Viewing data for Rusa alfredi


Scientific name Rusa alfredi
Common name Visayan spotted deer
Maximum lifespan 18.50 years (Rusa alfredi@AnAge)

Total mtDNA (size: 16355 bases) GC AT G C A T
Base content (bases) 6160 10195 4006 2154 4702 5493
Base content per 1 kb (bases) 377 623 245 132 287 336
Base content (%) 37.7% 62.3%
Total protein-coding genes (size: 11338 bases) GC AT G C A T
Base content (bases) 4290 7048 2946 1344 3357 3691
Base content per 1 kb (bases) 378 622 260 119 296 326
Base content (%) 37.8% 62.2%
D-loop: No data available for this section.
Total tRNA-coding genes (size: 1516 bases) GC AT G C A T
Base content (bases) 536 980 307 229 431 549
Base content per 1 kb (bases) 354 646 203 151 284 362
Base content (%) 35.4% 64.6%
Total rRNA-coding genes (size: 2531 bases) GC AT G C A T
Base content (bases) 965 1566 531 434 610 956
Base content per 1 kb (bases) 381 619 210 171 241 378
Base content (%) 38.1% 61.9%
12S rRNA gene (size: 956 bases) GC AT G C A T
Base content (bases) 386 570 218 168 217 353
Base content per 1 kb (bases) 404 596 228 176 227 369
Base content (%) 40.4% 59.6%
16S rRNA gene (size: 1575 bases) GC AT G C A T
Base content (bases) 579 996 313 266 393 603
Base content per 1 kb (bases) 368 632 199 169 250 383
Base content (%) 36.8% 63.2%

ATP6 (size: 681 bases) GC AT G C A T
Base content (bases) 253 428 178 75 212 216
Base content per 1 kb (bases) 372 628 261 110 311 317
Base content (%) 37.2% 62.8%
ATP8 (size: 201 bases) GC AT G C A T
Base content (bases) 52 149 42 10 64 85
Base content per 1 kb (bases) 259 741 209 50 318 423
Base content (%) 25.9% 74.1%
COX1 (size: 1545 bases) GC AT G C A T
Base content (bases) 595 950 349 246 500 450
Base content per 1 kb (bases) 385 615 226 159 324 291
Base content (%) 38.5% 61.5%
COX2 (size: 684 bases) GC AT G C A T
Base content (bases) 254 430 159 95 191 239
Base content per 1 kb (bases) 371 629 232 139 279 349
Base content (%) 37.1% 62.9%
COX3 (size: 784 bases) GC AT G C A T
Base content (bases) 334 450 223 111 233 217
Base content per 1 kb (bases) 426 574 284 142 297 277
Base content (%) 42.6% 57.4%
CYTB (size: 1140 bases) GC AT G C A T
Base content (bases) 464 676 317 147 320 356
Base content per 1 kb (bases) 407 593 278 129 281 312
Base content (%) 40.7% 59.3%
ND1 (size: 956 bases) GC AT G C A T
Base content (bases) 362 594 247 115 292 302
Base content per 1 kb (bases) 379 621 258 120 305 316
Base content (%) 37.9% 62.1%
ND2 (size: 1042 bases) GC AT G C A T
Base content (bases) 359 683 271 88 296 387
Base content per 1 kb (bases) 345 655 260 84 284 371
Base content (%) 34.5% 65.5%
ND3 (size: 346 bases) GC AT G C A T
Base content (bases) 133 213 88 45 110 103
Base content per 1 kb (bases) 384 616 254 130 318 298
Base content (%) 38.4% 61.6%
ND4 (size: 1378 bases) GC AT G C A T
Base content (bases) 515 863 369 146 421 442
Base content per 1 kb (bases) 374 626 268 106 306 321
Base content (%) 37.4% 62.6%
ND4L (size: 297 bases) GC AT G C A T
Base content (bases) 111 186 74 37 92 94
Base content per 1 kb (bases) 374 626 249 125 310 316
Base content (%) 37.4% 62.6%
ND5 (size: 1821 bases) GC AT G C A T
Base content (bases) 681 1140 487 194 531 609
Base content per 1 kb (bases) 374 626 267 107 292 334
Base content (%) 37.4% 62.6%
ND6 (size: 528 bases) GC AT G C A T
Base content (bases) 195 333 155 40 117 216
Base content per 1 kb (bases) 369 631 294 76 222 409
Base content (%) 36.9% 63.1%

ATP6 (size: 681 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 12 (5.31%)
Alanine (Ala, A)
n = 16 (7.08%)
Serine (Ser, S)
n = 14 (6.19%)
Threonine (Thr, T)
n = 25 (11.06%)
Cysteine (Cys, C)
n = 0 (0%)
Valine (Val, V)
n = 10 (4.42%)
Leucine (Leu, L)
n = 44 (19.47%)
Isoleucine (Ile, I)
n = 25 (11.06%)
Methionine (Met, M)
n = 13 (5.75%)
Proline (Pro, P)
n = 12 (5.31%)
Phenylalanine (Phe, F)
n = 12 (5.31%)
Tyrosine (Tyr, Y)
n = 2 (0.88%)
Tryptophan (Trp, W)
n = 3 (1.33%)
Aspartic acid (Asp, D)
n = 1 (0.44%)
Glutamic acid (Glu, E)
n = 3 (1.33%)
Asparagine (Asn, N)
n = 11 (4.87%)
Glutamine (Gln, Q)
n = 8 (3.54%)
Histidine (His, H)
n = 7 (3.1%)
Lysine (Lys, K)
n = 4 (1.77%)
Arginine (Arg, R)
n = 4 (1.77%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
18 7 12 13 4 16 2 8 8 0 2 2 6 0 10 2
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
1 0 0 4 7 5 0 1 3 6 2 1 3 8 0 6
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
6 13 0 2 2 5 0 3 2 0 2 1 1 8 3 2
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
5 2 1 0 1 3 1 2 1 1 0 0 0 1 0 2
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
42 66 83 36
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
24 62 37 104
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
9 50 96 72
ATP8 (size: 201 bases)
Amino acid sequence: MPQLDTSTWLMMIMSMFLALFIIFQLKISKYNFHFNPELMSTKTQKQNIPWEMKWTKIYLPLLLPQ*
Amino acid frequencies:
Glycine (Gly, G)
n = 0 (0%)
Alanine (Ala, A)
n = 1 (1.52%)
Serine (Ser, S)
n = 4 (6.06%)
Threonine (Thr, T)
n = 5 (7.58%)
Cysteine (Cys, C)
n = 0 (0%)
Valine (Val, V)
n = 0 (0%)
Leucine (Leu, L)
n = 10 (15.15%)
Isoleucine (Ile, I)
n = 6 (9.09%)
Methionine (Met, M)
n = 7 (10.61%)
Proline (Pro, P)
n = 5 (7.58%)
Phenylalanine (Phe, F)
n = 5 (7.58%)
Tyrosine (Tyr, Y)
n = 2 (3.03%)
Tryptophan (Trp, W)
n = 3 (4.55%)
Aspartic acid (Asp, D)
n = 1 (1.52%)
Glutamic acid (Glu, E)
n = 2 (3.03%)
Asparagine (Asn, N)
n = 3 (4.55%)
Glutamine (Gln, Q)
n = 5 (7.58%)
Histidine (His, H)
n = 1 (1.52%)
Lysine (Lys, K)
n = 6 (9.09%)
Arginine (Arg, R)
n = 0 (0%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
4 2 6 2 1 3 0 4 5 0 0 0 0 0 3 2
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
1 0 0 1 0 0 0 0 0 0 0 2 1 2 0 0
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
1 2 2 0 1 3 0 0 0 1 1 0 0 3 0 1
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
0 2 0 0 1 6 0 0 0 0 0 0 0 1 0 3
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
4 17 27 19
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
3 15 21 28
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
3 10 37 17
COX1 (size: 1545 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 47 (9.14%)
Alanine (Ala, A)
n = 38 (7.39%)
Serine (Ser, S)
n = 31 (6.03%)
Threonine (Thr, T)
n = 39 (7.59%)
Cysteine (Cys, C)
n = 1 (0.19%)
Valine (Val, V)
n = 38 (7.39%)
Leucine (Leu, L)
n = 59 (11.48%)
Isoleucine (Ile, I)
n = 38 (7.39%)
Methionine (Met, M)
n = 33 (6.42%)
Proline (Pro, P)
n = 28 (5.45%)
Phenylalanine (Phe, F)
n = 42 (8.17%)
Tyrosine (Tyr, Y)
n = 19 (3.7%)
Tryptophan (Trp, W)
n = 17 (3.31%)
Aspartic acid (Asp, D)
n = 15 (2.92%)
Glutamic acid (Glu, E)
n = 10 (1.95%)
Asparagine (Asn, N)
n = 19 (3.7%)
Glutamine (Gln, Q)
n = 6 (1.17%)
Histidine (His, H)
n = 17 (3.31%)
Lysine (Lys, K)
n = 9 (1.75%)
Arginine (Arg, R)
n = 8 (1.56%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
26 12 28 8 6 16 6 22 6 0 9 9 19 1 26 16
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
5 0 1 14 9 14 1 10 12 20 5 12 5 11 0 9
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
7 22 1 8 5 15 0 1 2 11 8 2 1 11 8 7
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
10 10 0 6 9 9 0 1 2 5 0 0 0 1 0 15
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
148 95 141 131
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
76 133 96 210
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
22 121 213 159
COX2 (size: 684 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 8 (3.52%)
Alanine (Ala, A)
n = 8 (3.52%)
Serine (Ser, S)
n = 20 (8.81%)
Threonine (Thr, T)
n = 17 (7.49%)
Cysteine (Cys, C)
n = 2 (0.88%)
Valine (Val, V)
n = 13 (5.73%)
Leucine (Leu, L)
n = 34 (14.98%)
Isoleucine (Ile, I)
n = 17 (7.49%)
Methionine (Met, M)
n = 17 (7.49%)
Proline (Pro, P)
n = 13 (5.73%)
Phenylalanine (Phe, F)
n = 7 (3.08%)
Tyrosine (Tyr, Y)
n = 11 (4.85%)
Tryptophan (Trp, W)
n = 5 (2.2%)
Aspartic acid (Asp, D)
n = 10 (4.41%)
Glutamic acid (Glu, E)
n = 15 (6.61%)
Asparagine (Asn, N)
n = 6 (2.64%)
Glutamine (Gln, Q)
n = 6 (2.64%)
Histidine (His, H)
n = 7 (3.08%)
Lysine (Lys, K)
n = 5 (2.2%)
Arginine (Arg, R)
n = 6 (2.64%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
10 7 14 2 3 19 2 6 5 1 3 4 6 0 3 4
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
3 0 2 4 1 3 0 1 2 5 0 2 2 8 1 4
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
0 10 3 5 3 5 2 1 4 9 2 0 2 2 4 4
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
3 14 1 4 6 5 0 0 1 5 0 0 0 1 0 5
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
54 58 67 49
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
26 53 61 88
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
15 48 111 54
COX3 (size: 784 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 20 (7.69%)
Alanine (Ala, A)
n = 15 (5.77%)
Serine (Ser, S)
n = 20 (7.69%)
Threonine (Thr, T)
n = 23 (8.85%)
Cysteine (Cys, C)
n = 2 (0.77%)
Valine (Val, V)
n = 15 (5.77%)
Leucine (Leu, L)
n = 32 (12.31%)
Isoleucine (Ile, I)
n = 16 (6.15%)
Methionine (Met, M)
n = 10 (3.85%)
Proline (Pro, P)
n = 12 (4.62%)
Phenylalanine (Phe, F)
n = 24 (9.23%)
Tyrosine (Tyr, Y)
n = 11 (4.23%)
Tryptophan (Trp, W)
n = 12 (4.62%)
Aspartic acid (Asp, D)
n = 3 (1.15%)
Glutamic acid (Glu, E)
n = 8 (3.08%)
Asparagine (Asn, N)
n = 7 (2.69%)
Glutamine (Gln, Q)
n = 7 (2.69%)
Histidine (His, H)
n = 17 (6.54%)
Lysine (Lys, K)
n = 2 (0.77%)
Arginine (Arg, R)
n = 5 (1.92%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
11 5 9 4 5 14 2 7 7 0 4 6 5 0 10 14
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
1 0 2 4 8 3 0 0 10 8 2 2 4 6 0 8
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
5 10 0 4 4 7 0 2 3 7 4 0 0 1 6 6
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
11 7 1 1 2 2 0 0 3 2 0 0 0 0 0 12
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
61 66 63 71
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
44 65 55 97
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
6 92 99 64
CYTB (size: 1140 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 24 (6.33%)
Alanine (Ala, A)
n = 23 (6.07%)
Serine (Ser, S)
n = 24 (6.33%)
Threonine (Thr, T)
n = 28 (7.39%)
Cysteine (Cys, C)
n = 4 (1.06%)
Valine (Val, V)
n = 17 (4.49%)
Leucine (Leu, L)
n = 58 (15.3%)
Isoleucine (Ile, I)
n = 41 (10.82%)
Methionine (Met, M)
n = 14 (3.69%)
Proline (Pro, P)
n = 23 (6.07%)
Phenylalanine (Phe, F)
n = 27 (7.12%)
Tyrosine (Tyr, Y)
n = 14 (3.69%)
Tryptophan (Trp, W)
n = 12 (3.17%)
Aspartic acid (Asp, D)
n = 11 (2.9%)
Glutamic acid (Glu, E)
n = 6 (1.58%)
Asparagine (Asn, N)
n = 18 (4.75%)
Glutamine (Gln, Q)
n = 6 (1.58%)
Histidine (His, H)
n = 12 (3.17%)
Lysine (Lys, K)
n = 9 (2.37%)
Arginine (Arg, R)
n = 8 (2.11%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
16 25 12 9 11 24 4 10 6 0 2 6 8 1 13 14
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
2 1 3 2 3 18 0 1 6 15 2 4 4 15 0 3
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
7 18 0 3 8 10 0 1 2 7 7 1 0 5 13 4
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
8 4 2 4 7 8 1 0 1 6 1 1 0 0 0 11
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
81 97 114 88
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
52 95 76 157
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
14 125 166 75
ND1 (size: 956 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 12 (3.79%)
Alanine (Ala, A)
n = 28 (8.83%)
Serine (Ser, S)
n = 23 (7.26%)
Threonine (Thr, T)
n = 18 (5.68%)
Cysteine (Cys, C)
n = 1 (0.32%)
Valine (Val, V)
n = 15 (4.73%)
Leucine (Leu, L)
n = 53 (16.72%)
Isoleucine (Ile, I)
n = 33 (10.41%)
Methionine (Met, M)
n = 19 (5.99%)
Proline (Pro, P)
n = 22 (6.94%)
Phenylalanine (Phe, F)
n = 22 (6.94%)
Tyrosine (Tyr, Y)
n = 11 (3.47%)
Tryptophan (Trp, W)
n = 9 (2.84%)
Aspartic acid (Asp, D)
n = 3 (0.95%)
Glutamic acid (Glu, E)
n = 11 (3.47%)
Asparagine (Asn, N)
n = 13 (4.1%)
Glutamine (Gln, Q)
n = 7 (2.21%)
Histidine (His, H)
n = 3 (0.95%)
Lysine (Lys, K)
n = 7 (2.21%)
Arginine (Arg, R)
n = 8 (2.52%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
20 13 16 4 7 30 2 10 7 0 4 2 7 2 16 6
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
3 1 0 1 11 16 0 2 4 5 1 4 9 9 0 1
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
2 15 0 5 6 7 2 0 3 10 1 0 0 6 7 1
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
2 10 1 1 2 7 0 0 1 5 2 0 0 0 0 9
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
69 83 93 73
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
33 88 55 142
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
13 76 153 76
ND2 (size: 1042 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 14 (4.05%)
Alanine (Ala, A)
n = 17 (4.91%)
Serine (Ser, S)
n = 27 (7.8%)
Threonine (Thr, T)
n = 40 (11.56%)
Cysteine (Cys, C)
n = 0 (0%)
Valine (Val, V)
n = 11 (3.18%)
Leucine (Leu, L)
n = 53 (15.32%)
Isoleucine (Ile, I)
n = 37 (10.69%)
Methionine (Met, M)
n = 44 (12.72%)
Proline (Pro, P)
n = 19 (5.49%)
Phenylalanine (Phe, F)
n = 14 (4.05%)
Tyrosine (Tyr, Y)
n = 8 (2.31%)
Tryptophan (Trp, W)
n = 10 (2.89%)
Aspartic acid (Asp, D)
n = 1 (0.29%)
Glutamic acid (Glu, E)
n = 5 (1.45%)
Asparagine (Asn, N)
n = 16 (4.62%)
Glutamine (Gln, Q)
n = 10 (2.89%)
Histidine (His, H)
n = 5 (1.45%)
Lysine (Lys, K)
n = 13 (3.76%)
Arginine (Arg, R)
n = 3 (0.87%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
20 17 41 5 10 23 1 13 10 0 4 4 3 0 8 6
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
3 0 0 1 7 8 1 0 6 6 2 2 7 10 0 7
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
13 20 0 4 6 15 0 0 2 3 5 1 1 6 10 4
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
1 4 1 1 0 12 1 0 0 3 0 0 0 0 0 9
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
48 76 152 71
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
29 101 58 159
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
11 94 177 65
ND3 (size: 1042 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 14 (4.05%)
Alanine (Ala, A)
n = 17 (4.91%)
Serine (Ser, S)
n = 27 (7.8%)
Threonine (Thr, T)
n = 40 (11.56%)
Cysteine (Cys, C)
n = 0 (0%)
Valine (Val, V)
n = 11 (3.18%)
Leucine (Leu, L)
n = 53 (15.32%)
Isoleucine (Ile, I)
n = 37 (10.69%)
Methionine (Met, M)
n = 44 (12.72%)
Proline (Pro, P)
n = 19 (5.49%)
Phenylalanine (Phe, F)
n = 14 (4.05%)
Tyrosine (Tyr, Y)
n = 8 (2.31%)
Tryptophan (Trp, W)
n = 10 (2.89%)
Aspartic acid (Asp, D)
n = 1 (0.29%)
Glutamic acid (Glu, E)
n = 5 (1.45%)
Asparagine (Asn, N)
n = 16 (4.62%)
Glutamine (Gln, Q)
n = 10 (2.89%)
Histidine (His, H)
n = 5 (1.45%)
Lysine (Lys, K)
n = 13 (3.76%)
Arginine (Arg, R)
n = 3 (0.87%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
20 17 41 5 10 23 1 13 10 0 4 4 3 0 8 6
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
3 0 0 1 7 8 1 0 6 6 2 2 7 10 0 7
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
13 20 0 4 6 15 0 0 2 3 5 1 1 6 10 4
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
1 4 1 1 0 12 1 0 0 3 0 0 0 0 0 9
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
48 76 152 71
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
29 101 58 159
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
11 94 177 65
ND4 (size: 1378 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 18 (3.93%)
Alanine (Ala, A)
n = 26 (5.68%)
Serine (Ser, S)
n = 42 (9.17%)
Threonine (Thr, T)
n = 36 (7.86%)
Cysteine (Cys, C)
n = 3 (0.66%)
Valine (Val, V)
n = 17 (3.71%)
Leucine (Leu, L)
n = 93 (20.31%)
Isoleucine (Ile, I)
n = 39 (8.52%)
Methionine (Met, M)
n = 36 (7.86%)
Proline (Pro, P)
n = 19 (4.15%)
Phenylalanine (Phe, F)
n = 22 (4.8%)
Tyrosine (Tyr, Y)
n = 17 (3.71%)
Tryptophan (Trp, W)
n = 13 (2.84%)
Aspartic acid (Asp, D)
n = 3 (0.66%)
Glutamic acid (Glu, E)
n = 9 (1.97%)
Asparagine (Asn, N)
n = 23 (5.02%)
Glutamine (Gln, Q)
n = 11 (2.4%)
Histidine (His, H)
n = 11 (2.4%)
Lysine (Lys, K)
n = 11 (2.4%)
Arginine (Arg, R)
n = 10 (2.18%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
30 9 30 13 17 35 5 20 10 1 4 3 10 0 8 14
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
6 0 3 6 10 10 0 3 8 6 1 3 7 9 0 4
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
13 19 0 7 11 12 1 2 9 11 6 1 3 9 14 4
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
7 9 0 0 3 11 0 0 2 8 0 0 0 0 0 12
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
73 121 156 109
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
55 112 85 207
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
18 136 201 104
ND4L (size: 297 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 4 (4.08%)
Alanine (Ala, A)
n = 9 (9.18%)
Serine (Ser, S)
n = 9 (9.18%)
Threonine (Thr, T)
n = 5 (5.1%)
Cysteine (Cys, C)
n = 3 (3.06%)
Valine (Val, V)
n = 8 (8.16%)
Leucine (Leu, L)
n = 22 (22.45%)
Isoleucine (Ile, I)
n = 4 (4.08%)
Methionine (Met, M)
n = 10 (10.2%)
Proline (Pro, P)
n = 2 (2.04%)
Phenylalanine (Phe, F)
n = 4 (4.08%)
Tyrosine (Tyr, Y)
n = 4 (4.08%)
Tryptophan (Trp, W)
n = 0 (0%)
Aspartic acid (Asp, D)
n = 1 (1.02%)
Glutamic acid (Glu, E)
n = 2 (2.04%)
Asparagine (Asn, N)
n = 5 (5.1%)
Glutamine (Gln, Q)
n = 2 (2.04%)
Histidine (His, H)
n = 2 (2.04%)
Lysine (Lys, K)
n = 1 (1.02%)
Arginine (Arg, R)
n = 1 (1.02%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
3 1 9 3 2 11 1 5 2 0 1 2 4 1 1 3
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
1 0 3 0 3 5 1 0 1 3 0 1 1 0 0 1
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
1 3 0 1 4 3 0 0 1 4 0 0 0 3 2 1
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
1 2 0 0 1 1 0 0 0 1 0 0 0 1 0 0
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
24 24 26 25
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
9 24 18 48
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
4 26 50 19
ND5 (size: 1821 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 28 (4.62%)
Alanine (Ala, A)
n = 42 (6.93%)
Serine (Ser, S)
n = 47 (7.76%)
Threonine (Thr, T)
n = 60 (9.9%)
Cysteine (Cys, C)
n = 5 (0.83%)
Valine (Val, V)
n = 17 (2.81%)
Leucine (Leu, L)
n = 83 (13.7%)
Isoleucine (Ile, I)
n = 60 (9.9%)
Methionine (Met, M)
n = 40 (6.6%)
Proline (Pro, P)
n = 26 (4.29%)
Phenylalanine (Phe, F)
n = 49 (8.09%)
Tyrosine (Tyr, Y)
n = 17 (2.81%)
Tryptophan (Trp, W)
n = 12 (1.98%)
Aspartic acid (Asp, D)
n = 12 (1.98%)
Glutamic acid (Glu, E)
n = 11 (1.82%)
Asparagine (Asn, N)
n = 36 (5.94%)
Glutamine (Gln, Q)
n = 19 (3.14%)
Histidine (His, H)
n = 12 (1.98%)
Lysine (Lys, K)
n = 22 (3.63%)
Arginine (Arg, R)
n = 8 (1.32%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
31 29 35 10 14 38 6 15 18 1 6 3 8 0 21 28
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
5 1 4 9 13 20 0 7 8 12 1 5 13 8 0 13
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
11 35 1 9 11 13 1 3 10 9 8 1 0 15 21 3
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
9 9 2 4 8 22 0 3 2 3 0 0 0 1 0 11
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
110 133 231 133
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
66 162 130 249
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
18 192 248 149
ND6 (size: 528 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 26 (14.86%)
Alanine (Ala, A)
n = 6 (3.43%)
Serine (Ser, S)
n = 11 (6.29%)
Threonine (Thr, T)
n = 9 (5.14%)
Cysteine (Cys, C)
n = 1 (0.57%)
Valine (Val, V)
n = 22 (12.57%)
Leucine (Leu, L)
n = 18 (10.29%)
Isoleucine (Ile, I)
n = 17 (9.71%)
Methionine (Met, M)
n = 12 (6.86%)
Proline (Pro, P)
n = 3 (1.71%)
Phenylalanine (Phe, F)
n = 13 (7.43%)
Tyrosine (Tyr, Y)
n = 10 (5.71%)
Tryptophan (Trp, W)
n = 4 (2.29%)
Aspartic acid (Asp, D)
n = 4 (2.29%)
Glutamic acid (Glu, E)
n = 9 (5.14%)
Asparagine (Asn, N)
n = 4 (2.29%)
Glutamine (Gln, Q)
n = 2 (1.14%)
Histidine (His, H)
n = 0 (0%)
Lysine (Lys, K)
n = 3 (1.71%)
Arginine (Arg, R)
n = 1 (0.57%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
16 1 4 1 1 1 0 8 2 0 7 0 3 12 12 1
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
8 1 0 3 0 2 1 10 0 8 8 3 0 0 0 5
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
0 2 2 4 1 0 2 4 0 8 2 3 7 4 0 0
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
0 1 8 4 0 2 1 1 0 0 0 0 0 1 0 1
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
67 9 49 51
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
36 25 33 82
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
52 6 35 83
Total protein-coding genes (size: 11403 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 217 (5.71%)
Alanine (Ala, A)
n = 240 (6.32%)
Serine (Ser, S)
n = 279 (7.35%)
Threonine (Thr, T)
n = 314 (8.27%)
Cysteine (Cys, C)
n = 23 (0.61%)
Valine (Val, V)
n = 186 (4.9%)
Leucine (Leu, L)
n = 586 (15.43%)
Isoleucine (Ile, I)
n = 338 (8.9%)
Methionine (Met, M)
n = 261 (6.87%)
Proline (Pro, P)
n = 190 (5.0%)
Phenylalanine (Phe, F)
n = 250 (6.58%)
Tyrosine (Tyr, Y)
n = 129 (3.4%)
Tryptophan (Trp, W)
n = 104 (2.74%)
Aspartic acid (Asp, D)
n = 68 (1.79%)
Glutamic acid (Glu, E)
n = 97 (2.55%)
Asparagine (Asn, N)
n = 165 (4.34%)
Glutamine (Gln, Q)
n = 92 (2.42%)
Histidine (His, H)
n = 94 (2.47%)
Lysine (Lys, K)
n = 95 (2.5%)
Arginine (Arg, R)
n = 63 (1.66%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
210 128 221 80 85 239 32 134 89 3 47 41 80 18 135 115
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
40 5 18 51 78 107 4 36 60 96 25 42 58 89 1 64
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
67 174 9 52 64 98 8 19 38 82 47 10 16 74 91 37
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
57 80 17 26 42 90 5 7 14 39 3 1 0 7 0 94
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
808 875 1231 885
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
465 966 747 1621
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
191 1003 1638 967 

>NC_020744.1 Rusa alfredi isolate CYTO mitochondrion, complete genome
GTTAATGTAGCTTAAACAGTTAAAGCAAGGCACTGAAAATGCCTAGATGAGTGTATTAACTCCATAAACA
CACAGGTTTGGTCCCAGCCTTCCTATTAACCCTTAATAGACTTACACATGCAAGCATCCGCACCCCAGTG
AAAATGCCCTCTAAGTTAATAAGACTAAGAGGAGCTGGTATCAAGCACACACCCGTAGCTCACGACACCT
TGCACAGCCACACCCCCACGGGAGACAGCAGTGATAAAAATTAAGCCATAAACGAAAGTTTGACTAAGTC
ATATTAATCAGGGTTGGTAAATTTCGTGCCAGCCACCGCGGCCATACGATTAACCCAAGTTAATAGGCAC
ACGGCGTAAAGTGTGTTAAAGCACTATACTAAATAAAGTTAAATTCCAATTAAGCTGTAAAAAGCCATAA
TTGCAATAAAAATAAACAACGAAAGTAACTTTACAACCGCTGAAACACGATAGCTAGGACCCAAACTGGG
ATTAGATACCCCACTATGCCTAGCCTTAAACACAAATAGTTGTGTAAACAAAACTACTCGCCAGAGTACT
ACCGGCAATAGCTTAAAACTCAAAGGACTTGGCGGTGCTTTATACCCTTCTAGAGGAGCCTGTTCTATAA
TCGATAAACCCCGATAAACCTCACCATTCCTTGCTAATACAGTCTATATACCGCCATCTTCAGCAAACCC
TAAAAAGGTACAAAAGTAAGCACAATCATAATACATAAAAACGTTAGGTCAAGGTGTAACCTATGGAACG
GAAAGAAATGGGCTACATTTTCTAATCTAAGAATAATCCAATACGAAAGTTATTATGAAATTAATAACCA
AAGGAGGATTTAGCAGTAAACTAAGAATAGAGTGCTTAGTTGAATTAGGCCATGAAGCACGCACACACCG
CCCGTCACCCTCCTCAAGTAGGCACAATACACTCAAACTTATTTACACGTATTAATCATATGAGAGGAGA
CAAGTCGTAACAAGGTAAGCATACTGGAAAGTGTGCTTGGATAAATCAAGATATAGCTTAAATAAAGCAC
CTAGTTTACACCTAGAAGATTTCACATATCATGAATATCTTGAACCAATTCTAGCCCGCAAGCCCATTCA
CACCAAATTATTAATACACTATAAAATAAAACATTTATTTAACAACAAAAAGTATAGGAGATAGAAATTT
TAATACGGCGCCATAGAGAAAGTACCGTAAGGGAATGATGAAAGAAAAAAAAATTAAAGTACAAAAAAGC
AAAGATTACCCCTTGTACCTTTTGCATAATGAATTAACTAGTAAAAACTTAACAAAATGAATTTCAGCTA
AGTACCCCGAAACCAGACGAGCTACTTATGAACAATTTATCAAGAACCAACTCATCTATGTAGCAAAATA
GTGAGAAGATTTGTAAGTAGAGGTGAAACGCCCAACGAGCCTGGTGATAGCTGGTTGTCCAGAAAATGAA
TATTAGTTCAGCTTTAAAAATACCAAAAATAGGAACAAATTACAATGTATTTTTAAAAGTTAGTCTAAAA
AGGTACAGCCTTTTAGAAATGGATACAACCTTGACTAGAGAGTAAACCTTAACATTAAACCATAGTAGGC
CTAAAAGCAGCCACCAATTAAGAAAGCGTTAAAGCTCAACAATAAAATAATAACAATTCCAATAATAAAT
AGTCAACTCCTAATCTAATACTGGACTAATCTATTAAGAATAGAAGCAATAATGTTAATATGAGTAACAA
GAAATAATTTCTCCCCGCATAAGTTTAAGTCAGTATCTGATAATACCCTGACTATTAACAGCAAAATAAG
AATAACCCAACTATAAATAACTTATTAACTATACTGTTAATCCGACACAGGAATGCACTTAAGGAAAGAT
TAAAAGAAGTAAAAGGAACTCGGCAAACACTAAACCCCGCCTGTTTACCAAAAACATCACCTCCAGCATA
ACTAGTATTGGAGGCACTGCCTGCCCAGTGACGACCGTTAAACGGCCGCGGTATCCTGACCGTGCAAAGG
TAGCATAATCACTTGTTCTCTAAATAGGGACTTGTATGAATGGCCACACGAGGGTTTTACTGTCTCTTAC
TTCCAATCAGTGAAATTGACCTTCCCGTGAAGAGGCGGGAATATATTAATAAGACGAGAAGACCCTATGG
AGCTTTAACTACTTAGCCCAAAGAAACAAATTTCATCTCTAAGGAAACAACAACACTCTTTATGGGCTAA
CAGCTTTGGTTGGGGTGACCTCGGAGAACAAGAAATCCTCCGAGCGATTTTAAAGACTAGACCTACAAGT
CGAATCACACTAATCGTTTATTGATCCAAAAAATTGATCAACGGAACAAGTTACCCTAGGGATAACAGCG
CAATCCTATTCAAGAGTCCATATCGACAATAGGGTTTACGACCTCGATGTTGGATCAGGACATCCCGATG
GTGCAACCGCTATCAAAGGTTCGTTTGTTCAACGATTAAAGTCCTACGTGATCTGAGTTCAGACCGGAGT
AATCCAGGTCGGTTTCTATCTATTATGTATTTCTCCCAGTACGAAAGGACCAGAGAAATAAGGCCAACTT
CAAACAAGCGCCTTAAATTAGTTAATGATATCATCTTAATTAACCTCACAAACAAACTTTGCCCTAGAAA
AGGGCTTTGTTAAGGTGGCAGAGCCCGGTAATTGCATAAAACTTAAAACTTTATAATCAGAGGTTCAAAT
CCTCTTCTTAACAAAATGTTTATAATCAATATCTTAATACTAATTATTCCCATTCTTTTAGCCGTGGCAT
TCCTTACACTAGTAGAACGGAAAGTCCTAGGATATATACAATTTCGAAAAGGCCCAAACGTTGTAGGTCC
CTATGGCCTACTCCAACCTATTGCAGACGCCATTAAACTCTTTATTAAAGAACCACTACGACCCGCCACA
TCTTCAATTTCAATATTTATCCTAGCCCCTATTATAGCCCTAAGCCTAGCCCTAACCATATGAATCCCCC
TACCCATGCCATATCCCCTCATTAACATAAACCTAGGGGTCCTATTTATACTAGCAATATCAAGCCTAGC
CGTGTATTCTATTCTCTGATCGGGCTGAGCTTCCAATTCTAAATATGCACTAATCGGAGCCCTGCGGGCA
GTAGCACAAACAATCTCATATGAAGTAACACTAGCAATTATTCTACTGTCCGTTCTCCTAATAAACGGAT
CTTTTACACTCTCCACTTTAATCATTACACAAGAACAAGTATGACTTATCTTTCCAGCATGACCCCTAGC
AATAATGTGATTCATCTCGACACTAGCAGAAACAAACCGAGCCCCATTTGATCTCACCGAAGGTGAATCA
GAACTAGTTTCCGGCTTTAACGTAGAATATGCAGCAGGACCATTTGCCCTATTTTTTATAGCAGAATATG
CAAATATTATTATAATAAATATTTTCACAACAATCTTATTCTTAGGAGCATTTCACAACCCAGTTTTACC
AGAGCTTTACACAATCAATTTTATCATTAAATCCCTACTACTAACAATTTCCTTCTTATGAATCCGAGCA
TCTTATCCTCGATTCCGCTATGACCAACTAATACACCTACTATGAAAAAATTTTTTACCCTTAACATTAG
CCCTATGTATATGACATGTATCACTACCCATTTTTACATCAAGCATTCCTCCACAAACATAAGAAATATG
TCTGACAAAAGAGTTACTTTGATAGAGTAAATAATAGAGGTTTAAGCCCTCTTATTTCTAGAATTATAGG
AATTGAACCTACTCCCAAGAATTCAAAACTCTTTGTGCTTCCAAATACACCAAATTCTAATAGTAAGGTC
AGCTAATTAAGCTATCGGGCCCATACCCCGAAAATGTTGGTTTATATCCTTCCCGTACTAATAAACCCAA
TCATCTTCATTCTCATTTTATCAACAATAATAATAGGCACCATCATTGTCATAATTAGCTCCCATTGACT
ACTTGTCTGAATCGGATTTGAAATAAACATGCTCGCCATCATTCCTATCATAATGAAAAAGCATAATCCA
CGAGCTACAGAGGCAGCAACCAAATATTTCTTAACCCAATCAACAGCCTCAATACTACTAATAATAGCCA
TCATTATTAACCTAATATTTTCAGGCCAATGAACTGTAATAAAACTATTTAACCCAATAGCATCTATACT
CATAACAATGGCCCTCACTATAAAATTAGGAATAGCCCCATTCCATTTCTGAGTCCCAGAAGTAACACAA
GGCATCCCCCTATCATCAGGCCTAATTCTACTTACATGACAAAAATTAGCACCTATATCAGTTCTTTACC
AAATTTTCACATCTATTAACTTAAATATAATTTTAACCATTTCCATTCTATCAATCATAATTGGGGGCTG
GGGGGGACTAAACCAAACCCAATTACGAAAAATTATAGCATACTCATCAATCGCCCACATAGGCTGAATA
ACAGCGATCTTACCATATAATCCCACAATAACATTACTAAATTTAATCATTTATATTATCATAACTTCCA
CCATATTCACACTATTTATAGCCAACTCAACTACCACCACACTATCACTATCCCATACCTGAAACAAAAT
ACCCGTAATAACTATCCTAGTTCTCGTCACCCTCCTATCAATAGGAGGACTTCCCCCACTATCAGGATTT
ATACCAAAATGAATAATTATCCAAGAATTGACAAAAAACGATAGCCTCATTATACCCACCCTCATAGCAA
TTACAGCATTACTAAACTTATACTTTTACATACGACTCACATACTCCACTGCACTAACAATATTTCCCTC
TACAAATAATATAAAAATAAAATGACAATTTTCCACCACAAAACAAATAACCCTTTTACCCACAATAGTT
GTTCTGTCTACTATACTACTACCACTCACACCAATCCTATCAATCCTAGAATAGGAGTTTAGGTTAACCT
AGACCAAGAGCCTTCAAAGCCCTAAGCAAGTACAATATACTTAACTCCTGATTAAGGATTGCAAGACTAT
ATCTTACATCAATTGAATGCAAATCAACCACTTTAATTAAGCTAAATCCTCACTAGATTGGTGGGTTCCA
CCCCCACGAAACTTTAGTTAACAGCTAAACACCCTAATCAACTGGCTTCAATCTACTTCTCCCGCCGCGA
AAAAAAAAAGGCGGGAGAAGCCCCGGCAGAGTTTGAAGCTGCTTCTTTGAATTTGCAATTCAACATGAAA
TTTCACCACAGGACTTGGTAAAAAGAGGAGTATAAACCTCTGTCTTTAGATTTACAGTCTAATGCTTCAC
TCAGCCATTCTACCTATGTTCATTAACCGCTGATTATTTTCAACTAACCATAAAGATATCGGCACTCTAT
ATCTATTATTTGGTGCCTGAGCAGGCATAGTAGGAACAGCTTTAAGCCTGCTAATCCGTGCCGAACTGGG
CCAACCCGGTACTCTGCTTGGAGATGACCAAATTTATAATGTTATTGTAACCGCACATGCATTCGTAATA
ATTTTCTTCATAGTTATGCCAATTATAATTGGAGGATTTGGTAATTGACTAGTCCCCCTAATAATCGGTG
CCCCAGACATAGCATTTCCTCGAATAAACAATATAAGCTTTTGACTCCTCCCTCCTTCTTTCTTACTACT
TTTAGCATCATCTATAGTTGAAGCTGGCACAGGAACAGGCTGAACTGTATATCCCCCTCTAGCTGGCAAC
TTAGCTCACGCAGGAGCTTCAGTAGACTTAACTATTTTTTCTTTACACCTGGCAGGTGTCTCCTCAATTC
TAGGGGCCATTAACTTTATTACAACGATTATCAATATAAAACCTCCTGCTATATCACAATATCAAACCCC
CTTATTTGTGTGATCCGTATTAGTCACTGCTGTATTACTACTTCTCTCACTCCCTGTACTAGCAGCCGGA
ATTACAATACTATTAACAGACCGAAACTTAAATACAACCTTTTTTGACCCAGCAGGAGGCGGAGACCCTA
TTCTATACCAACATTTGTTCTGATTCTTTGGTCACCCTGAAGTATATATCCTTATTCTACCCGGCTTTGG
TATAATTTCCCATATCGTAACATACTACTCAGGAAAAAAAGAACCATTTGGGTACATAGGAATAGTCTGG
GCTATGATATCAATTGGGTTTTTAGGATTTATCGTATGGGCCCACCATATATTTACAGTCGGAATAGATG
TTGATACACGAGCCTATTTCACATCAGCTACCATAATTATTGCTATCCCAACTGGAGTAAAAGTCTTTAG
TTGATTAGCAACACTCCACGGAGGTAATATCAAATGATCACCTGCTATAATATGAGCTTTAGGCTTTATT
TTCCTTTTCACAGTTGGAGGCTTAACCGGGATTGTTCTTGCCAATTCTTCTCTCGACATTGTCCTTCATG
ACACATACTATGTAGTTGCACACTTCCACTATGTACTGTCAATAGGAGCTGTATTCGCTATTATGGGAGG
TTTTGTTCACTGATTCCCATTATTCTCAGGGTATACTCTTAATGACACATGAGCCAAAATCCACTTTGTA
ATTATATTTGTAGGTGTAAATATAACTTTCTTTCCACAACACTTCCTAGGATTATCTGGCATGCCACGAC
GCTACTCTGATTATCCAGATGCATACACAATATGAAATACCATTTCATCCATAGGCTCATTTATTTCTCT
GACAGCAGTTATATTAATAATCTTTATTATCTGAGAAGCATTTGCGTCCAAACGAGAAGTCTCAACCGTA
GAACTAACAACAACAAACTTAGAATGACTAAATGGATGCCCTCCACCATATCATACATTTGAAGAACCTA
CATACGTCAACTTAAAATAAGAAAGGAAGGAATCGAACCCCCCCATAGCTGGTTTCAAGCCAACATCATA
ACCACTATGTCTTTCTCAATTAATGAGGTGTTAGTAAAATATTACATAACTTTGTCAAAGTTAAGTTACA
GGTGAAAACCCCGTACATCTCATATGGCTTATCCCATACAGCTAGGTTTCCAAGATGCAACATCACCTAT
TATAGAAGAATTACTACATTTTCATGATCATACGCTAATAATTGTTTTTCTAATCAGCTCGCTAGTACTC
TATGTCATTTCATTGATGCTAACGACAAAACTAACACACACTAGCACAATAGACGCTCAAGAAGTAGAAA
TAATCTGAACAATCCTACCGGCTATTATCCTAATTTTGATTGCTCTCCCATCTTTACGAATTTTATATAT
GATAGACGAAATTAACAATCCATTTCTCACAGTAAAAACTATAGGACATCAATGATATTGAAGTTACGAA
TATACAGATTATGAAGACTTAAGCTTCGACTCCTATATAATTCCAACATCAGAATTAAAACCAGGAGAAC
TGCGACTACTAGAGGTAGATAACCGAGTTGTCCTACCAATAGAAATAACAATCCGAATATTAGTCTCCTC
TGAAGACGTACTGCACTCCTGAGCCGTACCCTCTCTAGGACTAAAAACGGACGCAATCCCAGGCCGCCTA
AACCAAACAACTCTTATATCGACTCGACCAGGCCTATATTACGGACAATGCTCTGAAATCTGCGGATCAA
ACCACAGCTTCATACCTATTGTTCTTGAACTAGTCCCACTAAATTATTTCGAAAAATGATCTGCATCAAT
ACTATAAAATCATTAAGAAGCTAAAATAGCACTAGCCTTTTAAGCTAGAGATTGAGAGTACAACACTCTC
CTTAATGAAATGCCACAACTAGACACGTCCACATGACTTATAATAATTATATCAATATTTCTAGCTCTCT
TCATTATTTTTCAATTAAAAATTTCAAAATACAATTTCCATTTTAATCCAGAACTAATATCAACCAAAAC
ACAAAAACAAAATATCCCTTGAGAAATAAAATGAACGAAAATCTATTTACCTCTTTTATTACCCCAATAA
TTCTAGGCCTTCCACTTGCAACCCTCATCGTTATATTCCCTAGCCTATTATTTCCAACATCAAATCGTCT
AGTAAATAATCGTCTTATTTCCCTCCAACAATGGATAATTCAACTTGTATCAAAACATATAATAGGAATT
CACAATGCCAAGGGGCAAACATGAACACTAATACTCATATCTCTAATTTTATTTATTGGGTCCACAAATC
TTCTGGGCTTATTACCCCACTCATTTACACCAACCACACAATTATCAATAAATCTAGGCATAGCCATTCC
CCTGTGAGCAGGAGCCGTAATCACAGGTTTCCGCAATAAAACTAAAGCATCACTTGCTCACTTTCTTCCA
CAAGGAACTCCAACCCCATTAATCCCCATACTAGTCATCATCGAAACTATTAGTCTTTTTATTCAACCAA
TCGCCTTAGCCGTACGACTAACTGCTAACATTACTGCAGGACACCTACTAATTCACCTAATTGGAGGAGC
TACACTTACACTAATAAGTATTAGTACTACATTAGCTCTTATCACATTTATTATTCTAGTCCTACTCACA
ATTCTTGAGTTTGCAGTAGCCATAATTCAAGCCTACGTATTTACCCTTCTAGTTAGCCTTTACTTGCATG
ACAACACATAATGACACACCAAACCCACGCTTATCACATAGTTAACCCAAGTCCTTGACCTCTTACAGGA
GCTCTATCAGCCCTATTAATAACTTCCGGCTTAATCATATGATTTCATTTCAACTCAATAATCCTACTAA
CACTTGGCCTAACAACAAACATACTTACAATATATCAATGATGACGAGATATTATTCGAGAAAGTACTTT
CCAAGGACACCATACTCCAACTGTCCAAAAAGGCCTCCGCTACGGAATAATTCTCTTCATTATTTCCGAA
GTTCTATTCTTCACCGGATTTTTCTGAGCATTCTACCACTCAAGCCTCGCCCCAACACCCGAGTTAGGCG
GGTGCTGACCCCCAACAGGCATTCACCCACTGAACCCCCTAGAAGTCCCACTACTCAATACCTCTGTTTT
ACTAGCCTCAGGAGTCTCTATCACCTGAGCCCATCATAGCCTTATAGAAGGAAACCGCAACCACATACTA
CAAGCCCTATTTATTACTATTGCACTAGGCGTCTATTTTACACTACTGCAAGCCTCAGAATATTATGAAG
CACCCTTTACTATTTCAGACGGAGTTTATGGCTCAACCTTCTTTGTAGCTACAGGCTTCCACGGCCTACA
TGTCATTATCGGATCTACTTTCTTAATTGTCTGCTTTTTCCGCCAATTAAAATTTCACTTTACTTCCAGC
CACCATTTTGGGTTCGAAGCCGCTGCCTGATACTGACACTTCGTAGACGTAGTATGATTATTCCTCTACG
TATCTATCTATTGATGAGGCTCCTATTCTTTTAGTATTAACTAGTACAGCTGACTTCCAATCAGCTAGTT
TCGGTATAACCCGAAAAAGAATAATAAACCTAATACTGGCTCTCTTAACTAACTTTACACTAGCCTCACT
ACTTGTTATTATTGCATTCTGACTCCCTCAATTAAACGTGTATTCAGAAAAAACAAGTCCATACGAATGT
GGATTTGACCCCATAGGGTCAGCTCGCTTGCCCTTCTCCATAAAATTTTTCCTAGTAGCCATTACATTCC
TTCTTTTTGATCTAGAAATTGCACTCCTTTTACCACTTCCATGAGCCTCCCAAACAAATGACCTAGGTAC
AATACTTACTATGGCCCTCTTCCTAATTTTATTATTAGCCGCAAGTCTAGCCTATGAATGAACCCAAAAG
GGACTAGAATGAACTGAATATGGTATTTAGTTTAAAACAAAATAAATGATTTCGACTCATTAGATTATGA
TTAAATTCATAATTACCAAATGCCTCTAGTGTATATAAATATTATAACAGCGTTCGTAGTAGCCCTAGCA
GGACTATTAATATATCGATCCCACCTTATATCCTCTCTCTTATGCCTAGAAGGAATAATATTATCCCTCT
TCGTAATAGCCTCCCTAACAATCCTAAACTCACATTTCACCCTAGCAAGCATAATACCCATTATTTTACT
AGTCTTTGCAGCCTGCGAAGCAGCACTAGGATTATCACTACTAGTTAAAGTATCAAATACATATGGCACT
GACTATGTCCAAAATCTTAACCTGCTTCAATGCTAAAATATATTATTCCTACAATAATATTAATACCCCT
GACCTGACTATCAAAAGGCAATATAATTTGAATTAATTCTACAACCCACAGCCTGTTAATTAGCCTCACA
AGCCTTCTCCTTATAAATCAATTCAGTGACAACAGCCTCAACTTCTCATTAGTATTCTTTTCCGACTCTC
TATCAACACCACTATTAATTTTAACCATATGACTCCTTCCCTTAATATTAATGGCTAGCCAACACCACTT
ATCAAAAGAAAATCTCACCCGAAAAAAACTATATATTACCATACTAGTCCTACTTCAACTATTCCTAATC
ATAACCTTTACTGCTATAGAATTAATTTTCTTCTACATTCTATTTGAAGCAACACTAATCCCAACACTCA
TTATTATTACCCGATGAGGTAACCAGACAGAACGCCTAAACGCCGGCCTCTACTTCCTGTTTTATACACT
AATAGGTTCTCTCCCACTACTGGTTGCATTAGTCTATCTCCAAAACATTACTGGATCTCTAAATTTCCTA
GTACTCCAATACTGAGTACAACCCCTATCCAACTCTTGATCAAACGTTTTCATATGACTAGCATGCATAA
TAGCCTTTATAGTAAAAATACCACTATATGGCCTCCACCTTTGACTGCCTAAAGCCCATGTAGAAGCCCC
CATTGCAGGCTCCATGGTTCTTGCAGCAATTCTACTAAAATTAGGAGGGTATGGTATAATACGAATTACA
ACATTCTTAAACCCACTTACCGAATTTATAGCATATCCCTTCATTATACTATCCTTATGAGGCATAATTA
TAACCAGCTCAATCTGCCTCCGCCAAACAGACCTTAAATCGTTAATTGCTTATTCCTCCGTTAGCCATAT
GGCACTTGTCATTGTAGCCATCCTCATTCAAACACCTTGAAGCTATATGGGAGCCACAGCCCTAATAATT
GCTCACGGCCTCACCTCATCTATGCTCTTCTGCCTAGCAAATTCCAACTATGAACGAATCCATAGTCGAA
CAATAATTCTAGCCCGAGGCCTACAAACCTTTCTTCCACTTATAGCCACCTGGTGACTTTTAGCAAGCCT
AACTAACCTAGCTCTCCCCCCAACAATTAACCTAATTGGAGAACTATTTGTAGTAGTATCCTCATTCTCA
TGATCCAACATCACAATCATTTTAATAGGACTAAATATAGTAATTACTGCTCTATACTCCCTTTATATAC
TAATCACAACACAACGAGGCAAATACACCCACCACATCAACAATATTTCACCCTCCTTCACACGAGAAAA
TGCCCTCATATCATTACATATATTGCCACTATTATTACTATCATTGAACCCAAAAATTATTTTAGGATCT
TTGTACTGTAAATATAGTTTAAAAAAAACATTAGATTGTGAATCTAATAATAGAAGCTTATACCTCCTTA
TTTACCGAAAAAGTATGCAAGAACTGCTAACTCTATGCCTCCGTGTATAATAACACGGCTTTTTCAAACT
TTTAGAGGATGACAGAAATCCGTTGGTCTTAGGAACCAAAAAATTGGTGCAACTCCAAATAAAAGTAATA
AACCTATTCTCCTCCTTTACACTAGTTACCCTACTACTACTAACTATTCCCATTATAGCTACAAGTTCTG
ATAACTACAAAACCCCTAATTACCCACTCTACGTAAAAACAATCACCTCATGTGCTTTCATCACTAGCAT
AATTCCCGCAATAATATTTATTCATACTGGCCAAGAAACAGTTATCTCAAACTGACACTGACTAACTATT
CAAACTATCAAACTATCACTTAGCTTCAAAATAGATTATTTCTCAACAATATTTGTACCAGTAGCATTAT
TTGTTACATGATCCATTATAGAATTCTCAATGTGGTATATACACTCAGACCCCAACATTAACCAATTCTT
CAAATATCTCCTCCTATTTCTTATTACTATACTCATTCTCGTCACAGCAAACAATCTATTTCAATTATTC
ATTGGATGAGAAGGTGTAGGAATTATATCATTTTTACTTATTGGATGATGATACGGACGAACAGACGCAA
ACACAGCAGCCCTACAAGCAATTTTATATAATCGTATCGGTGATATCGGTTTTATCCTAGCAATAGCATG
ATTCCTCACAAATCTTAACGCCTGAGACTTCCAACAAATTTTTATACTAAACCCAAGCGACTCTAATATA
CCCTTAATGGGCCTTGCACTAGCCGCAACTGGAAAATCTGCTCAATTTGGTCTGCACCCATGACTGCCCT
CTGCTATAGAGGGCCCCACTCCCGTCTCAGCATTACTCCACTCAAGCACAATAGTAGTAGCAGGTATCTT
CCTGTTAATCCGTTTCCACCCACTAACAGAAAATAACAAATTCGCACAATCCATTCTACTATGCCTAGGA
GCTATCACTACCCTATTTACAGCAATATGCGCCCTCACCCAGAATGATATCAAAAAAATTATCGCTTTTT
CTACATCCAGCCAACTAGGCCTCATAATAGTAACAATTGGTATTAACCAACCCTATCTAGCATTTCTCCA
TATCTGCACACACGCCTTTTTTAAAGCCATGCTGTTCATATGCTCTGGTTCTATCATCCACAGCCTAAAT
GACGAACAAGACATTCGAAAAATAGGGGGCCTATTCAAAGCCATGCCATTCACCACAACAGCCCTAATCA
TTGGCAGCCTTGCACTAACAGGAATACCTTTCCTTACTGGATTCTATTCCAAAGACGTAATCATTGAAGC
TGCTAACACGTCGTACACCAACGCCTGAGCCCTTTTAATAACACTAATCGCCACCTCCTTCACAGCCATC
TACAGCACCCGCATTATTTTCTTTGCACTCTTAGGACAACCCCGATTCCCAACCTTAATCACTATTAACG
AAAACAACCCCTTTCTAATAAATTCCATTAAACGCCTAATAATTGGAAGCCTTTTCGCAGGATTCATCAT
TTCCAACAACATCCCTCCAACAACAATTCCCCAATTAACAATACCCTATCATTTAAAAACAATAGCCCTA
ACAATAACAATCCTAGGCTTTATTTTAGCACTAGAAATCAGTAACATAACCCAAAACCTAAAATTCAATT
ACTCAACAAATATTTTCAAATTCTCCAATATACTAGGATATTTTCCTACAATCATACACCGTCTGGCTCC
TTACATAAATCTAACAATAAGTCAAAAATCAGCATCCTCTCTCCTAGACTTAATCTGACTCGAAAATATT
CTACCCAAAACAACTTCACTTATCCAAACAAAAATATCAATAATGGTTACAAACCAAAAAGGCTTAATCA
AACTGTATTTCCTCTCTTTTCTAGTTACAATCACTGTTAGCACAGTCCTATTTAATTTCCACGAGTAATC
TCCATAATAACCACCACACCAATCAACAAAGACCACCCAGTCACAATAACTAGTCAAGTACCATAACTGT
AGAGAGCCGCAATTCCCATAGCCTCCTCACTAAAAAATCCAGAATCTCCTGTATCATAAATAACCCAATC
TCCTAACCCATTAAATTGAAACACAATCTCCACCTCCTCATCTTTCAATACATAATAAACTATCATAATT
TCCATTAACAAACCAGTAACAAATGCCCCTAATACAGTCTTATTAGACACCCAAATCTCAGGATATTGCT
CCGTAGCTATTGCCGTTGTATAACCAAAAACCACTATCATCCCCCCTAAATAAATTAAGAACACCATTAA
ACCCAAAAAGGATCCACCAAAATTTAACACAATACCACAACCAACTCCACCACTCACAATTAACCCCAAC
CCCCCATAAATAGGCGAAGGTTTCGAAGAAAATCCTACAAAACCAAGCACAAAAATAATACTCAAGATAA
ACACAATGTATATCATCATTATTCTCACATGGAATCTAACCATGACTAATGATATGAAAAACCATCGTTG
TCATTCAACTATAAGAACACCAATGACCAATATCCGAAAAACCCACCCACTAATAAAAATTGTAAACAAC
GCATTCATTGACCTCCCAGCCCCATCAAACATTTCATCCTGATGGAACTTCGGCTCCCTACTAGGAATTT
GCCTAATCCTACAAATCCTCACAGGCCTGCTCCTAGCAATACACTACACACCTGATACAACAACAGCATT
TTCCTCTGTCTCCCATATCTGTCGAGATGTTAATTATGGCTGAATCATTCGATATATACACGCAAACGGG
GCATCAATATTTTTTATCTGCCTATTCATACATGTAGGGCGGGGCCTGTACTACGGATCATATACTTTTC
TAGAGACATGAAACATCGGAGTGATTCTCCTATTTACAATTATAGCCACAGCATTTATAGGATATGTCCT
ACCATGAGGACAAATATCATTCTGAGGAGCAACAGTCATCACCAATCTTCTCTCAGCAATTCCATATATT
GGTACAAACCTAGTCGAATGAATCTGAGGAGGCTTTTCAGTAGATAAAGCAACCCTAACCCGATTTTTCG
CTTTCCACTTTATTTTCCCATTTATCATCGCAGCACTTGCTATAGTACACTTACTCTTCCTTCACGAGAC
AGGATCCAATAACCCAACAGGAATCCCATCAGACGCAGACAAAATCCCCTTCCATCCTTACTATACCATT
AAAGATATCTTAGGCATCTTACTTCTAGTACTCCTCTTAATACTGCTAGTATTATTCGCACCAGACCTGC
TTGGAGACCCAGACAACTACACTCCAGCAAATCCACTTAACACACCCTCTCATATCAAACCTGAATGATA
TTTCCTATTTGCATACGCAATCCTACGATCAATTCCCAACAAGCTAGGAGGAGTATTAGCCCTAGTCTCA
TCCATCCTAATCTTAACTCTCATACCTCTTCTTCACACATCCAAACAACGCAGCATGACATTCCGACCAT
TCAGTCAATGCTTATTCTGAATCTTAGTAGCAGACCTACTAACACTCACATGAATTGGAGGACAACCAGT
TGAACACCCCTTTATCATTATTGGACAACTAGCATCTATCTTATACTTTTCCATTATCCTAGTCCTTATA
CCAATCACCAGCACAATCGAAAACAACCTCCTAAAATGAAGATAAGTCTTTGTAGTATACTCAATACACT
GGTCTTGTAAACCAAAAAAGGAGAACAACCAACCTCCCTAAGACTCAAGGAAGAAGCCATAGCCCCACTA
TCAACACCCAAAGCTGAAGTTCTATTTAAACTATTCCCTGATGCTTATTAATATAGCTCCATAAAAATCA
AGAACTTTATCAGTATTAAATTTTCAAAAAATTCCAATATTTTAATACAGCTTTCCACTCAACACCAAAT
TACATATTTACATCTCACAGCTACACAACAAAACATGTAGCATAATCTTTATGCGCTTATAGTACATAAA
ATTAATGTATTAGGACATATTATGTATAATAGTACATTACATTATCTGCCCCATGCTTATAAGCATGTAT
TTTTTATTATTTACAGTACATAGTACATATTATTGTCCATCGTACATGGCACATTAAGTCAAATCAGTCC
TTGTCAACATGCGTATCCCGTCCCCTAGATCACGAGCTTAATTACCATGCCGCGTGAAACCAGCAACCCG
CTGGGCAGGGATCCCTCTTCTCGCTCCGGGCCCATGAACTGTGGGGGTAGCTATTTAATGAACTTTATCA
GACATCTGGTTCTTTTTTCAGGGCCATCTCACCTAAAATCGCCCACTCCTTGCAATATAAGACATCTCGA
TGGACTAATGACTAATCAGCCCATGCTCACACATAACTGTGGTGTCATACATTTGGTATTTTTAATTTTT
GGGGGGATGCTTGGACTCAGCAATGGCCGTCTGAGGCCCCGTCCCGGAGCATGAATTGTAGCTGGACTTA
ACTGCATCTTGAGCATCCCCATAATGATAGGCATGGGCATGGCAGTCAATGGTCACAGGACATAACTATT
ATTTCATGGATCAACCCTAAGATCTATTTCCCCCCCCTTTTTAATTTCCCCCTTATATAGTTATCACCAT
TTTTAACACACTTTTCCCTAGATATTATTTTAAATTTATCACATTTCCAATACTCAAATTAGCACTCCAG
GGGGAGGTAAGTATATAAACGCCAATTTTTCTCTAATTATGCACA
Contact: Vadim E. Fraifeld, MD, PhD

Head: Lab for the Biology of Aging, The Shraga Segal Department of Microbiology, Immunology and Genetics, Faculty of Health Sciences, Ben-Gurion University of the Negev
P.O. Box 653, Beer-Sheva 8410501, Israel

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How to cite us:

If you would like to cite this database please use:
Toren D, Barzilay T, Tacutu R, Lehmann G, Muradian KK, Fraifeld VE. MitoAge: a database for comparative analysis of mitochondrial DNA, with a special focus on animal longevity. Nucleic Acids Res. 2016; 44(D1):D1262-5.