Viewing data for Cynomys ludovicianus
| Scientific name | Cynomys ludovicianus |
| Common name | Black-tailed prairie dog |
| Maximum lifespan | 11.00 years (Cynomys ludovicianus@AnAge) |
| Total mtDNA (size: 16466 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 6154 | 10312 | 4007 | 2147 | 5055 | 5257 |
| Base content per 1 kb (bases) | 374 | 626 | 243 | 130 | 307 | 319 |
| Base content (%) | 37.4% | 62.6% | ||||
| Total protein-coding genes (size: 11333 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 4270 | 7063 | 2910 | 1360 | 3595 | 3468 |
| Base content per 1 kb (bases) | 377 | 623 | 257 | 120 | 317 | 306 |
| Base content (%) | 37.7% | 62.3% | ||||
| D-loop (size: 1014 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 387 | 627 | 260 | 127 | 314 | 313 |
| Base content per 1 kb (bases) | 382 | 618 | 256 | 125 | 310 | 309 |
| Base content (%) | 38.2% | 61.8% | ||||
| Total tRNA-coding genes (size: 1510 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 537 | 973 | 308 | 229 | 455 | 518 |
| Base content per 1 kb (bases) | 356 | 644 | 204 | 152 | 301 | 343 |
| Base content (%) | 35.6% | 64.4% | ||||
| Total rRNA-coding genes (size: 2533 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 928 | 1605 | 510 | 418 | 674 | 931 |
| Base content per 1 kb (bases) | 366 | 634 | 201 | 165 | 266 | 368 |
| Base content (%) | 36.6% | 63.4% | ||||
| 12S rRNA gene (size: 966 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 370 | 596 | 207 | 163 | 245 | 351 |
| Base content per 1 kb (bases) | 383 | 617 | 214 | 169 | 254 | 363 |
| Base content (%) | 38.3% | 61.7% | ||||
| 16S rRNA gene (size: 1567 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 558 | 1009 | 303 | 255 | 429 | 580 |
| Base content per 1 kb (bases) | 356 | 644 | 193 | 163 | 274 | 370 |
| Base content (%) | 35.6% | 64.4% | ||||
| ATP6 (size: 684 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 252 | 432 | 173 | 79 | 228 | 204 |
| Base content per 1 kb (bases) | 368 | 632 | 253 | 115 | 333 | 298 |
| Base content (%) | 36.8% | 63.2% | ||||
| ATP8 (size: 204 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 66 | 138 | 53 | 13 | 66 | 72 |
| Base content per 1 kb (bases) | 324 | 676 | 260 | 64 | 324 | 353 |
| Base content (%) | 32.4% | 67.6% | ||||
| COX1 (size: 1542 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 608 | 934 | 352 | 256 | 514 | 420 |
| Base content per 1 kb (bases) | 394 | 606 | 228 | 166 | 333 | 272 |
| Base content (%) | 39.4% | 60.6% | ||||
| COX2 (size: 684 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 261 | 423 | 168 | 93 | 205 | 218 |
| Base content per 1 kb (bases) | 382 | 618 | 246 | 136 | 300 | 319 |
| Base content (%) | 38.2% | 61.8% | ||||
| COX3 (size: 784 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 326 | 458 | 205 | 121 | 248 | 210 |
| Base content per 1 kb (bases) | 416 | 584 | 261 | 154 | 316 | 268 |
| Base content (%) | 41.6% | 58.4% | ||||
| CYTB (size: 1140 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 461 | 679 | 313 | 148 | 358 | 321 |
| Base content per 1 kb (bases) | 404 | 596 | 275 | 130 | 314 | 282 |
| Base content (%) | 40.4% | 59.6% | ||||
| ND1 (size: 956 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 371 | 585 | 258 | 113 | 294 | 291 |
| Base content per 1 kb (bases) | 388 | 612 | 270 | 118 | 308 | 304 |
| Base content (%) | 38.8% | 61.2% | ||||
| ND2 (size: 1042 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 372 | 670 | 277 | 95 | 314 | 356 |
| Base content per 1 kb (bases) | 357 | 643 | 266 | 91 | 301 | 342 |
| Base content (%) | 35.7% | 64.3% | ||||
| ND3 (size: 347 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 125 | 222 | 80 | 45 | 127 | 95 |
| Base content per 1 kb (bases) | 360 | 640 | 231 | 130 | 366 | 274 |
| Base content (%) | 36.0% | 64.0% | ||||
| ND4 (size: 1378 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 478 | 900 | 338 | 140 | 466 | 434 |
| Base content per 1 kb (bases) | 347 | 653 | 245 | 102 | 338 | 315 |
| Base content (%) | 34.7% | 65.3% | ||||
| ND4L (size: 297 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 108 | 189 | 77 | 31 | 103 | 86 |
| Base content per 1 kb (bases) | 364 | 636 | 259 | 104 | 347 | 290 |
| Base content (%) | 36.4% | 63.6% | ||||
| ND5 (size: 1818 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 675 | 1143 | 479 | 196 | 573 | 570 |
| Base content per 1 kb (bases) | 371 | 629 | 263 | 108 | 315 | 314 |
| Base content (%) | 37.1% | 62.9% | ||||
| ND6 (size: 525 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 190 | 335 | 154 | 36 | 122 | 213 |
| Base content per 1 kb (bases) | 362 | 638 | 293 | 69 | 232 | 406 |
| Base content (%) | 36.2% | 63.8% | ||||
| ATP6 (size: 684 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
Amino acid frequencies:
Glycine (Gly, G)
n = 11 (4.85%) 
Alanine (Ala, A)
n = 16 (7.05%) 
Serine (Ser, S)
n = 14 (6.17%) 
Threonine (Thr, T)
n = 21 (9.25%) 
Cysteine (Cys, C)
n = 0 (0%) 
Valine (Val, V)
n = 10 (4.41%) 
Leucine (Leu, L)
n = 43 (18.94%) 
Isoleucine (Ile, I)
n = 24 (10.57%) 
Methionine (Met, M)
n = 15 (6.61%) 
Proline (Pro, P)
n = 16 (7.05%) 
Phenylalanine (Phe, F)
n = 14 (6.17%) 
Tyrosine (Tyr, Y)
n = 2 (0.88%) 
Tryptophan (Trp, W)
n = 3 (1.32%) 
Aspartic acid (Asp, D)
n = 1 (0.44%) 
Glutamic acid (Glu, E)
n = 3 (1.32%) 
Asparagine (Asn, N)
n = 9 (3.96%) 
Glutamine (Gln, Q)
n = 8 (3.52%) 
Histidine (His, H)
n = 7 (3.08%) 
Lysine (Lys, K)
n = 4 (1.76%) 
Arginine (Arg, R)
n = 6 (2.64%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 14 | 10 | 9 | 12 | 3 | 14 | 1 | 12 | 8 | 0 | 1 | 2 | 6 | 1 | 10 | 4 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 6 | 0 | 0 | 6 | 3 | 7 | 0 | 1 | 3 | 7 | 0 | 9 | 3 | 4 | 0 | 5 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 6 | 8 | 2 | 2 | 2 | 6 | 0 | 1 | 3 | 2 | 0 | 1 | 1 | 7 | 2 | 5 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 2 | 2 | 1 | 1 | 0 | 3 | 1 | 3 | 0 | 3 | 0 | 0 | 0 | 1 | 0 | 2 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 41 | 67 | 77 | 43 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 24 | 63 | 35 | 106 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 14 | 43 | 92 | 79 | ||||||||||||
| ATP8 (size: 204 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: MPQLDTSTWFTTILSMILALFFMFQLKISNHFYPSNPSPKDTKLTEHKTPWEEKWTKIYLPLSLPLH* | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 0 (0%)
Alanine (Ala, A)
n = 1 (1.49%)
Serine (Ser, S)
n = 6 (8.96%)
Threonine (Thr, T)
n = 8 (11.94%)
Cysteine (Cys, C)
n = 0 (0%)
Valine (Val, V)
n = 0 (0%)
Leucine (Leu, L)
n = 10 (14.93%)
Isoleucine (Ile, I)
n = 4 (5.97%)
Methionine (Met, M)
n = 3 (4.48%)
Proline (Pro, P)
n = 7 (10.45%)
Phenylalanine (Phe, F)
n = 5 (7.46%)
Tyrosine (Tyr, Y)
n = 2 (2.99%)
Tryptophan (Trp, W)
n = 3 (4.48%)
Aspartic acid (Asp, D)
n = 2 (2.99%)
Glutamic acid (Glu, E)
n = 3 (4.48%)
Asparagine (Asn, N)
n = 2 (2.99%)
Glutamine (Gln, Q)
n = 2 (2.99%)
Histidine (His, H)
n = 3 (4.48%)
Lysine (Lys, K)
n = 6 (8.96%)
Arginine (Arg, R)
n = 0 (0%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 2 | 2 | 2 | 4 | 0 | 4 | 0 | 1 | 2 | 0 | 0 | 0 | 0 | 0 | 4 | 1 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 1 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 4 | 2 | 0 | 1 | 3 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 1 | 3 | 1 | 2 | 1 | 3 | 0 | 0 | 0 | 1 | 1 | 0 | 1 | 2 | 0 | 2 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 1 | 3 | 0 | 0 | 2 | 6 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 3 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 6 | 20 | 23 | 19 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 3 | 22 | 21 | 22 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 4 | 11 | 28 | 25 | ||||||||||||
| COX1 (size: 1542 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 47 (9.16%)
Alanine (Ala, A)
n = 43 (8.38%)
Serine (Ser, S)
n = 31 (6.04%)
Threonine (Thr, T)
n = 35 (6.82%)
Cysteine (Cys, C)
n = 1 (0.19%)
Valine (Val, V)
n = 36 (7.02%)
Leucine (Leu, L)
n = 60 (11.7%)
Isoleucine (Ile, I)
n = 39 (7.6%)
Methionine (Met, M)
n = 31 (6.04%)
Proline (Pro, P)
n = 29 (5.65%)
Phenylalanine (Phe, F)
n = 43 (8.38%)
Tyrosine (Tyr, Y)
n = 19 (3.7%)
Tryptophan (Trp, W)
n = 17 (3.31%)
Aspartic acid (Asp, D)
n = 15 (2.92%)
Glutamic acid (Glu, E)
n = 10 (1.95%)
Asparagine (Asn, N)
n = 16 (3.12%)
Glutamine (Gln, Q)
n = 6 (1.17%)
Histidine (His, H)
n = 18 (3.51%)
Lysine (Lys, K)
n = 9 (1.75%)
Arginine (Arg, R)
n = 8 (1.56%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 28 | 11 | 27 | 14 | 9 | 20 | 7 | 10 | 6 | 0 | 12 | 4 | 16 | 4 | 25 | 18 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 4 | 0 | 1 | 19 | 7 | 17 | 0 | 13 | 5 | 22 | 7 | 11 | 6 | 12 | 0 | 12 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 6 | 15 | 2 | 12 | 4 | 11 | 0 | 1 | 3 | 7 | 12 | 2 | 0 | 8 | 8 | 10 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 8 | 9 | 1 | 10 | 5 | 8 | 1 | 5 | 0 | 3 | 0 | 0 | 0 | 1 | 0 | 15 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 151 | 111 | 134 | 118 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 77 | 134 | 94 | 209 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 28 | 107 | 192 | 187 | ||||||||||||
| COX2 (size: 684 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 8 (3.52%)
Alanine (Ala, A)
n = 7 (3.08%)
Serine (Ser, S)
n = 21 (9.25%)
Threonine (Thr, T)
n = 19 (8.37%)
Cysteine (Cys, C)
n = 2 (0.88%)
Valine (Val, V)
n = 13 (5.73%)
Leucine (Leu, L)
n = 35 (15.42%)
Isoleucine (Ile, I)
n = 17 (7.49%)
Methionine (Met, M)
n = 14 (6.17%)
Proline (Pro, P)
n = 14 (6.17%)
Phenylalanine (Phe, F)
n = 6 (2.64%)
Tyrosine (Tyr, Y)
n = 10 (4.41%)
Tryptophan (Trp, W)
n = 5 (2.2%)
Aspartic acid (Asp, D)
n = 11 (4.85%)
Glutamic acid (Glu, E)
n = 15 (6.61%)
Asparagine (Asn, N)
n = 7 (3.08%)
Glutamine (Gln, Q)
n = 5 (2.2%)
Histidine (His, H)
n = 8 (3.52%)
Lysine (Lys, K)
n = 4 (1.76%)
Arginine (Arg, R)
n = 6 (2.64%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 13 | 4 | 11 | 11 | 5 | 7 | 4 | 7 | 5 | 0 | 7 | 2 | 4 | 0 | 5 | 1 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 3 | 1 | 1 | 3 | 3 | 1 | 0 | 0 | 2 | 4 | 2 | 2 | 3 | 7 | 2 | 5 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 3 | 11 | 0 | 5 | 5 | 7 | 0 | 0 | 4 | 6 | 4 | 0 | 1 | 3 | 4 | 5 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 3 | 13 | 2 | 4 | 7 | 4 | 0 | 1 | 0 | 5 | 0 | 0 | 0 | 1 | 0 | 5 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 54 | 60 | 65 | 49 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 25 | 57 | 61 | 85 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 14 | 51 | 92 | 71 | ||||||||||||
| COX3 (size: 784 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 20 (7.69%)
Alanine (Ala, A)
n = 15 (5.77%)
Serine (Ser, S)
n = 23 (8.85%)
Threonine (Thr, T)
n = 21 (8.08%)
Cysteine (Cys, C)
n = 2 (0.77%)
Valine (Val, V)
n = 18 (6.92%)
Leucine (Leu, L)
n = 35 (13.46%)
Isoleucine (Ile, I)
n = 13 (5.0%)
Methionine (Met, M)
n = 10 (3.85%)
Proline (Pro, P)
n = 10 (3.85%)
Phenylalanine (Phe, F)
n = 22 (8.46%)
Tyrosine (Tyr, Y)
n = 10 (3.85%)
Tryptophan (Trp, W)
n = 12 (4.62%)
Aspartic acid (Asp, D)
n = 4 (1.54%)
Glutamic acid (Glu, E)
n = 8 (3.08%)
Asparagine (Asn, N)
n = 7 (2.69%)
Glutamine (Gln, Q)
n = 7 (2.69%)
Histidine (His, H)
n = 16 (6.15%)
Lysine (Lys, K)
n = 3 (1.15%)
Arginine (Arg, R)
n = 5 (1.92%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 11 | 2 | 9 | 8 | 7 | 12 | 0 | 8 | 5 | 2 | 5 | 4 | 7 | 2 | 11 | 11 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 1 | 0 | 2 | 5 | 6 | 4 | 0 | 4 | 6 | 8 | 2 | 3 | 3 | 4 | 0 | 4 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 6 | 10 | 1 | 7 | 4 | 7 | 1 | 1 | 3 | 7 | 3 | 3 | 0 | 5 | 2 | 3 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 13 | 7 | 1 | 1 | 3 | 3 | 0 | 1 | 0 | 4 | 0 | 0 | 0 | 0 | 0 | 9 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 65 | 65 | 58 | 73 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 43 | 65 | 55 | 98 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 13 | 75 | 97 | 76 | ||||||||||||
| CYTB (size: 1140 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 24 (6.33%)
Alanine (Ala, A)
n = 22 (5.8%)
Serine (Ser, S)
n = 24 (6.33%)
Threonine (Thr, T)
n = 25 (6.6%)
Cysteine (Cys, C)
n = 4 (1.06%)
Valine (Val, V)
n = 24 (6.33%)
Leucine (Leu, L)
n = 59 (15.57%)
Isoleucine (Ile, I)
n = 34 (8.97%)
Methionine (Met, M)
n = 16 (4.22%)
Proline (Pro, P)
n = 22 (5.8%)
Phenylalanine (Phe, F)
n = 29 (7.65%)
Tyrosine (Tyr, Y)
n = 15 (3.96%)
Tryptophan (Trp, W)
n = 12 (3.17%)
Aspartic acid (Asp, D)
n = 11 (2.9%)
Glutamic acid (Glu, E)
n = 6 (1.58%)
Asparagine (Asn, N)
n = 15 (3.96%)
Glutamine (Gln, Q)
n = 6 (1.58%)
Histidine (His, H)
n = 13 (3.43%)
Lysine (Lys, K)
n = 10 (2.64%)
Arginine (Arg, R)
n = 8 (2.11%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 16 | 18 | 13 | 19 | 7 | 19 | 1 | 12 | 6 | 0 | 5 | 9 | 8 | 2 | 14 | 15 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 3 | 0 | 4 | 2 | 10 | 10 | 0 | 7 | 6 | 11 | 0 | 8 | 5 | 9 | 0 | 6 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 9 | 10 | 0 | 6 | 4 | 11 | 0 | 1 | 2 | 4 | 11 | 0 | 1 | 5 | 10 | 7 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 6 | 5 | 1 | 2 | 9 | 9 | 1 | 0 | 3 | 5 | 0 | 1 | 0 | 0 | 0 | 12 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 87 | 95 | 104 | 94 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 52 | 90 | 76 | 162 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 9 | 128 | 141 | 102 | ||||||||||||
| ND1 (size: 956 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 12 (3.79%)
Alanine (Ala, A)
n = 28 (8.83%)
Serine (Ser, S)
n = 18 (5.68%)
Threonine (Thr, T)
n = 29 (9.15%)
Cysteine (Cys, C)
n = 2 (0.63%)
Valine (Val, V)
n = 16 (5.05%)
Leucine (Leu, L)
n = 57 (17.98%)
Isoleucine (Ile, I)
n = 23 (7.26%)
Methionine (Met, M)
n = 22 (6.94%)
Proline (Pro, P)
n = 22 (6.94%)
Phenylalanine (Phe, F)
n = 21 (6.62%)
Tyrosine (Tyr, Y)
n = 9 (2.84%)
Tryptophan (Trp, W)
n = 9 (2.84%)
Aspartic acid (Asp, D)
n = 3 (0.95%)
Glutamic acid (Glu, E)
n = 10 (3.15%)
Asparagine (Asn, N)
n = 13 (4.1%)
Glutamine (Gln, Q)
n = 7 (2.21%)
Histidine (His, H)
n = 2 (0.63%)
Lysine (Lys, K)
n = 8 (2.52%)
Arginine (Arg, R)
n = 7 (2.21%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 11 | 12 | 20 | 8 | 9 | 20 | 3 | 17 | 6 | 1 | 4 | 4 | 7 | 1 | 14 | 7 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 2 | 1 | 1 | 10 | 7 | 11 | 0 | 1 | 2 | 8 | 1 | 5 | 10 | 6 | 1 | 8 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 8 | 13 | 0 | 3 | 8 | 6 | 0 | 0 | 1 | 4 | 5 | 1 | 0 | 7 | 6 | 0 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 2 | 8 | 2 | 1 | 2 | 7 | 1 | 2 | 0 | 5 | 0 | 0 | 0 | 0 | 0 | 8 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 69 | 78 | 96 | 75 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 31 | 96 | 52 | 139 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 13 | 84 | 142 | 79 | ||||||||||||
| ND2 (size: 1042 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 17 (4.91%)
Alanine (Ala, A)
n = 15 (4.34%)
Serine (Ser, S)
n = 33 (9.54%)
Threonine (Thr, T)
n = 38 (10.98%)
Cysteine (Cys, C)
n = 1 (0.29%)
Valine (Val, V)
n = 8 (2.31%)
Leucine (Leu, L)
n = 61 (17.63%)
Isoleucine (Ile, I)
n = 32 (9.25%)
Methionine (Met, M)
n = 29 (8.38%)
Proline (Pro, P)
n = 19 (5.49%)
Phenylalanine (Phe, F)
n = 19 (5.49%)
Tyrosine (Tyr, Y)
n = 11 (3.18%)
Tryptophan (Trp, W)
n = 10 (2.89%)
Aspartic acid (Asp, D)
n = 2 (0.58%)
Glutamic acid (Glu, E)
n = 5 (1.45%)
Asparagine (Asn, N)
n = 18 (5.2%)
Glutamine (Gln, Q)
n = 9 (2.6%)
Histidine (His, H)
n = 3 (0.87%)
Lysine (Lys, K)
n = 14 (4.05%)
Arginine (Arg, R)
n = 3 (0.87%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 18 | 14 | 27 | 13 | 13 | 21 | 1 | 11 | 9 | 0 | 3 | 2 | 3 | 0 | 6 | 13 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 2 | 0 | 1 | 2 | 5 | 7 | 1 | 1 | 3 | 11 | 2 | 8 | 3 | 8 | 0 | 6 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 13 | 18 | 1 | 6 | 7 | 16 | 0 | 2 | 2 | 6 | 5 | 1 | 2 | 7 | 11 | 1 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 2 | 3 | 2 | 2 | 0 | 13 | 1 | 0 | 0 | 3 | 0 | 0 | 0 | 0 | 0 | 9 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 47 | 82 | 135 | 83 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 35 | 101 | 62 | 149 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 13 | 94 | 159 | 81 | ||||||||||||
| ND3 (size: 1042 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 17 (4.91%)
Alanine (Ala, A)
n = 15 (4.34%)
Serine (Ser, S)
n = 33 (9.54%)
Threonine (Thr, T)
n = 38 (10.98%)
Cysteine (Cys, C)
n = 1 (0.29%)
Valine (Val, V)
n = 8 (2.31%)
Leucine (Leu, L)
n = 61 (17.63%)
Isoleucine (Ile, I)
n = 32 (9.25%)
Methionine (Met, M)
n = 29 (8.38%)
Proline (Pro, P)
n = 19 (5.49%)
Phenylalanine (Phe, F)
n = 19 (5.49%)
Tyrosine (Tyr, Y)
n = 11 (3.18%)
Tryptophan (Trp, W)
n = 10 (2.89%)
Aspartic acid (Asp, D)
n = 2 (0.58%)
Glutamic acid (Glu, E)
n = 5 (1.45%)
Asparagine (Asn, N)
n = 18 (5.2%)
Glutamine (Gln, Q)
n = 9 (2.6%)
Histidine (His, H)
n = 3 (0.87%)
Lysine (Lys, K)
n = 14 (4.05%)
Arginine (Arg, R)
n = 3 (0.87%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 18 | 14 | 27 | 13 | 13 | 21 | 1 | 11 | 9 | 0 | 3 | 2 | 3 | 0 | 6 | 13 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 2 | 0 | 1 | 2 | 5 | 7 | 1 | 1 | 3 | 11 | 2 | 8 | 3 | 8 | 0 | 6 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 13 | 18 | 1 | 6 | 7 | 16 | 0 | 2 | 2 | 6 | 5 | 1 | 2 | 7 | 11 | 1 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 2 | 3 | 2 | 2 | 0 | 13 | 1 | 0 | 0 | 3 | 0 | 0 | 0 | 0 | 0 | 9 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 47 | 82 | 135 | 83 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 35 | 101 | 62 | 149 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 13 | 94 | 159 | 81 | ||||||||||||
| ND4 (size: 1378 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 17 (3.71%)
Alanine (Ala, A)
n = 27 (5.9%)
Serine (Ser, S)
n = 43 (9.39%)
Threonine (Thr, T)
n = 40 (8.73%)
Cysteine (Cys, C)
n = 4 (0.87%)
Valine (Val, V)
n = 12 (2.62%)
Leucine (Leu, L)
n = 86 (18.78%)
Isoleucine (Ile, I)
n = 55 (12.01%)
Methionine (Met, M)
n = 32 (6.99%)
Proline (Pro, P)
n = 24 (5.24%)
Phenylalanine (Phe, F)
n = 21 (4.59%)
Tyrosine (Tyr, Y)
n = 15 (3.28%)
Tryptophan (Trp, W)
n = 13 (2.84%)
Aspartic acid (Asp, D)
n = 3 (0.66%)
Glutamic acid (Glu, E)
n = 8 (1.75%)
Asparagine (Asn, N)
n = 18 (3.93%)
Glutamine (Gln, Q)
n = 9 (1.97%)
Histidine (His, H)
n = 12 (2.62%)
Lysine (Lys, K)
n = 10 (2.18%)
Arginine (Arg, R)
n = 10 (2.18%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 36 | 19 | 28 | 15 | 7 | 35 | 2 | 25 | 8 | 1 | 5 | 0 | 6 | 1 | 13 | 8 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 4 | 2 | 2 | 11 | 5 | 10 | 1 | 4 | 5 | 8 | 0 | 12 | 7 | 5 | 0 | 8 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 10 | 19 | 3 | 7 | 10 | 16 | 0 | 6 | 4 | 10 | 5 | 1 | 2 | 8 | 10 | 6 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 6 | 6 | 2 | 1 | 2 | 9 | 1 | 2 | 0 | 7 | 1 | 0 | 0 | 0 | 0 | 12 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 67 | 114 | 165 | 113 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 54 | 124 | 75 | 206 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 19 | 100 | 194 | 146 | ||||||||||||
| ND4L (size: 297 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 4 (4.08%)
Alanine (Ala, A)
n = 6 (6.12%)
Serine (Ser, S)
n = 10 (10.2%)
Threonine (Thr, T)
n = 4 (4.08%)
Cysteine (Cys, C)
n = 4 (4.08%)
Valine (Val, V)
n = 6 (6.12%)
Leucine (Leu, L)
n = 21 (21.43%)
Isoleucine (Ile, I)
n = 9 (9.18%)
Methionine (Met, M)
n = 9 (9.18%)
Proline (Pro, P)
n = 2 (2.04%)
Phenylalanine (Phe, F)
n = 6 (6.12%)
Tyrosine (Tyr, Y)
n = 4 (4.08%)
Tryptophan (Trp, W)
n = 0 (0%)
Aspartic acid (Asp, D)
n = 1 (1.02%)
Glutamic acid (Glu, E)
n = 2 (2.04%)
Asparagine (Asn, N)
n = 5 (5.1%)
Glutamine (Gln, Q)
n = 2 (2.04%)
Histidine (His, H)
n = 2 (2.04%)
Lysine (Lys, K)
n = 0 (0%)
Arginine (Arg, R)
n = 1 (1.02%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 5 | 4 | 8 | 3 | 3 | 11 | 1 | 3 | 2 | 0 | 0 | 2 | 4 | 0 | 3 | 3 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 1 | 1 | 3 | 3 | 1 | 2 | 0 | 1 | 1 | 2 | 0 | 1 | 1 | 0 | 0 | 1 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 1 | 1 | 1 | 2 | 3 | 5 | 0 | 0 | 0 | 0 | 4 | 0 | 0 | 3 | 2 | 1 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 1 | 2 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 1 | 0 | 0 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 19 | 25 | 27 | 28 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 9 | 22 | 17 | 51 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 3 | 30 | 42 | 24 | ||||||||||||
| ND5 (size: 1818 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 27 (4.46%)
Alanine (Ala, A)
n = 35 (5.79%)
Serine (Ser, S)
n = 53 (8.76%)
Threonine (Thr, T)
n = 54 (8.93%)
Cysteine (Cys, C)
n = 6 (0.99%)
Valine (Val, V)
n = 27 (4.46%)
Leucine (Leu, L)
n = 96 (15.87%)
Isoleucine (Ile, I)
n = 52 (8.6%)
Methionine (Met, M)
n = 36 (5.95%)
Proline (Pro, P)
n = 26 (4.3%)
Phenylalanine (Phe, F)
n = 43 (7.11%)
Tyrosine (Tyr, Y)
n = 23 (3.8%)
Tryptophan (Trp, W)
n = 12 (1.98%)
Aspartic acid (Asp, D)
n = 10 (1.65%)
Glutamic acid (Glu, E)
n = 11 (1.82%)
Asparagine (Asn, N)
n = 33 (5.45%)
Glutamine (Gln, Q)
n = 15 (2.48%)
Histidine (His, H)
n = 15 (2.48%)
Lysine (Lys, K)
n = 22 (3.64%)
Arginine (Arg, R)
n = 9 (1.49%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 27 | 25 | 31 | 17 | 22 | 30 | 2 | 24 | 13 | 2 | 3 | 8 | 16 | 0 | 22 | 21 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 5 | 4 | 2 | 10 | 12 | 12 | 1 | 1 | 7 | 14 | 5 | 12 | 5 | 9 | 0 | 20 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 17 | 15 | 2 | 12 | 7 | 26 | 1 | 3 | 4 | 9 | 14 | 2 | 1 | 14 | 19 | 4 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 11 | 9 | 2 | 4 | 6 | 20 | 2 | 1 | 2 | 6 | 0 | 0 | 0 | 1 | 0 | 10 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 110 | 136 | 204 | 156 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 61 | 161 | 130 | 254 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 25 | 182 | 236 | 163 | ||||||||||||
| ND6 (size: 525 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 25 (14.37%)
Alanine (Ala, A)
n = 7 (4.02%)
Serine (Ser, S)
n = 13 (7.47%)
Threonine (Thr, T)
n = 5 (2.87%)
Cysteine (Cys, C)
n = 2 (1.15%)
Valine (Val, V)
n = 23 (13.22%)
Leucine (Leu, L)
n = 22 (12.64%)
Isoleucine (Ile, I)
n = 13 (7.47%)
Methionine (Met, M)
n = 11 (6.32%)
Proline (Pro, P)
n = 3 (1.72%)
Phenylalanine (Phe, F)
n = 14 (8.05%)
Tyrosine (Tyr, Y)
n = 9 (5.17%)
Tryptophan (Trp, W)
n = 5 (2.87%)
Aspartic acid (Asp, D)
n = 4 (2.3%)
Glutamic acid (Glu, E)
n = 11 (6.32%)
Asparagine (Asn, N)
n = 3 (1.72%)
Glutamine (Gln, Q)
n = 0 (0%)
Histidine (His, H)
n = 0 (0%)
Lysine (Lys, K)
n = 2 (1.15%)
Arginine (Arg, R)
n = 2 (1.15%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 13 | 0 | 5 | 1 | 0 | 1 | 0 | 16 | 0 | 0 | 10 | 0 | 5 | 8 | 13 | 1 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 6 | 2 | 0 | 3 | 0 | 2 | 2 | 5 | 1 | 8 | 11 | 2 | 0 | 0 | 1 | 1 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 0 | 2 | 2 | 3 | 0 | 3 | 2 | 5 | 0 | 6 | 3 | 2 | 4 | 2 | 1 | 0 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 0 | 7 | 4 | 4 | 0 | 0 | 2 | 2 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 3 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 70 | 7 | 40 | 58 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 40 | 23 | 29 | 83 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 44 | 6 | 53 | 72 | ||||||||||||
| Total protein-coding genes (size: 11401 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 216 (5.69%)
Alanine (Ala, A)
n = 232 (6.11%)
Serine (Ser, S)
n = 296 (7.8%)
Threonine (Thr, T)
n = 303 (7.98%)
Cysteine (Cys, C)
n = 29 (0.76%)
Valine (Val, V)
n = 198 (5.21%)
Leucine (Leu, L)
n = 612 (16.12%)
Isoleucine (Ile, I)
n = 322 (8.48%)
Methionine (Met, M)
n = 235 (6.19%)
Proline (Pro, P)
n = 200 (5.27%)
Phenylalanine (Phe, F)
n = 252 (6.64%)
Tyrosine (Tyr, Y)
n = 132 (3.48%)
Tryptophan (Trp, W)
n = 105 (2.77%)
Aspartic acid (Asp, D)
n = 69 (1.82%)
Glutamic acid (Glu, E)
n = 98 (2.58%)
Asparagine (Asn, N)
n = 152 (4.0%)
Glutamine (Gln, Q)
n = 79 (2.08%)
Histidine (His, H)
n = 99 (2.61%)
Lysine (Lys, K)
n = 95 (2.5%)
Arginine (Arg, R)
n = 66 (1.74%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 201 | 121 | 197 | 135 | 87 | 199 | 24 | 154 | 73 | 6 | 56 | 39 | 84 | 19 | 144 | 108 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 38 | 11 | 18 | 80 | 61 | 85 | 6 | 39 | 42 | 104 | 31 | 81 | 49 | 65 | 5 | 79 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 81 | 127 | 16 | 71 | 56 | 118 | 4 | 20 | 27 | 63 | 69 | 13 | 13 | 73 | 79 | 44 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 55 | 79 | 19 | 31 | 38 | 84 | 11 | 17 | 6 | 42 | 1 | 2 | 0 | 6 | 0 | 92 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 813 | 889 | 1156 | 940 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 465 | 984 | 730 | 1619 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 206 | 936 | 1511 | 1145 | ||||||||||||
>NC_026706.1 Cynomys ludovicianus mitochondrion, complete genome GTTAATGTAGCTTAATCCAACAAAGCAAAGCACTGAAAATGCTTAGATGGGTATTTCCTACCCCATAAAC AATAGGTTTGGTCCTAGCCTTTTCATTAGCTTCTAGTTAACTTATACATGCAAGCATCCCCGCCCCAGTG AGAATGCCCTCTATGTCTATACTGATCAAAAGGTGCAGGCATCAAGTTCACTAACCCTAGTAGCTCACAA CGCCTTGCTCCACCACACCCCCACGGGACACAGCAGTAATTAAAATTAAGCCTATAAACGAAAGTTTGAC TAAGTTAAACTAAATTCAGGGTTGGTAAATTTCGTGCCAGCCACCGCGGTCATACGATTAACCCTAGTTA ATGGAATACGGCGTAAAGCGTGATTAAGAGACTAATTAAATAAGATTAAAATAATACTAAACCGTAAAAA GTCTTGGTATTGATAAAAATCAAATACGAAAGTAATCTTAAATTTTCTGAATTCACGATAGCTAAGACTC AAACTGGGATTAGATACCCCACTATGCTTAGCCCTAAACATAAATATTCAACAAACAAGAATATTCGCCA GAGTACTACTAGCAATAGCCTAAAACTCAAAGGACTTGGCGGTGCTTTACACCCCTCTAGAGGAGCCTGT TCTATAATCGATAAACCCCGATACACCTCACCACCTTTAGCAAATATCAGCCTATATACCGCCATCTACA GCAAACCCTAAAAAGGTCTTATAGTAAGCAAGAAAATTTTACATTAGCACGTTAGGTCAAGGTGTAGCCT ATAAGGTGGGAAGAAATGGGCTACATTTTCTACTCTCCTAGAACAAACACTCACGATAGCTTTTATGAAA CTTAAAGCATAAGGCGGATTTAGTAGTAAGTTAAGAATAGAGAGCTTAACTGAATAGGGCAATAAAGCAC GCACACACCGCCCGTCACCCTCTTCAAATATCTCAATAAAATATTATAAATAATTTACTTAACCAAAGAT ATAAGAAGAGACAAGTCGTAACAAGGTAAACATACTGGAAAGTGTGTTTGGAAGAATCAAAATGTAGCTT ATCTACTAAAGCACTCGGCTTACACCCAAGAGATTTCATTCACTATGAACATTTTGAACTAATGCTAGCC TAACTTCTTCCCCCTCCTAAATACTATTAACTTAATAAATAAAACATTTACCTAAATAAAGTATAGGAGA TAGAAATTTACATCAAGAGCTATAGAGAGAGTACCGTAAGGGAAAGATGAAAGAATAAATTCATGGTATA TAAAAGCAAAGATAAACCCTTTTACCTTTTGCATAATGATTTAACTAGAAAATGCTTGACAAAAAGAATT TAAGCCAAACACCCCGAAACCAGACGAGCTACCTATGAGCAGCCATAAGAGCCCATCCGTCTATGTTGCA AAATAGTGGAATGACTCATAAGTAGAGGTGAAAAGCCTACCGAGCCTGGTGATAGCTGGTTGTCCAGACT AGAATTTTAGTTCTACTTTAAATTTACCTTAAGCACTAATAAGCCAAATGTAAACTTAAATGTTACTCTA AAGAGGGACAGCTCTTTAGAGTTAAGGAATAAACCTTATTTAGAGAGTAAATCTATTAATTCCCATAGTT GGCCTAAAAGCAGCCATCAATTAAAAAAGCGTTAAAGCTTAACCTACTTATCAAAACTTAATACCCAACT CCTTTAATGACCTCCCAAATCAAATACTGGACTAATCTATTTCATAATAGAAGAAATCATGTTAAAATAA GTAACAAGAAAATATTCTCCCTGCATAAGCTTATATCAGATCGAATGATTCACTGATAGTTAACAACCTC ATAATATTAAACAAAATACATAACCATTATTATCTACACTGTTAACCCAACACTGGTATGCATAAAGGGA AAGATTAAATAAAGTAAAAGGAACTCGGCAAACACTAACCTCGCCTGTTTACCAAAAACATCACCTCTAG CATAAATAGTATTAGAGGCACTGCCTGCCCAGTGACATACGTTCAACGGCCGCGGTATCCTGACCGTGCA AAGGTAGCATAATCACTTGTTCTTTAAATAAGGACTAGTATGAATGGCTTGACGAAGGTTTAACTGTCTC TTACTTTTAATCAGTGAAATTGACCTTCCCGTGAAGAGGCGGGAATTTCCTAATAAGACGAGAAGACCCT ATGGAGCTTTAATTTAATAGTCTCACAGCCCTAATTATATCTAAGGAGTTAAAAATCTTTGTTCATAGAC TAGAAATTTTGGTTGGGGTGACCTCGGAGAATAAACTAACCTCCGAATGATAATAATCTAGACACTACAA GTCCAAATTACAATTCATTAATTGACCCAAATTATTGATCAACGGAACAAGTTACCCTAGGGATAACAGC GCAATCCTATTCAAGAGTCCATATCGACAATTAGGGTTTACGACCTCGATGTTGGATCAGGACATCCAAA TGGTGTAACCGCTATTAATGGTTCGTTTGTTCAACGATTAAAGTCCTACGTGATCTGAGTTCAGACCGGA GAAATCCAGGTCGGTTTCTATCTATTACTATATTTCTCCCAGTACGAAAGGACAAGAGAAATGAGGCCAA TTACACAATCATGCCTTAAATTAATGGATGAAACAATCTTAATCCAATAAAATATTTAAAATAATCTGCC CTAGAAAAGGGCTTGTTAAGATGGCAGAGCCTGGCTAATTGCGTAAGACTTAAAATCTTATTTCAGAGGT TCAACTCCTCTTCTTAATATTAATGTTCATAATTAACCTTCTACTTTTAATCGTCCCAATCTTAGTAGCT ATAGCTTTCCTTACCCTAATCGAACGAAAAATATTAGGATATATACAACTTCGTAAAGGCCCTAATGTTG TCGGACCTTACGGCCTACTCCAACCATTTGCTGACGCAATAAAACTATTTGTTAAAGAACCCATAAAGCC CCTGACATCCTCTATTATACTATTTATTATTGCCCCAACCCTTGCTCTAACACTGGCCTTTACCATATGA ATCCCCCTACCCATACCCACACCCCTAATCAATATAAATATAGGAGTCCTATTTATTTTAGCTACTTCAA GCTTAGCCGTATATGCAATCCTATGATCCGGATGAGCTTCCAATTCTAAATATGCTTTAATTGGAGCCCT ACGAGCCGTAGCACAAACTATTTCATACGAAGTAACATTAGCAGTTATCCTTCTATCAGTGCTTCTAATA AACGGGTCCTTTACTTTATCCACACTTATCACTACCCAGCAATTTACATGACTCCTACTCCCAACATGAC CCCTAGCAATAATATGATTTACTTCAACATTAGCAGAAACTAATCGAGCTCCGTTCGATTTAACAGAAGG AGAATCAGAACTCGTATCAGGATTTAATGTTGAATACGCAGCCGGTCCATTTGCCTTATTCTTCATAGCT GAGTACACCAACATTATCATAATAAACGCATTAACAGTAACCCTCTTTATAGGAGCACTGCTAAACCCTA TTTCTCCCGAGACCTTTACATTAAATTTCGTCCTAAAAACACTCATTTTAACTTCCACTTTTTTATGGAT CCGAGCATCCTACCCTCGATTCCGTTATGACCAACTCATGCACCTCCTATGAAAAAACTTTTTACCCCTA ACCCTAGCTTTATGCATATGACACATCTCCCTCCCAATTATAACAGCATGTGTACCTCCCCAAATCTAAG AAATATGTCTGATAAAAGAGTTACTTTGATAGAGTAAATTATAGAGGTTTAAATCCTCTTATTTCTAGGA CCATAGGAATCGAACCTAATCCTAAGAATCCAAAATTCTCCGTGCTACCTCTTACACCACGTCCTAAACA GTAAGGTCAGCTAAATAAGCTATCGGGCCCATACCCCGAAAATGTTGGTTTATATCCTTCCCGTACTAAT TAACCCCCTAACTTCCTCCACAATCTACTTCACTCTCTTCTCTGGAACCATAGTTACACTTTTCAGTTCA CATTGACTTCTAACTTGAGTTGGACTAGAAATAAGTATATTAGCTATTATCCCTATTCTAATTGATAAAG GAAACCCTCGATCCACAGAGGCCGCATGCAAATATTTCCTCATTCAAGCCACCGCATCAATAATCTTAAT AATAGGCACAATAATCAATTTTATAGATTCAGGTCAATGGACCTTGTCTAACTCATACAACCAAATCTCA TCATTAATATTTACAATTGCACTCTCAATAAAAATAGGACTTGCCCCATTCCACCTATGAGTCCCAGAAG TTACCCAAGGAATTCCACTTAAATCAGGACTAATTGTATTAACATGACAAAAAATTGCTCCAATTTCTAT CGTATATCAAATCGCGCCCTCTATAAACTCAACCCTCATATTACTTATAGGAACCTTATCAATCATGCTA GGAGGCTGAGGAGGACTTAACCAAACCCAACTACGAAAGATCATAGCATACTCATCAATCGCCCACATGG GGTGAATAATAGCAATTGTCACATATAATCCAACCCTAACAATATTCAACTTAATTATCTATCTTATACT CACCATTAATATATTTATACTCCTCCTTTTCTACAAAAAAACTACTACCCTTTCCCTATCCAACATATGA AGCAAATTCCCTCTCCTAACACCTACAATCTTAATTGTACTAATATCACTAGGAGGCTTACCTCCTCTAA CAGGGTTCACACCAAAATGAGCCATCCTTAAAGAGCTTATCTCAAATAACAACATTACATTCTCCACACT AATAGCAATACTAGCACTGCTAAATTTGTACTTCTATACGCGACTTATTTATTCAACATCTCTAACCTTA TTCCCATCATTTAATAACACCAAAATAAAATGACAATTTGAAAATACAAAACTCACACCTTTTCTACCTA CACTTATTATTACCTCTACTCTCTCCCTCCCACTAATACCCCTCTTCTTACTCCTAAGCTAGGAATTTAG GTTAACCCAGACCAAGGACCTTCAAAGTCCTAAGCAAGTACTTAATACTTAATTCCTGCACTAAGGACTG CAAGACTCTATCTTACATCAATTGAATGCAAACCAATCACTTTAATTAAGCTAAGCCCTTAATCTCTAGA CTGATGGGATTTAAACCCATAAGACCTTAGTTAACAGCTAAACGCCCTACTCAACTGGCTTCAATCTACT TCTCCCGCCGTTAGGGGAAAAAGGCGGGAGAAGCCCCGGCAGAGTTGAAGCTGCTCCTTTGAATTTGCAA TTCAATATGAATGTTCACCTCGGGACTTGGCAAAAAGAGGGCTCAACCTCTGTCTTTAGATTTACAGTCT AATGCTTACTCAGCCATTTTACCACCTACCTATGTTCATCAACCGTTGATTCTTCTCAACTAATCATAAA GATATCGGTACACTTTACCTTCTATTTGGCGCTTGAGCCGGAATAGTAGGAACTGCACTCAGCCTACTAA TCCGTGCTGAACTAGGTCAACCTGGAGCTCTATTAGGTGATGACCAAATTTATAATGTTATTGTTACTGC TCATGCATTTGTTATAATTTTCTTTATAGTAATACCAATTATAATCGGTGGATTTGGGAACTGACTAGTG CCCCTAATAATTGGGGCTCCTGATATAGCATTCCCACGTTTAAATAATATAAGCTTCTGGCTTCTTCCCC CTTCTTTTCTCCTCCTGCTCGCTTCTTCTATAGTTGAAGCAGGCGCAGGAACCGGCTGAACCGTATACCC TCCATTAGCTGGAAATCTTGCCCATGCAGGAGCTTCAGTAGACCTAACCATTTTCTCCCTTCACTTAGCA GGAGTTTCATCTATTCTAGGTGCAATTAACTTTATTACAACAATTATTAACATAAAACCACCTGCCATGT CTCAATATCAAACCCCTCTATTTGTCTGATCCGTACTAATTACAGCAGTACTGTTACTCCTGTCTCTCCC AGTTCTTGCAGCAGGAATTACAATACTGCTTACGGACCGTAACCTTAACACTACATTTTTTGACCCTGCT GGAGGTGGGGATCCTATTCTCTATCAACACCTGTTCTGATTTTTTGGACATCCTGAAGTTTATATTCTTA TTCTTCCAGGATTTGGTATAATTTCTCATATCGTAACGTACTACTCAGGAAAAAAGGAACCATTCGGTTA TATAGGGATAGTGTGGGCTATAATATCTATTGGTTTCCTTGGATTTATCGTATGAGCCCACCATATATTC ACTGTTGGAATAGATGTAGATACTCGAGCTTACTTTACATCCGCAACCATAATCATTGCTATCCCCACAG GGGTAAAAGTTTTTAGCTGACTAGCAACCCTGCACGGAGGAAATATTAAATGATCACCAGCTATACTGTG AGCACTCGGCTTTATTTTCCTATTCACTGTAGGAGGCCTAACAGGGATCGTCTTAGCCAACTCTTCATTA GATATTGTTCTACACGATACATACTACGTAGTGGCCCACTTTCACTACGTATTATCAATGGGAGCTGTAT TTGCTATTATAGGAGGTTTCATTCACTGATTCCCCCTTTTTTCTGGTTATACACTAAGTGATATGTGAGC TAAAATCCATTTTACTGTGATATTTGTTGGAGTAAATTTAACTTTCTTCCCTCAACATTTCTTAGGACTA TCAGGTATACCACGTCGATACTCTGACTACCCAGATGCCTACACAGCATGAAATACTGTCTCCTCAATAG GTTCATTTATTTCTCTCACAGCTGTTATAATTATAATCTTTATAATTTGAGAAGCATTTGCATCAAAACG AGAAGTCCTTGCTGTAGAGCTAACACCAACTAACCTAGAATGACTACATGGGTGCCCTCCACCCTATCAT ACATTTGAAGAACCCACTTACATTAAAGCTTAAAGCAAGAAAGGAAAGAATCGAACTTTCTAAGACTAGT TTCAAGCCAGCCTCATAACCATTATGACTTTCTTTATGAGATATTAGTAAAGTAATTACATAACTTTGTC AAAGTTAACTCATAGGTTGAACTCCTATATATCTCCATGGCATACCCGCTCGAACTAGGATTTCAAGACG CCACATCTCCTATTATAGAAGAACTTTTACATTTTCACGACCATACTCTCATAATTGTTTTCTTGATTAG CTCTCTAGTCCTCTATATCATCTCATTAATGCTAACTACAAAATTAACCCATACAAGCACTATAGATGCT CAAGAAGTAGAAACTATTTGAACCATTCTTCCCGCTATTATCCTTATTCTGATTGCCCTTCCCTCTCTGC GTATTTTATATATAATAGACGAAATTAATAACCCGTCCTTAACAGTAAAAACAATAGGCCATCAATGATA TTGAAGCTACGAGTATACAGACTACGAAGACCTTAACTTTGATTCCTACATAGTTCCAACTTCAGAGTTA ACCCCCGGAGACCTGCGACTCCTGGAAGTCGATAATCGAGTTGTTCTTCCAATAGAACTACCTGTACGAA TACTAATTTCATCTGAAGATGTACTTCACTCTTGAACAGTTCCATCCCTTGGACTAAAAACAGACGCCAT CCCAGGCCGACTAAATCAAGCTACACTTACATCAACACGACCAGGGCTCTATTATGGGCAATGCTCCGAA ATTTGTGGATCAAACCATAGCTTTATGCCAATTGTTCTTGAAATAGTTCCATTAAAACACTTTGAAAACT GATCCTCATCAATACTTTAAATTCATTATGAAGCTAAAATAGCATCAACCTTTTAAGTTGAAGATTAGGA GTTAAACCTCCTCATAATGAAATGCCCCAACTAGACACATCTACATGATTTACCACAATTCTATCAATAA TTCTAGCTCTTTTCTTTATATTTCAACTTAAAATCTCAAATCACTTTTACCCGTCTAATCCTTCCCCTAA AGACACTAAACTAACTGAACATAAAACTCCTTGAGAAGAAAAATGAACGAAAATCTATTTGCCTCTTTCA TTACCCCTTCATTAATAGGTCTTCCTATTGTTCTCTTTATCATTATATTTCCCAGTTTACTTTTTCCCTC ACCTACTCGACGACTAACAAATAATCGTCTAGTGTCATTCCAACAATGACTAATCCAACTTGTATTAAAA CAACTAATGGCAATGCACAACCCAAAAGGACGTACCTGGTCCCTGATACTAATCACGTTAATTATGTTTA TTGGCTCAACTAATCTTCTAGGCCTATTACCTCATTCCTTCACACCAACAACCCAACTATCAATAAATTT AGGAATAGCTATCCCTCTATGAGCAGGAGCTGTAATTACTGGATTTCGTCATAAGACCAAAGCATCATTA GCCCATTTCCTCCCACAAGGAACCCCAATTCCTCTTATCCCTATACTTATTATTATTGAGACAATCAGCC TTTTTATCCAACCCATAGCATTAGCTGTACGATTGACAGCTAATATTACAGCCGGCCATCTTCTTATGCA TTTAATTGGAGGAGCAACCCTTGTACTAATATCTATCAGCCCTCCTACAGCTATAATCACTTTTATTATT CTTGTACTATTAACGATGCTTGAATTTGCAGTCGCACTAATCCAAGCTTATGTCTTTACTCTCTTAGTAA GCCTATATTTACACGATAATACATAATGACCCACCAGACTCACGCCTACCATATAGTTAACCCTAGCCCT TGGCCACTAACAGGGGCCCTCTCTGCCTTACTCATAACATCCGGCCTAGTAATATGATTTCACTTCAATT CTTCCCTTCTCCTTACACTAGGCCTTATAACTAATACTTTAACAATATATCAGTGGTGACGAGATGTCGT GCGAGAAGGTACGTTTCAAGGTCACCACACATCAATTGTCCAAAAAGGTCTACGATATGGCATAATTCTA TTTATCATTTCAGAAGTTTTCTTCTTTGCCGGATTTTTCTGGGCATTCTACCACTCTAGCCTAGCCCCAA CCCCCGAATTAGGCAGTTGCTGACCTCCAGTAGGAATTAATCCCCTTAACCCCTTAGAAGTCCCATTACT AAATACCTCCGTCCTTTTAGCTTCAGGAGTTTCAATTACCTGAGCTCACCACAGCCTAATAGAAGGGGAC CGAAAACATATAGTTCAAGCACTATCAATTACAATTGCTTTAGGACTTTATTTTACCCTTCTCCAAGCCT CTGAATATTTAGAGACTTCTTTCACAATCTCGGACGGAGTGTATGGATCAACATTCTTTATAGCTACAGG CTTCCATGGTCTCCACGTTATTATTGGATCCACCTTTCTCCTAGTATGCCTAATTCGTCAACTAAATTTC CACTTCACATCTAAACACCACTTTGGATTTGAAGCAGCTGCATGATATTGACACTTTGTAGACGTAGTAT GACTCTTCCTTTACGTATCTATTTATTGATGAGGCTCATATTCTCTTAGTATTAATTAGTACAATTGACT TCCAATCAATTAGTTCTGGAACCTATCCAGAAGAGAATAATAAACCTTATAATATCCCTCTTCATTAATT CTTTTATTGCTCTTCTACTAATTTCTGTAGCATTCTGATTACCTCAACTAAACGTATATGCTGAAAAGGC AAGCCCTTACGAATGCGGCTTTGACCCTATAGGATCTGCTCGCCTGCCATTCTCAATAAAATTTTTCCTA GTTGCGATTACATTCCTTTTATTTGATCTGGAGATTGCTCTTCTTCTTCCTCTCCCCTGAGCCTCTCAAA CAAACAACCTTAATCTTATATTAACGATAGCTTTACTATTAGTCTTAATTCTTACCCTTGGGTTAGCCTA CGAATGAGTCCAAAAAGGTTTAGAATGAATTGAATATGATAATTAGTTTAAAGTAAAACGGGTGATTTCG ACTCACTAAATTATGGGTCACCATAATTATCAAAATGCCTATCATTATTCTCAATACCATCCTAGCTTAC TCTACATCTCTACTAGGAATATTTATCTACCGATCCCATCTGATATCATCCCTTCTATGCTTAGAAGGAA TAATACTATCAATATTTGTCTTATGCTCACTCCTAATTATAAACTTCCACTTCTCCCTATCATTCATAAT TCCCATCACTTTACTAGTATTTGCTGCATGTGAAGCAGCTGTAGGTCTAGCCCTTCTCGTAATAGTATCA AATACGTACGGCCTAGACTACGTCCAAAACCTAAATATTCTTCAATGCTAAAAATTATTATACCCACAAT CCTACTTGCCCCCCTTACATGATTCTCAAAACCTTCTATAATCTGAATTAACCCTTCAATTCATAGTTTA ATAATTAGCCTAATTGTACTTCTCACATTAAATCGTCCTACAAACACAGACTTAATTTTTTCATTAGTTT TCTTTACTGATCCTTTGTCCTCTCCTCTATTAATTCTTACAGCATGACTCCTACCCCTTATAATTATAGC AAGTCAGAGTCATCTAACCCACGAACCACTAATCCGAAAGAAACTATATATTCTTATGTTAATCTCACTA CAATCCTTTTTAATTATGACTTTCTCTGCTACTGAACTAATCATATTTTATATTCTATTTGAGGCTACCT TAATCCCTACACTAATTATTATTACTCGATGAGGAAACCAAACCGAACGTCTAAATGCAGGCTTATATTT TCTATTCTATACCCTAGTAGGTTCATTACCTCTACTAGTAGCATTAATCTATATTCAAAAATCTACAGGA TCCTTAAACTTTATCATTTCATTATATCAATCATCTAACCTCCCTATATCCTGAACAAACAACATCCTAT GACTAGCATGCATTATAGCTTTTATAGTTAAAATACCTCTATATGGTCTTCACCTTTGACTACCAAAAGC TCACGTTGAAGCCCCCATTGCTGGTTCCATGGTTTTAGCTGCTATCCTACTGAAACTTGGCGGATACGGA ATAATTCGAATTTCAACTTTATTACACCCAATCACGTGTAATATAGCGTACCCCTTTATTATACTATCAC TGTGAGGCATAATTATAACAAGCTCAATTTGCTTACGACAAACAGACCTAAAATCCCTCATCGCTTACTC TTCAGTAAGCCATATAGCACTAGTAATCGTGGCAATCATAATTCAAACCCCCTGAAGTTTTATAGGAGCT ACGGCACTAATAATTGCCCACGGACTTACATCCTCCATATTATTCTGTCTAGCAAACACTAATTATGAAC GAATTCATAGCCGAACTATAATACTAGCCCGGGGCTTACAATCTATTCTTCCCCTTATAGCAACATGGTG AATTTTAGCTACCTTAACCAACTTAGCTCTCCCACCTTCCATTAATCTAATCGGTGAATTATTTATTATT ATATCATCATTCACCTGATCAAGTATTACAATTATCTTAACCGGACTAAATATACTAATCACAGCCCTCT ACTCACTATATATACTAACTGTAACACAATGAGGAAAATTTACATATCACACATTAAGTGTTAATCCTTC CTTCACGCGAGAGAATATACTCATATTCCTTCATCTTTTTCCACTTATTATCCTATCAACAAACCCTACC ATCATTCTAGGCCATTTGTACTGTAAATATAGTTTAAACAAAACTTTAGATTGTGAATCTAACAATAGAG AATGACAACCTCTTATTTACCAAGAAAGCATGCAAGAACTGCTAATTCATGCTCCCCGTGTTTACATCCA CGGCTTTCTTAACTTTCATAGGATAGTAGTAATCCATTGGTCTTAGGAACCAAAAAATTGGTGCAACTCC AAATGAAAGTAATAAATATATTTTCTTCACTTATCCTCACATCACTTGTAATCCTCTTATTCCCTATTTT CCTTACCATAACTAATTACCACAAACACATTAATTACCCAAACTACGTAAAAATCTCCATTATTTGCGCA TTATCACTCTGTATAGTACCAACACTAATGTTTATCAACTCAAACTATGAACTCATTATCTCAAACTGAC ACTGAGTAACTATCCAAACATTCACCCTCTCCATAAGCTTCAAACTAGACTATTTTTCTATATTATTTAT ACCTGTAGCACTATTCGTAACATGATCAATTATAGAATTCTCAATATGGTACATACACTCTGACCCTTTC ATTAACCGTTTCTTCAAATACCTCCTCTTATTCCTCATCACTATGATAATCCTAGTAACATCCAACAACC TATTTCAACTATTCATTGGCTGAGAAGGAGTTGGCATCATATCTTTTTTACTAATCGGGTGATGATATGG CCGAACAGATGCTAATACAGCAGCCCTCCAAGCTGTCCTATATAACCGAATCGGAGATATCGGATTTGTA TTAGCTATAGCATGATTTTTACTCAACTCAAACTCATGAGAATTTCAACAACTCTTCATAACAGACGTAC CTTTACTACCCTTAGTAGGATTGCTCTTAGCCGCCACAGGGAAATCCGCCCAATTCGGCCTTCATCCTTG ATTACCCTCTGCTATAGAGGGCCCAACCCCTGTATCAGCTTTACTTCACTCCAGTACTATAGTAGTAGCA GGAGTCTTCCTCCTCATCCGCTTCTACCCACTAATAGAACATAACAAAGCTATCCAAACACTCACTCTAT GTTTAGGGGCTATTACTACTCTATTTACCGCCATCTGTGCCCTTACCCAAAATGATATCAAAAAGATCAT CGCATTCTCCACTTCAAGCCAACTAGGATTAATAATAGTAACTATCGGAATTAATCAGCCTCACTTAGCT TTTCTCCACATTTGTACACACGCATTTTTTAAAGCCATACTATTCATATGCTCAGGATCAATTATTCATA ACCTAAATGATGAGCAAGACATTCGAAAAATAGGAGGACTCTTCAAAGCCCTTCCACTTACCTCATCCTC ACTTACTATCGGCAGTTTAGCACTAACGGGAACCCCTTTTCTAACTGGATTTTACTCTAAAGACCTGATT ATTGAATCTGCAAACACGTCGTATACCAACGCCTGAGCCCTAACTATTACTCTCCTAGCCACCTCTTTAA CTGCTGTCTACAGCACACGAATTATTTTCTACGTCTTAATAGGACAACCTCGATATTCTCCACTAACCCC AATTAATGAAAATAACCCCCAACTGCTTAATTCAATTAAACGCCTTCTTATTGGAAGTATTGTTGCAGGG TTTATCCTCTCATACAACATCCCACCTATGAATATTCCAGTCCTAACCATACCTACTTACCTAAAACTTA CTGCACTATTAGTAACCATTCTAGGGTTTGTTATTGCTATAGAACTAAACTCAATAACCCTTTATCTAAA GACCAAAATATACTCAAACACATCAAAATTTTCAGTCATACTAGGCTATTTTCCCACTATCATTCACCGA TTTAATCCTCATCTTAATCTTATGATAAGCCAAAAACTCTCATCAACTCTATTAGACCTAATGTGGTTAG AAAAATCTATCCCCAAACTTACCACTAACTTTCACTCAACAGCCTCTACCATAACCTCTAATCAGAAAGG TCTCATCAAATTATACTTTTTATCATTCTTAACTTCAATACTCCTAGCAGTCACAGTCGTATTCTATTAC CACGCGTAATTTCAATCACAATAAAAATACTAACAAACAACGACCAGCCAGCTACAACCATTAATCAACT TCCACAATTATACATAGCTGCCACCCCTATTGAATCTTCACGAATTAACCCCAACTCATCCCCCTCAAAC ACCATTCAGTTTCCCGAATCCTTAAATTCAATTACAACTTCTACTTCATCATATAAAACTATAAAAACAA CAATTAAAAATTCCACTAAAAACCCTAATAATAAAACCCCCCAAATAACCACACTTGACCCTCATGTTTC CGGGTACTCCTCTGTCGCCATAGCCGTAGTATAACCAAACACCACCAACATTCCTCCCAAGTAAATTAAG AATACTATTAAACCTAGAAAAGACCCTCCAAAATATAACACAACCCCACATCCAATTCCCCCACTAATAA TTAACCCTAAACCCCCATAAATAGGAGAAGGCTTTGAAGAAAATCCTACAAAACCTAAAACAAAAAGTAT ACTTAATAAGTACGCTATATATGCCATTATTTTTACATGGAATTTAACCATGACTAATGACATGAAAAAT CATCGTTGTTATTCAACTATAAAAACACTAATGACAAACACTCGCAAAACCCATCCTTTAATTAAAATCA TTAACCACTCTTTTATTGATTTACCTGCACCTTCCAATATTTCCGCATGATGAAACTTTGGATCCCTACT AGGCCTCTGCCTAGCCATCCAAATCCTCACAGGATTATTTCTAGCAATACATTACACATCTGACACCACA ACAGCCTTCTCATCAGTTACCCATATCTGCCGAGACGTGAATTACGGCTGACTTATCCGCTACATACATG CCAACGGTGCATCTATGTTTTTTATCTGCCTCTTTCTTCATGTAGGCCGAGGATTATACTACGGCTCATA CACTTACTTTGAAACATGAAACATTGGAGTTGTCCTTTTATTCGTAGTAATAGCCACAGCTTTCATAGGC TATGTCCTCCCTTGAGGTCAAATATCATTCTGAGGAGCAACCGTAATTACTAATCTTTTATCTGCCATCC CATACATCGGTACAACCTTAGTAGAATGAATTTGAGGTGGTTTCTCAGTAGACAAAGCCACTCTAACACG ATTTTTCGCATTCCACTTTGTTCTTCCATTTATCGTTGCAGCCCTAGTCATAGTCCACCTTCTTTTCCTC CATGAAACCGGATCAAACAACCCCTCAGGCCTTATTTCTGACTCAGACAAAATTCCTTTTCACCCATATT ACACCATCAAAGATATCCTTGGAGTCCTTCTTCTTATTATAGCCCTAATAATTCTAGTCCTATTTTCACC TGACCTTCTAGGAGACCCCGACAACTATATACCCGCAAATCCTTTAAACACTCCACCCCACATCAAACCA GAGTGATACTTCTTGTTTGCCTACGCTATCCTACGATCTATCCCCAACAAACTGGGAGGTGTCTTAGCCC TAGTCTTTTCAATCCTCATTCTAATGCTTTTCCCACTACTTCATGTATCCAAGCAACGCAGTATAATATT CCGACCACTAAGCCAATGCGTGTTCTGATTCCTAGTAGCAGACCTACTTACATTAACCTGAATCGGAGGA CAACCTGTTGAACACCCATTCATCATTATTGGTCAATTAGCATCAATACTTTATTTCACTATTATTCTCT TAATACTACCAACCGTCAGCCTAATCGAAAATAAACTTCTTAAATGAAGAGCCCTAATAGTATAAAACAT TACTTTGGTCTTGTAAACCAAAAATGAAGCTATGGACTTCTTAGAGCAACCTATCAGGGAAGAAAATTTG CTTTCCACCTTCAACTCCCAAAGCTGATATTCCTTACTTAAACTATTCCCTGCACTCGTCCAATCACTTA AATATTGACTCTTATGTCCCTATCGGCTTTCATCCAACAACGCACCTATGTATATCGTGCATTAATTGCA CCTCCACATTAAGCCATTATTAATCCATGTACATAGGACATTATATGTTTAATCAACATTAATAATACTC TCCCCATGCATATAAGCACGTCCATAATACTAACATAGTACATAATACATTACCCCAGCCCGCCCACATA AATGCTCGTCAATACGGCAGTGATCTTCCAACGAACATGGTTTTTAGTACATAGCACATTCATATCACTG GCGGTACATACCACATTCAGTCATAAATCCTTCTCGATCCAAATGACTATCCCCTACCAATGTTGGTCTC ATAATCTACCAACCTCCGTGAAACCATCTACTCGCCCACTCCGTGTCCCTCTTCTTGCTCTGATCCCATT TAACTTGGGGGTAGCTAACAATGATCTTTATCTGGCATCTGGTTCCTACCTCAGGGCCATAGACTGCATA ATCGCCCACTCGTTCCCCTTAAATAAGACATCACGATGGATTAGTTCCATTCTAGCCCGTGACCCAACAT AACTGCACTGTCATGCCTTTAGTGGTTTTATTTTTTGGGGGATGCAGGGACTCACCATTGGCCGTCAGAG GCCTCGTTCCATTCAATTCAATTGTAGCTGGACTTATTGGTCAATATTCTCGCTTTACATATTACTATCT GCCATAGTCGGGCTTAATGCTCGATAGACAAAAAAAAAGTTAAAACAGAAATTCCACAGTAGATTCAAAC GCAAAAACAAACGTTCAATCAATTATTTTTTTTAGAACCCATATATTTATTTATCTGCTTAAAATTTTAT TAACTTCTTCCCCAGTAGTTTAACATTCATAAAATAGCTCTAATTAATCCAAACTATATACAGATAACCA TTATACTATCACTACACCAATAATACTTACATATAACTCTGTTTACCAAATCCTATATAAGCATGACCCA TAAAATCCCTAACATT
Contact: Vadim E. Fraifeld, MD, PhD
Head: Lab for the Biology of Aging, The Shraga Segal Department of Microbiology, Immunology and Genetics, Faculty of Health Sciences, Ben-Gurion University of the Negev
P.O. Box 653, Beer-Sheva 8410501, Israel
Email:
Head: Lab for the Biology of Aging, The Shraga Segal Department of Microbiology, Immunology and Genetics, Faculty of Health Sciences, Ben-Gurion University of the Negev
P.O. Box 653, Beer-Sheva 8410501, Israel
Email:
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If you would like to cite this database please use:
Toren D, Barzilay T, Tacutu R, Lehmann G, Muradian KK, Fraifeld VE. MitoAge: a database for comparative analysis of mitochondrial DNA, with a special focus on animal longevity. Nucleic Acids Res. 2016; 44(D1):D1262-5.
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