methionine (Met, M)
n = 10 (5.71%)
Proline (Pro, P)
n = 3 (1.71%)
Phenylalanine (Phe, F)
n = 14 (8.0%)
Tyrosine (Tyr, Y)
n = 9 (5.14%)
Tryptophan (Trp, W)
n = 4 (2.29%)
Aspartic acid (Asp, D)
n = 4 (2.29%)
Glutamic acid (Glu, E)
n = 9 (5.14%)
Asparagine (Asn, N)
n = 4 (2.29%)
Glutamine (Gln, Q)
n = 1 (0.57%)
Histidine (His, H)
n = 0 (0%)
Lysine (Lys, K)
n = 4 (2.29%)
Arginine (Arg, R)
n = 1 (0.57%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
14 2 3 1 0 1 1 8 0 1 11 1 4 8 14 0
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
7 2 0 4 0 0 2 10 1 4 11 2 0 1 0 4
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
0 2 2 4 1 1 1 4 0 7 2 3 8 4 0 0
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
0 1 8 4 0 2 2 1 0 0 0 0 0 1 0 1
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
69 8 46 53
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
37 24 32 83
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
54 7 29 86
Total protein-coding genes (size: 11401 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 215 (5.66%)
Alanine (Ala, A)
n = 243 (6.4%)
Serine (Ser, S)
n = 282 (7.42%)
Threonine (Thr, T)
n = 311 (8.19%)
Cysteine (Cys, C)
n = 24 (0.63%)
Valine (Val, V)
n = 191 (5.03%)
Leucine (Leu, L)
n = 599 (15.77%)
Isoleucine (Ile, I)
n = 325 (8.56%)
Methionine (Met, M)
n = 267 (7.03%)
Proline (Pro, P)
n = 193 (5.08%)
Phenylalanine (Phe, F)
n = 236 (6.21%)
Tyrosine (Tyr, Y)
n = 132 (3.48%)
Tryptophan (Trp, W)
n = 104 (2.74%)
Aspartic acid (Asp, D)
n = 68 (1.79%)
Glutamic acid (Glu, E)
n = 96 (2.53%)
Asparagine (Asn, N)
n = 164 (4.32%)
Glutamine (Gln, Q)
n = 88 (2.32%)
Histidine (His, H)
n = 93 (2.45%)
Lysine (Lys, K)
n = 95 (2.5%)
Arginine (Arg, R)
n = 64 (1.69%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
140 185 221 61 95 271 47 108 81 7 42 45 83 21 103 133
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
46 8 16 41 96 101 5 31 62 93 29 39 65 85 4 40
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
92 170 9 50 63 102 7 13 47 75 57 9 17 50 114 24
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
69 73 23 31 37 87 8 6 11 45 2 1 0 7 1 95
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
813 912 1223 851
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
468 969 744 1618
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
235 1187 1623 754 

>NC_020617.1 Syncerus caffer mitochondrion, complete genome
GTTAATGTAGCTTAAAACCAAAGCAAGGCACTGAAAATGCCTAGATGAGTTTTCCCCAACTCCATAAACA
CATAGGTTTGGTCCCAGCCTTCCTGTTAACTCTTAATAAACTTACACATGCAAGCATCCACACCCCGGTG
AGAATGCCCTCTAGGTTAATAAAACCAAGAGGAGCGGGTATCAAGCACACACCTGTAGCTCACGACGCCT
TGCTTAACCACACCCCCACGGGAGACAGCAGTGACAAAAATTAAGCCATAAACGAAAGTTTGACTAAGTT
ATGTTAATAAGGGTTGGTAAATCTCGTGCCAGCCACCGCGGTCATACGATTAACCCAAGCTAACGGGAAC
ACGGCGTAAAATGTGTTAAAGCATCCTACTAAGTAGAGTTAAATTTTAATTAAGCTGTAAAAAGCCATAA
TTTCAATAAAAATAAATGACGAAAGTAACTCTATAGCAGCTGACACACTATAGCTAAGATCCAAACTGGG
ATTAGATACCCCACTATGCTTAGCCCTAAACACAGATAATTATATTAACAAAATTATTCGCCAGGGTACT
ACCGGCAATAGCCTAAAACTCAAAGGACTTGGCGGTGCTTTATATCCCTCTAGAGGAGCCTGTTCTATAA
TCGATAAACCCCGATAAACCTCACCAATTCTTGCTAATACAGTCTATATACCGCCATCTTCAGCAAACCC
TAAAAAGGTATAAAAGTAAGCACAATCACAATACATAAAAACGTTAGGTCAAGGTGTAACCTATGAAATG
GGAAGAAATGGGCTACATTTTCTATATCAAGAATACCCAATACGAAAGTTATTATGAAATTAATAGCCAA
AGGAGGATTTAGCAGTAAACTAAGAATAGAGTGCTTAGTTGAACCAGGCCATGAAGCACGCACACACCGC
CCGTCACCCTCCTCAAATAAACATAATGCATCCAATTCTATTCAAATGCACCAGCCACATGAGAGGAGAT
AAGTCGTAACAAGGTAAGCATACTGGAAAGTGTGCTTGGATAAATCAAGACATAGCTTAAATAAAGTATC
CAGTTTACACCTAGAAGATTTCATATACTATGAATGTCTTGAACTAAATCTAGCCCAAAACCTCACCCCA
ATAAACAACCAAAATAAAGTAAAACAAAACATTTAATCCCGAATTAAAGTATAGGAGATAGAAATATTAA
TTATGGCGCTATAGAGAAAGTACCGCAAGGGAACGATGAAAGAAAAGTCAAAGTACAAAAAAGCAAAGGT
TACCCCTTGTACCTCTTGCATAATGAACTAACTAGTACAAACTTAACAAAACGAATTTTAGCTAAGTAAC
CCGAAACCAGACGAGCTACCTACAAACAGTTTACCAAGAACTAACTCGTCTATGTAGCAAAATAGTGAGG
AGATTTGTAGGTAGAGGTGACATGCCTAACGAGCCTGGTGATAGCTGGTTGTCCAGAAAATGAATTTTAG
TTCAGCTTTAAAGATACCAAAAATTTAAACAAATCCCACTGTATCTTTAAAAGTTAGTCTAAAAAGGTAC
AGCCTTTTAGAAACGGATACAACCTTGACTAGAGAGTAAGATCTAATAACACCATAGTAGGCCTAAAAGC
AGCCACCAATTAAGAAAGCGTTAAAGCTCAACAATAAAAAAATACATAAATCCCAAAAATAAATAACCAA
CTCCTAGCCCCAATACTGGACTAATCTATTATAAAATAGATGCAATAATGTTAGTATGAGTAACAAGAAA
TATTTTCTCCTTGCATGAGTTTAAGTCAGTATCTGATAATATCCTGACTATTAACAGCTAATAAAAATAA
CCTAACAATAAATAATTTATTTATTATACTGTTAATCCAACACAGGAGTGCACTAAGGAAAGATTAAAAG
AAGTAAAAGGAACTCGGCAAACACAAACCCCGCCTGTTTACCAAAAACATCACCTCCAGCATCCCTAGTA
TTGGAGGCACTGCCTGCCCAGTGACAACCGTTAAACGGCCGCGGTATCCTGACCGTGCAAAGGTAGCATA
ATCACTTGTTCTCTAAATAAGGACTTGTATGAATGGCCACACGAGGGTTTCACTGTCTCTTACTTCCAAT
CAGTGAAATTGACCTTCCCGTGAAGAGGCGGGAATATACTAATAAGACGAGAAGACCCTATGGAGCTTTA
ACTAATCAGCCCAAAGAAAAATAAACCAAACCACCAAGGAATAACAATACCCTCCATGGGCTAACAGTTT
CGGTTGGGGTGACCTCGGAGAATAAAAAATCCTCCGAGCGATTTTAAAGATTAGACCTACAAGTCAAATC
ACTCTATCGCTTATTGATCCAAAAACTTGATCAACGGAACAAGTTACCCTAGGGATAACAGCGCAATCCT
ATTCAAGAGTCCATATCGACAATAGGGTTTACGACCTCGATGTTGGATCAGGACACCCTGATGGTGCAAC
CGCTATCAAAGGTTCGTTTGTTCAACGATTAAAGTCCTACGTGATCTGAGTTCAGACCGGAGTAATCCAG
GTCGGTTTCTATCTATTACGTATTTCTCCCAGTACGAAAGGACAAGAGAAATAAGGCCAACTTAAAACTA
AGCGCCTTAAGATAACTAATGAATTTATCTCAATTAATAGTACAATAAAGCCTGCCCTAGAAAAGGGCTT
AGTTAAGGTGGCAGAGCCCGGTAATTGCGTAAAACTTAAACTTTTATTAACCAGAGATTCAAATCCTCTC
CTTAACAAAATGTTTATAATCAATATACTAATATTAATCATCCCCATCTTATTAGCCGTGGCATTCCTCA
CATTAGTAGAACGAAAAGTATTAGGCTACATACAACTCCGAAAAGGCCCAAATGTTGTAGGCCCGTACGG
CCTACTCCAACCCATCGCCGATGCAATCAAACTTTTCATTAAAGAACCACTACGACCCGCCACATCCTCA
GTTTCAATATTTATCCTAGCACCTATTTTAGCCCTAAGCTTAGCCCTAACTATATGAATCCCCCTACCCA
TACCCTACCCCCTCATCAACATAAACCTAGGAGTTCTATTTATACTAGCCATATCAAGCCTAGCCGTATA
TTCCATCCTCTGATCAGGCTGAGCCTCCAACTCAAAATATGCATTAATTGGAGCCCTACGAGCAGTAGCA
CAAACAATCTCATATGAAGTAACACTAGCAATTATTCTACTATCTGTGCTCCTAATAAGCGGATCCTTCA
CCCTTTCTACATTAATTATCACACAAGAGCAAATATGACTAATCCTCCCAGCATGACCCCTAGCAATAAT
ATGATTTATCTCAACGTTAGCAGAGACAAACCGAGCCCCATTTGACCTCACCGAAGGAGAATCAGAACTA
GTCTCAGGCTTCAACGTAGAATACGCAGCAGGCCCTTTCGCCCTATTCTTCATAGCAGAATACGCAAACA
TTATCATGATAAACATTTTTACAGCAATCCTATTCCTAGGAACATCCCACAACCCATATATACCAGAACT
CTACACAATCAACTTTACCGTCAAATCCCTGCTACTCACAATTTCCTTTTTATGAATCCGAGCATCCTAT
CCTCGATTCCGCTATGACCAATTAATACATTTATTATGAAAAAACTTTCTACCCCTAACACTAGCCTTAT
GTATATGACACGTATCACTACCTATTATCCTATCAAGCATCCCTCCACAAACATAGGAAATATGTCTGAC
AAAAGAGTTACTTTGATAGAGTAAATAATAGAGGTTTAAATCCTCTTATTTCTAGGACTATAGGAGTTGA
ACCTAATCCTAAGAACCCAAAACTCTTCGTGCTCCCAATTACACCAAGTCCTAATAGTAAGGTCAGCTAA
TTAAGCTATCGGGCCCATACCCCGAAAATGTTGGTTTATACCCTTCCCGTACTAATAAACCCAATCATCT
TTATTATTATTCTATCAACTGTTATAATAGGAACCATTATTGTCATAATTAGCTCCCACTGATTACTCAT
CTGAATCGGATTTGAAATAAATATGCTTGCCATTATCCCCATTTTAATAAAAAATCACAATCCACGAGCC
ACAGAAGCATCAACTAAATATTTCCTAACCCAATCAACAGCCTCAATGCTATTAATAATAGCCGTCATCA
TCAACCTGATATTTTCAGGCCAATGAACCGTAATAAAACTATTCAATCCAGTGGCCTCAATACTCATAAC
AATGGCCCTTGCCATAAAACTAGGAATAGCCCCATTTCACTTTTGAGTCCCAGAAGTAACACAAGGCATT
CCCCTGTCCTCTGGCCTAATCTTGCTAACATGACAAAAACTAGCACCCATATCCGTACTCTATCAAATTT
CACCATCAATTAACCTAGACCTAATCCTAACCTTATCGGTACTATCAATCATGATCGGAGGCTGAGGCGG
ACTAAACCAAACACAACTACGAAAAATCATAGCCTATTCATCAATCGCTCATATAGGGTGAATAACAGCA
GTACTGCCATATAACCCCACCATAACACTACTAAACTTAACTATCTACATCATCATAACCTCAACCATAT
TTATACTGTTCATAGCTAACTCTACCACTACCACCCTATCACTATCACACACATGAAACAAAATACCGAT
CATAACCGTCCTAGTCCTCACCACCCTCCTATCAATAGGAGGACTCCCTCCCCTGTCAGGATTTATACCA
AAGTGAATAATTATTCAAGAAATAACGAAAAACGATAACGTTATCTTACCCACCCTAATAGCCATAACAG
CACTACTAAACTTATATTTCTACATACGACTCGCATACTCCACCACACTAACAATATTCCCTTCCACAAA
CAACATAAAAATAAAATGACAATTTTCCCCTACAAAGCAAATAACCCTTCTACCAACAATAGCTGTATTA
TCTGCCATGCTACTACCACTAACACCAATACTATCTCTGCTGGAATAGGAATTTAGGTTAAACAGACCAA
GAGCCTTCAAAGCCCTAAGCAAGTATAATTTACTTAATTCCTGATAAGGATTGCAAGACTATACCTTACA
TCAATTGAATGCAAATCAACCACTTTAATTAAGCTAAATCCTCACTAGACTGGTGGGCTCCACCCCCACG
AAACTTTAGTTAACAGCTAAACGCCCTAATCAACTGGCTTCAATCTACTTCTCCCGCCGCGAGAAAAAAA
AGGCGGGAGAAGCCCCGGCAGAATTTGAAGCTGCTTCTCTGAATTTGCAATTCAACGTGTAAATTCACTA
CAGGGCCTGGTAAAAAGAGGGCTCAAACCTCTGTCTTTAGATTTACAGTCTAATGCTTACTCAGCCACCT
TACCCATGTTCATCAACCGCTGATTATTTTCAACCAACCACAAAGATATCGGTACCCTGTATTTATTATT
CGGTGCCTGAGCCGGCATGGTAGGGACAGCCCTAAGCCTATTAATTCGCGCTGAACTAGGTCAACCCGGA
ACCCTACTCGGAGATGACCAAATCTACAACGTAGTCGTAACCGCACATGCATTTGTAATAATTTTCTTTA
TAGTAATACCAATCATGATTGGAGGGTTTGGCAATTGACTTGTCCCTCTAATAATTGGCGCTCCTGATAT
AGCATTTCCCCGGATAAACAATATGAGCTTCTGACTCCTTCCACCCTCTTTCCTACTACTTCTAGCATCA
TCCATAGTTGAAGCTGGGGCAGGAACAGGTTGAACTGTATATCCCCCTTTAGCAGGCAACCTAGCCCACG
CAGGAGCCTCAGTAGACTTAACTATCTTCTCTTTACATTTGGCAGGTGTCTCCTCAATCCTAGGAGCTAT
TAACTTTATCACAACAATTATTAACATAAAACCTCCTGCAATATCACAATATCAAACCCCCCTATTCGTG
TGATCCGTAATAATTACCGCCGTACTACTACTCCTTTCACTCCCTGTACTAGCAGCTGGCATTACAATAT
TACTTACAGATCGAAATCTAAATACAACTTTCTTTGACCCAGCAGGAGGAGGAGACCCCATCCTATACCA
ACACTTATTTTGATTCTTTGGGCACCCCGAAGTGTATATTCTTATTCTACCCGGGTTCGGTATGATCTCT
CACATTGTAACCTACTACTCAGGAAAAAAAGAACCATTTGGATACATAGGAATAGTTTGAGCTATGATAT
CAATTGGATTTTTAGGATTCATCGTATGGGCTCACCACATGTTCACAGTTGGAATAGACGTTGATACACG
GGCCTATTTTACATCAGCTACCATAATTATTGCTATCCCAACCGGGGTGAAAGTCTTTAGCTGACTAGCA
ACACTTCATGGGGGTAATATCAAATGATCTCCTGCTATAATATGGGCCCTGGGCTTCATCTTCCTCTTTA
CAGTAGGAGGCTTAACCGGAATTGTCCTAGCCAACTCTTCCCTCGACATCGTTCTCCACGACACATACTA
TGTCGTCGCACATTTCCACTATGTCCTTTCAATGGGAGCTGTGTTCGCCATTATAGGAGGATTTGTACAT
TGATTCCCACTATTTTCAGGCTACACTCTCAATGACACATGAGCTAAAATCCACTTCGCAATCATATTTG
TAGGCGTTAATATAACCTTCTTTCCACAGCACTTCTTAGGACTATCTGGCATGCCACGACGATACTCCGA
TTACCCAGATGCATACACAATATGAAATACTATCTCATCAATAGGCTCATTCATTTCTCTGACAGCAGTT
ATACTGATAGTTTTCATCATCTGAGAAGCATTCGCGTCTAAACGAGAGGTCTCAACTGTAGATTTAACCA
CAACAAATCTAGAATGACTGAACGGATGTCCTCCACCATACCACACATTTGAAGAGCCTACATATGTTAA
CCTAAAATAAGAAAGGAAGGAATCGAACCCCCTACTATTGGTTTCAAGCCAACATCATAACCACTATGTC
TCTCTCAATCATGAGATGTTAGTAAAACATTATATAACTTTGTCGAAGTTAAGTTACAAGTGAAAATCCT
GTACATCTCATATGGCATATCCTATACAACTAGGCTTTCAAGATGCAACATCTCCAATCATAGAAGAACT
ACTTCACTTTCACGACCATACACTAATAATCGTTTTCTTAATCAGCTCATTAGTGCTTTATATCATTTCA
CTAATACTGACAACAAAATTAACTCACACCAGTACAATAGATGCGCAAGAAGTAGAAACAATTTGAACTA
TTCTACCCGCTATTATCCTAATTCTAATTGCTCTTCCATCCCTACGAATTCTATATATAATAGATGAAAT
TAACAACCCATCTCTCACAGTAAAAACCATGGGACATCAATGATACTGAAGCTATGAATACACAGACTAT
GAAGACCTGAGCTTCGACTCCTACATAGTTCCAACATCAGAATTGAAGCCAGGAGAACTACGATTGTTAG
AAGTCGATAACCGAGTTGTACTGCCCATAGAAATAACAATCCGAATATTAGTCTCTTCTGAGGACGTATT
ACACTCATGAGCCGTACCTTCCCTAGGGCTAAAAACAGACGCAATTCCAGGTCGTCTGAACCAAACTACC
CTCATGTCAACCCGACCAGGCCTATATTATGGCCAATGCTCAGAGATCTGTGGGTCAAATCACAGCTTTA
TGCCTATTGTCCTTGAAATAGTTCCGCTAAAATACTTTGAAAAATGATCGGCATCAATACTATAAAATCA
CCAAGAAGCTATACAGCACTAGCCTTTTAAGTTAGAGATAGAGAACCATATGTTCTCCTTGGTGATATGC
CACAACTAGACACATCAACATGACTAACAATAATCTTATCGATATTCTTAGTCCTCTTCATTATTTTTCA
ACTAAAAATTTCAAAACACAACTTCCACTATAACCCAGAATTAACACCAACAAAAACATCAAAACAGAAT
ACCCCTTGAGAAGCAAAATGAACGAAAATTTATTTGCCTCTTTCATTACCCCTATAATCCTAGGCCTCCC
CCTCGTAACCCTTATCGTACTATTTCCCAGCCTACTATTCCCAACATCAAGTCGACTAGTAAGCAACCGC
CTTATTTCCCTCCAGCGATGAATGATCCAACTTGTATCAAAACAAATAATGAGTATTCACAATACCAAGG
GACAAACATGAACACTGATACTAATATCCTTGATCTTATTTATCGGGACAACAAACCTACTAGGCCTATT
ACCCCACTCATTTACACCAACCACACAACTATCGATAAACCTAGGCATAGCCATCCCCCTATGAGCAGGG
GCTGTAGTCACAGGCTTCCGTAACAAAACTAAAGCATCACTCGCCCATTTCTTACCACAAGGAACACCAA
CCCCACTAATCCCAATACTAGTTATTATTGAAACTATCAGCCTTTTCATTCAACCAGTAGCCCTTGCCGT
ACGACTAACAGCCAATATCACTGCAGGACACCTGTTAATTCACTTAATCGGAGGAGCTACACTTGCACTA
ATAAGCATCAGTACAACAACAGCTCTCATTACATTCATAATCTTAATCTTATTAACAATTCTAGAATTTG
CAGTAGCTATAATCCAAGCCTACGTATTTACCCTCCTAGTCAGCCTATATCTGCACGACAACACGTAATG
ACACACCAAACCCATGCTTACCACATAGTAAACCCAAGCCCTTGACCTCTTACAGGAGCCCTATCCGCCC
TATTAATAACATCCGGTTTAATCATATGATTTCACTTTAACTCAACAGCCCTGTTAATACTTGGCTTAAC
AACAAATATACTTACAATATATCAATGGTGACGAGATATTATCCGAGAAAGCACTTTCCAAGGACACCAC
ACCCCAGTTGTTCAAAAAGGCCTTCGCTATGGAATAATCCTCTTCATTATTTCCGAAGTCCTATTTTTTA
CCGGATTTTTCTGAGCATTCTATCACTCAAGCCTCGCCCCTACACCCGAACTAGGCGGCTGCTGACCTCC
AACAGGCATCAATCCTCTCAACCCCCTAGAAGTCCCACTACTCAACACCTCCGTCCTATTAGCCTCAGGG
GTCTCTATTACCTGGGCCCACCATAGCCTGATGGAAGGTAGCCGAAGCCACATATTACAAGCCCTGTTTA
TTACCATCACACTAGGGGTGTATTTCACACTACTACAAGCCTCAGAGTACTATGAGGCACCCTTCACTAT
CTCAGACGGAGTGTACGGCTCAACTTTCTTCGTAGCCACAGGCTTCCATGGCCTTCACGTGATCATTGGC
TCTACTTTCCTAATCGTCTGTTTCTTCCGTCAACTAAAATTCCATTTCACCTCTAACCACCACTTCGGCT
TTGAAGCCGCTGCCTGATACTGACACTTTGTAGACGTAGTCTGACTTTTCCTCTATGTATCTATCTATTG
ATGAGGTTCATATTCTTTTAGTATCAAACAGTACAGCTGACTTCCAATCAGCTAGTTTCGGTCCAACCCG
AAAAGGAATAATAAACCTGATACTAGCCCTCTTAACTAACTTTACACTAGCTACCCTACTTGTCATTATC
GCATTCTGACTCCCCCAACTAAATGCATACTCAGAAAAAACAAGCCCATATGAGTGCGGATTTGACCCCA
TAGGGTCAGCCCGCCTCCCTTTCTCCATAAAATTTTTTCTAGTAGCCATTACATTCCTCTTATTTGATCT
AGAAATTGCACTCCTCCTCCCACTACCATGAGCCTCACAAACAACCAATTTAAATACAATACTTACCATA
GCCCTCTTCCTAATTATTCTACTAGCCGTAAGCCTGGCCTATGAATGAACTCAAAAAGGACTAGAATGAA
CTGAATATGGTACTTAGTTTAAAATAAAATAAATGATTTCGACTCATTAGATTGTGATTAAACTCATAAT
TACCAAATGTCCCTGGTGTATATAAATATTATAATAGCATTCACAGTATCTCTTACAGGACTGCTAATAT
ACCGATCCCACCTTATATCCTCTCTACTATGCCTAGAAGGAATGATACTATCCCTATTCGTTATAGCTGC
CCTAACAATTCTTAACTCACACTTTACACTAGCCAGCATAATACCTATTATCTTATTAGTCTTCGCAGCC
TGCGAGGCAGCACTAGGTCTATCTCTACTAGTAATAGTATCAAACACATATGGCACTGATTACGTACAAA
ATCTTAACCTACTTAAATGCTAAAATACATTATCCCAACAATAATACTCATACCCCTAACCTGATTATCA
AAAAACAACATAATCTGAATTAATTCTACAGCCCATAGCCTACTAATCAGCCTTACAAGCCTACTCCTTA
TAAACCAATTCGGTGATAATAGCCTTAACTTCTCACTAACATTTTTCTCCGATTCTCTATCCACCCCACT
GCTAATCTTAACCATATGACTCCTTCCCCTAATACTAATAGCCAGCCAACACCACCTATCAAAAGAAAAC
CTAGCCCGAAAAAAACTATTTATTACTATACTAATTCTATTACAGTTATTCCTAATCATGACCTTTACCG
CCATAGAACTGATCTTCTTCTATATCTTATTTGAAGCAACACTAGTCCCAACACTTATCATTATCACCCG
ATGAGGAAACCAAACAGAACGCCTAAACGCCGGACTTTATTTTTTATTCTACACATTAACAGGCTCCCTG
CCCTTACTAGTTGCACTAGTCTACATCCAAAGCACAGTCGGATCCCTAAACTTCCTGCTACTTCAATACT
GAGTACAACCCATACCCAACTCCTGATCTAATATTTTCATATGACTAGCATGTATAATAGCCTTTATAGT
AAAAATACCACTATATGGCCTTCACCTCTGACTACCCAAAGCCCATGTAGAGGCTCCTATCGCAGGTTCT
ATGGTTCTTGCAGCAATCCTATTAAAACTAGGAGGATACGGCATGCTACGAATTACACTACTCCTAAACC
CAGTAACCGATTTTATAGCATATCCATTTATTTTACTATCCTTGTGGGGCATAATTATAACCAGCTCAAT
CTGCCTTCGTCAAACAGACCTAAAATCCCTCATCGCATATTCTTCTGTAAGCCACATAGCACTTGTCATC
GTAGCCATCCTCATCCAAACACCCTGAAGTTATATAGGGGCTACCGCTCTAATAATTGCCCACGGCCTTA
CATCCTCTATACTTTTCTGCCTAGCAAACTCCAACTATGAACGAATCCACAGTCGAACTATAATTCTAGC
CCGAGGCTTACAAACCCTTCTCCCACTAATAGCCACCTGATGACTACTTGCAAGCCTGACTAACCTAGCC
CTGCCCCCTACAATCAACCTGATCGGAGAGTTATTAGTAGTAATATCAACCTTTTCATGATCTAACACCA
CAATTATCTTAATAGGAGTAAACATAGTAATTACCGCCCTGTATTCCCTATATATACTGATCATAACCCA
ACGAGGAAAATACACCCACCACATCAACAACATCTCACCCTCCTTTACACGAGAAAATGCACTCATATCA
TTACACATCTTACCCTTACTACTCCTGTCTCTAAACCCAATAGTTATTCTAGGATCCCTGTACTGTAAAT
ATAGTTTAACAAAAACATTAGACTGTGAATCTAACAATAGAAGCCCATTGTCTTCTTATTTACCGAAAAA
GTACGCAAGAACTGCTAATTCTATGCCCCCATACCTAACAGTATGGCTTTTTCAAACTTTTAAAGGATAG
TAGTTATCCGTTGGTCTTAGGAACCAAAAAATTGGTGCAACTCCAAATAAAAGTAATAAACATATTTTCT
TCACTTATACTAACCACCCTATTCCTACTAACAATACCCATCATAATAACAAGCCTCAACACCTACAAAA
ACCCCAACTACCCACTCTACGTAAAAACAACCATCTCATGTGCCTTTATTACCAGCATAATTCCCACAAT
AATATTTATCCACACAGGCCAAGAAATAATTATTTCAAATTGACACTGACTGACAATCCAAACTCTCAAA
CTATCACTCAGCTTCAAAATAGATTATTTCTCAATAATATTTGTCCCAGTAGCACTGTTCGTCACATGGT
CTATCATAGAATTCTCAATATGATATATACACTCAGACCCCAATATTAACCAATTCTTCAAGTATCTACT
CCTGTTCCTTATCACAATACTTGTCCTTGTCACCGCAAATAACCTCTTTCAACTATTTATCGGTTGAGAA
GGCGTTGGAATTATATCATTCTTACTCATCGGATGATGATATGGACGAGCAGACGCAAACACAGCAGCTC
TACAAGCAATCCTATATAACCGCATTGGCGACATCGGATTTATTCTAGCAATAGCATGATTCCTAGCAAA
CCTCAACACCTGAGACCTCCAACAAATCTTCATACTAAACCCAGAAAACTCTAACATACCCCTAATAGGT
CTAGTACTAGCCGCAACAGGAAAATCTGCCCAATTTGGCCTCCATCCATGACTCCCTTCTGCAATAGAGG
GTCCAACCCCCGTCTCAGCACTACTCCACTCAAGTACAATAGTAGTAGCAGGCATTTTCCTACTAATCCG
CTTCTACCCACTAACAGAAAACAATAAACTCATTCAGTCTATCATGCTATGCCTAGGAGCCATCACCACA
TTATTTACAGCAATATGCGCCCTCACCCAAAATGATATCAAAAAAATCATCGCCTTCTCTACATCCAGTC
AATTAGGCCTTATAATAGTGACAATCGGCATCAACCAACCCTATCTAGCATTCCTCCATATCTGCACCCA
TGCCTTTTTCAAGGCCATGCTATTCATATGCTCTGGCTCCATTATCCACAGCCTGAATGACGAACAAGAC
ATTCGAAAAATAGGAGGTCTATTTAAAACTATACCATTCACCACAACAGCCCTCATTGTTGGCAGCCTCG
CACTAACAGGAATACCTTTCCTCACAGGATTCTACTCCAAAGATCTAATCATCGAAGCCGCCAACACGTC
GTATACCAACGCCTGAGCCCTATTAATAACACTAATCGCCACCTCTTTCACAGCCATTTATAGCACCCGT
ATCATTTTCTTCACACTTTTAGGACAACCCCGATTCCCCACCTTAATCACCATTAATGAAAATAACCCCT
ATCTAATTAATTCCATCAAACGCTTGCTAATCGGAAGCCTATTTGCAGGATTCATCATCTCCAACAACAT
CCCTCCAATAACAATCCCCCAAATAACTATGCCCCACTACCTAAAAACAATAGCTCTGATAGTTACAGTC
CTAGGCTTCATCCTAGCCCTAGAAATCAGCAACATAACTCAAAACCTAAAATTCAATTACCCCTCAAACG
CCTTTAAATTCTCCAACCTATTGGGATATTTTCCTACAATCATACATCGCCTAGCTCCCTATATAAACCT
ATCAATAAGTCAAAAACTAGCATCCTCCATTCTAGACCTAATCTGACTAGAAAACATCTTACCAAAAACC
ACTTCACTTATCCAAATAAAAACATCCACTATGGTTACAAACCAAAAAGGTCTAATCAAACTATATTTCC
TCTCCTTCCTAGTCACAATCACCATCAGCATAATCCTATTTAATTTCCACGAGTAATCTCCATGATAACC
ACAACACCGATCAATAAGGACCACCCAGTCACAATAACCAACCAAGTCCCATAACTGTATAAAGCCGCAA
TCCCCATAGCTTCCTCACTAAAAAACCCAGAATCTCCCGTATCATAAATTACCCAATCCCCTAAACCATT
AAACTCAAACACAATCTCCACCTCCTTATCCTTCAACACATAACAGACCATAAGAAACTCTATCAACAAA
CCAGTAACAAACGCTCCTAAAACAACTTTATTAGAAACTCAAATCTCAGGATACTGCTCTGTAGCCATAG
CCGTTGTATAACCAAAAACCACCATCATACCCCCTAAATAAATTAAAAAAACTATTAAGCCCAAAAAAGA
CCCACCAAAATTCAATACAATCCCACAACCAACCCCACCACTTACAATTAAACCCAGCCCCCCATAAATA
GGCGATGGTTTTGAAGAAAATCCCACAAAACCAATCACAAAAATAACACTCAAAATAAATACAATGTATA
GTATCATTATTCTCGCATGGAATTTAACCACGACTAATGATATGAAAAACCATCGTTGTCATTCAACTAC
AAGAACACCAATGACCCATATTCGAAAATCCCACCCACTAATAAAAATTCTAAACAACGCCTTCATTGAT
CTCCCAGCTCCATCAAACATCTCATCATGATGAAATTTTGGCTCCCTCCTAGGTATTTGCCTAATCTTAC
AAATCCTCACAGGCTTATTCCTAGCAATACATTACACATCAGATACAACAACAGCATTCTCTTCCGTCGC
CCACATCTGCCGAGACGTTAACTACGGATGAATTATTCGATACATGCACGCAAACGGAGCTTCAATATTC
TTCATCTGCTTATATATACACGTAGGACGAGGCCTATACTATGGATCCTACACTTTTTTAGAAACATGAA
ACATCGGAGTAATCCTCCTATTCACAGTAATAGCTACGGCATTCATAGGATATGTACTGCCATGAGGACA
AATATCATTCTGAGGGGCAACAGTAATTACTAATCTCCTCTCAGCAATCCCATATATCGGCACAAACCTA
GTCGAATGAATCTGAGGAGGATTCTCAGTAGATAAAGCAACCCTCACCCGATTCTTCGCTTTCCACTTCA
TCCTCCCATTCATTATTGCAGCACTTGCAATAATCCACCTATTATTTCTCCACGAAACAGGATCCAACAA
CCCAACAGGAATCTCATCAGACACAGACAAAATCCCATTCCACCCCTACTACACCATCAAAGACATCCTA
GGTGCTCTACTACTAATCCTAGCCCTAATACTATTAGTACTATTCTCACCCGATCTCCTCGGAGACCCAG
ACAACTACACCCCAGCAAATCCACTCAACACACCCCCTCATATCAAACCCGAATGATATTTCCTATTCGC
ATACGCGATCTTACGATCGATTCCCAACAAACTAGGGGGAGTTTTAGCCCTAATCCTCTCCATCCTAATC
CTCATTATTATACCCCTGCTACACACATCCAAACAACGAAGCATGATATTCCGACCACTCAGCCAATGCT
TATTCTGAATCCTAGTAGCAGACCTGCTAACACTCACATGAATTGGAGGACAGCCGGTCGAACATCCATA
TATTATCATTGGACAACTAGCATCTATTATATATTTCCTCCTCATCCTAGTACTAATACCAACAGCTAGC
ACGATCGAGAACAATCTCTTAAAATGAAGACAAGTCTTTGTAGTATATTAAATACACTGGTCTTGTAAAC
CAGAAAAGGAGAACAACCAACCTCCCCAAGACTCAGGGAAGAGGCTATAGCCCCACTACCAACACCCAAA
GCTGAAGTTCTATTTAAACTACTCCCTGAACACCGCCCTACCATTACTATTAATATAACCCCACAAATAT
AAAGAGCCTCCCCAGTATTAAATTCACTAAAACTTGCAACAATTCAACACAGACTTTGCACTCTAACCCA
ACATTAAAAATAACTATCAACCTCAACACACCACTACGAACCCACAGCACACGACACAAGGCCTACTACC
CCAAGCGGGGTAGGTACATAACATTAATGTAATAAAGACATGATATGTATATAGTACATTACATTATATA
CCCCATGCATATAAGCAAGTACAATATTTCAAGCTCTTACTAACAGTGTACAGTACATATCACCATTAAC
TGTACATGAAAACTTATGTCAAGCACATTCCCTTAATGGCATGGACTTCCCTCACCACTAGACCACGAGC
TTGTCTAGCATGCCGCGTGAAACCAGCAACCCGCTAGACAGGGATTTCTCTTCTCGCTCCGGGCCCATGT
AATGTGGGGGTAGCTATTTAATGAACTTTAACAGACATCTGGTTCTTTCTTCAGGGCCATCTCATCTAAA
ATCGCCCACTCTTTCCTCTTAAATAAGACATCTCGATGGACTAGTGACTAATCAGCCCATGCCTAACATA
ACTGTGCTGTCATACATTTGGTATTTTTTTATTTTTGGGGATGCTTGGACTCAGCTATGGCCGTCAAAGG
CCCCGACCCGGAGCATAAATTGTAGCTGGACTTAACTGCATCTTGAGCACCAGCATAATGGTAGGCATGG
GACATTACAGTCAATGGTCACAGGACATAACTATACTATATATTTCCCCCCTCCCCCTTAAATATTTACC
ACCATTTTCAACATGCTTCTCCCTAGCTACTTATTCAAACTTATCACATTTCCAATACTCAAATCAGCAC
TCCAAATAAAGTAACTATATAAGCACATAATCCTTTACCCCATTCTACA
Contact: Vadim E. Fraifeld, MD, PhD

Head: Lab for the Biology of Aging, The Shraga Segal Department of Microbiology, Immunology and Genetics, Faculty of Health Sciences, Ben-Gurion University of the Negev
P.O. Box 653, Beer-Sheva 8410501, Israel

Email:
How to cite us:

If you would like to cite this database please use:
Toren D, Barzilay T, Tacutu R, Lehmann G, Muradian KK, Fraifeld VE. MitoAge: a database for comparative analysis of mitochondrial DNA, with a special focus on animal longevity. Nucleic Acids Res. 2016; 44(D1):D1262-5.