Viewing data for Clupea harengus
| Scientific name | Clupea harengus |
| Common name | Atlantic herring |
| Maximum lifespan | 22.00 years (Clupea harengus@AnAge) |
| Total mtDNA (size: 16701 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 7913 | 8788 | 4714 | 3199 | 4290 | 4498 |
| Base content per 1 kb (bases) | 474 | 526 | 282 | 192 | 257 | 269 |
| Base content (%) | 47.4% | 52.6% | ||||
| Total protein-coding genes (size: 11405 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 5450 | 5955 | 3357 | 2093 | 3085 | 2870 |
| Base content per 1 kb (bases) | 478 | 522 | 294 | 184 | 270 | 252 |
| Base content (%) | 47.8% | 52.2% | ||||
| D-loop (size: 1047 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 400 | 647 | 227 | 173 | 327 | 320 |
| Base content per 1 kb (bases) | 382 | 618 | 217 | 165 | 312 | 306 |
| Base content (%) | 38.2% | 61.8% | ||||
| Total tRNA-coding genes (size: 1553 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 758 | 795 | 413 | 345 | 358 | 437 |
| Base content per 1 kb (bases) | 488 | 512 | 266 | 222 | 231 | 281 |
| Base content (%) | 48.8% | 51.2% | ||||
| Total rRNA-coding genes (size: 2636 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 1271 | 1365 | 694 | 577 | 510 | 855 |
| Base content per 1 kb (bases) | 482 | 518 | 263 | 219 | 193 | 324 |
| Base content (%) | 48.2% | 51.8% | ||||
| 12S rRNA gene (size: 952 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 477 | 475 | 260 | 217 | 186 | 289 |
| Base content per 1 kb (bases) | 501 | 499 | 273 | 228 | 195 | 304 |
| Base content (%) | 50.1% | 49.9% | ||||
| 16S rRNA gene (size: 1684 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 794 | 890 | 434 | 360 | 324 | 566 |
| Base content per 1 kb (bases) | 471 | 529 | 258 | 214 | 192 | 336 |
| Base content (%) | 47.1% | 52.9% | ||||
| ATP6 (size: 685 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 315 | 370 | 212 | 103 | 199 | 171 |
| Base content per 1 kb (bases) | 460 | 540 | 309 | 150 | 291 | 250 |
| Base content (%) | 46.0% | 54.0% | ||||
| ATP8 (size: 168 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 72 | 96 | 49 | 23 | 45 | 51 |
| Base content per 1 kb (bases) | 429 | 571 | 292 | 137 | 268 | 304 |
| Base content (%) | 42.9% | 57.1% | ||||
| COX1 (size: 1551 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 715 | 836 | 413 | 302 | 444 | 392 |
| Base content per 1 kb (bases) | 461 | 539 | 266 | 195 | 286 | 253 |
| Base content (%) | 46.1% | 53.9% | ||||
| COX2 (size: 691 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 312 | 379 | 186 | 126 | 185 | 194 |
| Base content per 1 kb (bases) | 452 | 548 | 269 | 182 | 268 | 281 |
| Base content (%) | 45.2% | 54.8% | ||||
| COX3 (size: 785 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 384 | 401 | 235 | 149 | 212 | 189 |
| Base content per 1 kb (bases) | 489 | 511 | 299 | 190 | 270 | 241 |
| Base content (%) | 48.9% | 51.1% | ||||
| CYTB (size: 1141 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 532 | 609 | 322 | 210 | 329 | 280 |
| Base content per 1 kb (bases) | 466 | 534 | 282 | 184 | 288 | 245 |
| Base content (%) | 46.6% | 53.4% | ||||
| ND1 (size: 975 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 481 | 494 | 287 | 194 | 284 | 210 |
| Base content per 1 kb (bases) | 493 | 507 | 294 | 199 | 291 | 215 |
| Base content (%) | 49.3% | 50.7% | ||||
| ND2 (size: 1045 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 526 | 519 | 344 | 182 | 269 | 250 |
| Base content per 1 kb (bases) | 503 | 497 | 329 | 174 | 257 | 239 |
| Base content (%) | 50.3% | 49.7% | ||||
| ND3 (size: 349 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 167 | 182 | 98 | 69 | 106 | 76 |
| Base content per 1 kb (bases) | 479 | 521 | 281 | 198 | 304 | 218 |
| Base content (%) | 47.9% | 52.1% | ||||
| ND4 (size: 1381 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 685 | 696 | 421 | 264 | 359 | 337 |
| Base content per 1 kb (bases) | 496 | 504 | 305 | 191 | 260 | 244 |
| Base content (%) | 49.6% | 50.4% | ||||
| ND4L (size: 297 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 144 | 153 | 95 | 49 | 81 | 72 |
| Base content per 1 kb (bases) | 485 | 515 | 320 | 165 | 273 | 242 |
| Base content (%) | 48.5% | 51.5% | ||||
| ND5 (size: 1836 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 856 | 980 | 530 | 326 | 498 | 482 |
| Base content per 1 kb (bases) | 466 | 534 | 289 | 178 | 271 | 263 |
| Base content (%) | 46.6% | 53.4% | ||||
| ND6 (size: 522 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 267 | 255 | 168 | 99 | 80 | 175 |
| Base content per 1 kb (bases) | 511 | 489 | 322 | 190 | 153 | 335 |
| Base content (%) | 51.1% | 48.9% | ||||
| ATP6 (size: 685 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
Amino acid frequencies:
Glycine (Gly, G)
n = 11 (4.85%) 
Alanine (Ala, A)
n = 19 (8.37%) 
Serine (Ser, S)
n = 8 (3.52%) 
Threonine (Thr, T)
n = 22 (9.69%) 
Cysteine (Cys, C)
n = 0 (0%) 
Valine (Val, V)
n = 15 (6.61%) 
Leucine (Leu, L)
n = 52 (22.91%) 
Isoleucine (Ile, I)
n = 17 (7.49%) 
Methionine (Met, M)
n = 11 (4.85%) 
Proline (Pro, P)
n = 18 (7.93%) 
Phenylalanine (Phe, F)
n = 12 (5.29%) 
Tyrosine (Tyr, Y)
n = 5 (2.2%) 
Tryptophan (Trp, W)
n = 5 (2.2%) 
Aspartic acid (Asp, D)
n = 1 (0.44%) 
Glutamic acid (Glu, E)
n = 4 (1.76%) 
Asparagine (Asn, N)
n = 7 (3.08%) 
Glutamine (Gln, Q)
n = 9 (3.96%) 
Histidine (His, H)
n = 3 (1.32%) 
Lysine (Lys, K)
n = 2 (0.88%) 
Arginine (Arg, R)
n = 7 (3.08%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 11 | 6 | 3 | 16 | 9 | 16 | 4 | 5 | 6 | 3 | 6 | 4 | 4 | 1 | 7 | 5 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 8 | 0 | 0 | 2 | 6 | 10 | 1 | 2 | 4 | 2 | 3 | 3 | 8 | 5 | 2 | 7 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 8 | 7 | 0 | 0 | 0 | 3 | 0 | 0 | 5 | 1 | 4 | 0 | 2 | 4 | 3 | 0 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 3 | 3 | 1 | 0 | 1 | 2 | 0 | 1 | 2 | 4 | 0 | 0 | 0 | 0 | 0 | 5 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 50 | 82 | 64 | 32 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 28 | 62 | 31 | 107 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 25 | 68 | 75 | 60 | ||||||||||||
| ATP8 (size: 168 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: MPQLNPAPWFAILVFSWVVFLTIIPQKILAHNFNNEPTTMGAEKAKPEPWNWPWY* | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 1 (1.82%)
Alanine (Ala, A)
n = 5 (9.09%)
Serine (Ser, S)
n = 1 (1.82%)
Threonine (Thr, T)
n = 3 (5.45%)
Cysteine (Cys, C)
n = 0 (0%)
Valine (Val, V)
n = 3 (5.45%)
Leucine (Leu, L)
n = 4 (7.27%)
Isoleucine (Ile, I)
n = 4 (7.27%)
Methionine (Met, M)
n = 2 (3.64%)
Proline (Pro, P)
n = 8 (14.55%)
Phenylalanine (Phe, F)
n = 4 (7.27%)
Tyrosine (Tyr, Y)
n = 1 (1.82%)
Tryptophan (Trp, W)
n = 5 (9.09%)
Aspartic acid (Asp, D)
n = 0 (0%)
Glutamic acid (Glu, E)
n = 3 (5.45%)
Asparagine (Asn, N)
n = 5 (9.09%)
Glutamine (Gln, Q)
n = 2 (3.64%)
Histidine (His, H)
n = 1 (1.82%)
Lysine (Lys, K)
n = 3 (5.45%)
Arginine (Arg, R)
n = 0 (0%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 2 | 2 | 0 | 1 | 0 | 0 | 1 | 2 | 2 | 0 | 1 | 1 | 1 | 0 | 0 | 4 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 2 | 0 | 0 | 0 | 4 | 1 | 0 | 0 | 0 | 0 | 1 | 3 | 4 | 1 | 0 | 3 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 3 | 2 | 0 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 1 | 2 | 1 | 0 | 0 | 3 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 5 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 12 | 13 | 17 | 14 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 6 | 17 | 16 | 17 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 5 | 19 | 18 | 14 | ||||||||||||
| COX1 (size: 1551 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 46 (8.91%)
Alanine (Ala, A)
n = 47 (9.11%)
Serine (Ser, S)
n = 30 (5.81%)
Threonine (Thr, T)
n = 36 (6.98%)
Cysteine (Cys, C)
n = 1 (0.19%)
Valine (Val, V)
n = 41 (7.95%)
Leucine (Leu, L)
n = 63 (12.21%)
Isoleucine (Ile, I)
n = 40 (7.75%)
Methionine (Met, M)
n = 24 (4.65%)
Proline (Pro, P)
n = 28 (5.43%)
Phenylalanine (Phe, F)
n = 42 (8.14%)
Tyrosine (Tyr, Y)
n = 18 (3.49%)
Tryptophan (Trp, W)
n = 17 (3.29%)
Aspartic acid (Asp, D)
n = 14 (2.71%)
Glutamic acid (Glu, E)
n = 11 (2.13%)
Asparagine (Asn, N)
n = 14 (2.71%)
Glutamine (Gln, Q)
n = 8 (1.55%)
Histidine (His, H)
n = 19 (3.68%)
Lysine (Lys, K)
n = 9 (1.74%)
Arginine (Arg, R)
n = 8 (1.55%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 27 | 13 | 5 | 19 | 6 | 30 | 5 | 2 | 7 | 1 | 12 | 5 | 17 | 7 | 14 | 28 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 19 | 0 | 1 | 6 | 20 | 18 | 3 | 5 | 3 | 22 | 16 | 9 | 9 | 8 | 2 | 8 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 13 | 12 | 3 | 3 | 8 | 12 | 2 | 1 | 4 | 4 | 14 | 1 | 1 | 8 | 6 | 4 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 15 | 8 | 3 | 5 | 9 | 7 | 2 | 2 | 0 | 5 | 1 | 0 | 0 | 1 | 0 | 16 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 159 | 123 | 128 | 107 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 77 | 136 | 94 | 210 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 66 | 154 | 170 | 127 | ||||||||||||
| COX2 (size: 691 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 9 (3.93%)
Alanine (Ala, A)
n = 15 (6.55%)
Serine (Ser, S)
n = 17 (7.42%)
Threonine (Thr, T)
n = 9 (3.93%)
Cysteine (Cys, C)
n = 2 (0.87%)
Valine (Val, V)
n = 23 (10.04%)
Leucine (Leu, L)
n = 30 (13.1%)
Isoleucine (Ile, I)
n = 18 (7.86%)
Methionine (Met, M)
n = 12 (5.24%)
Proline (Pro, P)
n = 14 (6.11%)
Phenylalanine (Phe, F)
n = 7 (3.06%)
Tyrosine (Tyr, Y)
n = 9 (3.93%)
Tryptophan (Trp, W)
n = 5 (2.18%)
Aspartic acid (Asp, D)
n = 13 (5.68%)
Glutamic acid (Glu, E)
n = 14 (6.11%)
Asparagine (Asn, N)
n = 5 (2.18%)
Glutamine (Gln, Q)
n = 8 (3.49%)
Histidine (His, H)
n = 10 (4.37%)
Lysine (Lys, K)
n = 4 (1.75%)
Arginine (Arg, R)
n = 6 (2.62%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 13 | 5 | 6 | 7 | 7 | 8 | 2 | 3 | 7 | 1 | 4 | 7 | 10 | 2 | 1 | 6 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 6 | 1 | 1 | 2 | 6 | 5 | 2 | 1 | 0 | 5 | 3 | 4 | 3 | 4 | 3 | 2 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 1 | 5 | 1 | 5 | 5 | 4 | 0 | 0 | 3 | 4 | 5 | 1 | 3 | 1 | 4 | 2 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 8 | 11 | 3 | 4 | 9 | 4 | 0 | 0 | 2 | 4 | 0 | 0 | 0 | 0 | 0 | 4 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 74 | 62 | 51 | 43 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 25 | 52 | 63 | 90 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 27 | 72 | 80 | 51 | ||||||||||||
| COX3 (size: 785 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 22 (8.46%)
Alanine (Ala, A)
n = 24 (9.23%)
Serine (Ser, S)
n = 15 (5.77%)
Threonine (Thr, T)
n = 23 (8.85%)
Cysteine (Cys, C)
n = 2 (0.77%)
Valine (Val, V)
n = 20 (7.69%)
Leucine (Leu, L)
n = 30 (11.54%)
Isoleucine (Ile, I)
n = 12 (4.62%)
Methionine (Met, M)
n = 6 (2.31%)
Proline (Pro, P)
n = 12 (4.62%)
Phenylalanine (Phe, F)
n = 25 (9.62%)
Tyrosine (Tyr, Y)
n = 12 (4.62%)
Tryptophan (Trp, W)
n = 12 (4.62%)
Aspartic acid (Asp, D)
n = 5 (1.92%)
Glutamic acid (Glu, E)
n = 9 (3.46%)
Asparagine (Asn, N)
n = 1 (0.38%)
Glutamine (Gln, Q)
n = 8 (3.08%)
Histidine (His, H)
n = 16 (6.15%)
Lysine (Lys, K)
n = 2 (0.77%)
Arginine (Arg, R)
n = 5 (1.92%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 6 | 6 | 2 | 6 | 3 | 11 | 4 | 4 | 4 | 4 | 5 | 4 | 11 | 0 | 9 | 16 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 4 | 1 | 1 | 1 | 12 | 11 | 0 | 3 | 5 | 10 | 4 | 4 | 5 | 3 | 0 | 3 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 13 | 6 | 1 | 2 | 4 | 4 | 2 | 0 | 3 | 4 | 8 | 1 | 2 | 0 | 1 | 2 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 14 | 7 | 2 | 3 | 2 | 2 | 0 | 0 | 2 | 2 | 1 | 0 | 0 | 0 | 0 | 11 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 80 | 65 | 47 | 69 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 44 | 71 | 53 | 93 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 25 | 99 | 88 | 49 | ||||||||||||
| CYTB (size: 1141 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 27 (7.12%)
Alanine (Ala, A)
n = 37 (9.76%)
Serine (Ser, S)
n = 25 (6.6%)
Threonine (Thr, T)
n = 20 (5.28%)
Cysteine (Cys, C)
n = 3 (0.79%)
Valine (Val, V)
n = 27 (7.12%)
Leucine (Leu, L)
n = 59 (15.57%)
Isoleucine (Ile, I)
n = 25 (6.6%)
Methionine (Met, M)
n = 11 (2.9%)
Proline (Pro, P)
n = 21 (5.54%)
Phenylalanine (Phe, F)
n = 31 (8.18%)
Tyrosine (Tyr, Y)
n = 14 (3.69%)
Tryptophan (Trp, W)
n = 12 (3.17%)
Aspartic acid (Asp, D)
n = 10 (2.64%)
Glutamic acid (Glu, E)
n = 5 (1.32%)
Asparagine (Asn, N)
n = 18 (4.75%)
Glutamine (Gln, Q)
n = 6 (1.58%)
Histidine (His, H)
n = 12 (3.17%)
Lysine (Lys, K)
n = 9 (2.37%)
Arginine (Arg, R)
n = 8 (2.11%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 16 | 9 | 6 | 12 | 11 | 15 | 10 | 10 | 5 | 1 | 7 | 7 | 8 | 5 | 9 | 22 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 5 | 0 | 3 | 8 | 12 | 16 | 1 | 1 | 1 | 13 | 12 | 3 | 7 | 5 | 6 | 7 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 5 | 6 | 2 | 4 | 7 | 10 | 2 | 0 | 2 | 3 | 11 | 1 | 1 | 3 | 15 | 3 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 9 | 4 | 1 | 5 | 5 | 4 | 5 | 0 | 0 | 8 | 0 | 0 | 0 | 0 | 0 | 11 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 106 | 95 | 85 | 94 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 52 | 101 | 74 | 153 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 52 | 126 | 121 | 81 | ||||||||||||
| ND1 (size: 975 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 17 (5.25%)
Alanine (Ala, A)
n = 37 (11.42%)
Serine (Ser, S)
n = 23 (7.1%)
Threonine (Thr, T)
n = 22 (6.79%)
Cysteine (Cys, C)
n = 1 (0.31%)
Valine (Val, V)
n = 17 (5.25%)
Leucine (Leu, L)
n = 60 (18.52%)
Isoleucine (Ile, I)
n = 19 (5.86%)
Methionine (Met, M)
n = 15 (4.63%)
Proline (Pro, P)
n = 23 (7.1%)
Phenylalanine (Phe, F)
n = 20 (6.17%)
Tyrosine (Tyr, Y)
n = 11 (3.4%)
Tryptophan (Trp, W)
n = 8 (2.47%)
Aspartic acid (Asp, D)
n = 4 (1.23%)
Glutamic acid (Glu, E)
n = 11 (3.4%)
Asparagine (Asn, N)
n = 10 (3.09%)
Glutamine (Gln, Q)
n = 6 (1.85%)
Histidine (His, H)
n = 5 (1.54%)
Lysine (Lys, K)
n = 7 (2.16%)
Arginine (Arg, R)
n = 8 (2.47%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 15 | 4 | 3 | 14 | 7 | 17 | 11 | 9 | 2 | 4 | 2 | 7 | 4 | 4 | 8 | 12 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 12 | 0 | 1 | 10 | 10 | 9 | 8 | 5 | 3 | 1 | 8 | 4 | 13 | 3 | 3 | 5 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 10 | 5 | 2 | 6 | 7 | 2 | 4 | 1 | 3 | 5 | 6 | 1 | 2 | 5 | 5 | 1 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 4 | 7 | 4 | 1 | 3 | 5 | 2 | 0 | 0 | 4 | 4 | 0 | 0 | 0 | 1 | 7 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 86 | 91 | 77 | 71 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 38 | 101 | 55 | 131 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 70 | 95 | 78 | 82 | ||||||||||||
| ND2 (size: 1045 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 16 (4.61%)
Alanine (Ala, A)
n = 42 (12.1%)
Serine (Ser, S)
n = 23 (6.63%)
Threonine (Thr, T)
n = 47 (13.54%)
Cysteine (Cys, C)
n = 3 (0.86%)
Valine (Val, V)
n = 14 (4.03%)
Leucine (Leu, L)
n = 66 (19.02%)
Isoleucine (Ile, I)
n = 20 (5.76%)
Methionine (Met, M)
n = 18 (5.19%)
Proline (Pro, P)
n = 21 (6.05%)
Phenylalanine (Phe, F)
n = 11 (3.17%)
Tyrosine (Tyr, Y)
n = 9 (2.59%)
Tryptophan (Trp, W)
n = 11 (3.17%)
Aspartic acid (Asp, D)
n = 2 (0.58%)
Glutamic acid (Glu, E)
n = 4 (1.15%)
Asparagine (Asn, N)
n = 9 (2.59%)
Glutamine (Gln, Q)
n = 13 (3.75%)
Histidine (His, H)
n = 6 (1.73%)
Lysine (Lys, K)
n = 8 (2.31%)
Arginine (Arg, R)
n = 5 (1.44%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 13 | 7 | 8 | 12 | 15 | 15 | 14 | 7 | 6 | 7 | 5 | 4 | 4 | 1 | 7 | 4 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 10 | 1 | 2 | 4 | 20 | 16 | 2 | 0 | 3 | 4 | 9 | 6 | 9 | 5 | 1 | 11 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 21 | 8 | 7 | 7 | 7 | 2 | 2 | 0 | 5 | 2 | 7 | 1 | 3 | 4 | 5 | 0 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 6 | 2 | 2 | 2 | 0 | 4 | 4 | 3 | 0 | 1 | 1 | 0 | 0 | 0 | 0 | 10 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 78 | 101 | 107 | 62 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 40 | 128 | 51 | 129 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 64 | 115 | 92 | 77 | ||||||||||||
| ND3 (size: 1045 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 16 (4.61%)
Alanine (Ala, A)
n = 42 (12.1%)
Serine (Ser, S)
n = 23 (6.63%)
Threonine (Thr, T)
n = 47 (13.54%)
Cysteine (Cys, C)
n = 3 (0.86%)
Valine (Val, V)
n = 14 (4.03%)
Leucine (Leu, L)
n = 66 (19.02%)
Isoleucine (Ile, I)
n = 20 (5.76%)
Methionine (Met, M)
n = 18 (5.19%)
Proline (Pro, P)
n = 21 (6.05%)
Phenylalanine (Phe, F)
n = 11 (3.17%)
Tyrosine (Tyr, Y)
n = 9 (2.59%)
Tryptophan (Trp, W)
n = 11 (3.17%)
Aspartic acid (Asp, D)
n = 2 (0.58%)
Glutamic acid (Glu, E)
n = 4 (1.15%)
Asparagine (Asn, N)
n = 9 (2.59%)
Glutamine (Gln, Q)
n = 13 (3.75%)
Histidine (His, H)
n = 6 (1.73%)
Lysine (Lys, K)
n = 8 (2.31%)
Arginine (Arg, R)
n = 5 (1.44%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 13 | 7 | 8 | 12 | 15 | 15 | 14 | 7 | 6 | 7 | 5 | 4 | 4 | 1 | 7 | 4 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 10 | 1 | 2 | 4 | 20 | 16 | 2 | 0 | 3 | 4 | 9 | 6 | 9 | 5 | 1 | 11 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 21 | 8 | 7 | 7 | 7 | 2 | 2 | 0 | 5 | 2 | 7 | 1 | 3 | 4 | 5 | 0 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 6 | 2 | 2 | 2 | 0 | 4 | 4 | 3 | 0 | 1 | 1 | 0 | 0 | 0 | 0 | 10 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 78 | 101 | 107 | 62 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 40 | 128 | 51 | 129 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 64 | 115 | 92 | 77 | ||||||||||||
| ND4 (size: 1381 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 28 (6.1%)
Alanine (Ala, A)
n = 43 (9.37%)
Serine (Ser, S)
n = 26 (5.66%)
Threonine (Thr, T)
n = 41 (8.93%)
Cysteine (Cys, C)
n = 5 (1.09%)
Valine (Val, V)
n = 19 (4.14%)
Leucine (Leu, L)
n = 87 (18.95%)
Isoleucine (Ile, I)
n = 38 (8.28%)
Methionine (Met, M)
n = 24 (5.23%)
Proline (Pro, P)
n = 28 (6.1%)
Phenylalanine (Phe, F)
n = 17 (3.7%)
Tyrosine (Tyr, Y)
n = 13 (2.83%)
Tryptophan (Trp, W)
n = 20 (4.36%)
Aspartic acid (Asp, D)
n = 4 (0.87%)
Glutamic acid (Glu, E)
n = 12 (2.61%)
Asparagine (Asn, N)
n = 13 (2.83%)
Glutamine (Gln, Q)
n = 9 (1.96%)
Histidine (His, H)
n = 11 (2.4%)
Lysine (Lys, K)
n = 10 (2.18%)
Arginine (Arg, R)
n = 12 (2.61%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 23 | 15 | 14 | 17 | 16 | 29 | 13 | 5 | 2 | 7 | 3 | 6 | 6 | 4 | 7 | 10 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 10 | 1 | 4 | 7 | 20 | 14 | 2 | 3 | 5 | 10 | 10 | 7 | 14 | 4 | 3 | 5 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 18 | 14 | 4 | 3 | 8 | 3 | 4 | 1 | 7 | 3 | 10 | 9 | 7 | 3 | 10 | 2 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 9 | 4 | 8 | 2 | 2 | 8 | 2 | 1 | 2 | 7 | 2 | 0 | 0 | 0 | 0 | 11 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 106 | 135 | 134 | 85 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 73 | 130 | 72 | 185 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 85 | 156 | 131 | 88 | ||||||||||||
| ND4L (size: 297 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 5 (5.1%)
Alanine (Ala, A)
n = 12 (12.24%)
Serine (Ser, S)
n = 6 (6.12%)
Threonine (Thr, T)
n = 10 (10.2%)
Cysteine (Cys, C)
n = 3 (3.06%)
Valine (Val, V)
n = 5 (5.1%)
Leucine (Leu, L)
n = 22 (22.45%)
Isoleucine (Ile, I)
n = 2 (2.04%)
Methionine (Met, M)
n = 5 (5.1%)
Proline (Pro, P)
n = 3 (3.06%)
Phenylalanine (Phe, F)
n = 7 (7.14%)
Tyrosine (Tyr, Y)
n = 0 (0%)
Tryptophan (Trp, W)
n = 1 (1.02%)
Aspartic acid (Asp, D)
n = 0 (0%)
Glutamic acid (Glu, E)
n = 3 (3.06%)
Asparagine (Asn, N)
n = 4 (4.08%)
Glutamine (Gln, Q)
n = 5 (5.1%)
Histidine (His, H)
n = 3 (3.06%)
Lysine (Lys, K)
n = 0 (0%)
Arginine (Arg, R)
n = 2 (2.04%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 1 | 1 | 4 | 2 | 7 | 8 | 1 | 2 | 5 | 0 | 1 | 1 | 2 | 1 | 4 | 3 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 1 | 2 | 1 | 3 | 5 | 2 | 2 | 0 | 4 | 1 | 0 | 0 | 0 | 2 | 1 | 1 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 5 | 3 | 1 | 1 | 3 | 0 | 0 | 1 | 1 | 0 | 0 | 1 | 2 | 2 | 2 | 2 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 1 | 2 | 1 | 0 | 0 | 0 | 0 | 0 | 1 | 1 | 0 | 0 | 0 | 1 | 0 | 0 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 25 | 31 | 23 | 20 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 13 | 29 | 16 | 41 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 11 | 35 | 33 | 20 | ||||||||||||
| ND5 (size: 1836 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 32 (5.24%)
Alanine (Ala, A)
n = 59 (9.66%)
Serine (Ser, S)
n = 43 (7.04%)
Threonine (Thr, T)
n = 60 (9.82%)
Cysteine (Cys, C)
n = 6 (0.98%)
Valine (Val, V)
n = 33 (5.4%)
Leucine (Leu, L)
n = 85 (13.91%)
Isoleucine (Ile, I)
n = 51 (8.35%)
Methionine (Met, M)
n = 31 (5.07%)
Proline (Pro, P)
n = 29 (4.75%)
Phenylalanine (Phe, F)
n = 39 (6.38%)
Tyrosine (Tyr, Y)
n = 12 (1.96%)
Tryptophan (Trp, W)
n = 14 (2.29%)
Aspartic acid (Asp, D)
n = 13 (2.13%)
Glutamic acid (Glu, E)
n = 10 (1.64%)
Asparagine (Asn, N)
n = 30 (4.91%)
Glutamine (Gln, Q)
n = 20 (3.27%)
Histidine (His, H)
n = 14 (2.29%)
Lysine (Lys, K)
n = 20 (3.27%)
Arginine (Arg, R)
n = 10 (1.64%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 28 | 23 | 15 | 14 | 15 | 28 | 16 | 10 | 11 | 9 | 10 | 11 | 7 | 5 | 20 | 19 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 16 | 2 | 4 | 9 | 23 | 20 | 7 | 7 | 9 | 6 | 10 | 8 | 14 | 5 | 2 | 14 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 24 | 12 | 10 | 5 | 10 | 13 | 2 | 4 | 9 | 6 | 6 | 4 | 2 | 10 | 20 | 3 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 11 | 5 | 5 | 5 | 8 | 7 | 13 | 0 | 0 | 8 | 2 | 0 | 0 | 0 | 1 | 10 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 147 | 146 | 205 | 114 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 75 | 178 | 120 | 239 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 104 | 206 | 157 | 145 | ||||||||||||
| ND6 (size: 522 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 21 (12.14%)
Alanine (Ala, A)
n = 22 (12.72%)
Serine (Ser, S)
n = 7 (4.05%)
Threonine (Thr, T)
n = 5 (2.89%)
Cysteine (Cys, C)
n = 4 (2.31%)
Valine (Val, V)
n = 26 (15.03%)
Leucine (Leu, L)
n = 28 (16.18%)
Isoleucine (Ile, I)
n = 2 (1.16%)
Methionine (Met, M)
n = 8 (4.62%)
Proline (Pro, P)
n = 6 (3.47%)
Phenylalanine (Phe, F)
n = 17 (9.83%)
Tyrosine (Tyr, Y)
n = 8 (4.62%)
Tryptophan (Trp, W)
n = 3 (1.73%)
Aspartic acid (Asp, D)
n = 3 (1.73%)
Glutamic acid (Glu, E)
n = 4 (2.31%)
Asparagine (Asn, N)
n = 1 (0.58%)
Glutamine (Gln, Q)
n = 1 (0.58%)
Histidine (His, H)
n = 1 (0.58%)
Lysine (Lys, K)
n = 2 (1.16%)
Arginine (Arg, R)
n = 4 (2.31%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 1 | 1 | 1 | 1 | 1 | 5 | 7 | 10 | 1 | 0 | 6 | 4 | 7 | 9 | 8 | 9 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 7 | 3 | 1 | 8 | 6 | 6 | 2 | 4 | 2 | 1 | 14 | 4 | 2 | 0 | 0 | 0 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 0 | 0 | 5 | 2 | 0 | 0 | 1 | 1 | 3 | 4 | 4 | 0 | 4 | 1 | 0 | 0 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 1 | 1 | 3 | 1 | 2 | 0 | 2 | 0 | 1 | 2 | 1 | 0 | 0 | 0 | 1 | 3 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 76 | 26 | 22 | 50 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 36 | 36 | 21 | 81 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 56 | 37 | 37 | 44 | ||||||||||||
| Total protein-coding genes (size: 11426 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 241 (6.33%)
Alanine (Ala, A)
n = 372 (9.78%)
Serine (Ser, S)
n = 230 (6.04%)
Threonine (Thr, T)
n = 302 (7.94%)
Cysteine (Cys, C)
n = 31 (0.81%)
Valine (Val, V)
n = 253 (6.65%)
Leucine (Leu, L)
n = 611 (16.06%)
Isoleucine (Ile, I)
n = 256 (6.73%)
Methionine (Met, M)
n = 172 (4.52%)
Proline (Pro, P)
n = 219 (5.76%)
Phenylalanine (Phe, F)
n = 239 (6.28%)
Tyrosine (Tyr, Y)
n = 115 (3.02%)
Tryptophan (Trp, W)
n = 118 (3.1%)
Aspartic acid (Asp, D)
n = 73 (1.92%)
Glutamic acid (Glu, E)
n = 96 (2.52%)
Asparagine (Asn, N)
n = 118 (3.1%)
Glutamine (Gln, Q)
n = 98 (2.58%)
Histidine (His, H)
n = 101 (2.65%)
Lysine (Lys, K)
n = 77 (2.02%)
Arginine (Arg, R)
n = 78 (2.05%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 160 | 96 | 69 | 126 | 101 | 189 | 91 | 71 | 60 | 38 | 64 | 62 | 84 | 43 | 99 | 140 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 103 | 11 | 20 | 61 | 150 | 131 | 30 | 32 | 42 | 77 | 90 | 56 | 93 | 46 | 24 | 66 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 120 | 80 | 36 | 40 | 62 | 54 | 19 | 9 | 46 | 38 | 77 | 20 | 33 | 44 | 74 | 19 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 82 | 61 | 35 | 28 | 45 | 47 | 30 | 8 | 10 | 48 | 12 | 0 | 0 | 3 | 3 | 98 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 1035 | 1003 | 980 | 788 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 523 | 1068 | 684 | 1531 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 607 | 1220 | 1118 | 861 | ||||||||||||
>NC_009577.1 Clupea harengus mitochondrion, complete genome GCTAGTGTAGCTTAAACAAAGCATAACCTTGAAGATGTTAAGACGAGCCCTAGGAAAGCTCCACAAGCAC AAAAGTTTGGTCCTGGCTTTAATATCAGCTTTAACCCAATTTACACATGCAAGCCTCCGCAGCCCCGTGA GAATGCCCTCAATCCCCCGTCCGGGGACGAGGAGCCGGTATCAGGCACATAAATTTAGCCCAAGACGCCT TGCTTAGCCACACCCCCAAGGGAATTCAGCAGTGATAAACATTAAAACATAAGTGAAAACTTGACTTAGT CAGGGTTAAGAGGGCCGGTAAAACTCGTGCCAGCCACCGCGGTTATACGAGAGACCCTAGTTGATATATT CGGCGTAAAGAGTGGTTATGGAAAACAAGCACTAAAGCCAAAGAGCCCTCAGGCCGTTATACGCACCCGG GGCCTCGAACCACTATCACGAAAGTAGCTTTACCCTCGCCCACCAGAACCCACGAGAGCTGGGACACAAA CTGGGATTAGATACCCCACTATGCCCCGCCGTAAACTTAGATATATTAGTACAACAAATATCCGCCCGGG AACTACGAGCGCCAGCTTAAAACCCAAAGGACTGGCGGTGCTTCAGACCCCCCTAGAGGAGCCTGTTCTA GAACCGATAACCCCCGTTCAACCTCACCACTCCTTGCCCCTCCCGCCTATATACCACCGTCGCCAGCTTA CCCTGTGAAGGTACTACAGTAAGCAGAATGAGCATTCCTCAGAACGTCAGGTCGAGGTGTAGCGTACGGA GTGGGATAGAAATGGGCTACATTATCTGAAACAGATTATTTACGAAAGGCCGCCTGAAATCAAGCACCCG AAGGTGGATTTAGCAGTAAAAAGGGAATAGAGTGCCCTTTTGAAGTTGGCTCTGAAGCGCGCACATACCG CCCGTCACTCTCCCCAGCGACCACCCAAAAAAGGTAAATAACGCAATAATAACAGCAAGGGGAGGCAAGT CGTAACATGGTAAGTATACCGGAAGGTGTACTTGGAATAATCAGGGCGTGGCTGAGGAGCCAAGCGACCC CCTTACACTGAGTAGACATCCGTGCGAATCGGATCGCCCTGAGCCAAACAGCTAGCTCAAACCACAAGAG CCTAAGTTAATAATATACATAGCTCTACATAAACTAGATTTAATTAAACTAAACCATTCGACCACCCCAG TATGGGCGACAAAAAAGGATAAACGAAGCCATAGATAAAGTACCGCAAGGGAAAGCTGAAAGAGAACTGA AACAACGCACTTAAGCACAGAAAAGCAGAGACTACCTCTCGTACCTTTTGCATCATGATCTAGCCAGTAA ACCCAAGCAAAGAGAACTCTAGTTTGAACCCCCGAAACCAGACGAGCTACTCCGGGACAGCCTATAGTAG GGCCAACCCGTCTCTGTGGCAAAAGAGTGGGAAGATCCCCGAGTAGAGGTGAAAGACCTACCGAGTCCGG TTATAGCTGGTTGCTCAAGAAATGAATACAAGTTCAGCCCCGCTACGCCCCTCGCCACAACAGTTTTACT AAGACTAGGCAAAGGGACACTAACGGAAGTTAGTTGAAGGAGGTACAGCTCCCTCAACAAAGGACACAAC CTTCAACAGGAGGCTAAAGAATAAATTAAAACGAGGCCACAGGTTTCAGTGGGCCTAAAAGCAGCCATCT GAACAGAAAGCGTTAAAGCTCGGACCAGAACAAGCCTATTATAATATTATAACCTCTAATGCCCCTATTA CTACTGAGCCATCCTATGCCTACATAGGAGGGACCATGCTAGAACGAGTAACAAGAAGAATGAACTTCTC CCCGCACAAGTGTAAGTTGGATCGGACCCCCCACCAACAATTAACGAACCCAATAATAGAGGAGCCTACA CCCCCGCCACCCTAGGCCAAGAAGACCACGTATTACCATATCGTTAACCCCACACAGGAGTGCTAGACAA GGGAAAGACTAAAAGGATGAAAAGGAACTCGGCAAACCGAAACCCCGCCTGTTTACCAAAAACACCGCCT CCTGACCACACCACATAGGAGGTCCCGCCTGCCCAGTGACCAAAAGTTTAACGGCCGCGGTATTTTAACC GTGCAAAGGTAGCGCAATCAATTGTCTTTTAAATGAAGACCTGTATGAATGGCATAACGAGGGTTTAACT GTCTCTTTCTCCTGGTCAGTGAAACTGATCTACCCGTGCAGAAGCGGGTATGAATATACAAGACGAGAAG ACCCTATGGAGCTTTAGACGCCCACCAATCACGAAAAGCAGGTCTCGCTCAACAGACTTCCAAACAACGT GATACTGGCACAAACGTCTTCGGTTGGGGCGACCGCGGGAGAGAAAAAAGCTCCCGAGAGGATTGGGGCT ACCCTAAAACCAAGAGCTACACCTCTAAGTCACAAAACATTTGACCAAAAATGATCCGGCTACATGCCGA TTAACGAACCAAGTTACCCTAGGGATAACAGCGCAATCCCTTCCCAGAGTCCATATCGACGAAGGGGTTT ACGACCTCGATGTTGGATCAGGACATCCTAATGGTGCAGCCGCTATTAAGGGTTCGTTTGTTCAACGATT AAAGTCCTACGTGATCTGAGTTCAGACCGGAGTAATCCAGGTCAGTTTCTATCTGTAATAACACCCTTCC CAGTACGAAAGGACCGGAATGGTAAGGCCCATGCTTTAAGGTACGCCTCCCCCTGACCTGATGACTACAA CTAAAGTAGGTAAAAGGTGACAACTCTCAGCCCTAAGAGAAAGGCATACTAAGGTGGCAGAGCTTGGCAA ATGCAGGAAGCCTAAGCCTTCCCTCCCAGAGGTTCAAATCCTCTCCTTAGTTATGCTCCACATTCTTATT ACACACGTCATTAATCCGCTTGCTTACATCGTCCCCGTATTACTAGCAGTTGCTTTCCTGACACTTATCG AGCGAAAAGTGTTAGGGTATATACAGCTGCGGAAGGGCCCCAATGTGGTTGGTCCCTACGGGCTACTGCA GCCAATTGCAGACGGGGTCAAACTGTTTATTAAAGAACCCATTCGACCCTCTACTTCTTCCCCCTTCTTA TTTTTGGCGGCCCCCGCTCTTGCCCTTACCTTAGCGCTAACCCTCTGAGCCCCTATACCCCTCCCTCACC CTGTGACCGACATGAACCTTAGCATACTGTTCATTCTTGCACTCTCTAGCCTTGCAGTCTACTCTATTCT AGGCTCGGGCTGAGCGTCGAATTCCAAATACGCCCTAATTGGTGCACTGCGGGCGGTAGCCCAAACTATT TCTTATGAAGTAGCATTAGGGTTAATTCTACTTTCCACAATTATGTTTACCGGGGGTTTTACTCTGTCCA TGTTTAGCACCACACAGGAAGCTATCTGACTACTAGCACCGGCCTGACCTCTAGCGGCGATGTGATACAC CTCTACTCTGGCGGAGACCAACCGGGCACCCTTTGACCTAACTGAGGGGGAATCAGAGTTGGTCTCGGGT TTTAACGTAGAATATGCTGGGGGACCCTTCGCACTATTCTTCCTTGCGGAATATGCTAATATTCTGTTCA TGAACACGCTCTCGGCCATTTTATTTATGGGTACCTCCTGCTTCCTTATGTTCCCCGAACTAACCACCGC TAATATCATGATGAAGGCTGCTCTACTATCAGCCCTCTTCCTATGGGTCCGAGCCTCCTACCCCCGGTTC CGATATGATCAGTTAATGCACTTAGTGTGAAAAAACTTCCTACCCCTAACACTGGCTCTTATTCTGTGAC ATCTTTCCATGCCAGTCAGTACGGCCGGGCTTCCGCCACAACTCTAGCACCCCGGAGCTGTGCCTGAACG CCTAAGGGCCACTTTGATAGAGTGAGCTAAGAGGGTTAAACTCCCTCCAGCTTCTTAGAAAGAAGGGGCT CGAACCCATCCTCCAGAGATCAAAACTCTGGGTGCTTCCACTACACCACTTTCTAGTAAGGTCAGCTAAG TAAGCTTTCGGGCCCATACCCCGGACATGTTGGTTAAAATCCTTCCCCTACTAATGAGCCCCCTAGTACT CGTTGTCCTTCTATCTAGCCTAGGCCTGGGAACCGCAATGACTTTTGCGAGCTCGCACTGACTCCTAGCA TGAATAGGCCTAGAAATTAATACCCTGGCCATCCTCCCTTTAATAGCACAGCAGAACCACCCCCGGGCCA TGGAGGCCACAACCAAATACTTCCTTATCCAGGCCACAGCGGCAGCCATAATTCTGTTTGCTAGCACCAC CAATGCATGAGCCTCTGGGCAATGAGATATCACCTACCCCTCCCACCCAGTGACCGCCACCATTACTATG GCAGCCTTGGCCATAAAGATTGGGCTAGCCCCAACACACTTCTGACTTCCAGAAGTTCTTCAAGGGGTCT CCCTTACCACCGGGCTGATTCTATCCACTTGACAAAAACTGGCCCCTTTTGCACTTATTCTTCAAGTAGC AAACTATACCCCTCCCTACATGTTAACGGCCCTGGCCCTCTGCTCGACCCTTGTTGGGGGGTGAGGAGGA CTTAATCAGACACAGCTACGTAAGATCTTAGCATACTCATCAATCGCACACTTGGGGTGAATGATTCTAG TCGCTCAAATAGCACCCCAGCTGACGCTAATTGCTTTAATCACATATATTGTTATGACAACGGCAGCATT CCTCACTCTTAACAACATGGATGCCACTAAAACTGCCACCTTAGCCTCCTCTTGAACTAAGTCCCCCACT CTGACCGCAATAGCCTGCTTGGTCCTTCTCTCTCTCGGGGGCCTCCCCCCGCTAACAGGGTTTTTACCTA AGTGGCTTATTCTCCAAGAGGTAACTAACCAGGGATTTATTCCAACGGCAACTGTTATGGCCCTATCTGC ACTGCTAAGCTTATACTTCTACCTGCGACTCACCTACGCTATGTCCCTCACGCTCTTTCCCCACACTTTT AATTCTGTAACCCCTTGACGTATAACGGCCAAACGTCCAACCCTGCTCCTATCCACAACCATTATTATAA CCACGTGTCTCCTACCTCTCACCCCCTCTGCCCTGACCCTGCTGATCTAGGGGCTTAGGATAGCATTTAG ACCATGAGCCTTCAAAGCTCCAAGCAGGAGTGAGAATCTCCTAGCCCCTGATAAGGCCTGCGGGACTTTA CCCCACAGCTTCTGGATGCAACCCAGACGCTTTAATTAAGCTAAGGCCTTTCTAGATGGGAAGGCCTCGA TCCTACAAACTCTTAGTTAACAGCTAAGCGCTCTAACCAGCGAGCATCCATCTACCTTTCCCCGCCGCCT CTAAAAAGGCGGGGAAAGCCCCGGCAGGCGCTAGCCTACGTCTTCAGGTTTGCAACCTGACATGAACTTC ACCACAGAGCTTGGTAAGGAGAGGAGTTAAACCTCTGTTATCGGGGCTACAATCCGCCGCCTAAGCCTTC GGCCACCCTACCTGTGGCAATTACACGTTGATTTTTCTCAACTAATCACAAAGATATTGGTACCCTTTAC CTAGTATTTGGTGCCTGAGCAGGAATGGTGGGCACAGCCCTAAGTCTCCTAATCCGTGCAGAACTTAGCC AACCTGGGGCTCTCCTTGGAGACGACCAGATCTATAATGTTATTGTTACTGCACATGCCTTCGTAATAAT TTTCTTTATAGTAATGCCGATTCTAATTGGAGGGTTTGGAAACTGACTAATTCCTCTTATGATCGGAGCG CCAGATATGGCATTCCCTCGAATAAACAATATGAGCTTCTGACTACTTCCCCCCTCATTCCTCCTACTAC TAGCCTCCTCCGGAGTTGAAGCCGGGGCGGGGACCGGGTGAACGGTATATCCTCCTCTGTCAGGAAATCT GGCCCATGCAGGAGCATCAGTTGACCTAACCATTTTTTCACTTCATCTAGCAGGTATTTCCTCTATTCTA GGGGCCATTAATTTCATTACCACAATTATTAATATGAAACCACCCGCAATCTCACAATACCAAACGCCTC TGTTTGTCTGATCCGTTCTTGTTACAGCTGTTCTACTTCTTCTATCGCTGCCTGTGCTAGCTGCCGGAAT TACAATGCTTCTTACAGATCGAAACCTAAACACCACCTTCTTCGACCCAGCAGGAGGGGGAGACCCAATT CTTTACCAACACCTATTCTGATTTTTCGGACACCCGGAAGTATATATTCTAATTCTTCCCGGGTTCGGAA TGATTTCCCACATCGTAGCCTACTACGCGGGAAAGAAAGAACCCTTCGGATACATAGGAATGGTCTGAGC TATGATGGCCATCGGACTACTAGGGTTTATTGTATGAGCCCACCACATGTTCACCGTAGGAATGGATGTT GACACTCGAGCATACTTTACATCAGCAACCATAATTATTGCCATCCCAACCGGGGTTAAGGTATTTAGCT GACTTGCCACTCTCCACGGGGGCTCAATCAAATGGGAAACCCCACTTCTATGAGCCCTTGGGTTTATTTT CCTTTTCACAGTCGGGGGTCTAACAGGGATTGTCCTAGCCAATTCTTCATTAGATATCGTACTACACGAC ACATACTACGTTGTAGCACACTTCCACTACGTTCTCTCCATGGGGGCCGTATTCGCCATTATGGCTGCAT TTGTACACTGATTCCCCCTATTTACAGGATACACCCTCCACAGCACCTGAACAAAAATCCACTTCGGAAT CATGTTCGTAGGTGTCAACCTAACTTTCTTCCCCCAACATTTCCTAGGCCTAGCAGGAATGCCACGGCGA TACTCTGACTACCCCGACGCCTATACTCTTTGAAATACTGTGTCCTCAATCGGGTCACTAATTTCACTGG TAGCAGTAATTATGTTCTTGTTCATCCTTTGAGAAGCATTCGCTGCCAAACGAGAAGTATCGTCCGTGGA ATTAACTATGACGAACGTTGAGTGACTACACGGATGCCCTCCTCCCTACCACACCTTTGAGGAGCCAGCC TTCGTGCAAGTGCAAGCAAAATAACGAGAAAGGGAGGAATCGAACCCCCATAAGATGGTTTCAAGCCAAC TGCATGGCCAATCTGCCACTTTCTTAAATAAGACACTAGTAAAATACATTACCTTGCCTTGTCAAGGCAA AATTGTGGGCTAATTCCCCGCGTGTCTTGGTCCAGAGCTAAATGGCACATCCCTCACAACTAGGATTGCA AGACGCGGCCTCCCCTGTTATAGAAGAACTCCTACATTTCCACGACCACGCACTAATGATTGTCCTCTTG ATTAGCACACTGGTCCTTTACATTATTGTGTCAATGGTCTCTACAAAACTTACTAATAAATATATTCTAG ATTCCCAAGAAATTGAGATTGTATGAACTATTCTCCCAGCAGTTATTCTAATTTTAATCGCACTCCCATC TCTGCGAATTCTATACCTTATAGACGAAATTAACGACCCGCACCTTACGATCAAAGCCATGGGACACCAA TGGTACTGAAGCTACGAATATACAGACTATGAAGATCTCGGATTTGATTCTTACATGGTCCCCACCCAAG ACCTAGTACCGGGACAGTTCCGACTCCTAGAGACAGACCACCGAATAGTAGTACCAATAGAGTCCCCGAT CCGAGTTCTCGTATCAGCTGAAGATGTATTGCACTCTTGAGCGGTCCCTGCCTTAGGGGTAAAAATAGAC GCCGTTCCCGGGCGCTTAAACCAAACAGCTTTCATTGTCTCCCGCCCTGGTGTATTCTATGGACAATGTT CTGAAATCTGCGGGGCAAACCACAGCTTCATGCCAATCGTCGTGGAAGCCGTACCTCTTGTACACTTCGA AAACTGATCCTCACTTATACTTGAAGACGCCTCACTAAGATGCTAAATTGGGCCTGAGCGTCAGCCTTTT AAGCTGAAAATTGGTGGCCCCCAACCACCCTTAGTGACATGCCTCAATTAAACCCCGCCCCTTGATTCGC AATTCTTGTTTTCTCTTGAGTAGTCTTCCTGACTATTATCCCCCAAAAAATCTTAGCCCACAATTTCAAT AATGAGCCCACTACTATGGGGGCCGAAAAAGCCAAACCTGAACCCTGAAACTGACCATGATACTAAGCTT CTTTGACCAATTTATAAGCCCCACCTACCTGGGAATCCCCCTTATTGCACTGGCACTCGTACTTCCATGA ACTCTATACCCCACCCCTACCCCACGATGACTAAACAGCCGACTTCTAACTCTTCAAGGCTGATTTATCA ACCGCTTTACCCAGCAAATCTTCATGCCTATTAATCCGGGGGGACACAAATGAGCAGTTATACTTGCATC ATTAATGGTTTTCTTAACTTCACTTAATATGCTAGGCCTTCTCCCCTACACCTTTACACCCACAACCCAA CTCTCATTAAACATGGGTCTTGCAGTTCCCCTATGACTTGCCACAGTAATTATTGGCATGCGAAATCAGC CAACTGCAGCTCTCGGTCACCTTCTGCCGGAGGGGACACCCGTTCTTCTCATTCCAGTGCTTATTATTAT TGAAACTATTAGCTTGTTTATCCGCCCCCTAGCACTTGGGGTTCGACTGACCGCCAATCTAACAGCAGGC CACTTACTTATTCAACTAATTGCCACAGCTGCATTCGTCCTACTTCCTCTAATGCCAACTGTAGCCATCT TGACAGCCACTGTCCTATTCCTCCTCACCTTACTAGAAGTCGCCGTAGCAATGATCCAGGCGTATGTCTT TGTTCTTCTCCTAAGCCTCTACCTACAAGAAAAACGTCTAAATGGCCCACCAAGCACACGCATACCACAT GGTAGACCCAAGCCCCTGACCACTAACCGGAGCAGTTGGAGCCCTACTCCTGACGTCCGGCACCGCAATC TGATTCCACTTCCACTCAATTACCCTAATAACTCTAGGAACCGTTCTAACACTTCTCACCATGTACCAGT GATGGCGAGATATTGTACGAGAAGGGACATTCCAAGGTCACCACACCCCTCCTGTACAAAAAGGACTGCG CTATGGTATGATCTTATTCATTACATCCGAAGTATTCTTCTTTGCCGGATTCTTCTGAGCATTTTATCAC TCGAGCTTGGCACCCACCCCTGAACTAGGGGGATGCTGACCCCCCACAGGCATTACCGCCCTTGATCCAT TCGAGGTCCCTCTTTTAAACACAGCAGTACTCCTAGCCTCCGGAGTAACCGTCACCTGAGCCCACCACAG CCTAATAGAAGGAGAACGGAAACAGGCAATTCAGTCCCTTGCTTTGACCATCTTACTTGGGTTCTACTTT ACCTTCCTACAGGCCCTGGAATACTATGAAGCCCCCTTTACTATTGCAGATGGTGTTTATGGCTCAACTT TCTTTGTAGCCACAGGATTCCACGGCCTACATGTTATCATCGGCTCTTCATTCCTGGCAGTCTGTTTTGT ACGCCAAGTACTTTACCATTTTACCTCGGCCCACCACTTTGGGTTTGAGGCAGCCGCCTGATACTGACAC TTCGTTGACGTAGTATGATTATTCCTATACGTCTCTATCTACTGATGAGGATCATAACCTTTCTAGTACA AAAGACAGTACAGGTGGCTTCCAACCATCTAATCTTGGTTAAAGTCCAAGGAAAGGTAATGAGCCTAATC ATAGTAGTTTTGGCAATTACACTTATCCTCTCCATTATCTTGGTGATTGTGTCATTTTGACTCCCTCAGA TAACCCCGGACGCAGAAAAATTATCCCCCTATGAGTGCGGTTTTGACCCCCGAGGATCTGCCCGTATGCC CTTCTCCTTGCGATTCTTTCTAGTAGCAATCTTATTTCTGTTGTTTGACCTGGAAATTGCCCTACTACTT CCCCTCCCCTGAGCCTACCAACTAGACAACCCAGTGATGACCGTCGTGTGAGCCGGCGCTGTACTCGCCC TTCTAACACTGGGCCTAGTTTATGAATGACTTCAAGGAGGCCTTGAATGAGCCGAATAGGGAGTTAGTCC AACTGAAGACTTCTGGTTTCGGCCCAGAAAATTGTGGTTAAAATCCATAGCACCCTTATGACCCCGGTAC AATTCAGTTTTACCACGGCATTCATCCTAGGCCTAATAGGCCTAACATTTCACCGAACCCATCTCCTCTC TGCCCTACTCTGTCTAGAGGGCATAATACTAGCACTCTTTGTTGCTTTGTCCCTCTGGACTCTTCAAACA GAAGTGACCAATTTTTCCGCGGCCCCAATATTATTGCTAGCCTTCTCCGCTTGTGAAGCTAGCGTCGGAT TAGCCCTCCTCGTAGCGACAAACCGCACCCATGGCCCAAACCAACTGCAAGCCCTTAATATTCTACAATG CTAAAAGTCCTCATCCCCACCTTAATATTGTTTCCGACCACATGGCTAGCCCCTAAAAAGTGACTATGGG CCACTACAACGTCCCACAGCCTTATTATTGCCCTAATTAGCCTTACCTGACTTAACTGAACAGCAGAAAC AGGGTGGACCCTACCTAACAGCTACATAGCAATTGATCCCCTGTCTGCCCCCTTGCTTGTCCTGGCCTGC TGACTTCTCCCCTTAATGATTCTTGCTAGCCAAAACCACACTCGGACTGAGCCCATCTCCCGCCAGCGAA CATTCATTTGCCTCCTAATCTCCCTCCAGGCCTTTCTAATCCTAGCATTCGGGGCCACAGAGATCCTCAT ATTTTATGTGATATTTGAGGCCACCCTGGTCCCTACACTAATTATTATTACCCGATGGGGAAATCAGGCA GAACGTCTAAACGCAGGAACCTACTTCCTTTTCTACACCCTAGCAGGATCACTACCACTACTGGTTGCCC TTCTAGCACTTCAGAACTCGACAGGGAGCTTGTCGATGATTATCCTGAATTTTAATCCACCCCTGGCCCT AGCATCTTGAGGTGATATGATATGGTGGGCAGCCTGCCTGATCGCCTTCCTAGTGAAAATGCCTCTATAC GGCGTACACTTATGACTTCCTAAAGCCCATGTAGAAGCCCCAATTGCCGGGTCGATGGTACTGGCTGCTG TGCTATTGAAACTAGGGGGCTACGGAATAATTCGAATATCCACAATTCTTGACCCGATTACTAAGGAAGC GGCCTACCCCTTTATTGTCCTGGCCCTATGGGGTATTATTATAACAGGATCAATCTGTCTCCGCCAGACA GACCTAAAATCACTGATCGCTTACTCTTCGGTTAGTCATATGGGCTTAGTAGCAGGGGGCATTCTTATCC AGACCCCCTGGGGACTCACGGGTGCACTTATTCTTATAATTGCCCACGGACTCGTATCCTCCGCCCTATT CTGCCTGGCAAACACCAGCTATGAGCGAACCCACAGCCGAACTATGGCCCTAGCACGAGGAATACAAATG CTATTCCCCCTAACCGCTACGTGATGATTTGTTGCTAACCTGGCTAACTTAGCATTGCCCCCCCTCCCAA ACCTAATAGGGGAGGTAATAATTATTACGACCATATTCAACTGGTCCCCTTGAACACTCATCCTGACCGG GTTGGGAACATTGATTACAGCGGGGTACTCCCTCTACATGTTCCTAATAACCCAGCGAGGCCCGGTGCCC GAGCACATCAAAGGACTTACCCCCTACCACACCCGGGAGCACCTACTCATCACCCTCCACCTCCTTCCCG TCATCCTCCTCGTCCTTAAACCTGAGCTAATCTGAGGGTGATTCTATTGCAGATCTAGTTTAACGAAAAC GCTGGATTGTGATTCCAGAAACAGGGGTTAAAATCCCCTGACCCGCCGAGAGAGACTTGTAGCGACAGAG ACTGCTAATCCCTGCCCCCGCAGTTAGATTCTGCGGCTCACTCGGCCTTTGAAGAATAACAGCTATCCGT TGGTCTTAGGAACCAAAAACTCTTGGTGCAAATCCAAGCAAGGGCTATGCAGACCACGCTAATACTTACA TCATCACTTGTACTGATCTTTGCCCTCCTAGCATACCCTATTATCACAACGATTAACCCTGCACCCAAGA ACCCAGATTGAGCCGTCACCCACGTCAAGACCGCAGTTAGTACTGCATTTGTGGTGAGCCTGCTACCAAT ATTTATTTTCTTAGACCAGGGAGTAGAGACTATTATTACGACCTGACACTGAATAAATACCTCAACCTTT AATATCAGCATCAGCCTGAAGTTTGATTATTACTCTATTATGTTTACCCCTATCGCCCTTTACGTAACCT GATCGATTCTAGAGTTTGCCTCATGATATATACATGCGGACCCCTACATGAACCGATTCTTTAAGTATCT TCTGATGTTTCTCATCGCTATGGTCATCCTAGTCACCGCTAACAACATGTTTCAATTATTTATTGGTTGA GAGGGTGTTGGAATCATGTCCTTTCTACTAATTGGGTGATGGTACGGCCGAGCTGATGCCAACACCGCGG CCCTCCAGGCTGTTATTTATAACCGGGTGGGTGATATCGGACTAATCATAAGCATGGCTTGGTTCGCAAT AAACCTAAACTCCTGAGAAATACAGCAAATTTTCTCTTTATCACACAACATAGACATAACACTTCCCCTA TTTGGGCTAATTATCGCCGCAACAGGGAAGTCGGCACAATTCGGACTACACCCCTGGCTCCCCTCCGCAA TGGAGGGGCCCACACCAGTATCTGCCCTGTTACACTCAAGTACAATAGTCGTAGCCGGGATTTTCCTCCT CATCCGACTTCACCCCCTCACTCAGTCAAACCAGACGGCATTAACCACCTGCCTTTGTCTGGGTGCACTA ACTACCCTATTTACGGCGACATGCGCTCTTACCCAGAACGACATCAAGAAAATTGTAGCATTCTCTACTT CAAGCCAACTAGGCCTGATAATGGTCACTATTGGCCTAAACCAACCCCAACTGGCATTTCTGCACATCTG CACCCATGCATTTTTTAAAGCAATACTCTTCCTGTGCTCCGGCTCCATTATTCACAGCCTAAATGACGAA CAAGACATTCGAAAGATGGGGGGACTACACAACCTCGCACCCTTTACCTCTACTTGTCTAACTATCGGCA GCCTGGCCCTCACAGGGACCCCCTTCTTAGCGGGCTTCTTCTCCAAAGATGCAATCATTGAAGCCCTTAA TAACTCCTACCTAAACGCCTGAGCCCTGATCCTTACGCTAATCGCGACTTCCTTTACTGCCGTTTATAGC TTCCGAGTTGTCTTCTTCGTCGCCATGGGGACACCCCGATTCCTACCTCTATCACCCATCAACGAGAACG ACCCGGCAGTAATTAACCCAATCAAGCGACTCGCCTGGGGGAGTATCGTGGCGGGTTTAATCCTCACCTC AAATACTATTCCAACGAAGACCCCTATTATAACCATGCCGCCCCTCCTAAAACTGGCTGCCCTTGTCGTC ACGATTATTGGCCTTTTAACGGCCATTGAACTAGCTACACTTACCTCAAAACAATTTAAAACTACCCCTA ATATTAAGCTCCATAATTTCTCAAATATACTAGGTCACTTCCCTGCAACGGTTCACCGGGCGGCCCCTAA GATAAACCTAGTTTTAGGACAAACAATGGCCAATCAACTGGTTGACCAGTCCTGATTCGAAGGCTCCGGG CCCAAGGGCCTGGCCTCAATCCAAATGAAGATGGCCACTGTTACAAGTAATGCCCAGCGAGGTATTATTA AAACCTATCTATTGGTGTTCCTGGTTACCTTAACTTTGGCAGTCCTCCTTGCTGCAAGCTAGACAGCCCG CAGGGGCCCTCGGCTCAGCCCTCGCACGAGCTCCAGTACCACAAACAGCGTTAGTAGTAATACTCAAGCG CAAAACACTAACATGAAACCACCCGATCCGTACATTGCAACCACACCCCCCATGTCGGCGCGGATCGTAA AGAACTTGCTACAGCTATCTACTATCCCGACAAATAGCGTGTATCAGTGCTTACCGAAGTATAGCCCTGC AGCAACCACCCCTAATAAATAGAAGGCAAGTTGCTCAAATACCGTCACTTCCGTTCAGCCCTCGGGGAAA GGGTCGGCTGCTAAAGCAGAAGAATAAGCGAATACGACCAGCATCCCCCCCAAATAAATCAAGAATAAAA CTAAAGCCAAGAAAGGCGCCCCACTCACTGCCAAAACGGCACAGCCCATCCCCGCAGCAACTACCAGCCC GAAGGCTGCAAAGTAAGGAGCAGGATTACATGCCACCCCCACCAGCCCTAGGACTAACCCAACTAATAAC ATAAAGGCAAAATATACCATAATTTCCACCCGGACTCTAACCGGAACTAATGACTCGAAAAACCACCGTT GTCATTCAACTATAGAAACCCTAATGGCAAGCCTACGAAAAACCCACCCCCTTCTGAAGATTGCTAACGG CGCACTAGTGGACCTCCCGGCTCCCTCCAATATTTCAGTATGATGAAACTTTGGGTCCCTGCTCGGATTA TGCCTAGCGGCACAAATCTTAACAGGACTGTTTTTAGCTATACACTACACTTCCGACATCGCAACCGCAT TCTCCTCTGTAATACACATTTGCCGAGATGTAAACTATGGGTGATTAATCCGAAACATACACGCAAACGG AGCATCATTCTTCTTCATCTGCATTTATGCACATATCGCCCGAGGACTATACTACGGATCATACCTTTAC AAGGAAACATGAACCATCGGGGTCGTCCTTCTCCTTCTAGTTATGATGACTGCCTTTGTAGGATACGTCC TACCATGGGGGCAAATGTCATTCTGAGGGGCCACTGTCATTACTAACCTAATATCGGCCGTTCCCTATGT AGGTAACGCACTAGTTCAATGAATTTGAGGGGGGTTTTCTGTAGACAACGCTACTTTAACCCGATTCTTC GCCTTCCATTTCCTATTCCCATTTGTGATTGCAGGGGCTACTATTCTCCACCTTCTGTTCCTCCACGAAA CGGGGTCAAACAACCCGGCAGGACTTAACTCAGACTCTGATAAAATCTCCTTCCACCCGTACTTCTCTTA CAAAGATGCCCTGGGGTTTGCAGTCATACTATTAGCTCTCACATCCCTGGCCCTCTTCGCCCCCAACCTC CTTGGAGATCCGGACAACTTCACGCCAGCCAACCCGCTGGTTACTCCCCCTCATATTAAGCCAGAGTGAT ACTTCCTCTTTGCATACGCCATTCTTCGATCAATTCCGAACAAGTTGGGAGGGGTGCTTGCTCTCCTATT CTCGATTCTGGTCCTTCTGCTTGTTCCTATTCTACACACCTCCAAGCAACGAGGACTAACATTCCGACCT ATAACACAGTTTTTATTCTGAGCCCTAGCCGCAGATGTAATTATCTTAACATGAATTGGAGGAATGCCAG TAGAACACCCCTTTGTTATTATCGGACAAGTTGCATCAGTCGTGTACTTCTCATTATTCTTATTCCTTTC ACCCCTCGCAGGGCTGGTGGAAAATAAAGCTCTAAGCTGAAATTGCCCCAATAGCTTAATTCGAAGCGCC GGTTTTGTAATCCGGAGATCGGAGGTTAAAATCCCCCTTGAGGCTCAGAGAAGAAAGATTCTAACTTCCA CCCCTAACTCCCAAAGCTAGGATTCTGAATTTAACTATTCTCTGATTATAATTCGTACCCGCCGCCCGAG TTTGAAGCGGAGGACAGGACCGCCCTTAGTATGTAAACCTTTGAGTTATGTCTTTTCATAACTGCAATAT CACACGGTTTAGTACACGAGCATGCCTATGTACAGTGTTACATTTTAGCACCCATCCCCATATGTATAGT AACATACATATGGGGCTATAGTACACGTATATATTATTATACATGTACCTATGTATTAATACATATGTGT TTAACTATACATATACCTATGGTATTAATACATCTATGTATTAACACCATACGCTAAAATTACCCTATCA GGAAATTGATTAAGTGAAGAAATACATCGACATAATTATAAATCCGAGCCCATTATTAAGATCACCTGAT AAATAGAATAATCCCCATAACTTCTTTAAACCAGTTTCCATGCGTTACTCAATATTAATCGGTAACTCAA ACGATTACCCAATAAGAACCGACCAACCAAATTGAGTTAAGGCATATCATGAATGATAAGGGTCAGGGAC ACAAATCGTGGGGGTTACACAGAATGAATTATTACTGGCATCTGGTTCCTATTTCAGGGCCACACAGTCC TTTTCCCTCCCCTGGTGAACTATATCTTACATAGGTTAATGGTAGTGTACTAATGGTTCTTTACCCACCA TGCCGAGCGTTCACTTAAATGCATTTGGTATTTTTTTCTGGGGTCACTTTCACTTTGCATTTGACGAGTC CTTCCTATTGTTAACTAATAAGGGAGCACATTTCCTTGCTTGAACGTAATATAGCTTCAATACTTCATCA ACATTGATAGAAGAGTTGCATAAACTTATCTAGTGCATAAGGTATCAATCTTAACTCCAAATACTCCTAC TGTAGTGTCCCCCCCTGGCTTTTAAAAGATTTTTTCGCGCGACAAACCCCCCTACCCCCCTACGCTGGTC GAATCTTATTATTTCTGTCAAACCCCAAAAGCAGAGAAGGCTCGACTAGCGTATTCAACGAGTTTCGGTG TGTGTTGTGTATACAGTGTCACAAAAAAGCGTTATTATATA
Contact: Vadim E. Fraifeld, MD, PhD
Head: Lab for the Biology of Aging, The Shraga Segal Department of Microbiology, Immunology and Genetics, Faculty of Health Sciences, Ben-Gurion University of the Negev
P.O. Box 653, Beer-Sheva 8410501, Israel
Email:
Head: Lab for the Biology of Aging, The Shraga Segal Department of Microbiology, Immunology and Genetics, Faculty of Health Sciences, Ben-Gurion University of the Negev
P.O. Box 653, Beer-Sheva 8410501, Israel
Email:
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If you would like to cite this database please use:
Toren D, Barzilay T, Tacutu R, Lehmann G, Muradian KK, Fraifeld VE. MitoAge: a database for comparative analysis of mitochondrial DNA, with a special focus on animal longevity. Nucleic Acids Res. 2016; 44(D1):D1262-5.
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