Viewing data for Apalone spinifera
| Scientific name | Apalone spinifera |
| Common name | Spiny softshell turtle |
| Maximum lifespan | 25.20 years (Apalone spinifera@AnAge) |
| Total mtDNA (size: 16749 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 6568 | 10181 | 4543 | 2025 | 4231 | 5950 |
| Base content per 1 kb (bases) | 392 | 608 | 271 | 121 | 253 | 355 |
| Base content (%) | 39.2% | 60.8% | ||||
| Total protein-coding genes (size: 11318 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 4578 | 6740 | 3321 | 1257 | 2814 | 3926 |
| Base content per 1 kb (bases) | 404 | 596 | 293 | 111 | 249 | 347 |
| Base content (%) | 40.4% | 59.6% | ||||
| D-loop (size: 1234 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 378 | 856 | 264 | 114 | 446 | 410 |
| Base content per 1 kb (bases) | 306 | 694 | 214 | 92 | 361 | 332 |
| Base content (%) | 30.6% | 69.4% | ||||
| Total tRNA-coding genes (size: 1545 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 588 | 957 | 354 | 234 | 414 | 543 |
| Base content per 1 kb (bases) | 381 | 619 | 229 | 151 | 268 | 351 |
| Base content (%) | 38.1% | 61.9% | ||||
| Total rRNA-coding genes (size: 2584 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 1004 | 1580 | 589 | 415 | 544 | 1036 |
| Base content per 1 kb (bases) | 389 | 611 | 228 | 161 | 211 | 401 |
| Base content (%) | 38.9% | 61.1% | ||||
| 12S rRNA gene (size: 970 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 391 | 579 | 230 | 161 | 206 | 373 |
| Base content per 1 kb (bases) | 403 | 597 | 237 | 166 | 212 | 385 |
| Base content (%) | 40.3% | 59.7% | ||||
| 16S rRNA gene (size: 1614 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 613 | 1001 | 359 | 254 | 338 | 663 |
| Base content per 1 kb (bases) | 380 | 620 | 222 | 157 | 209 | 411 |
| Base content (%) | 38.0% | 62.0% | ||||
| ATP6 (size: 684 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 283 | 401 | 219 | 64 | 162 | 239 |
| Base content per 1 kb (bases) | 414 | 586 | 320 | 94 | 237 | 349 |
| Base content (%) | 41.4% | 58.6% | ||||
| ATP8 (size: 165 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 55 | 110 | 45 | 10 | 40 | 70 |
| Base content per 1 kb (bases) | 333 | 667 | 273 | 61 | 242 | 424 |
| Base content (%) | 33.3% | 66.7% | ||||
| COX1 (size: 1545 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 662 | 883 | 401 | 261 | 432 | 451 |
| Base content per 1 kb (bases) | 428 | 572 | 260 | 169 | 280 | 292 |
| Base content (%) | 42.8% | 57.2% | ||||
| COX2 (size: 687 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 265 | 422 | 179 | 86 | 172 | 250 |
| Base content per 1 kb (bases) | 386 | 614 | 261 | 125 | 250 | 364 |
| Base content (%) | 38.6% | 61.4% | ||||
| COX3 (size: 784 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 340 | 444 | 223 | 117 | 196 | 248 |
| Base content per 1 kb (bases) | 434 | 566 | 284 | 149 | 250 | 316 |
| Base content (%) | 43.4% | 56.6% | ||||
| CYTB (size: 1131 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 465 | 666 | 330 | 135 | 303 | 363 |
| Base content per 1 kb (bases) | 411 | 589 | 292 | 119 | 268 | 321 |
| Base content (%) | 41.1% | 58.9% | ||||
| ND1 (size: 971 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 397 | 574 | 290 | 107 | 259 | 315 |
| Base content per 1 kb (bases) | 409 | 591 | 299 | 110 | 267 | 324 |
| Base content (%) | 40.9% | 59.1% | ||||
| ND2 (size: 1039 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 394 | 645 | 309 | 85 | 247 | 398 |
| Base content per 1 kb (bases) | 379 | 621 | 297 | 82 | 238 | 383 |
| Base content (%) | 37.9% | 62.1% | ||||
| ND3 (size: 350 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 133 | 217 | 99 | 34 | 96 | 121 |
| Base content per 1 kb (bases) | 380 | 620 | 283 | 97 | 274 | 346 |
| Base content (%) | 38.0% | 62.0% | ||||
| ND4 (size: 1381 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 541 | 840 | 415 | 126 | 338 | 502 |
| Base content per 1 kb (bases) | 392 | 608 | 301 | 91 | 245 | 364 |
| Base content (%) | 39.2% | 60.8% | ||||
| ND4L (size: 297 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 121 | 176 | 96 | 25 | 79 | 97 |
| Base content per 1 kb (bases) | 407 | 593 | 323 | 84 | 266 | 327 |
| Base content (%) | 40.7% | 59.3% | ||||
| ND5 (size: 1779 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 724 | 1055 | 548 | 176 | 428 | 627 |
| Base content per 1 kb (bases) | 407 | 593 | 308 | 99 | 241 | 352 |
| Base content (%) | 40.7% | 59.3% | ||||
| ND6 (size: 528 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 203 | 325 | 170 | 33 | 69 | 256 |
| Base content per 1 kb (bases) | 384 | 616 | 322 | 63 | 131 | 485 |
| Base content (%) | 38.4% | 61.6% | ||||
| ATP6 (size: 684 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
Amino acid frequencies:
Glycine (Gly, G)
n = 8 (3.52%) 
Alanine (Ala, A)
n = 12 (5.29%) 
Serine (Ser, S)
n = 14 (6.17%) 
Threonine (Thr, T)
n = 27 (11.89%) 
Cysteine (Cys, C)
n = 0 (0%) 
Valine (Val, V)
n = 6 (2.64%) 
Leucine (Leu, L)
n = 54 (23.79%) 
Isoleucine (Ile, I)
n = 23 (10.13%) 
Methionine (Met, M)
n = 15 (6.61%) 
Proline (Pro, P)
n = 17 (7.49%) 
Phenylalanine (Phe, F)
n = 5 (2.2%) 
Tyrosine (Tyr, Y)
n = 3 (1.32%) 
Tryptophan (Trp, W)
n = 5 (2.2%) 
Aspartic acid (Asp, D)
n = 1 (0.44%) 
Glutamic acid (Glu, E)
n = 4 (1.76%) 
Asparagine (Asn, N)
n = 11 (4.85%) 
Glutamine (Gln, Q)
n = 11 (4.85%) 
Histidine (His, H)
n = 3 (1.32%) 
Lysine (Lys, K)
n = 3 (1.32%) 
Arginine (Arg, R)
n = 5 (2.2%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 6 | 17 | 12 | 1 | 7 | 33 | 4 | 8 | 11 | 0 | 1 | 1 | 4 | 0 | 2 | 3 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 3 | 0 | 0 | 2 | 6 | 4 | 0 | 0 | 2 | 4 | 2 | 3 | 4 | 10 | 0 | 4 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 10 | 13 | 0 | 1 | 4 | 5 | 1 | 0 | 3 | 0 | 3 | 1 | 1 | 4 | 7 | 1 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 2 | 4 | 0 | 0 | 1 | 3 | 0 | 0 | 1 | 4 | 0 | 0 | 0 | 1 | 0 | 4 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 31 | 81 | 82 | 34 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 21 | 67 | 37 | 103 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 12 | 71 | 120 | 25 | ||||||||||||
| ATP8 (size: 165 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: MPQLNPNPWLSILLMTWLAYIAIYQPKITTFLQTNSITHNYKYSNTNPWNWPWI* | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 0 (0%)
Alanine (Ala, A)
n = 2 (3.7%)
Serine (Ser, S)
n = 3 (5.56%)
Threonine (Thr, T)
n = 6 (11.11%)
Cysteine (Cys, C)
n = 0 (0%)
Valine (Val, V)
n = 0 (0%)
Leucine (Leu, L)
n = 6 (11.11%)
Isoleucine (Ile, I)
n = 6 (11.11%)
Methionine (Met, M)
n = 2 (3.7%)
Proline (Pro, P)
n = 6 (11.11%)
Phenylalanine (Phe, F)
n = 1 (1.85%)
Tyrosine (Tyr, Y)
n = 4 (7.41%)
Tryptophan (Trp, W)
n = 5 (9.26%)
Aspartic acid (Asp, D)
n = 0 (0%)
Glutamic acid (Glu, E)
n = 0 (0%)
Asparagine (Asn, N)
n = 7 (12.96%)
Glutamine (Gln, Q)
n = 3 (5.56%)
Histidine (His, H)
n = 1 (1.85%)
Lysine (Lys, K)
n = 2 (3.7%)
Arginine (Arg, R)
n = 0 (0%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 2 | 4 | 0 | 0 | 0 | 3 | 0 | 3 | 3 | 0 | 0 | 0 | 0 | 0 | 1 | 0 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 2 | 0 | 0 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 1 | 1 | 4 | 0 | 1 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 0 | 5 | 0 | 0 | 1 | 1 | 0 | 0 | 1 | 1 | 3 | 0 | 0 | 2 | 5 | 0 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 1 | 0 | 0 | 0 | 0 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 5 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 2 | 13 | 24 | 16 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 6 | 16 | 18 | 15 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 2 | 16 | 28 | 9 | ||||||||||||
| COX1 (size: 1545 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 46 (8.95%)
Alanine (Ala, A)
n = 41 (7.98%)
Serine (Ser, S)
n = 35 (6.81%)
Threonine (Thr, T)
n = 40 (7.78%)
Cysteine (Cys, C)
n = 2 (0.39%)
Valine (Val, V)
n = 37 (7.2%)
Leucine (Leu, L)
n = 61 (11.87%)
Isoleucine (Ile, I)
n = 37 (7.2%)
Methionine (Met, M)
n = 31 (6.03%)
Proline (Pro, P)
n = 27 (5.25%)
Phenylalanine (Phe, F)
n = 38 (7.39%)
Tyrosine (Tyr, Y)
n = 17 (3.31%)
Tryptophan (Trp, W)
n = 17 (3.31%)
Aspartic acid (Asp, D)
n = 14 (2.72%)
Glutamic acid (Glu, E)
n = 9 (1.75%)
Asparagine (Asn, N)
n = 16 (3.11%)
Glutamine (Gln, Q)
n = 8 (1.56%)
Histidine (His, H)
n = 20 (3.89%)
Lysine (Lys, K)
n = 9 (1.75%)
Arginine (Arg, R)
n = 9 (1.75%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 17 | 20 | 24 | 4 | 7 | 22 | 8 | 18 | 8 | 0 | 4 | 7 | 22 | 4 | 13 | 25 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 7 | 2 | 0 | 11 | 15 | 15 | 0 | 11 | 12 | 14 | 9 | 4 | 8 | 14 | 1 | 8 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 13 | 19 | 0 | 4 | 4 | 20 | 1 | 0 | 6 | 5 | 12 | 1 | 2 | 3 | 13 | 11 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 9 | 9 | 0 | 6 | 8 | 9 | 0 | 2 | 0 | 7 | 0 | 1 | 0 | 0 | 0 | 16 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 147 | 105 | 140 | 123 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 81 | 137 | 93 | 204 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 33 | 159 | 218 | 105 | ||||||||||||
| COX2 (size: 687 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 8 (3.51%)
Alanine (Ala, A)
n = 10 (4.39%)
Serine (Ser, S)
n = 14 (6.14%)
Threonine (Thr, T)
n = 19 (8.33%)
Cysteine (Cys, C)
n = 2 (0.88%)
Valine (Val, V)
n = 12 (5.26%)
Leucine (Leu, L)
n = 27 (11.84%)
Isoleucine (Ile, I)
n = 21 (9.21%)
Methionine (Met, M)
n = 18 (7.89%)
Proline (Pro, P)
n = 14 (6.14%)
Phenylalanine (Phe, F)
n = 9 (3.95%)
Tyrosine (Tyr, Y)
n = 9 (3.95%)
Tryptophan (Trp, W)
n = 5 (2.19%)
Aspartic acid (Asp, D)
n = 9 (3.95%)
Glutamic acid (Glu, E)
n = 15 (6.58%)
Asparagine (Asn, N)
n = 8 (3.51%)
Glutamine (Gln, Q)
n = 7 (3.07%)
Histidine (His, H)
n = 11 (4.82%)
Lysine (Lys, K)
n = 4 (1.75%)
Arginine (Arg, R)
n = 6 (2.63%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 6 | 15 | 17 | 2 | 2 | 10 | 2 | 11 | 7 | 0 | 2 | 2 | 7 | 1 | 3 | 6 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 1 | 0 | 2 | 0 | 5 | 5 | 0 | 2 | 1 | 3 | 2 | 0 | 3 | 11 | 0 | 6 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 5 | 8 | 0 | 0 | 3 | 8 | 1 | 0 | 2 | 4 | 5 | 1 | 0 | 1 | 7 | 6 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 5 | 15 | 0 | 3 | 6 | 3 | 1 | 1 | 1 | 4 | 0 | 0 | 0 | 1 | 0 | 4 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 54 | 54 | 72 | 49 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 23 | 55 | 64 | 87 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 9 | 70 | 114 | 36 | ||||||||||||
| COX3 (size: 784 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 19 (7.31%)
Alanine (Ala, A)
n = 24 (9.23%)
Serine (Ser, S)
n = 13 (5.0%)
Threonine (Thr, T)
n = 26 (10.0%)
Cysteine (Cys, C)
n = 2 (0.77%)
Valine (Val, V)
n = 16 (6.15%)
Leucine (Leu, L)
n = 31 (11.92%)
Isoleucine (Ile, I)
n = 16 (6.15%)
Methionine (Met, M)
n = 12 (4.62%)
Proline (Pro, P)
n = 12 (4.62%)
Phenylalanine (Phe, F)
n = 22 (8.46%)
Tyrosine (Tyr, Y)
n = 11 (4.23%)
Tryptophan (Trp, W)
n = 12 (4.62%)
Aspartic acid (Asp, D)
n = 4 (1.54%)
Glutamic acid (Glu, E)
n = 7 (2.69%)
Asparagine (Asn, N)
n = 4 (1.54%)
Glutamine (Gln, Q)
n = 7 (2.69%)
Histidine (His, H)
n = 16 (6.15%)
Lysine (Lys, K)
n = 2 (0.77%)
Arginine (Arg, R)
n = 5 (1.92%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 6 | 10 | 11 | 0 | 2 | 22 | 2 | 5 | 7 | 0 | 3 | 3 | 9 | 1 | 5 | 17 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 1 | 1 | 1 | 3 | 11 | 10 | 0 | 2 | 8 | 9 | 0 | 1 | 0 | 11 | 0 | 2 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 7 | 17 | 0 | 1 | 1 | 7 | 0 | 1 | 3 | 6 | 5 | 0 | 0 | 1 | 3 | 3 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 13 | 7 | 0 | 2 | 2 | 2 | 0 | 0 | 0 | 4 | 1 | 0 | 0 | 0 | 0 | 12 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 70 | 66 | 64 | 61 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 42 | 71 | 51 | 97 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 5 | 86 | 133 | 37 | ||||||||||||
| CYTB (size: 1131 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 25 (6.65%)
Alanine (Ala, A)
n = 22 (5.85%)
Serine (Ser, S)
n = 26 (6.91%)
Threonine (Thr, T)
n = 29 (7.71%)
Cysteine (Cys, C)
n = 2 (0.53%)
Valine (Val, V)
n = 15 (3.99%)
Leucine (Leu, L)
n = 56 (14.89%)
Isoleucine (Ile, I)
n = 36 (9.57%)
Methionine (Met, M)
n = 19 (5.05%)
Proline (Pro, P)
n = 23 (6.12%)
Phenylalanine (Phe, F)
n = 26 (6.91%)
Tyrosine (Tyr, Y)
n = 15 (3.99%)
Tryptophan (Trp, W)
n = 11 (2.93%)
Aspartic acid (Asp, D)
n = 7 (1.86%)
Glutamic acid (Glu, E)
n = 4 (1.06%)
Asparagine (Asn, N)
n = 23 (6.12%)
Glutamine (Gln, Q)
n = 9 (2.39%)
Histidine (His, H)
n = 11 (2.93%)
Lysine (Lys, K)
n = 9 (2.39%)
Arginine (Arg, R)
n = 8 (2.13%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 11 | 25 | 15 | 7 | 9 | 29 | 1 | 10 | 8 | 1 | 1 | 2 | 11 | 1 | 5 | 21 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 4 | 1 | 1 | 4 | 11 | 7 | 0 | 1 | 7 | 13 | 4 | 2 | 5 | 14 | 2 | 3 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 10 | 16 | 0 | 5 | 6 | 14 | 0 | 1 | 0 | 5 | 10 | 0 | 0 | 10 | 13 | 3 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 8 | 3 | 1 | 2 | 5 | 9 | 0 | 0 | 1 | 6 | 1 | 0 | 0 | 1 | 0 | 11 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 73 | 97 | 117 | 90 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 47 | 99 | 79 | 152 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 15 | 134 | 167 | 61 | ||||||||||||
| ND1 (size: 971 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 16 (4.97%)
Alanine (Ala, A)
n = 20 (6.21%)
Serine (Ser, S)
n = 26 (8.07%)
Threonine (Thr, T)
n = 24 (7.45%)
Cysteine (Cys, C)
n = 1 (0.31%)
Valine (Val, V)
n = 10 (3.11%)
Leucine (Leu, L)
n = 58 (18.01%)
Isoleucine (Ile, I)
n = 24 (7.45%)
Methionine (Met, M)
n = 25 (7.76%)
Proline (Pro, P)
n = 24 (7.45%)
Phenylalanine (Phe, F)
n = 22 (6.83%)
Tyrosine (Tyr, Y)
n = 13 (4.04%)
Tryptophan (Trp, W)
n = 9 (2.8%)
Aspartic acid (Asp, D)
n = 4 (1.24%)
Glutamic acid (Glu, E)
n = 11 (3.42%)
Asparagine (Asn, N)
n = 15 (4.66%)
Glutamine (Gln, Q)
n = 6 (1.86%)
Histidine (His, H)
n = 1 (0.31%)
Lysine (Lys, K)
n = 7 (2.17%)
Arginine (Arg, R)
n = 7 (2.17%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 7 | 17 | 19 | 3 | 6 | 32 | 2 | 14 | 6 | 0 | 0 | 2 | 8 | 0 | 5 | 17 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 6 | 0 | 1 | 3 | 10 | 6 | 1 | 4 | 6 | 6 | 0 | 3 | 5 | 16 | 0 | 0 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 14 | 10 | 0 | 5 | 8 | 12 | 0 | 0 | 1 | 2 | 11 | 1 | 1 | 2 | 13 | 0 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 1 | 10 | 1 | 0 | 4 | 7 | 0 | 0 | 0 | 7 | 0 | 0 | 0 | 0 | 0 | 8 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 61 | 81 | 96 | 85 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 34 | 93 | 57 | 139 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 12 | 116 | 161 | 34 | ||||||||||||
| ND2 (size: 1039 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 13 (3.77%)
Alanine (Ala, A)
n = 27 (7.83%)
Serine (Ser, S)
n = 30 (8.7%)
Threonine (Thr, T)
n = 43 (12.46%)
Cysteine (Cys, C)
n = 0 (0%)
Valine (Val, V)
n = 2 (0.58%)
Leucine (Leu, L)
n = 63 (18.26%)
Isoleucine (Ile, I)
n = 38 (11.01%)
Methionine (Met, M)
n = 25 (7.25%)
Proline (Pro, P)
n = 16 (4.64%)
Phenylalanine (Phe, F)
n = 9 (2.61%)
Tyrosine (Tyr, Y)
n = 9 (2.61%)
Tryptophan (Trp, W)
n = 10 (2.9%)
Aspartic acid (Asp, D)
n = 1 (0.29%)
Glutamic acid (Glu, E)
n = 5 (1.45%)
Asparagine (Asn, N)
n = 18 (5.22%)
Glutamine (Gln, Q)
n = 13 (3.77%)
Histidine (His, H)
n = 7 (2.03%)
Lysine (Lys, K)
n = 13 (3.77%)
Arginine (Arg, R)
n = 4 (1.16%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 17 | 21 | 24 | 6 | 10 | 32 | 2 | 13 | 13 | 0 | 0 | 0 | 2 | 0 | 4 | 5 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 1 | 0 | 0 | 1 | 11 | 14 | 1 | 3 | 1 | 9 | 0 | 0 | 3 | 13 | 0 | 4 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 17 | 22 | 0 | 2 | 7 | 15 | 0 | 2 | 4 | 1 | 8 | 0 | 0 | 3 | 15 | 1 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 6 | 5 | 0 | 0 | 1 | 13 | 0 | 0 | 0 | 4 | 0 | 0 | 0 | 0 | 0 | 10 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 48 | 90 | 143 | 65 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 33 | 110 | 66 | 137 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 4 | 109 | 189 | 44 | ||||||||||||
| ND3 (size: 1039 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 13 (3.77%)
Alanine (Ala, A)
n = 27 (7.83%)
Serine (Ser, S)
n = 30 (8.7%)
Threonine (Thr, T)
n = 43 (12.46%)
Cysteine (Cys, C)
n = 0 (0%)
Valine (Val, V)
n = 2 (0.58%)
Leucine (Leu, L)
n = 63 (18.26%)
Isoleucine (Ile, I)
n = 38 (11.01%)
Methionine (Met, M)
n = 25 (7.25%)
Proline (Pro, P)
n = 16 (4.64%)
Phenylalanine (Phe, F)
n = 9 (2.61%)
Tyrosine (Tyr, Y)
n = 9 (2.61%)
Tryptophan (Trp, W)
n = 10 (2.9%)
Aspartic acid (Asp, D)
n = 1 (0.29%)
Glutamic acid (Glu, E)
n = 5 (1.45%)
Asparagine (Asn, N)
n = 18 (5.22%)
Glutamine (Gln, Q)
n = 13 (3.77%)
Histidine (His, H)
n = 7 (2.03%)
Lysine (Lys, K)
n = 13 (3.77%)
Arginine (Arg, R)
n = 4 (1.16%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 17 | 21 | 24 | 6 | 10 | 32 | 2 | 13 | 13 | 0 | 0 | 0 | 2 | 0 | 4 | 5 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 1 | 0 | 0 | 1 | 11 | 14 | 1 | 3 | 1 | 9 | 0 | 0 | 3 | 13 | 0 | 4 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 17 | 22 | 0 | 2 | 7 | 15 | 0 | 2 | 4 | 1 | 8 | 0 | 0 | 3 | 15 | 1 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 6 | 5 | 0 | 0 | 1 | 13 | 0 | 0 | 0 | 4 | 0 | 0 | 0 | 0 | 0 | 10 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 48 | 90 | 143 | 65 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 33 | 110 | 66 | 137 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 4 | 109 | 189 | 44 | ||||||||||||
| ND4 (size: 1381 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 18 (3.92%)
Alanine (Ala, A)
n = 24 (5.23%)
Serine (Ser, S)
n = 36 (7.84%)
Threonine (Thr, T)
n = 59 (12.85%)
Cysteine (Cys, C)
n = 5 (1.09%)
Valine (Val, V)
n = 7 (1.53%)
Leucine (Leu, L)
n = 90 (19.61%)
Isoleucine (Ile, I)
n = 43 (9.37%)
Methionine (Met, M)
n = 34 (7.41%)
Proline (Pro, P)
n = 24 (5.23%)
Phenylalanine (Phe, F)
n = 16 (3.49%)
Tyrosine (Tyr, Y)
n = 9 (1.96%)
Tryptophan (Trp, W)
n = 13 (2.83%)
Aspartic acid (Asp, D)
n = 3 (0.65%)
Glutamic acid (Glu, E)
n = 10 (2.18%)
Asparagine (Asn, N)
n = 20 (4.36%)
Glutamine (Gln, Q)
n = 14 (3.05%)
Histidine (His, H)
n = 15 (3.27%)
Lysine (Lys, K)
n = 10 (2.18%)
Arginine (Arg, R)
n = 10 (2.18%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 14 | 29 | 31 | 10 | 3 | 56 | 3 | 18 | 14 | 0 | 0 | 2 | 5 | 0 | 5 | 11 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 3 | 3 | 2 | 4 | 12 | 8 | 0 | 3 | 5 | 7 | 3 | 1 | 5 | 18 | 0 | 5 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 24 | 29 | 1 | 3 | 3 | 23 | 0 | 0 | 7 | 5 | 4 | 1 | 0 | 1 | 19 | 2 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 13 | 10 | 0 | 0 | 3 | 10 | 0 | 1 | 2 | 7 | 0 | 0 | 0 | 0 | 0 | 12 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 62 | 135 | 173 | 90 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 53 | 136 | 81 | 190 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 11 | 144 | 248 | 57 | ||||||||||||
| ND4L (size: 297 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 2 (2.04%)
Alanine (Ala, A)
n = 5 (5.1%)
Serine (Ser, S)
n = 14 (14.29%)
Threonine (Thr, T)
n = 6 (6.12%)
Cysteine (Cys, C)
n = 3 (3.06%)
Valine (Val, V)
n = 3 (3.06%)
Leucine (Leu, L)
n = 22 (22.45%)
Isoleucine (Ile, I)
n = 4 (4.08%)
Methionine (Met, M)
n = 9 (9.18%)
Proline (Pro, P)
n = 4 (4.08%)
Phenylalanine (Phe, F)
n = 7 (7.14%)
Tyrosine (Tyr, Y)
n = 1 (1.02%)
Tryptophan (Trp, W)
n = 0 (0%)
Aspartic acid (Asp, D)
n = 0 (0%)
Glutamic acid (Glu, E)
n = 2 (2.04%)
Asparagine (Asn, N)
n = 5 (5.1%)
Glutamine (Gln, Q)
n = 4 (4.08%)
Histidine (His, H)
n = 4 (4.08%)
Lysine (Lys, K)
n = 1 (1.02%)
Arginine (Arg, R)
n = 2 (2.04%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 0 | 4 | 8 | 2 | 2 | 14 | 0 | 3 | 4 | 0 | 0 | 2 | 1 | 0 | 1 | 6 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 1 | 1 | 2 | 1 | 1 | 3 | 0 | 0 | 1 | 1 | 0 | 0 | 1 | 3 | 0 | 1 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 3 | 2 | 0 | 0 | 4 | 6 | 1 | 0 | 3 | 0 | 1 | 0 | 1 | 0 | 5 | 1 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 3 | 2 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 2 | 0 | 0 | 0 | 1 | 0 | 0 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 12 | 32 | 28 | 27 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 10 | 26 | 18 | 45 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 3 | 38 | 51 | 7 | ||||||||||||
| ND5 (size: 1779 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 25 (4.22%)
Alanine (Ala, A)
n = 40 (6.76%)
Serine (Ser, S)
n = 55 (9.29%)
Threonine (Thr, T)
n = 67 (11.32%)
Cysteine (Cys, C)
n = 6 (1.01%)
Valine (Val, V)
n = 13 (2.2%)
Leucine (Leu, L)
n = 84 (14.19%)
Isoleucine (Ile, I)
n = 58 (9.8%)
Methionine (Met, M)
n = 43 (7.26%)
Proline (Pro, P)
n = 29 (4.9%)
Phenylalanine (Phe, F)
n = 33 (5.57%)
Tyrosine (Tyr, Y)
n = 13 (2.2%)
Tryptophan (Trp, W)
n = 13 (2.2%)
Aspartic acid (Asp, D)
n = 7 (1.18%)
Glutamic acid (Glu, E)
n = 11 (1.86%)
Asparagine (Asn, N)
n = 30 (5.07%)
Glutamine (Gln, Q)
n = 20 (3.38%)
Histidine (His, H)
n = 14 (2.36%)
Lysine (Lys, K)
n = 23 (3.89%)
Arginine (Arg, R)
n = 8 (1.35%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 15 | 43 | 39 | 10 | 14 | 43 | 2 | 13 | 19 | 1 | 4 | 3 | 6 | 0 | 8 | 25 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 4 | 0 | 6 | 3 | 21 | 16 | 0 | 0 | 9 | 13 | 3 | 2 | 5 | 22 | 0 | 9 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 26 | 30 | 2 | 1 | 16 | 28 | 0 | 1 | 9 | 6 | 7 | 2 | 2 | 6 | 24 | 4 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 10 | 10 | 1 | 2 | 5 | 22 | 1 | 0 | 4 | 4 | 0 | 0 | 0 | 1 | 0 | 11 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 96 | 140 | 231 | 126 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 62 | 181 | 119 | 231 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 18 | 227 | 277 | 71 | ||||||||||||
| ND6 (size: 528 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 25 (14.29%)
Alanine (Ala, A)
n = 8 (4.57%)
Serine (Ser, S)
n = 9 (5.14%)
Threonine (Thr, T)
n = 2 (1.14%)
Cysteine (Cys, C)
n = 5 (2.86%)
Valine (Val, V)
n = 31 (17.71%)
Leucine (Leu, L)
n = 23 (13.14%)
Isoleucine (Ile, I)
n = 10 (5.71%)
Methionine (Met, M)
n = 9 (5.14%)
Proline (Pro, P)
n = 4 (2.29%)
Phenylalanine (Phe, F)
n = 17 (9.71%)
Tyrosine (Tyr, Y)
n = 13 (7.43%)
Tryptophan (Trp, W)
n = 5 (2.86%)
Aspartic acid (Asp, D)
n = 7 (4.0%)
Glutamic acid (Glu, E)
n = 2 (1.14%)
Asparagine (Asn, N)
n = 2 (1.14%)
Glutamine (Gln, Q)
n = 0 (0%)
Histidine (His, H)
n = 0 (0%)
Lysine (Lys, K)
n = 0 (0%)
Arginine (Arg, R)
n = 3 (1.71%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 10 | 0 | 3 | 0 | 0 | 0 | 0 | 5 | 0 | 0 | 15 | 2 | 2 | 12 | 17 | 0 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 6 | 5 | 0 | 5 | 0 | 1 | 2 | 12 | 1 | 2 | 10 | 2 | 0 | 2 | 0 | 0 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 0 | 0 | 2 | 6 | 0 | 0 | 1 | 2 | 0 | 13 | 0 | 3 | 18 | 2 | 0 | 0 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 0 | 0 | 2 | 6 | 1 | 0 | 0 | 1 | 1 | 1 | 0 | 1 | 0 | 0 | 0 | 2 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 73 | 7 | 26 | 70 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 41 | 21 | 24 | 90 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 56 | 5 | 19 | 96 | ||||||||||||
| Total protein-coding genes (size: 11340 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 209 (5.53%)
Alanine (Ala, A)
n = 241 (6.38%)
Serine (Ser, S)
n = 282 (7.47%)
Threonine (Thr, T)
n = 360 (9.53%)
Cysteine (Cys, C)
n = 29 (0.77%)
Valine (Val, V)
n = 154 (4.08%)
Leucine (Leu, L)
n = 602 (15.94%)
Isoleucine (Ile, I)
n = 328 (8.68%)
Methionine (Met, M)
n = 246 (6.51%)
Proline (Pro, P)
n = 207 (5.48%)
Phenylalanine (Phe, F)
n = 213 (5.64%)
Tyrosine (Tyr, Y)
n = 119 (3.15%)
Tryptophan (Trp, W)
n = 108 (2.86%)
Aspartic acid (Asp, D)
n = 59 (1.56%)
Glutamic acid (Glu, E)
n = 86 (2.28%)
Asparagine (Asn, N)
n = 163 (4.32%)
Glutamine (Gln, Q)
n = 105 (2.78%)
Histidine (His, H)
n = 103 (2.73%)
Lysine (Lys, K)
n = 87 (2.3%)
Arginine (Arg, R)
n = 69 (1.83%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 115 | 213 | 206 | 47 | 67 | 312 | 26 | 124 | 103 | 2 | 30 | 26 | 79 | 19 | 72 | 141 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 40 | 14 | 15 | 40 | 103 | 94 | 4 | 39 | 53 | 84 | 33 | 19 | 40 | 145 | 3 | 44 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 135 | 176 | 5 | 29 | 58 | 143 | 5 | 7 | 40 | 49 | 70 | 10 | 26 | 36 | 127 | 32 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 71 | 81 | 5 | 21 | 38 | 84 | 3 | 6 | 11 | 50 | 2 | 2 | 0 | 6 | 0 | 98 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 749 | 936 | 1233 | 860 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 464 | 1043 | 728 | 1543 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 183 | 1208 | 1787 | 600 | ||||||||||||
>NC_021371.1 Apalone spinifera mitochondrion, complete genome GTTATTGTAGCTTAATACAAAGCATGGCACTGAAGACGCCAAGATGGATATTAACATACCCAAATAACAC AAAGATTTGGTCCTAATCTTAATGTTGCTTTTTACTAAACCTACACATGTAAGTATCAGCAGACCAGTGA AAATGCCCTAAAAGTCACATCAGACAAAAGGAGCTGGTATCAGGCACGCCATGACAGCCCAAAACACCTT GCTTCGCCACACCCCCAAGGGTACTACAACAGTGATTAACATTAAGCAATAAGCATAAGCTTGACTTAGT TATAGTAAATTATACCATAGGGCTGGTAAATCTCGTGCCAGCCACCGCGGTTACACAAGAAGCCCAAAAC AACAACAACACGGCGTAAAATGTGGCTAAATAATAATCTACCAAAACCTAAGGTTAACTATAGCTAAACT GTCATACGTAAAGCATTAATTAACCCCATACGAAAGTAACCTTAGTATACCAGACAACTTGAACCCACGA TCGCTAAGACACAAACTGGGATTAGATACCCCACTATGCTTAGCCCTAAACTTAGATATTTCCAAATACA AAAATATCCGCCAGAAAACTACGAGCAAAACGCTTAAAACTCCAAGGACTTGGCGGTACTTCAAATCCCC CTAGAGGAGCCTGTTCTATAATCGATAATCCACGCTAAACCTCACCATCTTTTGCCAACCCAGCCTATAT ACCACCGTCACAGCTTACCTTGTGAAAGAAAAAAAGTAAGCTAAACAGTTAAAACAACTAGAAAGTCAGG TCAAGGTGTAGCCAATTAAGATGGAAGAAATGGGCTACATTTTCTACAATAGAAATAACCACGAAACAGA ACCATGAAACACGGTCTAAACAAGAAGGATTTAGTAGTAAACTGAGAACAGAGGGCTCAATTTAAAACGG ACCTGAAGTACGCACACACCGCCCGTCACCCCCATCAACAAACACATTAAACTATAAATAATACCACATA AAATAACAGATGGGGTAAGTCGTAACAAGGTAAGTATACCGGAAGGTGTACTTGGACTACAAAATATAGC TTAACCCAAAGCATTCAGCTTACACCTGAAACATACCCACTAAACAGGGTTATTTTGATGCAACAACCAT TAGCTCGATTAACCAAATTTAACCCAACAAACCAAATACTCCACAAAAACTAAATAAAACATTCTTTCAC TTAATCCTAGTATGGGCGACAGAAAAGATAAACGAAGCAATAAAGAACAGTACCGCAAGGGAAAAATGAA AAAAATGAAACACATTTAAGCAAAAAAAAGCAAAGATTAACCCTTGTACCTTTTGCATTATGATTTAGCC AGCAACACCTAAGCAAAGAGAACTAAAGTCTAAAACCCCGAAACTAAGTGAGCTACTTAAGGGCAGCTAC ATCCAACATAAAACTATAATCATCTCTGTGGCAAAAGAGTGACAAGACCTTTAAGTAGAGGTGAAAAGCC TAACGAACTTAGTGATAGCTGGTCGCTCAATAAATGAGTATAAGCTCAACCCTAAACAATTCAAAAAACA ACTAAAAGTTTATAAGAAAAATTTAGGAGCCATTCAATTAGGGTACAGCCTAATTGAAACAGGATAAAAC CTAAAATAAAGGACAAGACACCTAAACCAAAACAAACGTAGGCTTTAAAGCAGCCACCACCAAAAGAAAG CGTCAAAGCCCCACCACTAAAAATATAAACAACAATCAAATCCTTAAACAACACTGAGCCATTCTACTAA AATAGAAGAACTTATGCTAAAATGAGTAACAAGAAGACAAACTTCTCTTTTACGTCAGCCTAAATCAGAA TAGATAAACTACTGATTATTAACAGCCACAATAAAAAACAATAACACTAAACACAACATATAACACAAAC TGTTAACCCAACACAGGAACGTTAAAATAAGAAAGATTAAAATCTGTAAAAGGAACTAAGCAAACAAAGA GCCCGACTGTTTACCAAAAACATAGCCCCTAGCAACAATAAGTATTAGGGGTGATGCCTGCCCAGTGACA CTGTTCAACGGCCGCGGTATCCTAACCGTGCAAAGGTAGCGTAATCACTTGTCTTTTAAATAAAGACTAG TATGAGAAGGCTAAACGAGGCCCTATCTGTCTCTTACAGACAATCAGTGAAATTGATCTCCTCGTGCAAA AGCGAGAATGCAAATATAAGACGAGAAGACCCTGTGGAACTTCAAATAAACTATCACCTAACACCACACT TACCCAAACGGACCTACAGACTAATTAAGTACCTGATATATATTTTTGGTTGGGGCGACCTCGGAGCAAA ACAAAACCTCCGACAAAACAAGATATAACCTTTTACTTAGCCAAACAACTCAAAGTGCCCAAAGCAAAAT GATCCAATATATTTGATCAACGAACCAAGCTACCCCAGGGATAACAGCGCAATCCCGTCATAGAGTCCCT ATCGACGACGGGGTTTACGACCTCGATGTTGGATCAGGACATCCTAATGGTGCAACAGCTATTAAGGGTT CGTTTGTTCAACGATTAAAGTCCCACGTGATCTGAGTTCAGACCGGAGCAATCCAGGTCGGTTTCTATCT ATAACTAAATCTTTTCCAGTACGAAAGGACCGAAAAGATAAGGCCCATGTTACACACCAAGCCTTAAACT CACATTAGTGAACACAACTAAACTAATAACAAGAATCACACCATAACCCGAAATAAGGGCTAATTGGGGT GGCAGAGCCAGGTAAAAATGCAAAAGACCTAAAACCTTTATCCAGGGGTTCAACTCCCCTCCCCAATTAT GTACACCCTACTATCAAACCTGCTGTCCCCTCTAATATACATAATCCCAATCTTAATTGCTGTAGCCTTC TTCACCTTAATTGAACGAAAAATCTTAGGTTATATACAACTACGAAAAGGCCCTAACATCGTCGGCCCCT ACGGCTTACTACAACCTGTAGCTGACGGATTAAAACTATTCACAAAAGAACCAATCTACCCCATAAACTC ATCCCCCACACTATTTACACTCGCCCCAACCTTAGCCCTATTATTAGCCCTATCAATCTGACTACCACTA CCAATACCATTTCCCCTCTCCGACCTCAACCTAGGTCTCCTCTTCTTAATCTCAATTTCTAGCTTTACAG TATATTCAATCATATGATCTGGTTGAGCCTCAAACTCAAAATACGCCCTATGAGGAGCCCTACGAGCAGT AGCACAAACCATCTCCTACGAAGTAACCCTTGGCATCATCCTAATCTCAATAATCCTATTCTCCGGAGGA TTTAACATGCAAACCTTCATAACAACACAAGAACCAATACTACTCGTCTTCTCCTCATGACCATTAATAA TGATATGATACATCTCTACCCTAGCAGAAACAAACCGATCACCATTCGACCTTACAGAAGGCGAATCCGA ACTAGTATCAGGATTCAACGTAGAGTACGCCGCAGGCCCATTCGCACTACTATTCCTAGCGGAATACGCC AATATTCTAATAATAAACATAATCACCACCATCATGTTCCTTAACCCATTCAACACCAACAACCCACCAG AATTACTAACAATTATATTGACCCTAAAAACCATAATACTATCAATGGGTTTCTTATGGGTACGAGCCTC TTACCCACGATTCCGATACGACCAACTAATATTCCTACTATGAAAAAATTTCCTACCAATTACACTAGCA TTATGCCTATGACACACCTCCATGATTATCACCTTTGCTGGATTACCCCCAATATCTTAGGACACGTGCC TGAATCCAAAGGGTTACCTTGATAGGGTAAATAACAGAGGTTTAAATCCTCTCGTTTCCTTAGAAAAATA GGACTTGAACCTACACCTAGGAGATCAAAACTCCTCGTACTTCCATTATACTATGTTCTAGTAAAGTCAG CTAATTAAGCTTTTGGGCCCATACCCCAAAAATGTTGGTTTAAATCCCTCCTCTACTAATGAACCCAAAC GCAAGCATAATTACAATCTCAAGTTTAATCTTAGGACCAGTAATTACCATCACAAGTAATCACTGAATTA CAGCGTGAATCGGTTTAGAAATCAACATACTAGCAATTATTCCACTAATTGCTAAACAACACCACCCACG AGCAATTGAAGCCTCCATCAAATATTTCCTCACCCAAGCAGCCGCCTCATCACTACTCCTATTTTCAATT ATCAACAACACTTGAAACCTGGGACAATTTAACATTACACAACTATCTGACACCACATCAAGCACAATAA TCACCATCGCCCTCGCAATAAAACTAGGACTAGCCCCCTTCCACTACTGACTCCCAGAAACCCTACAAGG AACCACAACAATAATAACCCTAATCTTAGCAACCTGACAAAAACTAGCCCCACTATCACTAATAGTATTA ATTAATCAATCATTAAACACACCACTTCTAATACTACTAGGACTACTCTCTATATTAATTGGAGGCTGAG GTGGATTAAACCAAACCCAACTACGAAAAATAATAGCATTCTCCTCAATCGCCCATTTAGGTTGAATAAT CACAATCCTAACCTTATCAACTAAACTCACACTACTAACATTCTACATTTACATTATTATAACCGCAACA ATACTTCTAACCATTAAACTTCTAGAAACCAACAAAATATCCACAGCAATAACATCATGAACAAAACTAC CCGCCCTAAACTCCACAATAATATTAAGCCTAATATCATTAGCAGGACTACCCCCACTAACAGGATTTAT ACCAAAATGACTGATCCTTCAAGAATTAACCAAAAACCACATAACTATCATCGCAACCACAGCAGCCATC CTATCACTACTAAGCCTATTCTTTTACCTCCGAATCGCATACTACTCAACCATCACTCTAGCCCCAAACA TAAATAACTACTCACAACAATGACGACACAAAATTAACCAAAAATCATACCTTGCCCCAATAATTATCTC CTCCTCCCTCCTTACCCCAATCACACCAACACTCGCAATACTCACATAGAAACTTAGGATAATACTACAA ACCAGGGGCCTTCAACCCCCCAAATAAGAGCCAAACAACTCTTAGTTTCTGAAACCACCTAATTTAAGAC TTATAAGACTCTTATCCTATATCTTCTAAATGCAACTCAGACGCTTTAATTAAGCTAAAGCCTTACTAGA CAAATGGGCCTCGATCCCATAAACAATTTAGTTAACAGCTAAACACCCAATCCAGCGGGCTTTTGCCTAA AAATTTTTCCCGCTAAAAAAAAAGCGGGAAAACCAGGACACCAATCAAATGTGTATTTCCAGATTTGCAA TCCGATGTGAATTTCACTACATGGTTTGATAAGAAGGGGAGTCGAACCCCTGTAAAAAGGTTTACAGCCT AACGCCTAACTCAGCCATCTTACCAGTGACTTTAACCCGATGATTATTCTCAACTAACCATAAAGACATC GGCACCCTCTACTTAATCTTTGGTGCCTGGGCCGGTATAGTTGGTACAGCCCTGAGCCTGCTCATCCGAG CAGAACTAAGCCAACCTGGCACCCTCTTAGGGGATGACCAAATTTACAATGTAATTGTCACAGCACATGC TTTTGTTATAATTTTCTTCATAGTAATGCCCGTAATAATCGGCGGCTTTGGTAACTGATTAGTACCCCTA ATAATCGGCGCTCCAGACATAGCATTCCCACGAATAAACAACATAAGCTTCTGACTACTGCCCCCATCAC TACTCCTGCTTCTAGCATCATCAGGGATTGAAACAGGCGCAGGAACCGGTTGAACCGTCTACCCCCCGCT GGCTAGCAATTTAGCTCATGCTGGGGCATCAGTAGACCTAACCATTTTCTCCCTACATCTGGCCGGAGTA TCGTCAATCCTGGGAGCTATCAACTTCATCACTACAGCAATCAATATAAAATCCCCTGCAATATCACAAT ATCAAACCCCATTATTTGTGTGATCAGTAGTAATTACAGCCGTGTTACTACTTCTATCATTACCAGTACT AGCTGCAGGCATCACAATGCTACTCACAGACCGAAACCTAAACACAACTTTCTTTGATCCCTCAGGAGGT GGAGACCCTATCTTATACCAACACCTATTCTGATTCTTTGGTCACCCAGAAGTCTACATTCTCATCCTAC CAGGATTTGGCATAATCTCCCATGTCGTAACATACTATGCCAACAAAAAAGAACCATTCGGCTACATAGG CATAGTCTGAGCAATGATATCAATCGGGTTTTTAGGGTTTATCGTATGAGCCCATCATATGTTCACCGTG GGGATAGATGTAGATACACGAGCCTATTTCACATCAGCTACAATGATCATCGCTATTCCAACAGGGGTAA AAGTATTCAGCTGATTAGCCACATTACATGGAGGACTTATTAAATGAGACGCTGCCATGCTATGAGCCTT AGGCTTCATCTTCTTGTTCACAATCGGAGGCCTAACAGGTATTGTCTTAGCCAACTCATCATTAGACATT GTACTGCATGGACACATACTACGTTGTAGCCCATTCCACTATGTCTTGTCAATGGGGGCTGTATTTGCCA TTATAGCAGGATTCACTCACTGATTCCCACTTTTTTCTGGTTACTCACTACACCAAACCTGAACCAAAGT ACACTTTGGAGTAATATTTGCAGGAGTAAACATAACCTTCTTCCCCCAACACTTCCTAGGATTAGCCGGT ATACCACGACGTTACTCTGATTACCCAGATGCCTACACCCTATGAAACTCTGTTTCATCTATCGGGTCCC TAATTTCACTAATTGCAGTAATTATAATAATATTCATTATTTGAGAAGCATTCTCATCAAAACGAAAAGT TACAATAACCGAACTCACAACAACTAACGTAGAATGATTACACGGTTGTCCCCCTCCATACCATACTTAT GAAGAACCCACTCATGTACAAAACGCAAGAAAGGAAGGATTTGAACCCCCTTAAGTTAGTTTCAAGCCAA CCACATAACCTATATGTTTCTTTCTCAAGACGTTAGTAAACACATTACATAGCTTTGTCAAAGCTAAATT ATAGGTTCAAACCCTTTACGACTTAATGGCCCACCCCCTCCAATTAGGATTTCAAGACGCAATATCACCA ATTATAGAAGAACTTTTACATTTTCACGATCACACATTAATAATTGTATTCTTAATTAGCACTATAGTGC TCTATATCATTACTCTAATAATAACAACAAAACTAACACATACCAACACCATAAACGCCCAAGAAGTAGA AATCATTTGGACTATCCTACCAGCCATCGTTTTAATCACTATCGCACTGCCCTCATTACGCGTCCTATAC TTAATAGACGAAATCAACAACCCATACCTAACTATCAAAGCCATAGGTCACCAATGATATTGAACATATG AATACACTGACTACGAAAACCTAGAATTTGATTCATACATAATTCCAACCCAAGACCTACCAAAGGGGCA TTTCCGACTGTTAGAAGTTGACCATCGTATAGTAGTCCCAATAGAATCCCCCATCCGAATATTAATCTCA GCAGAAGATGTATTACATTCATGAGCAATACCATCACTTGGGGTAAAAACAGACGCCATCCCAGGACGAC TAAATCAAACAACCTTCACCATAACACGACCAGGCATCTTCTATGGTCAATGCTCGGAAATCTGCGGAGC AAACCATAGCTTCATACCAATCGTAGTAGAATCAATCCCATTAGAACACTTCGAAAACTGATCCTCACTA ATACTATCCTAAACACTACAGAAGCTAAATAGGACAGCACTAGCCTTTTAAGCTAGAAAATTGAGAGACA CCCGCCTCTCCTTAGTGATATGCCACAACTAAACCCTAATCCATGATTATCCATTTTATTAATGACATGA CTAGCTTACATTGCAATCTACCAACCAAAAATCACAACATTTCTACAAACAAACAGCATCACTCACAACT ACAAATATTCAAACACAAACCCCTGAAATTGACCATGAATCTAACAATCTTCGACCAATTCTTTAGCCCA CAAATTCTGGGAATCTCACTAATCATACTAGCCATCATTATTCCCCCAATAATATGACCATCCCAAAACA ATCGATGGTTAACCAATCGCCTCTCAACCCTACAACTATGAATAATCAATACAATCACAAAACAATTAAT ACTGCCAATCAACAAACCAGGGCACCAATGATCCATTATACTTACATCACTAATAACATTACTACTAACT ATCAACCTACTAGGACTCCTACCTTACACATTCACACCAACCACACAACTATCAATGAACATAGCACTAG CTGTACCCCTATGAATAGCCACCGTACTCACAGGCCTACGAAACCAACCAACAAAATCACTAGGACATCT ACTACCAGAAGGCACACCCACCCCCCTCATCCCAGCCCTCATTATCATCGAAACCATCAGCCTACTAATC CGACCTTTAGCATTAGGGGTACGACTAACAGCTAACCTGACAGCCGGACACTTACTCATCCAACTAATTT CTACTACCACCATCACTCTCATACCTACTTCCCCAATACTATCCATGCTAACCTCGACCATCCTACTACT ACTAATACTACTAGAATTGGCCGTTGCATTAATCCAAGCATACGTATTTGCCCTACTACTAAGCCTGTAC TTACAAGAAAACGTCTAATGGCCCACCAAACACATGCCTATCACATAGTAGACCCAAGCCCATGACCACT AACTGGAGCAACAGCAGCATTACTACTAACCTCAGGCCTCGCTATATGATTCCACTACAACTCAATAACA CTGATAATCCTAGGCCTACTAATTACAATACTAACAATAGTACAATGATGACGGGATATCGTACGAGAAA GTACATTCCAAGGACATCACACAATACCAGTACAAAAAGGCCTACGATATGGAATAATCCTATTTATCAC ATCAGAAGTTTTCTTCTTCATTGGTTTCTTCTGAGCATTCTACCATTCAAGCCTAGCTCCAACCCCAGAA CTAGGCGGATGTTGACCTCCAACAGGCATTCACCCATTAAACCCATTCGAAGTCCCACTACTAAATACAG CAGTACTACTAGCCTCAGGTGTAACAATCACCTGAGCCCACCACAGCCTAATAGCAGCTAACCGAACCCA AGCAATCCAAGCCCTCACCACAACTGTCATTCTAGGATTATATTTTACAGCCCTACAAGCCATAGAATAT TACGAAGCACCATTCACAATCGCCGATGGAGTTTACGGCTCCACATTCTTCGTGGCAACAGGATTCCACG GACTACACGTAATTATTGGATCTACATTCCTACTGGTATGCTTAATACGACTAATCAAATTCCACTTTAC CACCGCCCACCACTTCGGCTTTGAAGCCGCCGCATGATATTGACACTTTGTAGACGTTGTCTGACTATTC TTATATATCTCAATCTACTGATGAGGCTCATACTTTTCTAATACAACCAATATAAATGACTTCCAATCAT TCAATTTCAGTTCAACCCTGAAGAAAAGTAATGAACACAGTATCTTCACTTATCATCCTAGCACTAATTA TCTCAACCACCCTCATCCTAATCAACAGCCAACTATCAACAATAAAACCAAACAAAGAAAAGCTATCCCC ATATGAATGTGGATTTGACCCACTAAAAACTATACGCCTACCATTCTCAATCCGTTTCTTCCTCAGTAGC AATTCTATTCTTATTGTTCGACCTAGAAATCGCACTACTATTACCACTCCCATGAGCTATTCAACTAACC ACACCAACAAATACCCTTATACTAACCTTTGCTATCTTACTCCTCCTAACACTAGGTTTTATTTACGAAT GAACCCAAGGAGGACTAGAATGAGCAGAATGGGTCACTAATTTAACCTAAAATAGCTAATTTCGACTTAG CCAATCATGATTAATAAAACATGGTAACCCTATGACACCACTACATTTCACCTACTTCATAGCATTCGTC ATCAGCATAACAGGCTTCATACTCCACCGAATCTCCTTAATCTCAACTCTACTATGCCTAGAAAGCATAA TACTATCGCTATTCATCGCCCTATCCCTTCACCCCATACAACTCCAAACCTCATCATTTATACTAAACCC AATACTAGTCCTATCATTCTCCGCATGTGAAGCTAGCCTAGGATTATCCTTGTTAGTAGCATCATCACGA ACCCACAAACCAAACAACCTTCAAAACCTAAACCTACTACAATGCTAAAAATTCTAATCCCAACAGTAAT ACTAATCCCAACCATCACAATATGTAAACCAACACAACTATGATATTCATCATTAATCCACAGCATACTA ATTTCACTACTTAGCCTACAACTATTTAACCCATCACTACAACCAACCATAAACTTCTCAAACCATAACC TAGCAACAGACCAAGTATCAACCCCCCTAATCATTCTATCATGTTGACTTACCCCATTAATAATTTTAGC CAGCCAAAACCACTTATCAACAGAACCCCTATTACGAAAACGAACCTTCATCATCACTACAGTACTTCTT CAAGCACTACTAATCATAACATTTTCAACCACAGACCTAATAATATTCTTCGTATTATTTGAATCCACTC TAATCCCCACACTAATGTTAATCACACGTTGAGGGAACCAAATAGAACGACTAAACGCCGGAACCTATTT CTTATTTTATACACTAATAGGATCACTACCCCTATTAATTGCTCTACTATCACTACACTCCAACACAAAC TCACTTTCAATCCCCATAATACAACTAAACCCACCAACAATAACAAACACATGAACAAACTCAATATGAC TACTAGCCATACTAACCGCCTTCATAATTAAACTGCCACTATACGGCTTACACCTATGACTGCCAAAAGC ACATGTCGAAGCCCCAATCGCAGGCTCAATAATCCTAGCTGCCATCCTACTAAAACTTGGAGGATATGGT ATCATTCGAATCACACTAACCACCAACTTTTTATCAAAAACCATACACTACCCATTCATAATCTTAGCAT TATGAGGCATCATTATAACAAGCCTAATCTGCTTACGCCAAACCGACCTTAAATCACTAATCGCTTACTC ATCTGTAAGCCACATAGGTCTAGTCACCGCAGCAACGCTTACACAAACAGAATGGGCCTGTACCGGGGCT ATCACCCTAATAATCGCCCACGGTCTAACATCATCTATACTATTCTGCTTAGCCAACACAAACTACGAAC GAATTCACAGCCGAACACTACTTCTAACCCAAAACATACAACTATTACTTCCACTAATAGGCACATGATG ACTACTCGCCAGCTTAACCAACATAGCCCTCCCACCAACCATCAACCTCATAGGAGAACTAACCATTATC ACCTCACTATTCAACTGATCAAATACTACAATCATTATTACAGGACTAGGAACCCTAATCACCGCCACTT ATACCCTGCACATATTCTCCTCAACCCAATGAGGGGAACTACCACAACACATCAAAACTATTTCTGCATC ACACACACGAGAACGCCTAATTATGACACTACACATCTTACCTATAATACTACTAATAACAAAACCAGAA CTAATCTGAGGCCCATTCCACTGTTCATATAGTTTTAAATCAAACATTAGACTGTGGCTCTAAAAATAGG GGTTTAAATCCCCTTATAAACCGAGAAAGTAATAATAGAAACTGCTAATTCCTATTTCCTGAGATTAAAT TCACAGCTTTCTTACTTTCAAAGGATAACAGCAATCCATTGGTTTTAGGAACCACTAACTCTTGGTGCAA CTCCAAGTGAAAGTAATGACAGCACTTTTTAACTCTACTCTACTAATAGCACTTATAACCCTAACCTTAC CCCTAATAAACCCACCATTAAACATGAAACCAAAAACCGCCGTAAAAATATCATTCTTCATCACCACAAT CCCATTAACCACATTCACCTTCTCCAACACTGAATCCATCATTACTAATTGATCATGAACAATAACCTCA ACGTTTACAATATCCATAAGCTTCAAATTTGACCAATACTCCATTATATTCATTCCCGTAGCCTTATACG TAACATGATCCATCCTAGAATTCACCCAATGATATATATCATCAGACCCACACATCACAAAATTCTTCAA ATACCTAATAATCTTCCTAATAGCCATGATAACCCTAGTCACCGCCAACAACATATTCCAGTTCTTTATT GGATGAGAAGGGGTTGGAATCATATCCTTCCTCCTAATCGGCTGATGACATAGCCGACTAGAAGCTTGCT CATCAGCCCTACAAGCCATCATATACAACCGCACAGGAGACATTGGATTAATCTTAAGTATGGCCTGAAT ATCAATAAACCTTAACTCATGGGAACTACAACAAATTTTATCCAACACCAACCCAGTCCCACTACTCCCA CTATTGAGCTTTATCCTCGCAGCAACTGGAAAATCAGCCCAATTCGGCCTTCACCCATGACTCCCAGCAG CAATAGAGGGCCCTACCCCTGTTTCAGCCCTACTACACTCCAGCACCATAGTTGTAGCAGGCATTTTCCT ACTTATCCGAATCCATCCAATACTCTCCACAAACCAAACAGCCCTCTCAACTTGCCTCTGCCTAGGGGCC ATAACCACACTATTCACAGCCATCTGCGCTATCACCCAAAACGATATCAAAAAAATTATCGCCTTCTATA CATCAAGCCAACTAGGCCTTATAATAGTAGCCATCGGCCTTAATCAACCACAACTAGCTTTCCTTCACAT CTCAATACACGCCTTTTTCAAGGCAATATTATTCCTATGCTCCGGCTCAATCATTCACAATCTAAACAAT GAACAAGACATTCGAAAAATAGGAGGACTCCATAAACCCCTCCCAATCACTTCCTCATGCATCACTATCG GCAGCCTCGCCTTATCAGGAATCCCATTCCTAACAGGATTTTACTCAAAAGATACTATCATCGAAACCAT AAACACATCCTATATAAACGCCTGAGCCCTGCTCCTAACACTAATCGCAACAGCCCTCACTGCAGCCTAC AGCCTACGAATCACAATCCTAGTTCAAACAGGACAACCACGCTTCCAACCAATACTTATAATCAACGAAA ATCATTCCACATCCACAAACCCAATTATCCGCCTAGCACTAGGAAGCATTATTGCAGGACTACTAATCGC ATCAAACACAATCCCAATAAAAACACCACAAATAACCATACCACACTATATAAAAACATCAGCACTAATT GTAACAATCCTAGGGTTAATCCTAGCCATAGAACTAATCACAATAACGAACAAAACCACAAAACCATCAA AACCCCACACCTTCTCAAACCTGTTAATATACTTCAACGTCCTAACCCACCGCTCATTATCAATACTAAA CTTAAAATTCAGCCAAAACACCGCAACACACCTAACCGACCTCATCTGATATGAAAATATTGGCCCAAAA TGGATAACAAAATCACAAACCACCCCCATCACAGCATCATCCTCACAAAAAGGACTAATCAAAATCTATC TCACCTCATTTCTATTGTCCACCATCATCCTACTTCTAATCTAATAGAGCGAATCGCCCCTCCGACCAAA CCACGAACCAAATCCAACACGACAAACAACGTCAACAACAAACCCCAACCAACAATTAAAAACACCACAC ACCCATAATAATAAAACCACGACACCCCAATATAATCCATTCGAACATTAAACAAACCATCAGCATCCAT CACAACATCACCATACCCCTCCAAACTTCACACACCAAAACAAACTACAACTGCACCCACAACTAACAAA ATATAACCAACTACATAAAACAAGTCCCCATAATTACATCAAGCTATTGGATATGGATCCCCCGTCAACG CCACAGAATAAGCAAAAACAACTAATATTCCCCCCAAATAAATCAAAAACAACACCAAAGAAATAAAAGA CCCACCCATACCAACCAACATTAAACACCCAAACACAGCCCCAAAAATCAAACCAACAACACCATAATAA GGAGAAGGGCCAGAAGCCACACTAATAACCCAAAAAATAAAACAAACCTCAAATAAAAACATAAAAAACA CCATTATTCTCGCCTGGACTTTAACCAAGACTAATGGTTTGAAAAACCACCGTTGTATTCAACTACAAAA ACCTAATGACTACCAACCTACGAAAATCCCACCCAATAATTAAAATCATTAATAATTCACTAATTGACCT CCCAAGTCCATCCAACATCTCCATCTGATGAAATTTCGGATCCCTATTAGGCGCTTGCCTAGCCATCCAA ATCATCACAGGGTTATTCCTAGCCATGCATTACTCACCAAACATCTTAACAGCATTCTCATCAGTTTCCC ACATCACCCGGGATGTACAATACGGCTGATTAATCCGAAATATACACGCCAATGGAGCCTCACTATTCTT CATGTGTATTTACCTACATATCGGACGAGGAATATATTATGGCTCATACCTATACAAACAAACTTGAAAC ACAGGCGTAATCCTACTACTATTAACCATGGCAACAGCATTCATAGGATATGTCCTACCATGAGGCCAAA TATCCTTCTGAGGGGCTACAGTCATCACTAACCTACTCTCAGCCATTCCCTATATTGGCACCACAATAGT ACAATGAGTATGAGGGGGATTTTCTGTAGACAATGCTACCCTAACACGATTCTTTACCCTACACTTTTTA CTTCCGTTCATAATCCTAGGACTTGCAATAATCCACCTACTCTTCCTCCACGAAACCGGATCAAATAACC CAACAGGACTTAACTCAAACACCGATAAAATCCCATTCCACCCCTACTTCTCATATAAAGACCTATTAGG ATTTGTAGCAATACTTACCGTACTCCTATCAATCGCCATATTCTACCCAAACCTACTAGGAGACCCAGAC AACTTCACACCCGCTAACCCACTATCTACACCCCCACATATCAAACCAGAGTGATACTTCTTATTCGCCT ACGCCATCCTACGATCTATTCCTAATAAACTAGGAGGCGTACTCGCCCTACTCATATCTATTCTAGTATT ATTCATCCTACCCATACTTCACACATCAAAACAACGAACACTGACATTCCGCCCTATCACCCAAACACTA TTCTGATCATTCATCGCCAACCTTGCAGTACTAACATGAATTGGGGGTCAACCAGTGGAAAATCCGTTTA TTATCATTGGACAGATAGCCTCTATCCTCTACTTCACAATCTTACTCGTACTTATACCAATCTCAAATGC AATAGAAAACAAATAAATAAACCTAGACTACTCTAAGTAGCTTAAACCACTAAAAGCACTGGTCTTGTAA ACCAAAGAATGAAGAACACAACCTTCCTAGAGTAAACATACAACAATCAAAAGAGAAGGGCTCAAACCTT CCTCTCCGATCCCCAAAACCGGAATTTTAGATAAACTACCCTTTGATAACAACCCTTTAAATTTTATACT TTTTTTTCTTCTCCCGCGCCCAAGAGATAAATTACCCTTTAAATTTTATACTTTTTTTTCTTCTCCCGCG CCCAAGAGATAAATTACCCTTTAAATTTTATACTTTTTTTTCTTCTCCCGCGCCCAAGAGATAAATTACC CTTTAAATTTTATACTTTTTTTTCTTCTCCCGCGCCCAAGAGATAAATTACCCTTTAAATTTTATACTTT TTTTTCTTCTCCCGCGCCCAAGAGATAAATTACCCTTTAAACATACTATGTATTATTGTACATTCATCTA TTTTCCACAAGCATATCACCAGTAATATTAGTGCTAATCGTACTAAATACATTTAATGATTAATTTTACA TAACACACTTTAAACACATGACTATTATTACGGTAATAATAAACAATGACATAGGACACACTTATTTGCA ATAGTTCCACAGCATGAATATCGCCACAGTACCAGGTTATTTCTTAATCTACCAACTCACGAGAGATAAG CAACCCTTGTTAGTAAGATACTAAATTACCAGTTTCAGGCCCATTAACAGTTGGCGTACATAACTGATCT ATACTGGCATCTGGTTGTTTTTTCAGGCACATTAATTGCTAAAGTTCATACGTCTCTTTTTAAAAGGCCA ACGGTTGATGTGTTCTATACATTCATCTTATAACTAGACATTATATGGTTTGCAGGCATATAGTAGCTCT TTTTTTCTCTTTGTAATCTCAGGCCCACATACATGATGTCTGCCGACTCAATGAAACTGGACTTACGTTC AAATTGCTTGGATCACACACGTACCAAATGGTATTAATTAATTAATGCTTGATAGACATAAAAATTTTAA AAAACCAACAACACTAATCCCAACCTATAACAATTTTTAAGTTAAACCCCCCTACCCCCATTAAACTAGT ACTAACCTGCATAACCATTTTACTCTCGTCAAACCCCAAAATCCGAGAATGACTATACTGATACAACACT AGCCTTTTGTGAATCCTAACTCAATTAATAATTCACCATATTTATATATTTATATATTTATATATTTATA TATTTATATATATATTTATATATATATTTATATATATATTTATATATATATTTATATATATATATATTTA AATATACATCTATACACCCACATATACCTACATATACACATCCTACATTACTCCACAATCCAAGACATAC ACCTATTTTTATCACACAT
Contact: Vadim E. Fraifeld, MD, PhD
Head: Lab for the Biology of Aging, The Shraga Segal Department of Microbiology, Immunology and Genetics, Faculty of Health Sciences, Ben-Gurion University of the Negev
P.O. Box 653, Beer-Sheva 8410501, Israel
Email:
Head: Lab for the Biology of Aging, The Shraga Segal Department of Microbiology, Immunology and Genetics, Faculty of Health Sciences, Ben-Gurion University of the Negev
P.O. Box 653, Beer-Sheva 8410501, Israel
Email:
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If you would like to cite this database please use:
Toren D, Barzilay T, Tacutu R, Lehmann G, Muradian KK, Fraifeld VE. MitoAge: a database for comparative analysis of mitochondrial DNA, with a special focus on animal longevity. Nucleic Acids Res. 2016; 44(D1):D1262-5.
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