Viewing data for Clupea pallasii
| Scientific name | Clupea pallasii |
| Common name | Pacific herring |
| Maximum lifespan | 19.00 years (Clupea pallasii@AnAge) |
| Total mtDNA (size: 16700 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 7911 | 8789 | 4714 | 3197 | 4296 | 4493 |
| Base content per 1 kb (bases) | 474 | 526 | 282 | 191 | 257 | 269 |
| Base content (%) | 47.4% | 52.6% | ||||
| Total protein-coding genes (size: 11403 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 5433 | 5970 | 3348 | 2085 | 3101 | 2869 |
| Base content per 1 kb (bases) | 476 | 524 | 294 | 183 | 272 | 252 |
| Base content (%) | 47.6% | 52.4% | ||||
| D-loop (size: 1047 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 409 | 638 | 230 | 179 | 321 | 317 |
| Base content per 1 kb (bases) | 391 | 609 | 220 | 171 | 307 | 303 |
| Base content (%) | 39.1% | 60.9% | ||||
| Total tRNA-coding genes (size: 1550 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 758 | 792 | 413 | 345 | 355 | 437 |
| Base content per 1 kb (bases) | 489 | 511 | 266 | 223 | 229 | 282 |
| Base content (%) | 48.9% | 51.1% | ||||
| Total rRNA-coding genes (size: 2638 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 1277 | 1361 | 700 | 577 | 507 | 854 |
| Base content per 1 kb (bases) | 484 | 516 | 265 | 219 | 192 | 324 |
| Base content (%) | 48.4% | 51.6% | ||||
| 12S rRNA gene (size: 953 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 479 | 474 | 262 | 217 | 186 | 288 |
| Base content per 1 kb (bases) | 503 | 497 | 275 | 228 | 195 | 302 |
| Base content (%) | 50.3% | 49.7% | ||||
| 16S rRNA gene (size: 1685 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 798 | 887 | 438 | 360 | 321 | 566 |
| Base content per 1 kb (bases) | 474 | 526 | 260 | 214 | 191 | 336 |
| Base content (%) | 47.4% | 52.6% | ||||
| ATP6 (size: 683 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 315 | 368 | 213 | 102 | 198 | 170 |
| Base content per 1 kb (bases) | 461 | 539 | 312 | 149 | 290 | 249 |
| Base content (%) | 46.1% | 53.9% | ||||
| ATP8 (size: 168 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 71 | 97 | 48 | 23 | 46 | 51 |
| Base content per 1 kb (bases) | 423 | 577 | 286 | 137 | 274 | 304 |
| Base content (%) | 42.3% | 57.7% | ||||
| COX1 (size: 1551 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 715 | 836 | 412 | 303 | 448 | 388 |
| Base content per 1 kb (bases) | 461 | 539 | 266 | 195 | 289 | 250 |
| Base content (%) | 46.1% | 53.9% | ||||
| COX2 (size: 691 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 311 | 380 | 186 | 125 | 185 | 195 |
| Base content per 1 kb (bases) | 450 | 550 | 269 | 181 | 268 | 282 |
| Base content (%) | 45.0% | 55.0% | ||||
| COX3 (size: 785 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 383 | 402 | 229 | 154 | 214 | 188 |
| Base content per 1 kb (bases) | 488 | 512 | 292 | 196 | 273 | 239 |
| Base content (%) | 48.8% | 51.2% | ||||
| CYTB (size: 1141 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 529 | 612 | 318 | 211 | 334 | 278 |
| Base content per 1 kb (bases) | 464 | 536 | 279 | 185 | 293 | 244 |
| Base content (%) | 46.4% | 53.6% | ||||
| ND1 (size: 975 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 484 | 491 | 290 | 194 | 283 | 208 |
| Base content per 1 kb (bases) | 496 | 504 | 297 | 199 | 290 | 213 |
| Base content (%) | 49.6% | 50.4% | ||||
| ND2 (size: 1045 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 523 | 522 | 340 | 183 | 274 | 248 |
| Base content per 1 kb (bases) | 500 | 500 | 325 | 175 | 262 | 237 |
| Base content (%) | 50.0% | 50.0% | ||||
| ND3 (size: 349 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 163 | 186 | 97 | 66 | 107 | 79 |
| Base content per 1 kb (bases) | 467 | 533 | 278 | 189 | 307 | 226 |
| Base content (%) | 46.7% | 53.3% | ||||
| ND4 (size: 1381 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 685 | 696 | 420 | 265 | 360 | 336 |
| Base content per 1 kb (bases) | 496 | 504 | 304 | 192 | 261 | 243 |
| Base content (%) | 49.6% | 50.4% | ||||
| ND4L (size: 297 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 144 | 153 | 95 | 49 | 81 | 72 |
| Base content per 1 kb (bases) | 485 | 515 | 320 | 165 | 273 | 242 |
| Base content (%) | 48.5% | 51.5% | ||||
| ND5 (size: 1836 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 854 | 982 | 535 | 319 | 497 | 485 |
| Base content per 1 kb (bases) | 465 | 535 | 291 | 174 | 271 | 264 |
| Base content (%) | 46.5% | 53.5% | ||||
| ND6 (size: 522 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 262 | 260 | 168 | 94 | 80 | 180 |
| Base content per 1 kb (bases) | 502 | 498 | 322 | 180 | 153 | 345 |
| Base content (%) | 50.2% | 49.8% | ||||
| ATP6 (size: 683 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
Amino acid frequencies:
Glycine (Gly, G)
n = 11 (4.87%) 
Alanine (Ala, A)
n = 19 (8.41%) 
Serine (Ser, S)
n = 8 (3.54%) 
Threonine (Thr, T)
n = 22 (9.73%) 
Cysteine (Cys, C)
n = 0 (0%) 
Valine (Val, V)
n = 16 (7.08%) 
Leucine (Leu, L)
n = 51 (22.57%) 
Isoleucine (Ile, I)
n = 17 (7.52%) 
Methionine (Met, M)
n = 11 (4.87%) 
Proline (Pro, P)
n = 18 (7.96%) 
Phenylalanine (Phe, F)
n = 12 (5.31%) 
Tyrosine (Tyr, Y)
n = 5 (2.21%) 
Tryptophan (Trp, W)
n = 5 (2.21%) 
Aspartic acid (Asp, D)
n = 1 (0.44%) 
Glutamic acid (Glu, E)
n = 4 (1.77%) 
Asparagine (Asn, N)
n = 8 (3.54%) 
Glutamine (Gln, Q)
n = 9 (3.98%) 
Histidine (His, H)
n = 3 (1.33%) 
Lysine (Lys, K)
n = 1 (0.44%) 
Arginine (Arg, R)
n = 6 (2.65%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 11 | 6 | 3 | 17 | 8 | 13 | 5 | 7 | 5 | 4 | 5 | 6 | 4 | 1 | 7 | 5 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 8 | 0 | 0 | 2 | 6 | 9 | 2 | 2 | 4 | 4 | 1 | 2 | 9 | 7 | 0 | 7 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 8 | 7 | 0 | 0 | 0 | 3 | 0 | 0 | 5 | 1 | 4 | 1 | 1 | 3 | 5 | 0 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 3 | 3 | 1 | 0 | 1 | 1 | 0 | 0 | 2 | 4 | 0 | 0 | 0 | 0 | 0 | 4 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 51 | 79 | 64 | 33 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 27 | 62 | 31 | 107 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 24 | 72 | 74 | 57 | ||||||||||||
| ATP8 (size: 168 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: MPQLNPAPWFAILVFSWVVFLTIIPQKILAHNFNNEPTTMGAEKAKPEPWNWPWY* | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 1 (1.82%)
Alanine (Ala, A)
n = 5 (9.09%)
Serine (Ser, S)
n = 1 (1.82%)
Threonine (Thr, T)
n = 3 (5.45%)
Cysteine (Cys, C)
n = 0 (0%)
Valine (Val, V)
n = 3 (5.45%)
Leucine (Leu, L)
n = 4 (7.27%)
Isoleucine (Ile, I)
n = 4 (7.27%)
Methionine (Met, M)
n = 2 (3.64%)
Proline (Pro, P)
n = 8 (14.55%)
Phenylalanine (Phe, F)
n = 4 (7.27%)
Tyrosine (Tyr, Y)
n = 1 (1.82%)
Tryptophan (Trp, W)
n = 5 (9.09%)
Aspartic acid (Asp, D)
n = 0 (0%)
Glutamic acid (Glu, E)
n = 3 (5.45%)
Asparagine (Asn, N)
n = 5 (9.09%)
Glutamine (Gln, Q)
n = 2 (3.64%)
Histidine (His, H)
n = 1 (1.82%)
Lysine (Lys, K)
n = 3 (5.45%)
Arginine (Arg, R)
n = 0 (0%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 2 | 2 | 0 | 1 | 0 | 0 | 1 | 2 | 2 | 0 | 2 | 0 | 1 | 0 | 0 | 4 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 2 | 0 | 0 | 0 | 4 | 1 | 0 | 0 | 0 | 0 | 1 | 3 | 4 | 1 | 0 | 3 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 3 | 2 | 0 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 1 | 2 | 1 | 0 | 0 | 3 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 5 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 12 | 13 | 17 | 14 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 6 | 17 | 16 | 17 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 5 | 18 | 18 | 15 | ||||||||||||
| COX1 (size: 1551 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 46 (8.91%)
Alanine (Ala, A)
n = 47 (9.11%)
Serine (Ser, S)
n = 30 (5.81%)
Threonine (Thr, T)
n = 36 (6.98%)
Cysteine (Cys, C)
n = 1 (0.19%)
Valine (Val, V)
n = 41 (7.95%)
Leucine (Leu, L)
n = 63 (12.21%)
Isoleucine (Ile, I)
n = 40 (7.75%)
Methionine (Met, M)
n = 24 (4.65%)
Proline (Pro, P)
n = 28 (5.43%)
Phenylalanine (Phe, F)
n = 42 (8.14%)
Tyrosine (Tyr, Y)
n = 18 (3.49%)
Tryptophan (Trp, W)
n = 17 (3.29%)
Aspartic acid (Asp, D)
n = 14 (2.71%)
Glutamic acid (Glu, E)
n = 11 (2.13%)
Asparagine (Asn, N)
n = 14 (2.71%)
Glutamine (Gln, Q)
n = 8 (1.55%)
Histidine (His, H)
n = 19 (3.68%)
Lysine (Lys, K)
n = 9 (1.74%)
Arginine (Arg, R)
n = 8 (1.55%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 28 | 12 | 6 | 21 | 6 | 27 | 6 | 2 | 7 | 1 | 13 | 4 | 16 | 8 | 14 | 28 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 18 | 0 | 1 | 5 | 21 | 18 | 3 | 6 | 3 | 22 | 15 | 10 | 8 | 8 | 2 | 9 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 12 | 12 | 3 | 3 | 8 | 12 | 2 | 1 | 4 | 4 | 14 | 2 | 1 | 7 | 7 | 3 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 16 | 8 | 3 | 5 | 9 | 7 | 2 | 2 | 0 | 5 | 1 | 0 | 0 | 1 | 0 | 15 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 159 | 123 | 128 | 107 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 77 | 136 | 94 | 210 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 67 | 153 | 166 | 131 | ||||||||||||
| COX2 (size: 691 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 9 (3.93%)
Alanine (Ala, A)
n = 15 (6.55%)
Serine (Ser, S)
n = 17 (7.42%)
Threonine (Thr, T)
n = 9 (3.93%)
Cysteine (Cys, C)
n = 2 (0.87%)
Valine (Val, V)
n = 23 (10.04%)
Leucine (Leu, L)
n = 30 (13.1%)
Isoleucine (Ile, I)
n = 18 (7.86%)
Methionine (Met, M)
n = 12 (5.24%)
Proline (Pro, P)
n = 14 (6.11%)
Phenylalanine (Phe, F)
n = 7 (3.06%)
Tyrosine (Tyr, Y)
n = 9 (3.93%)
Tryptophan (Trp, W)
n = 5 (2.18%)
Aspartic acid (Asp, D)
n = 13 (5.68%)
Glutamic acid (Glu, E)
n = 14 (6.11%)
Asparagine (Asn, N)
n = 5 (2.18%)
Glutamine (Gln, Q)
n = 8 (3.49%)
Histidine (His, H)
n = 10 (4.37%)
Lysine (Lys, K)
n = 4 (1.75%)
Arginine (Arg, R)
n = 6 (2.62%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 13 | 5 | 7 | 7 | 7 | 9 | 1 | 4 | 7 | 1 | 3 | 7 | 11 | 2 | 1 | 6 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 5 | 1 | 1 | 2 | 6 | 4 | 3 | 1 | 0 | 5 | 3 | 4 | 4 | 4 | 2 | 2 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 1 | 5 | 1 | 6 | 4 | 4 | 0 | 0 | 3 | 4 | 5 | 1 | 2 | 1 | 4 | 2 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 8 | 11 | 3 | 4 | 9 | 3 | 1 | 0 | 2 | 3 | 1 | 0 | 0 | 0 | 0 | 4 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 74 | 62 | 51 | 43 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 25 | 52 | 63 | 90 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 26 | 72 | 81 | 51 | ||||||||||||
| COX3 (size: 785 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 23 (8.85%)
Alanine (Ala, A)
n = 23 (8.85%)
Serine (Ser, S)
n = 15 (5.77%)
Threonine (Thr, T)
n = 23 (8.85%)
Cysteine (Cys, C)
n = 2 (0.77%)
Valine (Val, V)
n = 21 (8.08%)
Leucine (Leu, L)
n = 30 (11.54%)
Isoleucine (Ile, I)
n = 11 (4.23%)
Methionine (Met, M)
n = 6 (2.31%)
Proline (Pro, P)
n = 12 (4.62%)
Phenylalanine (Phe, F)
n = 25 (9.62%)
Tyrosine (Tyr, Y)
n = 12 (4.62%)
Tryptophan (Trp, W)
n = 12 (4.62%)
Aspartic acid (Asp, D)
n = 5 (1.92%)
Glutamic acid (Glu, E)
n = 9 (3.46%)
Asparagine (Asn, N)
n = 1 (0.38%)
Glutamine (Gln, Q)
n = 8 (3.08%)
Histidine (His, H)
n = 16 (6.15%)
Lysine (Lys, K)
n = 2 (0.77%)
Arginine (Arg, R)
n = 5 (1.92%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 5 | 6 | 2 | 5 | 3 | 11 | 4 | 5 | 5 | 3 | 6 | 4 | 10 | 1 | 9 | 16 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 4 | 1 | 1 | 2 | 10 | 11 | 0 | 3 | 6 | 8 | 6 | 5 | 3 | 3 | 1 | 3 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 13 | 6 | 1 | 2 | 3 | 5 | 2 | 0 | 3 | 4 | 8 | 2 | 2 | 0 | 1 | 2 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 14 | 7 | 2 | 3 | 2 | 2 | 0 | 0 | 2 | 3 | 0 | 0 | 0 | 0 | 0 | 10 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 81 | 64 | 46 | 70 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 45 | 70 | 53 | 93 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 28 | 95 | 88 | 50 | ||||||||||||
| CYTB (size: 1141 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 27 (7.12%)
Alanine (Ala, A)
n = 37 (9.76%)
Serine (Ser, S)
n = 25 (6.6%)
Threonine (Thr, T)
n = 20 (5.28%)
Cysteine (Cys, C)
n = 3 (0.79%)
Valine (Val, V)
n = 27 (7.12%)
Leucine (Leu, L)
n = 59 (15.57%)
Isoleucine (Ile, I)
n = 25 (6.6%)
Methionine (Met, M)
n = 11 (2.9%)
Proline (Pro, P)
n = 21 (5.54%)
Phenylalanine (Phe, F)
n = 31 (8.18%)
Tyrosine (Tyr, Y)
n = 14 (3.69%)
Tryptophan (Trp, W)
n = 12 (3.17%)
Aspartic acid (Asp, D)
n = 10 (2.64%)
Glutamic acid (Glu, E)
n = 5 (1.32%)
Asparagine (Asn, N)
n = 18 (4.75%)
Glutamine (Gln, Q)
n = 6 (1.58%)
Histidine (His, H)
n = 12 (3.17%)
Lysine (Lys, K)
n = 9 (2.37%)
Arginine (Arg, R)
n = 8 (2.11%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 18 | 7 | 4 | 13 | 9 | 15 | 11 | 10 | 4 | 2 | 7 | 8 | 7 | 5 | 9 | 22 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 7 | 0 | 3 | 8 | 12 | 16 | 1 | 1 | 2 | 14 | 10 | 4 | 5 | 5 | 7 | 7 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 6 | 6 | 1 | 4 | 7 | 10 | 2 | 0 | 2 | 3 | 11 | 1 | 1 | 2 | 16 | 4 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 8 | 4 | 1 | 6 | 4 | 6 | 3 | 0 | 0 | 7 | 1 | 0 | 0 | 0 | 0 | 11 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 106 | 95 | 85 | 94 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 52 | 101 | 74 | 153 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 53 | 122 | 119 | 86 | ||||||||||||
| ND1 (size: 975 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 17 (5.25%)
Alanine (Ala, A)
n = 37 (11.42%)
Serine (Ser, S)
n = 23 (7.1%)
Threonine (Thr, T)
n = 22 (6.79%)
Cysteine (Cys, C)
n = 1 (0.31%)
Valine (Val, V)
n = 17 (5.25%)
Leucine (Leu, L)
n = 60 (18.52%)
Isoleucine (Ile, I)
n = 19 (5.86%)
Methionine (Met, M)
n = 15 (4.63%)
Proline (Pro, P)
n = 23 (7.1%)
Phenylalanine (Phe, F)
n = 20 (6.17%)
Tyrosine (Tyr, Y)
n = 11 (3.4%)
Tryptophan (Trp, W)
n = 8 (2.47%)
Aspartic acid (Asp, D)
n = 4 (1.23%)
Glutamic acid (Glu, E)
n = 11 (3.4%)
Asparagine (Asn, N)
n = 10 (3.09%)
Glutamine (Gln, Q)
n = 6 (1.85%)
Histidine (His, H)
n = 5 (1.54%)
Lysine (Lys, K)
n = 7 (2.16%)
Arginine (Arg, R)
n = 8 (2.47%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 15 | 4 | 3 | 13 | 7 | 15 | 12 | 11 | 3 | 3 | 2 | 7 | 5 | 3 | 8 | 12 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 12 | 0 | 1 | 8 | 12 | 7 | 10 | 3 | 6 | 1 | 7 | 6 | 13 | 1 | 3 | 6 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 9 | 5 | 2 | 4 | 9 | 3 | 3 | 1 | 3 | 5 | 6 | 2 | 2 | 6 | 4 | 1 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 4 | 8 | 3 | 1 | 3 | 4 | 3 | 0 | 0 | 4 | 4 | 0 | 0 | 0 | 1 | 6 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 86 | 89 | 77 | 73 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 38 | 101 | 55 | 131 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 70 | 100 | 76 | 79 | ||||||||||||
| ND2 (size: 1045 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 16 (4.61%)
Alanine (Ala, A)
n = 41 (11.82%)
Serine (Ser, S)
n = 23 (6.63%)
Threonine (Thr, T)
n = 47 (13.54%)
Cysteine (Cys, C)
n = 3 (0.86%)
Valine (Val, V)
n = 15 (4.32%)
Leucine (Leu, L)
n = 66 (19.02%)
Isoleucine (Ile, I)
n = 20 (5.76%)
Methionine (Met, M)
n = 18 (5.19%)
Proline (Pro, P)
n = 21 (6.05%)
Phenylalanine (Phe, F)
n = 11 (3.17%)
Tyrosine (Tyr, Y)
n = 9 (2.59%)
Tryptophan (Trp, W)
n = 11 (3.17%)
Aspartic acid (Asp, D)
n = 2 (0.58%)
Glutamic acid (Glu, E)
n = 4 (1.15%)
Asparagine (Asn, N)
n = 9 (2.59%)
Glutamine (Gln, Q)
n = 13 (3.75%)
Histidine (His, H)
n = 6 (1.73%)
Lysine (Lys, K)
n = 8 (2.31%)
Arginine (Arg, R)
n = 5 (1.44%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 13 | 7 | 6 | 12 | 16 | 15 | 14 | 6 | 7 | 6 | 6 | 4 | 4 | 1 | 6 | 5 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 12 | 1 | 2 | 4 | 19 | 11 | 7 | 0 | 3 | 7 | 6 | 7 | 8 | 5 | 1 | 12 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 20 | 10 | 5 | 7 | 7 | 2 | 2 | 0 | 5 | 4 | 5 | 2 | 3 | 5 | 4 | 0 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 6 | 2 | 2 | 2 | 0 | 5 | 3 | 3 | 0 | 1 | 1 | 0 | 0 | 0 | 0 | 9 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 78 | 102 | 107 | 61 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 40 | 127 | 51 | 130 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 65 | 111 | 90 | 82 | ||||||||||||
| ND3 (size: 1045 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 16 (4.61%)
Alanine (Ala, A)
n = 41 (11.82%)
Serine (Ser, S)
n = 23 (6.63%)
Threonine (Thr, T)
n = 47 (13.54%)
Cysteine (Cys, C)
n = 3 (0.86%)
Valine (Val, V)
n = 15 (4.32%)
Leucine (Leu, L)
n = 66 (19.02%)
Isoleucine (Ile, I)
n = 20 (5.76%)
Methionine (Met, M)
n = 18 (5.19%)
Proline (Pro, P)
n = 21 (6.05%)
Phenylalanine (Phe, F)
n = 11 (3.17%)
Tyrosine (Tyr, Y)
n = 9 (2.59%)
Tryptophan (Trp, W)
n = 11 (3.17%)
Aspartic acid (Asp, D)
n = 2 (0.58%)
Glutamic acid (Glu, E)
n = 4 (1.15%)
Asparagine (Asn, N)
n = 9 (2.59%)
Glutamine (Gln, Q)
n = 13 (3.75%)
Histidine (His, H)
n = 6 (1.73%)
Lysine (Lys, K)
n = 8 (2.31%)
Arginine (Arg, R)
n = 5 (1.44%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 13 | 7 | 6 | 12 | 16 | 15 | 14 | 6 | 7 | 6 | 6 | 4 | 4 | 1 | 6 | 5 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 12 | 1 | 2 | 4 | 19 | 11 | 7 | 0 | 3 | 7 | 6 | 7 | 8 | 5 | 1 | 12 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 20 | 10 | 5 | 7 | 7 | 2 | 2 | 0 | 5 | 4 | 5 | 2 | 3 | 5 | 4 | 0 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 6 | 2 | 2 | 2 | 0 | 5 | 3 | 3 | 0 | 1 | 1 | 0 | 0 | 0 | 0 | 9 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 78 | 102 | 107 | 61 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 40 | 127 | 51 | 130 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 65 | 111 | 90 | 82 | ||||||||||||
| ND4 (size: 1381 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 28 (6.1%)
Alanine (Ala, A)
n = 43 (9.37%)
Serine (Ser, S)
n = 26 (5.66%)
Threonine (Thr, T)
n = 41 (8.93%)
Cysteine (Cys, C)
n = 5 (1.09%)
Valine (Val, V)
n = 19 (4.14%)
Leucine (Leu, L)
n = 88 (19.17%)
Isoleucine (Ile, I)
n = 37 (8.06%)
Methionine (Met, M)
n = 24 (5.23%)
Proline (Pro, P)
n = 28 (6.1%)
Phenylalanine (Phe, F)
n = 17 (3.7%)
Tyrosine (Tyr, Y)
n = 13 (2.83%)
Tryptophan (Trp, W)
n = 20 (4.36%)
Aspartic acid (Asp, D)
n = 4 (0.87%)
Glutamic acid (Glu, E)
n = 12 (2.61%)
Asparagine (Asn, N)
n = 13 (2.83%)
Glutamine (Gln, Q)
n = 9 (1.96%)
Histidine (His, H)
n = 11 (2.4%)
Lysine (Lys, K)
n = 10 (2.18%)
Arginine (Arg, R)
n = 12 (2.61%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 22 | 15 | 10 | 17 | 17 | 25 | 16 | 10 | 2 | 7 | 3 | 6 | 8 | 2 | 6 | 11 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 14 | 1 | 4 | 7 | 20 | 12 | 4 | 3 | 5 | 9 | 11 | 6 | 14 | 5 | 3 | 6 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 17 | 12 | 6 | 3 | 8 | 2 | 5 | 2 | 6 | 5 | 8 | 8 | 3 | 4 | 9 | 1 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 10 | 8 | 4 | 1 | 3 | 9 | 1 | 1 | 2 | 7 | 2 | 0 | 0 | 0 | 0 | 12 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 106 | 135 | 133 | 86 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 73 | 130 | 72 | 185 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 86 | 155 | 131 | 88 | ||||||||||||
| ND4L (size: 297 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 5 (5.1%)
Alanine (Ala, A)
n = 12 (12.24%)
Serine (Ser, S)
n = 6 (6.12%)
Threonine (Thr, T)
n = 10 (10.2%)
Cysteine (Cys, C)
n = 3 (3.06%)
Valine (Val, V)
n = 5 (5.1%)
Leucine (Leu, L)
n = 22 (22.45%)
Isoleucine (Ile, I)
n = 2 (2.04%)
Methionine (Met, M)
n = 5 (5.1%)
Proline (Pro, P)
n = 3 (3.06%)
Phenylalanine (Phe, F)
n = 7 (7.14%)
Tyrosine (Tyr, Y)
n = 0 (0%)
Tryptophan (Trp, W)
n = 1 (1.02%)
Aspartic acid (Asp, D)
n = 0 (0%)
Glutamic acid (Glu, E)
n = 3 (3.06%)
Asparagine (Asn, N)
n = 4 (4.08%)
Glutamine (Gln, Q)
n = 5 (5.1%)
Histidine (His, H)
n = 3 (3.06%)
Lysine (Lys, K)
n = 0 (0%)
Arginine (Arg, R)
n = 2 (2.04%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 1 | 1 | 3 | 2 | 7 | 9 | 0 | 1 | 5 | 0 | 1 | 1 | 2 | 1 | 4 | 3 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 2 | 2 | 1 | 3 | 5 | 3 | 1 | 0 | 4 | 1 | 0 | 0 | 0 | 2 | 1 | 1 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 5 | 3 | 1 | 1 | 3 | 0 | 0 | 1 | 1 | 0 | 0 | 1 | 3 | 2 | 2 | 2 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 1 | 2 | 1 | 0 | 0 | 0 | 0 | 0 | 1 | 1 | 0 | 0 | 0 | 1 | 0 | 0 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 25 | 31 | 23 | 20 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 13 | 29 | 16 | 41 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 11 | 35 | 33 | 20 | ||||||||||||
| ND5 (size: 1836 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 31 (5.07%)
Alanine (Ala, A)
n = 60 (9.82%)
Serine (Ser, S)
n = 43 (7.04%)
Threonine (Thr, T)
n = 61 (9.98%)
Cysteine (Cys, C)
n = 6 (0.98%)
Valine (Val, V)
n = 32 (5.24%)
Leucine (Leu, L)
n = 86 (14.08%)
Isoleucine (Ile, I)
n = 50 (8.18%)
Methionine (Met, M)
n = 31 (5.07%)
Proline (Pro, P)
n = 29 (4.75%)
Phenylalanine (Phe, F)
n = 39 (6.38%)
Tyrosine (Tyr, Y)
n = 12 (1.96%)
Tryptophan (Trp, W)
n = 14 (2.29%)
Aspartic acid (Asp, D)
n = 13 (2.13%)
Glutamic acid (Glu, E)
n = 10 (1.64%)
Asparagine (Asn, N)
n = 30 (4.91%)
Glutamine (Gln, Q)
n = 20 (3.27%)
Histidine (His, H)
n = 14 (2.29%)
Lysine (Lys, K)
n = 20 (3.27%)
Arginine (Arg, R)
n = 10 (1.64%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 28 | 22 | 15 | 15 | 15 | 30 | 16 | 9 | 9 | 11 | 11 | 9 | 5 | 7 | 19 | 20 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 16 | 2 | 4 | 8 | 26 | 22 | 4 | 7 | 8 | 4 | 12 | 8 | 14 | 7 | 0 | 14 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 25 | 12 | 10 | 6 | 10 | 11 | 3 | 4 | 9 | 6 | 6 | 2 | 1 | 11 | 19 | 3 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 11 | 7 | 3 | 5 | 8 | 10 | 10 | 0 | 0 | 7 | 3 | 0 | 0 | 0 | 1 | 12 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 146 | 149 | 205 | 112 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 74 | 180 | 120 | 238 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 99 | 206 | 160 | 147 | ||||||||||||
| ND6 (size: 522 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 21 (12.14%)
Alanine (Ala, A)
n = 21 (12.14%)
Serine (Ser, S)
n = 7 (4.05%)
Threonine (Thr, T)
n = 5 (2.89%)
Cysteine (Cys, C)
n = 4 (2.31%)
Valine (Val, V)
n = 26 (15.03%)
Leucine (Leu, L)
n = 28 (16.18%)
Isoleucine (Ile, I)
n = 2 (1.16%)
Methionine (Met, M)
n = 8 (4.62%)
Proline (Pro, P)
n = 6 (3.47%)
Phenylalanine (Phe, F)
n = 17 (9.83%)
Tyrosine (Tyr, Y)
n = 8 (4.62%)
Tryptophan (Trp, W)
n = 3 (1.73%)
Aspartic acid (Asp, D)
n = 3 (1.73%)
Glutamic acid (Glu, E)
n = 4 (2.31%)
Asparagine (Asn, N)
n = 2 (1.16%)
Glutamine (Gln, Q)
n = 1 (0.58%)
Histidine (His, H)
n = 1 (0.58%)
Lysine (Lys, K)
n = 2 (1.16%)
Arginine (Arg, R)
n = 4 (2.31%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 1 | 1 | 1 | 1 | 1 | 7 | 6 | 8 | 1 | 0 | 8 | 3 | 6 | 9 | 9 | 8 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 7 | 3 | 1 | 7 | 6 | 6 | 2 | 5 | 1 | 1 | 14 | 4 | 2 | 0 | 0 | 0 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 0 | 0 | 5 | 2 | 0 | 0 | 1 | 1 | 3 | 5 | 3 | 0 | 5 | 2 | 0 | 1 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 0 | 1 | 3 | 1 | 2 | 0 | 2 | 0 | 1 | 1 | 2 | 0 | 0 | 0 | 1 | 3 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 75 | 27 | 23 | 49 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 36 | 35 | 22 | 81 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 57 | 32 | 35 | 50 | ||||||||||||
| Total protein-coding genes (size: 11424 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 241 (6.34%)
Alanine (Ala, A)
n = 370 (9.73%)
Serine (Ser, S)
n = 230 (6.05%)
Threonine (Thr, T)
n = 303 (7.97%)
Cysteine (Cys, C)
n = 31 (0.81%)
Valine (Val, V)
n = 255 (6.7%)
Leucine (Leu, L)
n = 612 (16.09%)
Isoleucine (Ile, I)
n = 253 (6.65%)
Methionine (Met, M)
n = 172 (4.52%)
Proline (Pro, P)
n = 219 (5.76%)
Phenylalanine (Phe, F)
n = 239 (6.28%)
Tyrosine (Tyr, Y)
n = 115 (3.02%)
Tryptophan (Trp, W)
n = 118 (3.1%)
Aspartic acid (Asp, D)
n = 73 (1.92%)
Glutamic acid (Glu, E)
n = 96 (2.52%)
Asparagine (Asn, N)
n = 120 (3.15%)
Glutamine (Gln, Q)
n = 98 (2.58%)
Histidine (His, H)
n = 101 (2.66%)
Lysine (Lys, K)
n = 76 (2.0%)
Arginine (Arg, R)
n = 77 (2.02%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 160 | 93 | 63 | 130 | 99 | 182 | 96 | 79 | 59 | 39 | 69 | 60 | 83 | 43 | 97 | 142 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 109 | 11 | 20 | 57 | 153 | 123 | 37 | 32 | 45 | 78 | 86 | 60 | 89 | 49 | 21 | 70 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 118 | 80 | 35 | 40 | 62 | 53 | 20 | 10 | 45 | 43 | 72 | 22 | 26 | 47 | 73 | 19 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 82 | 68 | 28 | 28 | 45 | 51 | 25 | 7 | 10 | 45 | 15 | 0 | 0 | 3 | 3 | 96 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 1035 | 1002 | 979 | 789 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 522 | 1067 | 685 | 1531 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 605 | 1208 | 1112 | 880 | ||||||||||||
>NC_009578.1 Clupea pallasii mitochondrion, complete genome GCTAGTGTAGCTTAAACAAAGCATAACCTTGAAGATGTTAAGACGAGCCCTAGGAAAGCTCCACAAGCAC AAAAGTTTGGTCCTGGCTTTAATATCAGCTTTAACCCAATTTACACATGCAAGCCTCCGCAGCCCCGTGA GAATGCCCTCAATCCCCCGTCCGGGGACGAGGAGCCGGTATCAGGCACATAAATTTAGCCCAAGACGCCT TGCTTAGCCACACCCCCAAGGGAATTCAGCAGTGATAAACATTAAACCATAAGTGAAAACTTGACTTAGT CAGGGTTAAGAGGGCCGGTAAAACTCGTGCCAGCCACCGCGGTTATACGAGAGACCCTAGTTGATATACT CGGCGTAAAGAGTGGTTATGGAAAACAAGCACTAAAGCCAAAGAGCCCTCAGGCCGTTATACGCACCCGG GGCCTCGAACCACTATCACGAAAGTAGCTTTACCCTCGCCCACCAGAACCCACGAGAGCTGGGACACAAA CTGGGATTAGATACCCCACTATGCCCCGCCGTAAACTTAGATATATTAGTACAACAAATATCCGCCCGGG AACTACGAGCGCCAGCTTAAAACCCAAAGGACTTGGCGGTGCTTCAGACCCCCCTAGAGGAGCCTGTTCT AGAACCGATAACCCCCGTTCAACCTCACCACTCCTTGCCCCTCCCGCCTATATACCACCGTCGCCAGCTT ACCCTGTGAAGGTACTACAGTAAGCAGAATGAGCATTCCTCAGAACGTCAGGTCGAGGTGTAGCGTACGG AGTGGGATAGAAATGGGCTACATTATCTGAAACAGATTATTTACGAAAGGCCGCCTGAAATCAAGCACCC GAAGGTGGATTTAGCAGTAAAAAGGGAATAGAGTGCCCTTTTGAAGTTGGCTCTGAAGCGCGCACATACC GCCCGTCACTCTCCCCAGCGACCACCCAAAAAAGGTAAATAACGCAATAATAACAGCAAGGGGAGGCAAG TCGTAACATGGTAAGTATACCGGAAGGTGTACTTGGAATAATCAGGGCGTGGCTGAGGAGCCAAGCGACC CCCTTACACTGAGTAGACATCCGTGCGAATCGGATCGCCCTGAGCCAAACAGCTAGCTCAAACCACAAGA GCCTAAGTTAATAATATACATAGCTCTACATAAACTAGATTTAATTAAACTAAACCATTCGACCACCCCA GTATGGGCGACAAAAAAGGATAAACGAAGCCATAGATAAAGTACCGCAAGGGAAAGCTGAAAGAGAACTG AAACAACGCACTTAAGCACAGAAAAGCAGAGACTACCTCTCGTACCTTTTGCATCATGATCTAGCCAGTA AACCCAAGCAAAGAGAACTCTAGTTTGAACCCCCGAAACCAGACGAGCTACTCCGGGACAGCCTATAGTA GGGCCAACCCGTCTCTGTGGCAAAAGAGTGGGAAGATCCCCGAGTAGAGGTGAAAGACCTACCGAGTCCG GTTATAGCTGGTTGCTCAAGAAATGAATACAAGTTCAGCCCCGATACGCCCCTCGCCACAACAGTTTTAC TAAGACTAGGCAAAGGGACACTAACGGAAGTTAGTTGAAGGAGGTACAGCTCCCTCAACAAAGGACACAA CCTTCAACAGGAGGCTAAAGAATAAATTAAAACGAGGCCACAGGTTTCAGTGGGCCTAAAAGCAGCCATC TGAACAGAAAGCGTTAAAGCTCGGACCAGAACAAGCCTATTATAATATTATAACCTCTAATGCCCCTATT ACTACTGAGCCATCCTATGCCCACATAGGAGGGACCATGCTAGAACGAGTAACAAGAAGAATGAACTTCT CCCCGCACAAGTGTAAGTTGGATCGGACCCCCCACCAACAATTAACGAACCCAATAATAGAGGAGCCTAC ACCCCCGCCACCCTAGGCCAAGAAGACCACGTATTACCATATCGTTAACCCCACACAGGAGTGCTAGACA AGGGAAAGACTAAAAGGATGAAAAGGAACTCGGCAAACCGAAACCCCGCCTGTTTACCAAAAACACCGCC TCCTGCCCACACCACATAGGAGGTCCCGCCTGCCCAGTGACCAAAAGTTTAACGGCCGCGGTATTTTAAC CGTGCAAAGGTAGCGCAATCAATTGTCTTTTAAATGAAGACCTGTATGAATGGCATAACGAGGGTTTAAC TGTCTCTTTCTCCTGGTCAGTGAAACTGATCTACCCGTGCAGAAGCGGGCATGAATATACAAGACGAGAA GACCCTATGGAGCTTTAGACGCCCACCAATCACGAAAAGCAGGTCTCGCTCAACAGACCCCCAAACAACG TGATACTGGCACAAACGTCTTCGGTTGGGGCGACCGCGGGAGAGAAAAAAGCTCCCGAGAGGATTGGGGC TACCCTAAAACCAAGAGCTACACCTCTAAGTCACAAAACATTTGACCAAAAATGATCCGGCTACATGCCG ATTAACGAACCAAGTTACCCTAGGGATAACAGCGCAATCCCTTCCCAGAGTCCATATCGACGAAGGGGTT TACGACCTCGATGTTGGATCAGGACATCCTAATGGTGCAGCCGCTATTAAGGGTTCGTTTGTTCAACGAT TAAAGTCCTACGTGATCTGAGTTCAGACCGGAGTAATCCAGGTCAGTTTCTATCTGTAATAACACCCTTC CCAGTACGAAAGGACCGGAATGGTAAGGCCCATGCTTTAAGGTACGCCTCCCCCTGACCTGATGACTACA ACTAAAGTAGGTAAAAGGTGACAACTCTCAGCCCTAAGAGAAAGGCATACTAAGGTGGCAGAGCTTGGCA AATGCAGGAAGCCTAAGCCTTCCCTCCCAGAGGTTCAAATCCTCTCCTTAGTTATGCTCCACATTCTTAT TACACACGTCATTAATCCGCTTGCTTACATCGTCCCCGTATTACTAGCAGTTGCCTTCCTGACACTTATC GAACGAAAGGTGTTAGGGTATATACAGCTGCGGAAGGGTCCCAATGTAGTTGGCCCCTACGGGCTACTAC AGCCGATTGCAGACGGGGTCAAACTGTTTATTAAAGAACCCATTCGACCCTCCACTTCTTCCCCCTTCTT ATTTTTGGCGGCCCCTGCTCTGGCCCTTACCTTAGCGCTAACTCTCTGAGCCCCTATGCCCCTCCCTCAC CCTGTGACCGACATGAACCTTAGCATACTGTTCATTCTTGCACTCTCTAGCCTTGCGGTCTACTCTATTT TAGGCTCGGGCTGAGCGTCGAATTCCAAATACGCCCTAATTGGTGCACTACGGGCGGTAGCCCAAACTAT TTCCTATGAGGTAGCGTTGGGGTTAATTCTGCTTTCCACAATTATGTTTACCGGCGGTTTTACTCTGTCC ATGTTTAGCACCACACAAGAGGCTATCTGACTACTAGCGCCCGCCTGACCTCTAGCAGCGATATGGTACA CCTCTACTCTGGCGGAAACCAATCGGGCACCCTTTGACCTAACTGAGGGGGAATCAGAATTAGTCTCAGG CTTTAACGTAGAATATGCTGGGGGGCCCTTCGCACTATTCTTCCTTGCGGAATATGCTAATATTCTGTTC ATGAACACGCTCTCGGCCATTTTATTTATGGGCACCTCCTGCTTCCTTATGTTCCCCGAACTAACCACCG CCAATATCATGATGAAGGCTGCTTTACTATCAGCCCTCTTCCTGTGGGTCCGAGCCTCCTACCCCCGGTT CCGATATGATCAGTTAATGCACTTAGTGTGAAAAAACTTCCTACCCCTAACACTGGCTCTTATTCTGTGA CATCTTTCCATGCCAGTCAGTACGGCCGGACTTCCGCCTCAACTCTAGCACCCCGGAGCTGTGCCTGAAC GCCTAAGGGCCACTTTGATAGAGTGAGCTAAGAGGGTTAAACTCCCTCCAGCTTCTTAGAAAGAAGGGGC TCGAACCCATCCTCCAGAGATCAAAACTCTGGGTGCTTCCACTACACCACTTTCTAGTAAGGTCAGCTAA GTAAGCTTTCGGGCCCATACCCCGGACATGTTGGTTAAAATCCTTCCCCTACTAATGAGCCCCCTAGTAC TCGTTGTCCTTCTATCTAGCCTAGGCCTGGGAACCGCAATGACTTTTGCGAGCTCGCACTGACTCCTAGC ATGAATAGGCCTAGAAATTAATACCCTGGCCATCCTCCCTTTAATAGCACAACAGAATCACCCCCGGGCC ATGGAGGCCACAACCAAATACTTCCTTATCCAGGCCACAGCGGCAGCCATAATTCTCTTTGCTAGCACCA CCAATGCGTGAGCCTCTGGACAATGAGATATCACCTACCCCTCCCACCCAGTGACCGCCACCATTACTAT GGCAGCCTTAGCCATAAAGATTGGGCTAGCCCCAACACACTTCTGACTTCCAGAAGTTCTCCAAGGGGTC TCCCTTACCACCGGGCTGATTCTATCCACTTGACAAAAACTGGCCCCTTTTGCGCTTATTCTTCAAGTAG CAAACTATACCCCTCCTTATATGTTGACGGCCCTAGCCCTCTGCTCGACCCTTGTTGGGGGATGAGGAGG ACTTAATCAGACACAGCTGCGTAAGATCTTAGCATACTCATCAATCGCACACTTGGGGTGGATGATTCTG GTCGCTCAAATAGCACCCCAGCTGACGCTGATTGCTTTAATCACATATATTGTTATGACAACGGCAGCGT TCCTCACTCTTAACAACATGGATGCCACTAAAACTGTCACCTTAGCCTCCTCTTGAACTAAATCCCCCAC TCTGACCGCGATGGCCTGCTTGGTTCTTCTCTCTCTGGGAGGCCTCCCCCCGCTAACAGGGTTTCTACCT AAGTGGCTTATTCTCCAGGAGGTAACCAACCAAGGATTTATTCCAACAGCAACTGTTATGGCCCTATCTG CGCTGCTAAGCTTATATTTCTACCTACGACTCACCTACGCTATGTCCCTTACGCTCTTCCCCCACACTTT TAATTCTGTAACCCCTTGACGTATGACAGCCAAACGTCCAACCCTGCTCCTATCCACAACCATTATTATA ACTACGTGTCTCCTACCTCTCACTCCCTCTGCCCTGACCCTCCTGATCTAGGGGCTTAGGATAGCATTTA GACCATGAGCCTTCAAAGCTCCAAGCAGGAGTGAGAATCTCCTAGCCCCTGATAAGGCCTGCGGGACTTT ACCCCACAGCTTCTGGATGCAACCCAGACGCTTTAATTAAGCTAAGGCCTTTCTAGATGGGAAGGCCTCG ATCCTACAAACTCTTAGTTAACAGCTAAGCGCTCTAACCAGCGAGCATCCATCTACCTTTCCCCGCCGCC TCTAAAAAGGCGGGGAAAGCCCCGGCAGGCGCTAGCCTACGTCTTCAGGTTTGCAACCTGACATGAACTT CACCACAGAGCTTTGGTAAGGAGAGGAGTTAAACCTCTGTTATCGGGGCTACAATCCGCCGCCTAAGCCT TCGGCCACCCTACCTGTGGCAATTACACGTTGATTTTTCTCAACTAATCACAAAGATATTGGTACCCTTT ACCTAGTATTTGGTGCCTGAGCAGGAATGGTGGGCACAGCCCTAAGTCTCCTAATCCGTGCAGAACTTAG CCAACCTGGGGCCCTCCTTGGAGACGACCAGATCTATAATGTTATTGTTACTGCACATGCCTTCGTAATA ATTTTCTTTATAGTAATGCCGATTCTAATTGGAGGGTTTGGAAACTGACTAATTCCTCTTATGATCGGAG CGCCAGATATGGCATTCCCTCGAATAAACAACATGAGCTTCTGACTACTTCCCCCCTCATTCCTCCTACT CCTAGCCTCCTCCGGAGTTGAAGCCGGGGCGGGAACCGGGTGAACGGTATATCCTCCTCTGTCAGGTAAT CTGGCCCACGCAGGAGCATCAGTTGACCTAACCATTTTTTCACTTCATCTAGCAGGTATTTCCTCTATTC TAGGGGCCATCAATTTCATTACCACAATTATTAATATGAAACCACCCGCAATCTCACAATACCAAACGCC TCTGTTTGTCTGATCCGTTCTTGTTACAGCTGTTCTGCTTCTTCTATCGCTGCCTGTGCTAGCTGCCGGA ATTACAATGCTTCTTACAGATCGAAACCTAAACACCACCTTCTTCGACCCAGCAGGAGGGGGAGACCCAA TTCTTTACCAACACCTATTCTGATTTTTCGGACACCCGGAAGTGTATATTCTAATTCTTCCCGGGTTCGG AATGATTTCCCACATCGTAGCCTACTACGCGGGAAAGAAAGAACCCTTCGGATACATAGGAATGGTCTGA GCTATGATGGCCATCGGACTACTAGGGTTTATTGTATGAGCCCACCACATGTTCACCGTAGGAATGGATG TTGACACTCGAGCATACTTTACATCAGCAACTATAATTATTGCCATCCCAACCGGGGTTAAGGTATTTAG CTGACTTGCCACTCTCCACGGGGGCTCAATCAAATGGGAAACCCCACTTCTATGGGCCCTTGGGTTTATT TTCCTTTTCACAGTTGGGGGTCTAACAGGGATTGTCCTAGCCAATTCTTCATTAGATATTGTACTACACG ACACATACTACGTTGTAGCACACTTCCACTACGTTCTTTCCATGGGGGCCGTATTCGCCATTATAGCTGC ATTTGTACACTGATTCCCTCTATTTACAGGATACACCCTCCACAGCACCTGAACAAAAATCCACTTCGGA ATTATGTTCGTAGGTGTCAACCTAACTTTCTTCCCCCAACATTTCCTAGGCCTAGCAGGAATGCCACGGC GATACTCTGACTACCCCGACGCCTATACTCTTTGAAATACTGTGTCCTCAATCGGGTCACTTATTTCACT GGTAGCAGTAATTATGTTCTTGTTCATCCTTTGAGAAGCATTCGCTGCCAAACGAGAAGTATCGTCCGTG GAATTAACTATGACGAACGTTGAGTGACTACACGGATGCCCTCCTCCCTACCACACCTTTGAGGAGCCAG CCTTCGTGCAAGTGCAAGCAAAATAACGAGAAAGGGAGGAATCGAACCCCCATAAGATGGTTTCAAGCCA ACTGCATGGCCAATCTGCCACTTTCTTAAATAAGACACTAGTAAAATACATTACCTTGCCTTGTCAAGGC AAAATTGTGGGCTAATTCCCCGCGTGTCTTGGTCCAGAGCTAAATGGCACATCCCTCACAACTAGGATTG CAAGACGCGGCCTCCCCTGTAATAGAAGAACTCCTACATTTCCACGACCACGCGCTAATGATTGTCCTCT TGATTAGCACACTGGTCCTTTACATTATTGTGTCAATGGTCTCTACAAAACTTACTAATAAGTATATTCT AGATTCCCAAGAAATTGAGATTGTATGAACTATTCTCCCAGCAGTTATTCTAATTTTAATCGCACTCCCA TCTCTACGAATTCTATACCTTATAGACGAAATTAACGACCCCCACCTTACGATCAAAGCCATGGGACACC AATGGTACTGAAGCTACGAATATACAGACTATGAAGATCTCGGATTTGATTCTTACATAGTCCCCACCCA AGACCTAGTACCGGGACAGTTCCGACTCCTAGAGACAGACCACCGAATAGTAGTACCAATAGAGTCCCCG ATCCGGGTTCTCGTATCAGCTGAAGATGTATTACACTCTTGAGCGGTCCCTGCCTTAGGGGTAAAAATAG ACGCCGTTCCCGGGCGCTTAAACCAAACAGCTTTCATTGTCTCTCGCCCTGGTGTATTCTATGGACAATG TTCTGAAATCTGCGGGGCAAACCACAGCTTCATGCCAATCGTCGTGGAAGCCGTACCTCTTGTACACTTC GAAAACTGATCCTCACTTATACTTGAAGACGCCTCACTAAGATGCTAAATTGGGCCTGAGCGTCAGCCTT TTAAGCTGAAAATTGGTGGCCCCCAACCACCCTTAGTGACATGCCTCAATTAAACCCCGCCCCTTGATTC GCAATTCTTGTTTTCTCTTGAGTAGTTTTCCTGACTATTATCCCCCAAAAAATCTTAGCCCACAATTTCA ATAATGAGCCCACTACTATGGGGGCCGAAAAAGCCAAACCTGAACCCTGAAACTGACCATGATACTAAGC TTCTTTGACCAATTTATAAGCCCCACCTACCTGGGAATCCCCCTTATTGCACTAGCACTTGTACTTCCAT GAACTCTGTACCCCACCCCCACCCCACGATGATTAAACAGCCGACTTCTAACACTTCAGGGCTGGTTTAT CAACCGCTTTACTCAGCAAATCTTCATGCCTATTAACCCAGGAGGACACAAATGAGCGGTTATACTTGCA TCATTAATGGTTTTCTTAACTTCACTTAATATGCTAGGCCTTCTCCCCTACACCTTTACCCCCACAACCC AACTCTCATTAAACATGGGTCTTGCAGTCCCCCTATGACTTGCCACAGTAATTATTGGCATGCGAAATCA GCCAACTGCAGCTCTCGGTCACCTTCTGCCAGAGGGAACACCCGTTCTTCTCATTCCAGTGCTTATTATT ATTGAAACTATTAGCTTGTTTATCCGCCCCTTAGCACTTGGGGTTCGACTGACCGCCAATCTGACAGCAG GCCACTTACTTATTCAACTAATTGCCACAGCTGCATTCGTCCTACTTCCTCTAATGCCAACTGTAGCCAT CTTAACAGCCACTGTCCTATTCCTCCTCACCCTACTAGAAGTCGCCGTAGCAATGATCCAGGCGTATGTC TTTGTTCTTCTCCTAAGCCTCTACCTACAAGAAAACGTCTAATGGCCCACCAAGCACACGCATACCACAT GGTAGACCCAAGCCCCTGACCACTAACCGGAGCAGTTGGAGCCCTACTCCTGACGTCCGGCACCGCAATC TGATTCCACTTCCACTCAGTTACCCTAATAACTCTAGGAACCGTTCTAACACTTCTAACCATGTACCAAT GATGGCGAGATATTGTGCGAGAAGGGACATTCCAAGGTCACCACACCCCTCCTGTACAAAAAGGACTGCG CTATGGTATGATCTTATTCATTACATCCGAAGTATTCTTCTTTGCCGGGTTCTTCTGAGCATTTTATCAC TCGAGCTTGGCACCGACCCCTGAACTAGGGGGATGCTGACCCCCCACAGGCATTACCGCCCTCGATCCAT TCGAGGTCCCTCTTTTAAACACAGCAGTACTCCTAGCCTCCGGAGTAACCGTCACCTGGGCCCACCACAG CCTAATAGAAGGGGAACGAAAACAGGCAATTCAGTCACTTGCTTTGACCATCTTACTTGGGTTCTACTTT ACCTTCCTGCAGGGCCTAGAATACTATGAAGCTCCTTTTACTATTGCAGATGGTGTTTATGGCTCAACTT TCTTTGTAGCCACAGGATTCCACGGCCTACATGTTATCATCGGCTCTTCATTCCTGGCAGTCTGTTTTGT ACGCCAAGTACTTTACCATTTTACCTCGGCCCACCACTTTGGGTTTGAGGCAGCCGCCTGATACTGACAC TTCGTTGACGTAGTATGATTATTCTTATACGTCTCTATCTACTGATGAGGATCATAACCTTTCTAGTACA AAAGACAGTACAGGTGGCTTCCAACCATCTAATCTTGGTTAAAGTCCAAGGAAAGGTAATGAGCCTAATC ATAGTAGTTTTGGCAATTACACTTATCCTCTCCATTATCTTAGTGATCGTGTCATTTTGACTCCCTCAGA TAACCCCGGACGCAGAAAAATTATCCCCCTATGAGTGCGGTTTTGACCCCCGAGGATCTGCCCGTATGCC CTTCTCCTTACGATTCTTTCTAGTGGCAATCTTATTTCTGTTGTTTGACCTGGAAATTGCCCTGCTACTT CCCCTTCCCTGAGCCTACCAACTAGACAATCCAGTAATAACCGTCGTATGAGCCGGCGCTGTACTCGCCC TTCTAACACTGGGCCTAGTTTATGAATGACTTCAAGGAGGCCTTGAATGAGCCGAATAGGGAGTTAGTCC AACTGAAGACTTCTGGTTTCGGCCCAGAAAATTGTGGTTAAAATCCATAGCACCCTTATGACCCCGGTAC AATTCAGTTTTACCACGGCATTCATCCTAGGCCTAATAGGCCTAACATTTCACCGAACCCATCTCCTCTC TGCCCTACTCTGTCTAGAGGGCATAATGCTAGCACTCTTTGTTGCTTTGTCCCTCTGGACTCTTCAAACA GAAGTGACCAATTTTTCCGCGGCCCCAATATTGTTGCTAGCCTTCTCCGCTTGTGAAGCTAGCGTCGGAT TAGCCCTCCTCGTAGCAACAAACCGCACCCATGGCCCAAACCAACTACAAGCCCTTAATATTCTACAATG CTAAAAGTCCTCATCCCCACCTTAATATTGTTCCCGACCACATGGCTAGCCCCTAAAAAGTGATTATGGG CCACTACAACGTCCCACAGCCTTATTATTGCCCTAATTAGCCTTACCTGGCTTAACTGAACAGCAGAAAC AGGGTGGACCCTACCTAACAGCTACATAGCAATTGACCCCCTGTCTGCCCCCTTACTTGTCCTGGCCTGC TGACTTCTCCCCTTAATGATTCTTGCTAGCCAGAACCACACTCGGACTGAACCCATCTCCCGCCAACGAA CATTCATTTGCCTCCTGATCTCCCTCCAAGCCTTTCTAATCCTGGCATTCGGGGCCACAGAAATCCTCAT GTTTTATGTAATATTTGAGGCCACCCTGGTCCCCACACTAATTATTATTACCCGATGAGGAAATCAGGCA GAACGTCTAAACGCAGGAACCTACTTCCTTTTCTACACCCTAGCAGGATCACTACCACTACTGGTTGCCC TTCTAGCACTTCAGAACTCGACAGGGAGCTTGTCGATGATTATCCTGAATTTTAATCCACCCCTGGCCCT AGCGTCTTGAGGTGATATGATGTGGTGGGCAGCCTGCCTGATCGCCTTCCTAGTGAAAATGCCTCTATAT GGCGTACACTTATGACTTCCTAAAGCCCATGTAGAAGCCCCAATTGCCGGATCGATGGTACTGGCTGCTG TATTATTAAAACTAGGGGGCTACGGAATAATTCGAATATCCACAATTCTTGACCCGCTTACTAAAGAAGC GGCCTACCCTTTTATTGTCCTGGCCCTATGAGGTATTATTATAACGGGGTCGATCTGTCTCCGCCAGACA GACCTGAAATCACTGATCGCTTACTCTTCGGTTAGTCACATGGGCTTAGTAGCGGGGGGCATTCTTATCC AGACCCCCTGAGGGCTCACGGGTGCACTTATTCTTATAATTGCCCACGGACTCGTATCCTCCGCCCTCTT CTGCCTGGCAAACACCAGTTATGAACGAACCCACAGCCGAACTATGGCCCTAGCACGAGGAATACAGATG CTATTCCCCCTAACCGCTACGTGGTGATTTGTTGCTAACCTGGCTAACTTAGCATTGCCCCCCCTACCAA ATCTAATGGGGGAAGTAATAATTATTACGACCATATTCAACTGGTCCCCTTGAACACTCATCCTGACCGG ACTAGGAACATTAATTACGGCGGGGTATTCCCTCTACATGTTCCTAATGACTCAGCGAGGCCCAGTGCCC GAGCACATCAAAGGGCTCACCCCCTACCACACCCGGGAGCACCTACTCATCACCCTCCACCTCCTTCCCG TCATCCTCCTCGTCCTTAAACCGGAGCTAATCTGAGGGTGATTCTATTGCAGATCTAGTTTAACGAAAAC GCTGGATTGTGATTCCAGAAACAGGGGTTAAAATCCCCTGACCCGCCGAGAGAGACTTGTAGCGACAGAG ACTGCTAATCCCTGCCCCCGCAGTTAGATTCTGCGGCTCACTCGGCCTTTGAAGAATAACAGCTATCCGT GGTCTTAGGAACCAAAAACTCTTGGTGCAAATCCAAGCAAGGGCTATGCAGACCACGCTAATACTTACAT CATCACTTGTACTGATCTTTGCCCTCCTAGCATACCCCCTTATCACAACGATTAACCCTGCACCTAAGAA CCCAGATTGAGCCGTTACCCACGTCAAAACCGCAGTTAGTACTGCATTTGTGGTGAGCCTCCTGCCAATA TTTATTTTCTTAGACCAGGGGGTGGAAACTATTATTACGACCTGACACTGAATAAATACCTCAACCTTTA ATATCAGCATCAGCCTGAAGTTTGATTATTACTCCATTATATTTACCCCTATCGCCCTTTACGTGACCTG ATCAATTCTAGAGTTTGCCTCATGATATATACATGCGGACCCCTACATGAACCGATTCTTTAAGTATCTT CTGATATTTCTCATCGCCATGGTCATCCTAGTCACCGCTAACAACATGTTTCAACTATTTATTGGTTGAG AAGGTGTTGGGATCATGTCCTTTCTACTAATTGGGTGGTGATACGGCCGAGCTGATGCCAACACCGCGGC CCTCCAGGCTGTTATTTATAACCGGGTCGGTGATATCGGGCTAATCATAAGCATGGCTTGATTCGCAATA AACCTAAACTCCTGAGAAATACAGCAAATTTTCTCTTTATCACACAACATAGACATAACGCTTCCCCTAT TTGGACTAATTATCGCCGCAACAGGGAAGTCGGCACAATTCGGACTACACCCCTGGCTCCCCTCCGCAAT GGAGGGGCCCACACCAGTATCTGCCCTGTTACACTCAAGTACAATGGTAGTAGCAGGGATTTTCCTCCTC ATCCGACTTCACCCCCTCACTCAGTCAAACCAGACGGCATTAACCACCTGCCTTTGTCTGGGTGCACTAA CTACCCTATTCACAGCCACATGCGCTCTTACCCAGAACGACATCAAGAAAATTGTAGCATTCTCTACTTC GAGCCAGCTAGGCCTGATGATAGTCACTATTGGCCTAAATCAGCCCCAACTGGCATTTCTGCACATCTGC ACCCATGCATTTTTTAAAGCAATGCTGTTCCTGTGCTCCGGCTCCATTATTCACAGCCTAAATGACGAAC AAGACATTCGAAAGATGGGGGGACTACACAACCTCGCACCCTTTACCTCTACTTGTCTAACTATCGGCAG CCTGGCCCTCACAGGGACCCCCTTCTTAGCGGGCTTCTTCTCCAAAGATGCAATCATTGAAGCCCTTAAT AACTCCTACCTAAACGCCTGAGCCCTGATCCTTACGCTAATCGCGACTTCCTTTACTGCCGTTTATAGCT TCCGAGTTGTCTTCTTCGTCGCCATGGGGACACCCCGATTCCTACCTCTATCTCCCATTAACGAAAACGA CCCAGCAGTGATTAACCCAATCAAACGGCTCGCCTGAGGGAGTATCGTGGCCGGTTTAATCCTCACCTCG AATACTATTCCAACGAAGACCCCTATTATAACCATGCCACCCCTCCTAAAACTGGCTGCCCTTATCGTCA CGATTATTGGCCTTTTAACAGCCATTGAACTAGCTACACTTACCTCAAAACAATTTAAAACTACCCCTAA TATTAAGCTCCATAATTTCTCAAATATACTAGGTCACTTCCCTGCAACGGTTCACCGAGCAGCCCCTAAG ATAAACCTAGTTTTAGGACAAACGATGGCCAATCAACTGGTTGACCAGTCCTGATTCGAGGCCTCTGGGC CCAAAGGCCTGGCCTCAACCCAGATGAAGATGGCCACTGTTACAAGTAATGCCCAACGGGGTATTATTAA AACCTATCTATTGGTGTTCCTAGTTACCCTAACTTTAGCAGTCCTCCTTGCTGCAAGCTAGACAGCCCGC AGGGGCCCTCGGCTCAACCCCCGCACGAGCTCCAAGACCACAAACAGCGTTAGTAGTAGTACTCAGGCGC AAAACACTAGCATGAAACCACCCGATCCATACATTGCAACCACACCCCCCATGTCGGCGCGGATCGTAAA AAACTTGCTACAGCTATCTACTATCCCAACAAATAGCGTATATCAATGCTTACCAAAGTATAGCCCTGCA GCAACCACCCCTAATAAATAGAAGGCAAGTTGCTCGAATACCGTCACTTCCGTTCAACCCTCGGGGAAAG GGTCAGCTGCTAAAGCAGAAGAGTAATTGAATACAACCAGCATCCCCCCCAGATAAATCAAGAATAAAAC TAAAGCCAAGAAAGGCGCCCCACTCACTGCCAAAACGGCACAGCCCATCCCCGCAGCAACTACCAGCCCA AAGGCTGCGAAGTAAGGAGCAGGATTACATGCCACCCCCACCAGCCCTAGGACTAACCCAACTAATAACA TAAAGGCAAAATATACCATAATTTCCACCCGGACTCTAACCGGAACTAATGACTCGAAAAACCACCGTTG TCATTCAACTATAGAAACCCTAATGGCAAGCCTACGAAAAACCCACCCCCTTCTAAAAATTGCTAACGGC GCACTAGTGGACCTCCCAGCTCCCTCCAATATTTCAGTCTGATGAAACTTTGGGTCCCTGCTCGGATTAT GCCTAGCGGCACAAATCTTAACAGGACTGTTTTTAGCTATACACTACACTTCCGATATCGCAACCGCATT CTCCTCTGTAATACACATTTGCCGAGATGTAAACTATGGGTGATTAATCCGAAACATGCACGCAAACGGA GCATCATTCTTCTTCATCTGCATTTATGCACATATCGCCCGAGGACTATACTACGGATCATACCTTTACA AGGAAACATGAACCATTGGGGTCGTCCTTCTCCTTCTAGTTATGATAACTGCCTTTGTAGGATACGTCCT ACCATGAGGGCAAATGTCATTCTGAGGGGCCACTGTCATTACTAACCTAATATCCGCCGTTCCGTATGTA GGTAACGCACTAGTTCAGTGAATTTGAGGGGGATTTTCTGTAGACAACGCTACTTTAACCCGATTCTTCG CCTTCCATTTCCTATTCCCATTTGTGATTGCAGGAGCTACTATTCTCCATCTTCTGTTCCTCCACGAAAC AGGATCAAACAACCCGGCAGGACTTAACTCCGACTCTGATAAAATCTCGTTCCACCCGTACTTCTCTTAC AAAGATGCCCTAGGGTTTGCAGTCATGCTATTAGCTCTCACCTCCCTGGCCCTCTTCGCCCCTAACCTCC TTGGAGATCCGGACAACTTCACGCCAGCCAACCCGCTGGTTACTCCCCCTCATATTAAGCCGGAGTGGTA CTTCCTGTTTGCATACGCCATTCTTCGATCAATTCCGAACAAGTTGGGAGGGGTGCTTGCTCTTCTATTC TCAATTCTGGTCCTTCTGCTTGTTCCTATTCTGCACACCTCGAAACAACGGGGCCTAACATTCCGACCTA TGACACAGTTTTTATTCTGAGCCCTGGCCGCAGATGTAATTATCTTAACATGAATTGGAGGAATGCCAGT AGAACACCCCTTTGTTATTATTGGGCAAGTTGCATCAGTCGTGTACTTCTCATTATTCTTATTCCTTTCA CCCCTCGCAGGGCTGGTGGAAAATAAAGCTCTAAGCTGAAACTGCCCCAATAGCTTAATTCGAAGCGCCG GTTTTGTAATCCGGAGATCGGAGGTTAAAATCCCCCTTGAGGCTCAGAGAAGAAAGATTCTAACTTCCAC CCCTAACTCCCAAAGCTAGGATTCTGAATTTAACTATTCTCTGATTATAATCTGTACCCGCCGCCCAAGC TCGAGGCGAGGGACAGCAGCGCCCCTAATATGTAAACGTTTGAGCTATGTCTTTCCATAACTGCAATATC ACACGGTTTAGTACATGACCACGCCTATGTACAGTGTTACACTTTAGCACTAATCCCCATATGTATAATA GAATACATATGGGGGTATAGCACATGTGTGTATTATTATACATGTACCTATGTATTGATACATGGATGTA TAACTATGCATATACCTATGGTATTAGTACATCTATGTATTATCACCATACGCTGAAATTACCCTATCAG GAAATTGATTAAGTGAAGAAATACATCGACATAATTATAAATCCGAGCTCATCATTAAAATCACCTGATA AATAGAATAATCCCCATAACTTCTTTAAACCAGTTTCCATGCGTTACTCAATACTGATCGGTAACTCAAA CGATTACCCAATAAGAACCGACCAACCAAATTGAGTTAAGGCATATCATGAATGATAAGGGTCAGGGACA CAAATCGTGGGGGTTACACAGAATGAATTATTACTGGCATCTGGTTCCTATTTCAGGGCCATACAGTCCT TTTCCCTCCCCTGGTGAACTATATCTTACATAGGTTAATGGTAGTGTACTAATGGTTCTTTACCCACCAT GCCGAGCGTTCACTTAAATGCATTTGGTATTTTTTTCTGGGGTCACTTTCACTTTGCATTTGACGAGTCC TTCCTATTGTTAACTAATAAGGGAGCACATTTCCTTGCTTGAACGTAATATAGCTTCAATACTTCATCAA CATTGATAGAAGACTTGCATAAACTTATCTAGTGCATAAGGTATCAATCTTAACTCCAAATACTCCTACT GTAGTGTCCCCCCCTGGCTTTTAAAAGATTTTTTCGCGCGACAAACCCCCCTACCCCCCTACGCTGGTCG AATCTTATTATTTCTGTCAAACCCCAAAAGCAGAGAAGGCTCGACTAGCGTATTCAACGAGTTTCGGTGT GTGTTGTGTATACAGTGTCACAAAAAAGCGTTATTATATA
Contact: Vadim E. Fraifeld, MD, PhD
Head: Lab for the Biology of Aging, The Shraga Segal Department of Microbiology, Immunology and Genetics, Faculty of Health Sciences, Ben-Gurion University of the Negev
P.O. Box 653, Beer-Sheva 8410501, Israel
Email:
Head: Lab for the Biology of Aging, The Shraga Segal Department of Microbiology, Immunology and Genetics, Faculty of Health Sciences, Ben-Gurion University of the Negev
P.O. Box 653, Beer-Sheva 8410501, Israel
Email:
- How to cite us:
-
If you would like to cite this database please use:
Toren D, Barzilay T, Tacutu R, Lehmann G, Muradian KK, Fraifeld VE. MitoAge: a database for comparative analysis of mitochondrial DNA, with a special focus on animal longevity. Nucleic Acids Res. 2016; 44(D1):D1262-5.
-
Quick links:
- Terms of use
- User guide
- Frequent questions
- Glossary & definitions