Viewing data for Ornithorhynchus anatinus


Scientific name Ornithorhynchus anatinus
Common name Duck-billed platypus
Maximum lifespan 22.60 years (Ornithorhynchus anatinus@AnAge)

Total mtDNA (size: 17019 bases) GC AT G C A T
Base content (bases) 6319 10700 4000 2319 5351 5349
Base content per 1 kb (bases) 371 629 235 136 314 314
Base content (%) 37.1% 62.9%
Total protein-coding genes (size: 11332 bases) GC AT G C A T
Base content (bases) 4309 7023 2913 1396 3628 3395
Base content per 1 kb (bases) 380 620 257 123 320 300
Base content (%) 38.0% 62.0%
D-loop: No data available for this section.
Total tRNA-coding genes (size: 1502 bases) GC AT G C A T
Base content (bases) 527 975 298 229 468 507
Base content per 1 kb (bases) 351 649 198 152 312 338
Base content (%) 35.1% 64.9%
Total rRNA-coding genes (size: 2505 bases) GC AT G C A T
Base content (bases) 948 1557 520 428 649 908
Base content per 1 kb (bases) 378 622 208 171 259 362
Base content (%) 37.8% 62.2%
12S rRNA gene (size: 943 bases) GC AT G C A T
Base content (bases) 377 566 209 168 222 344
Base content per 1 kb (bases) 400 600 222 178 235 365
Base content (%) 40.0% 60.0%
16S rRNA gene (size: 1562 bases) GC AT G C A T
Base content (bases) 571 991 311 260 427 564
Base content per 1 kb (bases) 366 634 199 166 273 361
Base content (%) 36.6% 63.4%

ATP6 (size: 681 bases) GC AT G C A T
Base content (bases) 251 430 175 76 227 203
Base content per 1 kb (bases) 369 631 257 112 333 298
Base content (%) 36.9% 63.1%
ATP8 (size: 210 bases) GC AT G C A T
Base content (bases) 68 142 49 19 71 71
Base content per 1 kb (bases) 324 676 233 90 338 338
Base content (%) 32.4% 67.6%
COX1 (size: 1542 bases) GC AT G C A T
Base content (bases) 596 946 344 252 539 407
Base content per 1 kb (bases) 387 613 223 163 350 264
Base content (%) 38.7% 61.3%
COX2 (size: 693 bases) GC AT G C A T
Base content (bases) 248 445 163 85 220 225
Base content per 1 kb (bases) 358 642 235 123 317 325
Base content (%) 35.8% 64.2%
COX3 (size: 784 bases) GC AT G C A T
Base content (bases) 314 470 200 114 258 212
Base content per 1 kb (bases) 401 599 255 145 329 270
Base content (%) 40.1% 59.9%
CYTB (size: 1140 bases) GC AT G C A T
Base content (bases) 472 668 315 157 359 309
Base content per 1 kb (bases) 414 586 276 138 315 271
Base content (%) 41.4% 58.6%
ND1 (size: 957 bases) GC AT G C A T
Base content (bases) 361 596 251 110 309 287
Base content per 1 kb (bases) 377 623 262 115 323 300
Base content (%) 37.7% 62.3%
ND2 (size: 1044 bases) GC AT G C A T
Base content (bases) 389 655 292 97 303 352
Base content per 1 kb (bases) 373 627 280 93 290 337
Base content (%) 37.3% 62.7%
ND3 (size: 348 bases) GC AT G C A T
Base content (bases) 123 225 76 47 123 102
Base content per 1 kb (bases) 353 647 218 135 353 293
Base content (%) 35.3% 64.7%
ND4 (size: 1378 bases) GC AT G C A T
Base content (bases) 518 860 356 162 455 405
Base content per 1 kb (bases) 376 624 258 118 330 294
Base content (%) 37.6% 62.4%
ND4L (size: 297 bases) GC AT G C A T
Base content (bases) 103 194 68 35 105 89
Base content per 1 kb (bases) 347 653 229 118 354 300
Base content (%) 34.7% 65.3%
ND5 (size: 1815 bases) GC AT G C A T
Base content (bases) 710 1105 501 209 566 539
Base content per 1 kb (bases) 391 609 276 115 312 297
Base content (%) 39.1% 60.9%
ND6 (size: 501 bases) GC AT G C A T
Base content (bases) 176 325 136 40 113 212
Base content per 1 kb (bases) 351 649 271 80 226 423
Base content (%) 35.1% 64.9%

ATP6 (size: 681 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 9 (3.98%)
Alanine (Ala, A)
n = 15 (6.64%)
Serine (Ser, S)
n = 13 (5.75%)
Threonine (Thr, T)
n = 25 (11.06%)
Cysteine (Cys, C)
n = 1 (0.44%)
Valine (Val, V)
n = 10 (4.42%)
Leucine (Leu, L)
n = 44 (19.47%)
Isoleucine (Ile, I)
n = 25 (11.06%)
Methionine (Met, M)
n = 14 (6.19%)
Proline (Pro, P)
n = 14 (6.19%)
Phenylalanine (Phe, F)
n = 13 (5.75%)
Tyrosine (Tyr, Y)
n = 3 (1.33%)
Tryptophan (Trp, W)
n = 4 (1.77%)
Aspartic acid (Asp, D)
n = 1 (0.44%)
Glutamic acid (Glu, E)
n = 3 (1.33%)
Asparagine (Asn, N)
n = 10 (4.42%)
Glutamine (Gln, Q)
n = 7 (3.1%)
Histidine (His, H)
n = 5 (2.21%)
Lysine (Lys, K)
n = 4 (1.77%)
Arginine (Arg, R)
n = 6 (2.65%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
17 8 9 10 3 17 4 9 7 0 4 1 4 1 9 4
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
5 1 0 6 5 3 1 2 2 4 1 6 4 4 0 9
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
5 11 0 0 3 7 0 1 2 2 1 0 1 6 4 4
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
1 3 0 1 0 2 2 1 2 3 0 0 0 1 0 4
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
38 66 81 42
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
23 64 34 106
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
15 45 88 79
ATP8 (size: 210 bases)
Amino acid sequence: MPQLDTSTWYTTILLMILAIFCIFQLKMIKHLYMNVPLILNQELFIKHQTPWHSKWTKIYLPPSLLLQS*
Amino acid frequencies:
Glycine (Gly, G)
n = 0 (0%)
Alanine (Ala, A)
n = 1 (1.45%)
Serine (Ser, S)
n = 4 (5.8%)
Threonine (Thr, T)
n = 6 (8.7%)
Cysteine (Cys, C)
n = 1 (1.45%)
Valine (Val, V)
n = 1 (1.45%)
Leucine (Leu, L)
n = 13 (18.84%)
Isoleucine (Ile, I)
n = 8 (11.59%)
Methionine (Met, M)
n = 4 (5.8%)
Proline (Pro, P)
n = 5 (7.25%)
Phenylalanine (Phe, F)
n = 3 (4.35%)
Tyrosine (Tyr, Y)
n = 3 (4.35%)
Tryptophan (Trp, W)
n = 3 (4.35%)
Aspartic acid (Asp, D)
n = 1 (1.45%)
Glutamic acid (Glu, E)
n = 1 (1.45%)
Asparagine (Asn, N)
n = 2 (2.9%)
Glutamine (Gln, Q)
n = 5 (7.25%)
Histidine (His, H)
n = 3 (4.35%)
Lysine (Lys, K)
n = 5 (7.25%)
Arginine (Arg, R)
n = 0 (0%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
7 1 3 0 2 3 1 4 3 2 0 0 0 1 1 2
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
1 1 0 1 0 0 0 0 0 0 0 3 1 1 0 0
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
3 2 1 1 2 1 0 0 0 2 1 0 3 2 0 2
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
1 1 0 0 1 4 1 0 0 0 0 0 0 0 1 3
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
4 19 25 22
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
4 16 21 29
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
11 14 25 20
COX1 (size: 1542 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 47 (9.16%)
Alanine (Ala, A)
n = 41 (7.99%)
Serine (Ser, S)
n = 31 (6.04%)
Threonine (Thr, T)
n = 36 (7.02%)
Cysteine (Cys, C)
n = 1 (0.19%)
Valine (Val, V)
n = 38 (7.41%)
Leucine (Leu, L)
n = 63 (12.28%)
Isoleucine (Ile, I)
n = 39 (7.6%)
Methionine (Met, M)
n = 28 (5.46%)
Proline (Pro, P)
n = 30 (5.85%)
Phenylalanine (Phe, F)
n = 42 (8.19%)
Tyrosine (Tyr, Y)
n = 18 (3.51%)
Tryptophan (Trp, W)
n = 17 (3.31%)
Aspartic acid (Asp, D)
n = 15 (2.92%)
Glutamic acid (Glu, E)
n = 9 (1.75%)
Asparagine (Asn, N)
n = 15 (2.92%)
Glutamine (Gln, Q)
n = 7 (1.36%)
Histidine (His, H)
n = 19 (3.7%)
Lysine (Lys, K)
n = 9 (1.75%)
Arginine (Arg, R)
n = 8 (1.56%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
28 11 23 12 6 17 2 22 6 1 17 7 13 1 31 11
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
5 1 0 12 16 13 0 20 8 12 7 14 8 8 0 10
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
5 20 1 11 3 13 1 1 2 9 9 1 4 9 6 9
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
10 7 2 11 4 8 1 1 2 5 0 0 0 1 0 16
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
150 101 130 133
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
76 135 93 210
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
26 108 184 196
COX2 (size: 693 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 8 (3.48%)
Alanine (Ala, A)
n = 8 (3.48%)
Serine (Ser, S)
n = 21 (9.13%)
Threonine (Thr, T)
n = 19 (8.26%)
Cysteine (Cys, C)
n = 2 (0.87%)
Valine (Val, V)
n = 8 (3.48%)
Leucine (Leu, L)
n = 35 (15.22%)
Isoleucine (Ile, I)
n = 22 (9.57%)
Methionine (Met, M)
n = 14 (6.09%)
Proline (Pro, P)
n = 14 (6.09%)
Phenylalanine (Phe, F)
n = 7 (3.04%)
Tyrosine (Tyr, Y)
n = 10 (4.35%)
Tryptophan (Trp, W)
n = 5 (2.17%)
Aspartic acid (Asp, D)
n = 11 (4.78%)
Glutamic acid (Glu, E)
n = 13 (5.65%)
Asparagine (Asn, N)
n = 8 (3.48%)
Glutamine (Gln, Q)
n = 8 (3.48%)
Histidine (His, H)
n = 8 (3.48%)
Lysine (Lys, K)
n = 4 (1.74%)
Arginine (Arg, R)
n = 5 (2.17%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
16 6 8 8 5 9 0 13 7 1 4 2 2 0 4 3
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
6 1 1 3 4 1 0 2 1 5 0 3 4 7 0 7
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
4 7 1 2 3 10 2 1 3 9 1 0 0 6 2 5
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
3 11 2 8 3 4 0 0 3 1 1 0 0 1 0 5
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
48 57 71 55
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
24 58 63 86
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
13 48 91 79
COX3 (size: 784 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 21 (8.08%)
Alanine (Ala, A)
n = 16 (6.15%)
Serine (Ser, S)
n = 20 (7.69%)
Threonine (Thr, T)
n = 23 (8.85%)
Cysteine (Cys, C)
n = 2 (0.77%)
Valine (Val, V)
n = 14 (5.38%)
Leucine (Leu, L)
n = 35 (13.46%)
Isoleucine (Ile, I)
n = 17 (6.54%)
Methionine (Met, M)
n = 8 (3.08%)
Proline (Pro, P)
n = 10 (3.85%)
Phenylalanine (Phe, F)
n = 20 (7.69%)
Tyrosine (Tyr, Y)
n = 14 (5.38%)
Tryptophan (Trp, W)
n = 12 (4.62%)
Aspartic acid (Asp, D)
n = 3 (1.15%)
Glutamic acid (Glu, E)
n = 8 (3.08%)
Asparagine (Asn, N)
n = 7 (2.69%)
Glutamine (Gln, Q)
n = 8 (3.08%)
Histidine (His, H)
n = 15 (5.77%)
Lysine (Lys, K)
n = 3 (1.15%)
Arginine (Arg, R)
n = 5 (1.92%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
12 5 6 8 4 14 0 8 8 0 5 5 3 1 10 10
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
2 1 1 7 6 3 0 6 8 7 0 2 4 4 0 8
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
7 7 1 5 2 8 1 2 2 10 4 0 1 5 2 6
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
9 6 2 2 1 3 0 1 1 3 0 0 0 0 0 12
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
62 64 62 73
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
44 65 58 94
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
8 71 92 90
CYTB (size: 1140 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 26 (6.86%)
Alanine (Ala, A)
n = 21 (5.54%)
Serine (Ser, S)
n = 23 (6.07%)
Threonine (Thr, T)
n = 31 (8.18%)
Cysteine (Cys, C)
n = 3 (0.79%)
Valine (Val, V)
n = 22 (5.8%)
Leucine (Leu, L)
n = 63 (16.62%)
Isoleucine (Ile, I)
n = 35 (9.23%)
Methionine (Met, M)
n = 8 (2.11%)
Proline (Pro, P)
n = 23 (6.07%)
Phenylalanine (Phe, F)
n = 27 (7.12%)
Tyrosine (Tyr, Y)
n = 15 (3.96%)
Tryptophan (Trp, W)
n = 12 (3.17%)
Aspartic acid (Asp, D)
n = 12 (3.17%)
Glutamic acid (Glu, E)
n = 6 (1.58%)
Asparagine (Asn, N)
n = 16 (4.22%)
Glutamine (Gln, Q)
n = 8 (2.11%)
Histidine (His, H)
n = 12 (3.17%)
Lysine (Lys, K)
n = 8 (2.11%)
Arginine (Arg, R)
n = 8 (2.11%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
20 15 6 14 13 19 2 13 6 2 4 9 9 0 9 18
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
2 1 2 7 8 5 1 6 5 12 3 5 6 10 2 8
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
8 14 1 6 4 10 2 1 0 6 9 0 2 8 8 6
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
6 5 1 7 5 8 0 1 3 3 1 0 0 0 1 12
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
87 99 99 95
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
50 97 78 155
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
20 119 132 109
ND1 (size: 957 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 14 (4.4%)
Alanine (Ala, A)
n = 23 (7.23%)
Serine (Ser, S)
n = 20 (6.29%)
Threonine (Thr, T)
n = 26 (8.18%)
Cysteine (Cys, C)
n = 1 (0.31%)
Valine (Val, V)
n = 15 (4.72%)
Leucine (Leu, L)
n = 63 (19.81%)
Isoleucine (Ile, I)
n = 29 (9.12%)
Methionine (Met, M)
n = 16 (5.03%)
Proline (Pro, P)
n = 20 (6.29%)
Phenylalanine (Phe, F)
n = 20 (6.29%)
Tyrosine (Tyr, Y)
n = 12 (3.77%)
Tryptophan (Trp, W)
n = 9 (2.83%)
Aspartic acid (Asp, D)
n = 4 (1.26%)
Glutamic acid (Glu, E)
n = 11 (3.46%)
Asparagine (Asn, N)
n = 11 (3.46%)
Glutamine (Gln, Q)
n = 6 (1.89%)
Histidine (His, H)
n = 3 (0.94%)
Lysine (Lys, K)
n = 7 (2.2%)
Arginine (Arg, R)
n = 8 (2.52%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
18 11 15 12 12 21 1 15 6 0 3 2 8 2 10 10
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
1 1 0 8 8 7 0 1 3 9 1 5 5 10 0 4
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
10 12 0 6 4 8 2 0 0 8 4 0 2 5 6 1
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
2 9 2 4 0 7 0 0 2 6 0 0 0 1 0 9
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
67 83 89 80
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
32 89 55 143
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
11 79 143 86
ND2 (size: 1044 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 14 (4.03%)
Alanine (Ala, A)
n = 20 (5.76%)
Serine (Ser, S)
n = 29 (8.36%)
Threonine (Thr, T)
n = 47 (13.54%)
Cysteine (Cys, C)
n = 0 (0%)
Valine (Val, V)
n = 10 (2.88%)
Leucine (Leu, L)
n = 65 (18.73%)
Isoleucine (Ile, I)
n = 33 (9.51%)
Methionine (Met, M)
n = 23 (6.63%)
Proline (Pro, P)
n = 18 (5.19%)
Phenylalanine (Phe, F)
n = 14 (4.03%)
Tyrosine (Tyr, Y)
n = 10 (2.88%)
Tryptophan (Trp, W)
n = 11 (3.17%)
Aspartic acid (Asp, D)
n = 3 (0.86%)
Glutamic acid (Glu, E)
n = 4 (1.15%)
Asparagine (Asn, N)
n = 15 (4.32%)
Glutamine (Gln, Q)
n = 8 (2.31%)
Histidine (His, H)
n = 8 (2.31%)
Lysine (Lys, K)
n = 12 (3.46%)
Arginine (Arg, R)
n = 3 (0.86%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
19 14 20 15 11 19 2 15 8 0 2 4 4 0 4 10
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
3 0 0 3 8 9 0 2 3 9 0 5 5 8 0 12
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
14 19 2 1 6 16 1 1 4 5 5 1 3 7 8 3
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
5 4 0 1 2 11 1 0 0 3 0 0 0 1 0 10
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
51 84 135 78
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
33 109 61 145
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
13 99 156 80
ND3 (size: 1044 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 14 (4.03%)
Alanine (Ala, A)
n = 20 (5.76%)
Serine (Ser, S)
n = 29 (8.36%)
Threonine (Thr, T)
n = 47 (13.54%)
Cysteine (Cys, C)
n = 0 (0%)
Valine (Val, V)
n = 10 (2.88%)
Leucine (Leu, L)
n = 65 (18.73%)
Isoleucine (Ile, I)
n = 33 (9.51%)
Methionine (Met, M)
n = 23 (6.63%)
Proline (Pro, P)
n = 18 (5.19%)
Phenylalanine (Phe, F)
n = 14 (4.03%)
Tyrosine (Tyr, Y)
n = 10 (2.88%)
Tryptophan (Trp, W)
n = 11 (3.17%)
Aspartic acid (Asp, D)
n = 3 (0.86%)
Glutamic acid (Glu, E)
n = 4 (1.15%)
Asparagine (Asn, N)
n = 15 (4.32%)
Glutamine (Gln, Q)
n = 8 (2.31%)
Histidine (His, H)
n = 8 (2.31%)
Lysine (Lys, K)
n = 12 (3.46%)
Arginine (Arg, R)
n = 3 (0.86%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
19 14 20 15 11 19 2 15 8 0 2 4 4 0 4 10
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
3 0 0 3 8 9 0 2 3 9 0 5 5 8 0 12
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
14 19 2 1 6 16 1 1 4 5 5 1 3 7 8 3
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
5 4 0 1 2 11 1 0 0 3 0 0 0 1 0 10
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
51 84 135 78
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
33 109 61 145
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
13 99 156 80
ND4 (size: 1378 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 21 (4.59%)
Alanine (Ala, A)
n = 28 (6.11%)
Serine (Ser, S)
n = 41 (8.95%)
Threonine (Thr, T)
n = 31 (6.77%)
Cysteine (Cys, C)
n = 4 (0.87%)
Valine (Val, V)
n = 16 (3.49%)
Leucine (Leu, L)
n = 96 (20.96%)
Isoleucine (Ile, I)
n = 47 (10.26%)
Methionine (Met, M)
n = 31 (6.77%)
Proline (Pro, P)
n = 21 (4.59%)
Phenylalanine (Phe, F)
n = 19 (4.15%)
Tyrosine (Tyr, Y)
n = 15 (3.28%)
Tryptophan (Trp, W)
n = 12 (2.62%)
Aspartic acid (Asp, D)
n = 5 (1.09%)
Glutamic acid (Glu, E)
n = 10 (2.18%)
Asparagine (Asn, N)
n = 17 (3.71%)
Glutamine (Gln, Q)
n = 11 (2.4%)
Histidine (His, H)
n = 12 (2.62%)
Lysine (Lys, K)
n = 12 (2.62%)
Arginine (Arg, R)
n = 10 (2.18%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
30 17 27 14 15 31 7 26 10 1 5 3 6 2 15 4
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
4 2 2 13 11 4 0 2 5 11 3 4 12 5 0 11
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
8 11 1 11 12 8 0 3 7 9 6 1 3 8 9 4
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
8 9 1 1 4 11 1 3 1 5 1 0 0 0 0 11
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
80 121 148 110
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
57 111 82 209
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
25 124 175 135
ND4L (size: 297 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 5 (5.1%)
Alanine (Ala, A)
n = 6 (6.12%)
Serine (Ser, S)
n = 6 (6.12%)
Threonine (Thr, T)
n = 7 (7.14%)
Cysteine (Cys, C)
n = 3 (3.06%)
Valine (Val, V)
n = 7 (7.14%)
Leucine (Leu, L)
n = 24 (24.49%)
Isoleucine (Ile, I)
n = 6 (6.12%)
Methionine (Met, M)
n = 8 (8.16%)
Proline (Pro, P)
n = 1 (1.02%)
Phenylalanine (Phe, F)
n = 5 (5.1%)
Tyrosine (Tyr, Y)
n = 2 (2.04%)
Tryptophan (Trp, W)
n = 0 (0%)
Aspartic acid (Asp, D)
n = 1 (1.02%)
Glutamic acid (Glu, E)
n = 3 (3.06%)
Asparagine (Asn, N)
n = 6 (6.12%)
Glutamine (Gln, Q)
n = 1 (1.02%)
Histidine (His, H)
n = 5 (5.1%)
Lysine (Lys, K)
n = 1 (1.02%)
Arginine (Arg, R)
n = 1 (1.02%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
6 0 8 6 4 7 0 6 1 0 3 0 2 2 2 3
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
0 2 1 1 1 4 0 1 2 1 1 1 0 0 0 2
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
2 3 0 1 2 3 0 0 0 1 1 0 1 3 3 2
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
3 3 0 0 1 1 0 0 0 1 0 0 0 1 0 0
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
22 25 28 24
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
9 20 20 50
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
4 23 41 31
ND5 (size: 1815 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 30 (4.97%)
Alanine (Ala, A)
n = 43 (7.12%)
Serine (Ser, S)
n = 45 (7.45%)
Threonine (Thr, T)
n = 57 (9.44%)
Cysteine (Cys, C)
n = 5 (0.83%)
Valine (Val, V)
n = 16 (2.65%)
Leucine (Leu, L)
n = 104 (17.22%)
Isoleucine (Ile, I)
n = 62 (10.26%)
Methionine (Met, M)
n = 26 (4.3%)
Proline (Pro, P)
n = 29 (4.8%)
Phenylalanine (Phe, F)
n = 46 (7.62%)
Tyrosine (Tyr, Y)
n = 13 (2.15%)
Tryptophan (Trp, W)
n = 13 (2.15%)
Aspartic acid (Asp, D)
n = 9 (1.49%)
Glutamic acid (Glu, E)
n = 13 (2.15%)
Asparagine (Asn, N)
n = 33 (5.46%)
Glutamine (Gln, Q)
n = 18 (2.98%)
Histidine (His, H)
n = 15 (2.48%)
Lysine (Lys, K)
n = 19 (3.15%)
Arginine (Arg, R)
n = 8 (1.32%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
40 22 21 17 21 31 4 28 15 3 6 4 4 2 23 23
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
5 2 3 10 18 14 1 6 8 13 3 7 9 12 1 16
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
20 19 2 10 12 15 0 3 5 5 8 1 3 10 23 4
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
11 9 4 5 4 16 3 2 1 4 1 0 0 0 1 12
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
111 143 205 146
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
64 166 121 254
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
34 192 213 166
ND6 (size: 501 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 25 (15.06%)
Alanine (Ala, A)
n = 6 (3.61%)
Serine (Ser, S)
n = 13 (7.83%)
Threonine (Thr, T)
n = 7 (4.22%)
Cysteine (Cys, C)
n = 2 (1.2%)
Valine (Val, V)
n = 21 (12.65%)
Leucine (Leu, L)
n = 28 (16.87%)
Isoleucine (Ile, I)
n = 10 (6.02%)
Methionine (Met, M)
n = 7 (4.22%)
Proline (Pro, P)
n = 3 (1.81%)
Phenylalanine (Phe, F)
n = 11 (6.63%)
Tyrosine (Tyr, Y)
n = 10 (6.02%)
Tryptophan (Trp, W)
n = 4 (2.41%)
Aspartic acid (Asp, D)
n = 5 (3.01%)
Glutamic acid (Glu, E)
n = 8 (4.82%)
Asparagine (Asn, N)
n = 3 (1.81%)
Glutamine (Gln, Q)
n = 0 (0%)
Histidine (His, H)
n = 1 (0.6%)
Lysine (Lys, K)
n = 1 (0.6%)
Arginine (Arg, R)
n = 1 (0.6%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
9 1 4 3 0 2 1 16 0 0 10 1 6 4 10 1
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
3 2 0 5 0 1 0 6 0 7 12 2 0 0 1 3
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
0 3 1 4 1 2 0 6 0 9 1 1 6 3 0 0
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
1 4 4 5 0 1 0 1 0 0 0 0 0 1 0 3
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
65 11 34 57
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
38 23 29 77
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
33 6 50 78
Total protein-coding genes (size: 11390 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 226 (5.96%)
Alanine (Ala, A)
n = 237 (6.25%)
Serine (Ser, S)
n = 276 (7.27%)
Threonine (Thr, T)
n = 322 (8.48%)
Cysteine (Cys, C)
n = 26 (0.69%)
Valine (Val, V)
n = 183 (4.82%)
Leucine (Leu, L)
n = 660 (17.39%)
Isoleucine (Ile, I)
n = 341 (8.99%)
Methionine (Met, M)
n = 189 (4.98%)
Proline (Pro, P)
n = 195 (5.14%)
Phenylalanine (Phe, F)
n = 234 (6.17%)
Tyrosine (Tyr, Y)
n = 130 (3.43%)
Tryptophan (Trp, W)
n = 106 (2.79%)
Aspartic acid (Asp, D)
n = 72 (1.9%)
Glutamic acid (Glu, E)
n = 95 (2.5%)
Asparagine (Asn, N)
n = 145 (3.82%)
Glutamine (Gln, Q)
n = 90 (2.37%)
Histidine (His, H)
n = 106 (2.79%)
Lysine (Lys, K)
n = 88 (2.32%)
Arginine (Arg, R)
n = 64 (1.69%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
229 112 151 122 99 200 24 186 80 10 64 39 63 17 133 101
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
38 16 10 80 87 67 3 57 45 93 31 60 60 71 4 94
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
87 130 11 58 55 108 9 21 25 78 52 5 29 72 73 46
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
60 76 19 46 26 79 9 11 15 34 4 0 1 7 3 101
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
813 900 1132 951
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
469 984 736 1607
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
217 946 1446 1187 

Error: F​a​i​l​e​d​ t​o​ u​n​d​e​r​s​t​a​n​d​ i​d​:​ ?​t​e​r​m​=​(​"​O​r​n​i​t​h​o​r​h​y​n​c​h​u​s​
F​a​i​l​e​d​ t​o​ u​n​d​e​r​s​t​a​n​d​ i​d​:​ a​n​a​t​i​n​u​s​"​[​O​r​g​a​n​i​s​m​]​)​
F​a​i​l​e​d​ t​o​ u​n​d​e​r​s​t​a​n​d​ i​d​:​ A​N​D​
F​a​i​l​e​d​ t​o​ u​n​d​e​r​s​t​a​n​d​ i​d​:​ (​r​e​f​s​e​q​[​f​i​l​t​e​r​]​
F​a​i​l​e​d​ t​o​ u​n​d​e​r​s​t​a​n​d​ i​d​:​ A​N​D​
F​a​i​l​e​d​ t​o​ u​n​d​e​r​s​t​a​n​d​ i​d​:​ m​i​t​o​c​h​o​n​d​r​i​o​n​[​f​i​l​t​e​r​]​)​
Contact: Vadim E. Fraifeld, MD, PhD

Head: Lab for the Biology of Aging, The Shraga Segal Department of Microbiology, Immunology and Genetics, Faculty of Health Sciences, Ben-Gurion University of the Negev
P.O. Box 653, Beer-Sheva 8410501, Israel

Email:
How to cite us:

If you would like to cite this database please use:
Toren D, Barzilay T, Tacutu R, Lehmann G, Muradian KK, Fraifeld VE. MitoAge: a database for comparative analysis of mitochondrial DNA, with a special focus on animal longevity. Nucleic Acids Res. 2016; 44(D1):D1262-5.