Viewing data for Ochotona princeps
| Scientific name | Ochotona princeps |
| Common name | North American pika |
| Maximum lifespan | 7.00 years (Ochotona princeps@AnAge) |
| Total mtDNA (size: 16481 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 7078 | 9403 | 4807 | 2271 | 4270 | 5133 |
| Base content per 1 kb (bases) | 429 | 571 | 292 | 138 | 259 | 311 |
| Base content (%) | 42.9% | 57.1% | ||||
| Total protein-coding genes (size: 11332 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 4921 | 6411 | 3563 | 1358 | 2980 | 3431 |
| Base content per 1 kb (bases) | 434 | 566 | 314 | 120 | 263 | 303 |
| Base content (%) | 43.4% | 56.6% | ||||
| D-loop (size: 1057 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 471 | 586 | 270 | 201 | 303 | 283 |
| Base content per 1 kb (bases) | 446 | 554 | 255 | 190 | 287 | 268 |
| Base content (%) | 44.6% | 55.4% | ||||
| Total tRNA-coding genes (size: 1506 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 590 | 916 | 353 | 237 | 398 | 518 |
| Base content per 1 kb (bases) | 392 | 608 | 234 | 157 | 264 | 344 |
| Base content (%) | 39.2% | 60.8% | ||||
| Total rRNA-coding genes (size: 2530 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 1071 | 1459 | 606 | 465 | 578 | 881 |
| Base content per 1 kb (bases) | 423 | 577 | 240 | 184 | 228 | 348 |
| Base content (%) | 42.3% | 57.7% | ||||
| 12S rRNA gene (size: 962 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 407 | 555 | 232 | 175 | 223 | 332 |
| Base content per 1 kb (bases) | 423 | 577 | 241 | 182 | 232 | 345 |
| Base content (%) | 42.3% | 57.7% | ||||
| 16S rRNA gene (size: 1568 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 664 | 904 | 374 | 290 | 355 | 549 |
| Base content per 1 kb (bases) | 423 | 577 | 239 | 185 | 226 | 350 |
| Base content (%) | 42.3% | 57.7% | ||||
| ATP6 (size: 680 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 298 | 382 | 225 | 73 | 188 | 194 |
| Base content per 1 kb (bases) | 438 | 562 | 331 | 107 | 276 | 285 |
| Base content (%) | 43.8% | 56.2% | ||||
| ATP8 (size: 207 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 80 | 127 | 66 | 14 | 59 | 68 |
| Base content per 1 kb (bases) | 386 | 614 | 319 | 68 | 285 | 329 |
| Base content (%) | 38.6% | 61.4% | ||||
| COX1 (size: 1542 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 689 | 853 | 435 | 254 | 437 | 416 |
| Base content per 1 kb (bases) | 447 | 553 | 282 | 165 | 283 | 270 |
| Base content (%) | 44.7% | 55.3% | ||||
| COX2 (size: 684 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 278 | 406 | 186 | 92 | 179 | 227 |
| Base content per 1 kb (bases) | 406 | 594 | 272 | 135 | 262 | 332 |
| Base content (%) | 40.6% | 59.4% | ||||
| COX3 (size: 784 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 355 | 429 | 236 | 119 | 219 | 210 |
| Base content per 1 kb (bases) | 453 | 547 | 301 | 152 | 279 | 268 |
| Base content (%) | 45.3% | 54.7% | ||||
| CYTB (size: 1138 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 536 | 602 | 388 | 148 | 276 | 326 |
| Base content per 1 kb (bases) | 471 | 529 | 341 | 130 | 243 | 286 |
| Base content (%) | 47.1% | 52.9% | ||||
| ND1 (size: 955 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 435 | 520 | 317 | 118 | 247 | 273 |
| Base content per 1 kb (bases) | 455 | 545 | 332 | 124 | 259 | 286 |
| Base content (%) | 45.5% | 54.5% | ||||
| ND2 (size: 1042 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 436 | 606 | 341 | 95 | 257 | 349 |
| Base content per 1 kb (bases) | 418 | 582 | 327 | 91 | 247 | 335 |
| Base content (%) | 41.8% | 58.2% | ||||
| ND3 (size: 346 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 145 | 201 | 102 | 43 | 102 | 99 |
| Base content per 1 kb (bases) | 419 | 581 | 295 | 124 | 295 | 286 |
| Base content (%) | 41.9% | 58.1% | ||||
| ND4 (size: 1378 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 586 | 792 | 437 | 149 | 373 | 419 |
| Base content per 1 kb (bases) | 425 | 575 | 317 | 108 | 271 | 304 |
| Base content (%) | 42.5% | 57.5% | ||||
| ND4L (size: 297 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 118 | 179 | 83 | 35 | 95 | 84 |
| Base content per 1 kb (bases) | 397 | 603 | 279 | 118 | 320 | 283 |
| Base content (%) | 39.7% | 60.3% | ||||
| ND5 (size: 1812 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 758 | 1054 | 574 | 184 | 480 | 574 |
| Base content per 1 kb (bases) | 418 | 582 | 317 | 102 | 265 | 317 |
| Base content (%) | 41.8% | 58.2% | ||||
| ND6 (size: 525 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 225 | 300 | 187 | 38 | 89 | 211 |
| Base content per 1 kb (bases) | 429 | 571 | 356 | 72 | 170 | 402 |
| Base content (%) | 42.9% | 57.1% | ||||
| ATP6 (size: 680 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
Amino acid frequencies:
Glycine (Gly, G)
n = 12 (5.33%) 
Alanine (Ala, A)
n = 17 (7.56%) 
Serine (Ser, S)
n = 13 (5.78%) 
Threonine (Thr, T)
n = 22 (9.78%) 
Cysteine (Cys, C)
n = 0 (0%) 
Valine (Val, V)
n = 8 (3.56%) 
Leucine (Leu, L)
n = 43 (19.11%) 
Isoleucine (Ile, I)
n = 30 (13.33%) 
Methionine (Met, M)
n = 12 (5.33%) 
Proline (Pro, P)
n = 15 (6.67%) 
Phenylalanine (Phe, F)
n = 12 (5.33%) 
Tyrosine (Tyr, Y)
n = 3 (1.33%) 
Tryptophan (Trp, W)
n = 3 (1.33%) 
Aspartic acid (Asp, D)
n = 1 (0.44%) 
Glutamic acid (Glu, E)
n = 3 (1.33%) 
Asparagine (Asn, N)
n = 9 (4.0%) 
Glutamine (Gln, Q)
n = 8 (3.56%) 
Histidine (His, H)
n = 6 (2.67%) 
Lysine (Lys, K)
n = 4 (1.78%) 
Arginine (Arg, R)
n = 5 (2.22%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 11 | 19 | 11 | 6 | 13 | 10 | 4 | 10 | 8 | 0 | 0 | 4 | 4 | 0 | 5 | 7 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 1 | 0 | 0 | 3 | 7 | 7 | 0 | 3 | 6 | 1 | 2 | 4 | 6 | 5 | 0 | 3 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 11 | 8 | 0 | 2 | 4 | 4 | 0 | 0 | 3 | 1 | 2 | 1 | 0 | 3 | 6 | 2 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 4 | 2 | 1 | 1 | 0 | 4 | 0 | 0 | 2 | 3 | 0 | 0 | 0 | 0 | 0 | 2 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 41 | 67 | 80 | 38 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 23 | 64 | 34 | 105 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 9 | 94 | 79 | 44 | ||||||||||||
| ATP8 (size: 207 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: MPQLDTSTWFITILSMLVSLFSLIQLKFHKYTFPANPSPASLKSTKQITPWESKWTKIYSPLSLPPQL* | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 0 (0%)
Alanine (Ala, A)
n = 2 (2.94%)
Serine (Ser, S)
n = 10 (14.71%)
Threonine (Thr, T)
n = 7 (10.29%)
Cysteine (Cys, C)
n = 0 (0%)
Valine (Val, V)
n = 1 (1.47%)
Leucine (Leu, L)
n = 10 (14.71%)
Isoleucine (Ile, I)
n = 5 (7.35%)
Methionine (Met, M)
n = 2 (2.94%)
Proline (Pro, P)
n = 8 (11.76%)
Phenylalanine (Phe, F)
n = 4 (5.88%)
Tyrosine (Tyr, Y)
n = 2 (2.94%)
Tryptophan (Trp, W)
n = 3 (4.41%)
Aspartic acid (Asp, D)
n = 1 (1.47%)
Glutamic acid (Glu, E)
n = 1 (1.47%)
Asparagine (Asn, N)
n = 1 (1.47%)
Glutamine (Gln, Q)
n = 4 (5.88%)
Histidine (His, H)
n = 1 (1.47%)
Lysine (Lys, K)
n = 6 (8.82%)
Arginine (Arg, R)
n = 0 (0%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 2 | 3 | 1 | 2 | 0 | 4 | 1 | 3 | 4 | 0 | 0 | 1 | 0 | 0 | 1 | 3 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 1 | 0 | 0 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 3 | 4 | 1 | 0 | 2 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 2 | 2 | 1 | 2 | 3 | 4 | 0 | 0 | 1 | 1 | 1 | 0 | 0 | 1 | 0 | 0 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 1 | 0 | 1 | 0 | 1 | 6 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 3 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 5 | 20 | 22 | 22 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 4 | 26 | 17 | 22 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 5 | 20 | 29 | 15 | ||||||||||||
| COX1 (size: 1542 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 47 (9.16%)
Alanine (Ala, A)
n = 44 (8.58%)
Serine (Ser, S)
n = 32 (6.24%)
Threonine (Thr, T)
n = 33 (6.43%)
Cysteine (Cys, C)
n = 1 (0.19%)
Valine (Val, V)
n = 38 (7.41%)
Leucine (Leu, L)
n = 58 (11.31%)
Isoleucine (Ile, I)
n = 39 (7.6%)
Methionine (Met, M)
n = 32 (6.24%)
Proline (Pro, P)
n = 29 (5.65%)
Phenylalanine (Phe, F)
n = 42 (8.19%)
Tyrosine (Tyr, Y)
n = 19 (3.7%)
Tryptophan (Trp, W)
n = 17 (3.31%)
Aspartic acid (Asp, D)
n = 15 (2.92%)
Glutamic acid (Glu, E)
n = 10 (1.95%)
Asparagine (Asn, N)
n = 16 (3.12%)
Glutamine (Gln, Q)
n = 6 (1.17%)
Histidine (His, H)
n = 18 (3.51%)
Lysine (Lys, K)
n = 9 (1.75%)
Arginine (Arg, R)
n = 8 (1.56%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 23 | 16 | 26 | 12 | 5 | 29 | 2 | 9 | 5 | 1 | 7 | 15 | 15 | 1 | 9 | 33 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 6 | 0 | 1 | 8 | 21 | 13 | 2 | 8 | 18 | 17 | 4 | 9 | 10 | 9 | 1 | 2 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 11 | 19 | 1 | 4 | 14 | 10 | 1 | 0 | 3 | 6 | 13 | 1 | 1 | 9 | 7 | 5 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 13 | 8 | 2 | 6 | 9 | 9 | 0 | 1 | 2 | 5 | 0 | 0 | 0 | 0 | 1 | 16 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 154 | 109 | 132 | 119 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 76 | 135 | 94 | 209 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 24 | 191 | 190 | 109 | ||||||||||||
| COX2 (size: 684 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 8 (3.52%)
Alanine (Ala, A)
n = 10 (4.41%)
Serine (Ser, S)
n = 23 (10.13%)
Threonine (Thr, T)
n = 15 (6.61%)
Cysteine (Cys, C)
n = 2 (0.88%)
Valine (Val, V)
n = 12 (5.29%)
Leucine (Leu, L)
n = 32 (14.1%)
Isoleucine (Ile, I)
n = 18 (7.93%)
Methionine (Met, M)
n = 17 (7.49%)
Proline (Pro, P)
n = 14 (6.17%)
Phenylalanine (Phe, F)
n = 7 (3.08%)
Tyrosine (Tyr, Y)
n = 9 (3.96%)
Tryptophan (Trp, W)
n = 5 (2.2%)
Aspartic acid (Asp, D)
n = 11 (4.85%)
Glutamic acid (Glu, E)
n = 14 (6.17%)
Asparagine (Asn, N)
n = 5 (2.2%)
Glutamine (Gln, Q)
n = 6 (2.64%)
Histidine (His, H)
n = 8 (3.52%)
Lysine (Lys, K)
n = 5 (2.2%)
Arginine (Arg, R)
n = 6 (2.64%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 6 | 12 | 13 | 7 | 4 | 14 | 2 | 3 | 6 | 0 | 4 | 1 | 7 | 0 | 5 | 2 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 4 | 1 | 1 | 2 | 5 | 3 | 0 | 1 | 3 | 4 | 0 | 3 | 1 | 10 | 0 | 2 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 4 | 9 | 0 | 2 | 7 | 9 | 0 | 2 | 3 | 5 | 4 | 0 | 2 | 1 | 4 | 1 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 7 | 11 | 3 | 3 | 8 | 5 | 0 | 1 | 2 | 3 | 0 | 0 | 0 | 1 | 0 | 5 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 55 | 61 | 65 | 47 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 26 | 57 | 59 | 86 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 11 | 68 | 103 | 46 | ||||||||||||
| COX3 (size: 784 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 21 (8.08%)
Alanine (Ala, A)
n = 15 (5.77%)
Serine (Ser, S)
n = 20 (7.69%)
Threonine (Thr, T)
n = 23 (8.85%)
Cysteine (Cys, C)
n = 2 (0.77%)
Valine (Val, V)
n = 17 (6.54%)
Leucine (Leu, L)
n = 34 (13.08%)
Isoleucine (Ile, I)
n = 13 (5.0%)
Methionine (Met, M)
n = 9 (3.46%)
Proline (Pro, P)
n = 11 (4.23%)
Phenylalanine (Phe, F)
n = 23 (8.85%)
Tyrosine (Tyr, Y)
n = 11 (4.23%)
Tryptophan (Trp, W)
n = 12 (4.62%)
Aspartic acid (Asp, D)
n = 3 (1.15%)
Glutamic acid (Glu, E)
n = 8 (3.08%)
Asparagine (Asn, N)
n = 8 (3.08%)
Glutamine (Gln, Q)
n = 8 (3.08%)
Histidine (His, H)
n = 16 (6.15%)
Lysine (Lys, K)
n = 2 (0.77%)
Arginine (Arg, R)
n = 5 (1.92%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 7 | 6 | 7 | 4 | 9 | 13 | 1 | 5 | 8 | 0 | 3 | 6 | 8 | 0 | 10 | 13 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 2 | 0 | 2 | 0 | 8 | 6 | 1 | 2 | 10 | 8 | 1 | 2 | 3 | 6 | 0 | 5 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 10 | 8 | 0 | 5 | 6 | 6 | 0 | 0 | 3 | 3 | 8 | 3 | 2 | 3 | 5 | 5 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 11 | 7 | 1 | 1 | 2 | 2 | 0 | 0 | 1 | 3 | 1 | 0 | 0 | 0 | 0 | 9 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 64 | 67 | 58 | 72 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 43 | 66 | 56 | 96 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 12 | 103 | 96 | 50 | ||||||||||||
| CYTB (size: 1138 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 25 (6.61%)
Alanine (Ala, A)
n = 25 (6.61%)
Serine (Ser, S)
n = 23 (6.08%)
Threonine (Thr, T)
n = 27 (7.14%)
Cysteine (Cys, C)
n = 4 (1.06%)
Valine (Val, V)
n = 18 (4.76%)
Leucine (Leu, L)
n = 60 (15.87%)
Isoleucine (Ile, I)
n = 37 (9.79%)
Methionine (Met, M)
n = 13 (3.44%)
Proline (Pro, P)
n = 22 (5.82%)
Phenylalanine (Phe, F)
n = 27 (7.14%)
Tyrosine (Tyr, Y)
n = 15 (3.97%)
Tryptophan (Trp, W)
n = 12 (3.17%)
Aspartic acid (Asp, D)
n = 12 (3.17%)
Glutamic acid (Glu, E)
n = 5 (1.32%)
Asparagine (Asn, N)
n = 16 (4.23%)
Glutamine (Gln, Q)
n = 7 (1.85%)
Histidine (His, H)
n = 13 (3.44%)
Lysine (Lys, K)
n = 10 (2.65%)
Arginine (Arg, R)
n = 8 (2.12%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 4 | 33 | 10 | 6 | 20 | 27 | 3 | 4 | 7 | 0 | 2 | 9 | 7 | 0 | 7 | 20 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 3 | 0 | 4 | 2 | 12 | 11 | 0 | 3 | 13 | 8 | 1 | 2 | 4 | 16 | 0 | 2 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 14 | 11 | 0 | 4 | 5 | 11 | 0 | 0 | 3 | 3 | 12 | 1 | 0 | 2 | 14 | 0 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 13 | 2 | 3 | 2 | 10 | 10 | 0 | 0 | 2 | 6 | 0 | 0 | 0 | 0 | 0 | 11 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 85 | 106 | 106 | 82 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 52 | 94 | 78 | 155 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 11 | 188 | 141 | 39 | ||||||||||||
| ND1 (size: 955 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 13 (4.1%)
Alanine (Ala, A)
n = 32 (10.09%)
Serine (Ser, S)
n = 18 (5.68%)
Threonine (Thr, T)
n = 20 (6.31%)
Cysteine (Cys, C)
n = 1 (0.32%)
Valine (Val, V)
n = 15 (4.73%)
Leucine (Leu, L)
n = 57 (17.98%)
Isoleucine (Ile, I)
n = 27 (8.52%)
Methionine (Met, M)
n = 17 (5.36%)
Proline (Pro, P)
n = 22 (6.94%)
Phenylalanine (Phe, F)
n = 22 (6.94%)
Tyrosine (Tyr, Y)
n = 12 (3.79%)
Tryptophan (Trp, W)
n = 9 (2.84%)
Aspartic acid (Asp, D)
n = 5 (1.58%)
Glutamic acid (Glu, E)
n = 10 (3.15%)
Asparagine (Asn, N)
n = 13 (4.1%)
Glutamine (Gln, Q)
n = 6 (1.89%)
Histidine (His, H)
n = 4 (1.26%)
Lysine (Lys, K)
n = 7 (2.21%)
Arginine (Arg, R)
n = 8 (2.52%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 11 | 16 | 15 | 5 | 16 | 26 | 3 | 7 | 6 | 0 | 0 | 5 | 10 | 0 | 5 | 17 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 2 | 1 | 0 | 5 | 13 | 14 | 0 | 2 | 5 | 6 | 0 | 4 | 11 | 7 | 0 | 2 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 10 | 6 | 2 | 1 | 10 | 6 | 0 | 0 | 1 | 1 | 11 | 1 | 0 | 2 | 11 | 1 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 3 | 8 | 2 | 0 | 5 | 7 | 0 | 0 | 2 | 5 | 1 | 0 | 0 | 0 | 0 | 8 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 75 | 90 | 85 | 68 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 32 | 91 | 57 | 138 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 11 | 136 | 131 | 40 | ||||||||||||
| ND2 (size: 1042 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 16 (4.62%)
Alanine (Ala, A)
n = 22 (6.36%)
Serine (Ser, S)
n = 24 (6.94%)
Threonine (Thr, T)
n = 35 (10.12%)
Cysteine (Cys, C)
n = 1 (0.29%)
Valine (Val, V)
n = 5 (1.45%)
Leucine (Leu, L)
n = 65 (18.79%)
Isoleucine (Ile, I)
n = 37 (10.69%)
Methionine (Met, M)
n = 30 (8.67%)
Proline (Pro, P)
n = 19 (5.49%)
Phenylalanine (Phe, F)
n = 12 (3.47%)
Tyrosine (Tyr, Y)
n = 12 (3.47%)
Tryptophan (Trp, W)
n = 11 (3.18%)
Aspartic acid (Asp, D)
n = 3 (0.87%)
Glutamic acid (Glu, E)
n = 5 (1.45%)
Asparagine (Asn, N)
n = 20 (5.78%)
Glutamine (Gln, Q)
n = 10 (2.89%)
Histidine (His, H)
n = 5 (1.45%)
Lysine (Lys, K)
n = 12 (3.47%)
Arginine (Arg, R)
n = 3 (0.87%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 15 | 22 | 27 | 6 | 27 | 25 | 2 | 5 | 10 | 0 | 1 | 3 | 1 | 0 | 5 | 7 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 3 | 0 | 1 | 0 | 15 | 7 | 0 | 2 | 8 | 5 | 1 | 2 | 11 | 6 | 0 | 2 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 16 | 17 | 0 | 1 | 6 | 12 | 1 | 0 | 4 | 5 | 7 | 1 | 0 | 5 | 15 | 2 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 3 | 5 | 0 | 0 | 3 | 12 | 0 | 0 | 0 | 2 | 1 | 0 | 0 | 0 | 0 | 10 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 51 | 97 | 138 | 61 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 35 | 96 | 67 | 149 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 9 | 148 | 144 | 46 | ||||||||||||
| ND3 (size: 1042 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 16 (4.62%)
Alanine (Ala, A)
n = 22 (6.36%)
Serine (Ser, S)
n = 24 (6.94%)
Threonine (Thr, T)
n = 35 (10.12%)
Cysteine (Cys, C)
n = 1 (0.29%)
Valine (Val, V)
n = 5 (1.45%)
Leucine (Leu, L)
n = 65 (18.79%)
Isoleucine (Ile, I)
n = 37 (10.69%)
Methionine (Met, M)
n = 30 (8.67%)
Proline (Pro, P)
n = 19 (5.49%)
Phenylalanine (Phe, F)
n = 12 (3.47%)
Tyrosine (Tyr, Y)
n = 12 (3.47%)
Tryptophan (Trp, W)
n = 11 (3.18%)
Aspartic acid (Asp, D)
n = 3 (0.87%)
Glutamic acid (Glu, E)
n = 5 (1.45%)
Asparagine (Asn, N)
n = 20 (5.78%)
Glutamine (Gln, Q)
n = 10 (2.89%)
Histidine (His, H)
n = 5 (1.45%)
Lysine (Lys, K)
n = 12 (3.47%)
Arginine (Arg, R)
n = 3 (0.87%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 15 | 22 | 27 | 6 | 27 | 25 | 2 | 5 | 10 | 0 | 1 | 3 | 1 | 0 | 5 | 7 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 3 | 0 | 1 | 0 | 15 | 7 | 0 | 2 | 8 | 5 | 1 | 2 | 11 | 6 | 0 | 2 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 16 | 17 | 0 | 1 | 6 | 12 | 1 | 0 | 4 | 5 | 7 | 1 | 0 | 5 | 15 | 2 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 3 | 5 | 0 | 0 | 3 | 12 | 0 | 0 | 0 | 2 | 1 | 0 | 0 | 0 | 0 | 10 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 51 | 97 | 138 | 61 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 35 | 96 | 67 | 149 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 9 | 148 | 144 | 46 | ||||||||||||
| ND4 (size: 1378 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 17 (3.71%)
Alanine (Ala, A)
n = 30 (6.55%)
Serine (Ser, S)
n = 37 (8.08%)
Threonine (Thr, T)
n = 38 (8.3%)
Cysteine (Cys, C)
n = 3 (0.66%)
Valine (Val, V)
n = 16 (3.49%)
Leucine (Leu, L)
n = 100 (21.83%)
Isoleucine (Ile, I)
n = 44 (9.61%)
Methionine (Met, M)
n = 27 (5.9%)
Proline (Pro, P)
n = 23 (5.02%)
Phenylalanine (Phe, F)
n = 18 (3.93%)
Tyrosine (Tyr, Y)
n = 15 (3.28%)
Tryptophan (Trp, W)
n = 13 (2.84%)
Aspartic acid (Asp, D)
n = 3 (0.66%)
Glutamic acid (Glu, E)
n = 9 (1.97%)
Asparagine (Asn, N)
n = 23 (5.02%)
Glutamine (Gln, Q)
n = 9 (1.97%)
Histidine (His, H)
n = 12 (2.62%)
Lysine (Lys, K)
n = 11 (2.4%)
Arginine (Arg, R)
n = 11 (2.4%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 20 | 24 | 23 | 12 | 20 | 49 | 8 | 10 | 9 | 0 | 3 | 6 | 6 | 1 | 5 | 13 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 4 | 0 | 3 | 3 | 15 | 10 | 2 | 2 | 6 | 7 | 2 | 7 | 9 | 6 | 1 | 4 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 15 | 19 | 0 | 5 | 14 | 10 | 0 | 0 | 8 | 6 | 9 | 0 | 1 | 6 | 17 | 2 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 10 | 7 | 2 | 1 | 2 | 10 | 1 | 2 | 2 | 7 | 0 | 0 | 0 | 0 | 0 | 13 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 75 | 144 | 151 | 89 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 52 | 120 | 82 | 205 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 22 | 173 | 186 | 78 | ||||||||||||
| ND4L (size: 297 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 4 (4.08%)
Alanine (Ala, A)
n = 8 (8.16%)
Serine (Ser, S)
n = 8 (8.16%)
Threonine (Thr, T)
n = 5 (5.1%)
Cysteine (Cys, C)
n = 3 (3.06%)
Valine (Val, V)
n = 7 (7.14%)
Leucine (Leu, L)
n = 19 (19.39%)
Isoleucine (Ile, I)
n = 7 (7.14%)
Methionine (Met, M)
n = 13 (13.27%)
Proline (Pro, P)
n = 1 (1.02%)
Phenylalanine (Phe, F)
n = 7 (7.14%)
Tyrosine (Tyr, Y)
n = 3 (3.06%)
Tryptophan (Trp, W)
n = 0 (0%)
Aspartic acid (Asp, D)
n = 1 (1.02%)
Glutamic acid (Glu, E)
n = 2 (2.04%)
Asparagine (Asn, N)
n = 6 (6.12%)
Glutamine (Gln, Q)
n = 1 (1.02%)
Histidine (His, H)
n = 2 (2.04%)
Lysine (Lys, K)
n = 0 (0%)
Arginine (Arg, R)
n = 1 (1.02%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 1 | 6 | 11 | 2 | 3 | 8 | 1 | 4 | 1 | 0 | 1 | 4 | 2 | 0 | 3 | 4 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 2 | 1 | 2 | 1 | 6 | 1 | 0 | 0 | 3 | 1 | 0 | 0 | 0 | 1 | 0 | 1 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 2 | 2 | 0 | 2 | 3 | 3 | 0 | 0 | 0 | 2 | 1 | 0 | 1 | 0 | 6 | 1 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 1 | 1 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 1 | 0 | 0 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 22 | 19 | 31 | 27 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 8 | 22 | 16 | 53 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 5 | 42 | 37 | 15 | ||||||||||||
| ND5 (size: 1812 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 26 (4.31%)
Alanine (Ala, A)
n = 43 (7.13%)
Serine (Ser, S)
n = 46 (7.63%)
Threonine (Thr, T)
n = 57 (9.45%)
Cysteine (Cys, C)
n = 4 (0.66%)
Valine (Val, V)
n = 22 (3.65%)
Leucine (Leu, L)
n = 100 (16.58%)
Isoleucine (Ile, I)
n = 54 (8.96%)
Methionine (Met, M)
n = 33 (5.47%)
Proline (Pro, P)
n = 29 (4.81%)
Phenylalanine (Phe, F)
n = 48 (7.96%)
Tyrosine (Tyr, Y)
n = 13 (2.16%)
Tryptophan (Trp, W)
n = 12 (1.99%)
Aspartic acid (Asp, D)
n = 9 (1.49%)
Glutamic acid (Glu, E)
n = 12 (1.99%)
Asparagine (Asn, N)
n = 35 (5.8%)
Glutamine (Gln, Q)
n = 16 (2.65%)
Histidine (His, H)
n = 16 (2.65%)
Lysine (Lys, K)
n = 19 (3.15%)
Arginine (Arg, R)
n = 9 (1.49%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 18 | 36 | 30 | 12 | 22 | 52 | 1 | 13 | 16 | 0 | 7 | 7 | 8 | 0 | 17 | 31 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 3 | 2 | 2 | 3 | 21 | 19 | 0 | 2 | 11 | 13 | 0 | 3 | 15 | 11 | 0 | 12 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 21 | 22 | 2 | 3 | 15 | 17 | 2 | 3 | 6 | 1 | 12 | 1 | 0 | 5 | 30 | 6 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 10 | 11 | 1 | 0 | 9 | 17 | 2 | 1 | 3 | 5 | 0 | 0 | 0 | 1 | 0 | 11 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 112 | 157 | 207 | 128 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 60 | 166 | 121 | 257 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 12 | 251 | 246 | 95 | ||||||||||||
| ND6 (size: 525 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 34 (19.54%)
Alanine (Ala, A)
n = 9 (5.17%)
Serine (Ser, S)
n = 14 (8.05%)
Threonine (Thr, T)
n = 6 (3.45%)
Cysteine (Cys, C)
n = 1 (0.57%)
Valine (Val, V)
n = 20 (11.49%)
Leucine (Leu, L)
n = 23 (13.22%)
Isoleucine (Ile, I)
n = 8 (4.6%)
Methionine (Met, M)
n = 14 (8.05%)
Proline (Pro, P)
n = 3 (1.72%)
Phenylalanine (Phe, F)
n = 12 (6.9%)
Tyrosine (Tyr, Y)
n = 9 (5.17%)
Tryptophan (Trp, W)
n = 4 (2.3%)
Aspartic acid (Asp, D)
n = 3 (1.72%)
Glutamic acid (Glu, E)
n = 9 (5.17%)
Asparagine (Asn, N)
n = 1 (0.57%)
Glutamine (Gln, Q)
n = 0 (0%)
Histidine (His, H)
n = 0 (0%)
Lysine (Lys, K)
n = 2 (1.15%)
Arginine (Arg, R)
n = 2 (1.15%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 8 | 0 | 2 | 0 | 0 | 2 | 1 | 8 | 0 | 0 | 8 | 0 | 2 | 10 | 12 | 0 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 12 | 1 | 0 | 5 | 0 | 2 | 2 | 16 | 2 | 5 | 11 | 2 | 0 | 1 | 0 | 2 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 0 | 2 | 2 | 8 | 0 | 0 | 0 | 5 | 1 | 8 | 1 | 3 | 12 | 1 | 0 | 0 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 0 | 1 | 8 | 3 | 0 | 0 | 2 | 1 | 0 | 0 | 1 | 1 | 0 | 0 | 0 | 1 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 75 | 8 | 38 | 54 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 48 | 26 | 24 | 77 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 64 | 4 | 27 | 80 | ||||||||||||
| Total protein-coding genes (size: 11390 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 227 (5.98%)
Alanine (Ala, A)
n = 269 (7.09%)
Serine (Ser, S)
n = 275 (7.25%)
Threonine (Thr, T)
n = 294 (7.75%)
Cysteine (Cys, C)
n = 23 (0.61%)
Valine (Val, V)
n = 182 (4.8%)
Leucine (Leu, L)
n = 626 (16.5%)
Isoleucine (Ile, I)
n = 330 (8.7%)
Methionine (Met, M)
n = 224 (5.91%)
Proline (Pro, P)
n = 203 (5.35%)
Phenylalanine (Phe, F)
n = 242 (6.38%)
Tyrosine (Tyr, Y)
n = 127 (3.35%)
Tryptophan (Trp, W)
n = 105 (2.77%)
Aspartic acid (Asp, D)
n = 69 (1.82%)
Glutamic acid (Glu, E)
n = 94 (2.48%)
Asparagine (Asn, N)
n = 156 (4.11%)
Glutamine (Gln, Q)
n = 84 (2.21%)
Histidine (His, H)
n = 101 (2.66%)
Lysine (Lys, K)
n = 90 (2.37%)
Arginine (Arg, R)
n = 67 (1.77%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 132 | 198 | 181 | 77 | 145 | 271 | 30 | 84 | 82 | 2 | 37 | 61 | 72 | 12 | 87 | 155 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 43 | 6 | 17 | 36 | 127 | 99 | 7 | 42 | 87 | 76 | 22 | 43 | 77 | 81 | 2 | 40 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 120 | 126 | 8 | 39 | 88 | 96 | 4 | 10 | 38 | 44 | 83 | 12 | 19 | 39 | 117 | 25 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 76 | 67 | 27 | 18 | 51 | 85 | 5 | 6 | 17 | 40 | 4 | 1 | 0 | 3 | 2 | 93 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 841 | 978 | 1143 | 832 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 471 | 993 | 726 | 1604 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 199 | 1457 | 1457 | 681 | ||||||||||||
>NC_005358.1 Ochotona princeps mitochondrion, complete genome GTTCATGTAGCTTATACTATAAAGCAAGGCACTGAAAATGCCTAGATGAGTTACTAAACTCCATAAACAC AATAGGTTTGGTCCTGGCCTTTTTGTTAGTTCGTAGTTAGCTTACACATGCAAGTATCCCCGAACCGGTG AAAATGCCCTCTAACTCACCCATCGATTAAGAGGGGCGGGTATTAAGCACACACTAGTAGCTCAAAATAC CTTGCTTAACCACACCCCCAAGGGACACAGCAGTGATAAATCTTAAGCAATAAACGAAAGTTTGACTAAG TTAAACTACATCAGAGTTGGTAAACTTCGTGCCAGCCACCGCGGTCATACGAATAACCCAAATTAACAAA CCCCGGCGTAAAGCGTGTTTTAAGATTACAGTATAATAAAGTTAAATAATACCCAAGCTGTAGAAAGCTA TAGCTATAATTAAACCCTTCAACGAAAGTGACTTTATCACCCTTGAATACACGAAAGCTAGGATCCAAAC TGGGATTAGATACCCCACTATGCCTAGCCACAAACTTAAATAGTTAGACTAACAAAACTATTCGCCAGAG AACTACTAGCAACAGCTTAAAACTCAAAGGACTTGGCGGTGCTTTATACCCCCTAGAGGAGCCTGTTCTA TAATCGATAAACCCCGCTCCACCTCACCACCCTTTGCCAACTCAGCCTGTATACCGCCATCTTCAGCAAA CCCTAAAAAGGTATCATAGTAAGCCTAATAACCCTCGTAAAAACGTTAGGTCAAGGTGTAGCCCATAGGG TGGGAAGCAATGGGCTACATTTTCTTATTTAAGAATACATACGAAAGCCCATGTGAAAACCATAGGCCGA AGGCGGATTTAGCAGTAAGTTAAGAATAGAGAGCTTAATTGAACTCGGCAATGAAGCACGCACACACCGC CCGTCACCCTCCTCAATTACCTGAAAATCCTATGCCCTTAAATAAATATATCATACCAACAAGTACTAGA GGAGACAAGTCGTAACAAGGTAAGTATACTGGAAAGTGTGCTTGGAAAACCCAAAGCGTAGCTTAACCAA AGCATCTGACTTACACTCAGAAGATTTCACATTGTCGTGACCACTTTGAGCCACTTCTAGCCCAACCACC CACCCGAATAACTAAATACATACCTAAAACAAAACATTTACCACGCTTAAAGTATAGGAGATAGAAATAT GTCTTAGGAGCTATAGAGATAGTACCGTAAGGGAAAGATGAAAGATCAGTTAACAGCACTAAAAAGCAAA GATTCACCCTTGTACCTTTTGCATAATGAATTAGCTAGAAACCATTTGGCAAAAAGAATTTTAGTCAAAG ACCCCGAAACTAGACGAGCTATCTGTGAGCAGTTTTAAGAACGAACCCGTCTATGTAGCAAAATAGTGGG ACGACTTACAGATAGTGGTGAAAAGCCAAACGAGCCTAGTGATAGCTGGTTGTCCAGGTTAGAATTTTAG TTCAACTTTATGTTTACCAACAAGAAACTACAATCAAAATGTAAGCATAAAACTTAATCTAAGGGGGGAC AGCCCCTTAGAATCAGGATACAGCCTGAATTGGAGAGTAAGTTTAATCTATTACCATAGTTGGCCTAAAA GCAGCCACCAATTAAGAAAGCGTTAAAGCTCAACACTAACCAAAAAACTAAATTCCATATAAGATCATCA ACTCCCAAAAACACACTGGACCAATCTATACACCTATAGAAGAGATACTGCTAATATGAGTAACAAGAAC CCACCTTCTCCCCAGCACAAGCCTATATCAGATCGCATATACTCTGATAGTTAACATCTATACGTAAACA CCCCACACCTAAAAACCTACGTAACTTTAACTGTTGACCCGACACAGGAGTGCATCTAAGGAAAGATTAA AAGGAGTGGAAGGAACTCGGCAAACCCAAGCCCCGCCTGTTTACCAAAAACATCACCTCTAGCATCGCAA GTATTAGAGGCACTGCCTGCCCAGTGACGCAAGTTCAACGGCCGCGGTATCCTGACCGTGCAAAGGTAGC ATAATCACTTGTTCCTTAATTAGGGACTTGTATGAACGGCAACACGAGGGCTTAACTGTCTCCCACCCCA GATCAGTGAAATTGACCTCCCCGTGAAGAGGCGGGGATACAACAATAAGACGAGAAGACCCTATGGAGCT TTAATTAACTGGCTTACACAAATAAACTACCCCTCCACGCGAACACAACAAATTATGTCTCTGAGCCAGA AATTTTGGTTGGGGTGACCTCGGAGTATAAATCAACCTCCGAATGGATACAGCCATGACTAACCAGTCTA AGCAACTAAACCATCAATTGACCCAATTTATTGATCAATGGAACAAGTTACCCTAGGGATAACAGCGCAA TCCTATTCTAGAGTCCATATCGACAATAGGGTTTACGACCTCGATGTTGGATCAGGACACCCAAATGGTG CAACCGCTATTAAAGGTTCGTTTGTTCAACGATTAAAGTCCTACGTGATCTGAGTTCAGACCGGAGTAAT CCAGGTCGGTTTCTATCTATTCACCCACTTCTCCCAGTACGAAAGGACAAGAGAAGTAGAGCCCACTGCA CCCCAGCGCTCTAAGCCTAATAGATGAAATAATCTTAATCTAGTAAACTAACCCCACCCTGCCCAAGACC AGGGTTTGTTAAGATGGCAGAGCCCGGTAAATGCATAAAACTTAAAACTTTATATTCAGAGGTTCAACTC CTCTTCTTAACATCATGTTCCTAGCCAACATCATCCTCTTAATCCTCCCCGTACTACTAGCCATAGCATT CCTCACCCTAGTCGAACGAAAAATCTTAGGTTACATACAACTCCGCAAAGGCCCTAACGTAGTAGGCCCA TACGGACTCCTCCAACCCTTTGCTGACGCAGTAAAACTCTTTGTCAAAGAGCCCCTCCGCCCCTTAACAT CCTCCCCATTCTTATTCATTATTGCCCCTACACTAGCCTTAACCCTGGCCCTGACAATATGAATTCCTAT CCCCATACCATACCCCCTCATTAATATAAACATAGGCATTCTCTTCATCCTAGCAACCTCCAGCCTAGCA GTATACTCCATTCTATGATCAGGATGAGCTTCAAATTCCAAATACGCACTTATCGGAGCACTTCGAGCCG TCGCACAAACAATCTCCTACGAAGTCACGTTAGCTATTATCCTTCTATCCATCCTCCTCATAAACGGATC TTTCGCCCTATCATCCCTAATTGACACCCAAGAATACATATGAATCCTCATTCCAGCATGGCCCCTAGCC ATAATATGATTTATCTCAACTCTAGCAGAAACGAACCGAGCCCCATTCGACCTTACTGAGGGAGAATCCG AACTAGTATCAGGCTTCAACGTAGAATACGCCGCAGGCCCCTTCGCCCTATTCTTCCTAGCTGAATACAC CAACATCATCATAATAAACGCTCTTACCGTCACCCTATTCTTAGGAGCATTCCATGACACCCACAACCCC CAACTCTTTACAATTAACTTTGCCATTAAAACCCTGCTACTAACAATAGTATTCCTATGAATCCGGGCAT CATACCCACGATTCCGATACGACCAACTCATACACCTCCTATGAAAAAACTTCCTACCCCTAACCCTAGC CCTATGTATGTGACACGTATCCATACCCGTATTCCTAGCAGGTATCCCTCCATATGCATAGAAATATGTC TGACAAAAGAGTTACTTTGATAGAGTAAATAATAGGGGTTTAAATCCCCTTATTTCTAGAGCTCTGGGTC TCGAACCCACCCCTGAGAACTCAAAATTCTCCGTGCTACCCACTACACCACACTCTAAGTAAGGTCAGCT AAATTAAGCTATCGGGCCCATACCCCGAAAATGTTGGTTTATACCCTTCCCGTACTAATTAACCCCCTAG TCCTAACCATAATCATCCTCACACTCGCATCAGGCACTGCCATTGCCACATTCAGCTCACACTGACTCCT AATCTGAATTGGCCTAGAAATAAATATACTCTCCATTATTCCCATATTAACCTACAAAAGCAACCCACGG TCCACAGAAGCCGCAACAAAATATTTCCTTACACAAGCCACAGCCTCAATAATCTTAATAATAGGAATCA TTCTAAACCTCATATACTCAGGTCACTGAACCATCCTCAACTCCAACAACCAAATCCCACCCCTACTAAT AATAACAGCACTAACCATAAAACTAGGAATAGCCCCCTTCCATTTCTGAGTCCCAGAAGTCACCCAAGGC GTAGACCTAAAATCGGCCCTCCTCCTTCTAACATGACAAAAAATCGCCCCCCTTTGCATTCTCTACCAAA TTCACAACTCCCTCAACACCACACTATTAACCCTCATAGGCCTCCTCTCCATCATGATCGGCGGGTGGGG AGGCCTGAACCAAACTCAACTTCGAAAAATCCTGGCATACTCATCAATCGCCCATATAGGTTGAATAGGA ATTATTCTAACATATAACCCAGACATCATACTCCTCAACCTTATCGTTTACATCATCCTAACAATCCCCA TATTTATAATACTCATTATTAATTCTAGCACAACAGCACTCTCACTAGCCCAAACATGAAATAAAACCCC CTTAATAACCGCAGCCATACTAACCATCCTAATATCACTTGGAGGCCTCCCTCCACTCACCGGCTTTATG CCTAAATGAGCCATTATCAACGAACTCACCAAAAACGACAGCATCATTCTCCCAACCCTAATAGCCATAC TAGCACTCCTAAACCTCTACTTCTATATACGACTAATCTATTCAACCTCACTAACAATGTTTCCCACAAC AAATAATATAAAAATAAAATGACAATTTGAATTCAAAAACCAAGCCTACTTCCTATCACCCCTAATTATC TTATCAACCCTCTCCCTCCCCCTCCTCCCCCTATTTACCGCCTGATATTAGAAGTTTAGGTTAAACCAGA CCAAGAGCCTTCAAAGCTCTAAGCAAGTAGCACATACTTAACTTCTGCTTAAGGACTGCAAGAACTACCT CACATCTCCTGGATGCAAACCAGACACTTTTACTTAAGCTAAGTCCCCCTAGACTGGTGGGATCCAACCC CACGAAAATTTAGTTAACAGCTAAATACCCTAATCAACTGGCTTCAATCTACTTCTCCCGCCGCAAAAAA AAAAGGCGGGAGAAGCCCCGGCAGATTTGAAGCTGCTCCTTTGAATTTGCAATTCAACATGATACATCAC CTCAGGGCTTGGTAAGAAAGGGACTCAAACCCCCGTAATTAGATTTACAGCCTAATGCCTACTCGGCCAC CTTACCTTACTTATGTTCATCAACCGTTGATTGTTCTCCACAAATCACAAAGACATCGGCACCCTATACA TACTATTCGGCGCTTGGGCTGGAATAGTGGGTACCGCACTCAGCCTTCTCATCCGAGCCGAACTTGGACA ACCAGGAGCCCTACTAGGAGATGACCAAATTTACAACGTAATCGTCACAGCCCACGCTTTTGTCATAATT TTCTTCATAGTAATACCAATTATAATCGGAGGTTTCGGTAATTGATTAGTACCACTAATAATTGGTGCGC CCGATATAGCTTTCCCCCGAATAAATAATATAAGCTTCTGACTTCTACCACCCTCCTTTCTACTCCTATT AGCATCCTCAATAGTCGAAGCAGGGGTAGGAACCGGTTGAACAGTCTACCCCCCTCTAGCCGGCAACTTA GCCCACGCAGGAGCATCCGTAGATCTAGCAATCTTCTCCCTTCATCTAGCCGGTATCTCCTCAATTCTTG GCGCTATCAATTTCATCACAACAATTATTAATATAAAACCCCCAGCCATATCCCAATACCAAACCCCCTT ATTTGTCTGATCTGTCCTAATTACAGCGGTCCTACTGCTACTCTCTCTACCAGTCCTAGCAGCAGGAATC ACAATGCTTTTAACAGACCGAAACCTAAACACAACTTTCTTCGACCCAGCAGGAGGCGGAGACCCTATTC TGTATCAGCACTTATTCTGATTCTTTGGCCACCCCGAAGTTTACATTTTAATTCTACCGGGATTCGGTGT AATCTCCCATATCGTCACTTACTACTCCGGCAAAAAAGAACCTTTCGGCTACATAGGAATAGTTTGAGCC ATAATATCCATTGGTTTCCTAGGGTTTATTGTCTGAGCCCACCATATATTTACAGTAGGCATGGACGTAG ACACCCGCGCATATTTCACATCAGCCACAATAATTATTGCCATTCCCACAGGAGTTAAAGTCTTCAGCTG ACTAGCTACGCTTCACGGAGGCAATATCAAATGATCTCCAGCCATACTTTGAGCCTTAGGCTTCATCTTC CTCTTCACAATCGGAGGGCTAACAGGCATTGTCCTAGCCAATTCATCACTAGACATTGTCCTACACGATA CCTATTACGTAGTAGCCCATTTCCACTATGTTCTATCAATAGGGGCTGTATTTGCCATCATGGGCGGATT TGCACATTGATTCCCTTTATTCTCAGGCTATACCCTTGACCCAGTATGAGCAAAAATTCACTTCGCCGTA ATATTCGTCGGAGTTAATCTTACATTCTTCCCTCAACACTTCCTAGGCCTATCCGGCATGCCTCGACGCT ACTCCGATTACCCCGATGCCTACACCTCATGAAACATAGTATCCTCAATAGGCTCTTTCATTTCGCTTAC AGCTGTTATAATTATAATTTTCATGATTTGAGAGGCATTCGCCTCCAAACGAGAAGTCTCAACCGTTGAA CTAACAACCACCAACCTAGAGTGACTTCACGGCTGCCCTCCTCCCTACCACACATTTGAAGAACCTGCCT ATGTAAAAGCCTAGAACAAGAAAGGAAGGAATCGAACCCCCATTAATTGGTTTCAAGCCAACCACATAAC CCTTATGACTTTCTTCATGAGATATTAGTAAAACCATTACATAATCTTGTCAAGATTAAATCACGAGCCA AACGCCCGTATATCTCTATGGCATACCCATCCCAAATAGGCTTTCAAGACGCCTCTTCCCCAATCATAGA GGAACTTATACACTTTCACGACCACACACTTATAATCGTTTTCTTAATTAGCACCCTAGTCCTGTATATC ATTGCACTTATACTCTCTACCAAACTTACACACACCAGTACAATAGACGCCCAAGAAGTAGAAACAATTT GAACAATCCTACCCGCCATTATTTTAATCCTAATTGCTCTCCCTTCCCTACGCATCTTATATATAATGGA CGAAATCAACAACCCATCCCTAACAGTTAAAACCATAGGACATCAATGATACTGAAGCTACGAGTATACT GATTATGAAGACCTAAGCTTTGACTCCTATATAATCCCAACATCCGATCTAAAACCAGGAGAATTGCGAT TGCTTGAAGTAGACAACCGAGTAGTACTTCCAATAGAAATACCTGTACGTATACTCATCTCATCAGAAGA CGTTCTACACTCATGAGCTGTACCATCACTAGGCCTAAAAACAGATGCCATCCCAGGACGACTAAATCAA GCAACACTGATATCCACTCGCCCTGGTCTATTCTACGGCCAATGCTCAGAAATCTGTGGATCAAACCACA GTTTTATGCCAATCGTTCTTGAACTCGTACCACTAAAACACTTTGAGGCCTGATCATCATCAATGCTATA AGAACATTATGAAGCTAACAAGCATTAACCTTTTAAGTTAAAGACTGAGAGCCCTAATCTCTCCATAATG AAATGCCACAACTAGACACTTCCACATGATTTATTACCATCCTATCTATACTAGTCTCACTATTCTCCCT GATCCAACTTAAATTCCACAAATACACCTTCCCCGCTAATCCTTCACCCGCAAGCTTAAAATCAACTAAA CAAATCACACCCTGAGAGTCCAAATGAACGAAAATTTATTCTCCTCTTTCATTACCCCCTCAATTATAGG TTTACCCATCGTAATCCTCATTATTATATTTCCAATTATCCTATTCCCCACCCCTACACGCCTTATTAAC AACCGACTCATTGCAATCCAACAATGACTAGTCCAACTCATTCTAAAACAAATAATACTAATCCATAACC CAAAAGGCCGAACCTGGTCACTAATATTAATCTCCCTGATCATATTCATCGGCTCAACCAACCTCCTAGG CCTCCTCCCACACTCCTTCACCCCAACCACACAATTATCTATAAACCTTGGTATAGCAATCCCTCTTTGA GCCGGGGCAGTCATCACAGGCTTCCGCTACAAAACCAAAGCTTCATTAGCACACTTTCTCCCCCAAGGAA CTCCCCTCCCACTTATTCCTATACTCGTAATCATCGAGACAATTAGCCTGTTTATCCAACCCATAGCCCT CGCCGTACGACTTACCGCTAATATCACTGCAGGGCACCTCCTGATACACTTAATCGGTGGCGCCACACTA GCCCTGACCTCCATCAGCCCTGCAACCGCCACAATCACATTCATCATCCTCCTATTACTAACCGGCTTAG AATTTGCCGTCGCATTAATTCAAGCTTATGTCTTTACACTTCTAGTAAGCCTCTACTTACATGATAATAC TTAATGACCCACCAAACCCATGCATACCATATAGTAAACCCCAGCCCATGGCCACTTACAGGAGCCCTAT CCGCCCTCCTGATAACATCAGGCCTAGTAATATGGTTCCACTTCCACTCCTCCCTCCTCCTCTCCATTGG ACTCCTAACTAACACCCTTACCATATACCAATGATGACGGGACATCGTACGAGAAGGTACTTTTCAAGGA CATCACACCCCAATTGTACAAAAAGGCCTTCGCTATGGTATAGTCTTGTTCATTATCTCAGAAGTCTTCT TTTTCGCGGGCTTTTTCTGAGCATTTTACCACTCAAGCCTAGCACCTACACCAGAATTAGGCGGCTGCTG GCCCCCTGTAGGCATCACCCCCTTAAACCCACTAGAAGTCCCACTCCTAAATACTTCCGTACTACTAGCC TCAGGCGTATCCATCACCTGAGCACACCACAGCCTTATAGAAGGAAACCGAAAAAATATACAACAAGCCC TACTAATTACTATCTTATTAGGAGCCTATTTCACCTTACTCCAAGCCTCTGAATACTATGAGACAACATT TACAATCTCAGACGGGGTTTACGGCTCAACATTCTTTATGGCAACTGGATTTCACGGCCTCCATGTTATT ATTGGCTCTACCTTCCTAACCGTCTGCTTGCTCCGACAATTTAATTTTCACTTCACATCTAACCACCACT TCGGATTTGAAGCCGCCGCATGATACTGACATTTCGTTGATGTAGTCTGACTATTCCTATACGTCTCTAT TTACTGATGAGGATCTTACTTCCTTAGTATAGTCCAGTACAACTGACTTCCAATCAGTCAGCTCTGGTCG CAATCCAGAATGAAGTAATTAACCTAATCCTAGCTTTATTTATTAACACCCTAATCCCCATAATTCTTAT CACCATTGCATTCTGACTACCACAAACCTATGCTTACTCAGAAAAAGCAAGCCCTTACGAGTGCGGTTTT GATCCAATAGGATCCGCCCGCCTACCCTTCTCACTAAAATTCTTCCTTGTAGCCATCACATTTTTACTCT TCGACCTAGAAATTGCCCTACTCCTCCCTCTCCCCTGAGCCGCTCAGACTAGCAATCTGTCATTAATACT TACCATCGCACTACTCCTCATTTCAGTACTAGCAATAGGCCTAGCATATGAATGAATACAAAAAGGCCTA GAGTGAGTTGAATATGATAATTAGTTTAGACAAAATAAATGATTTCGACTCATTAGACTATGGATTACCC ATAATTATCAACATGTCTATCACCACCCTAAACATCATAGTAGCCTTTATAATAGCCCTTCTAGGCATAT TCGTCTACCGATCTCATCTCATATCATCACTTTTATGTCTAGAAGGCATGATATTATCCCTATTTATACT AGCCACAATCGTCTCACTCAACATAAACTTTACTATCTCCTTCATATTCCCAGTAATCTTGCTAGTCTTC GCAGCCTGCGAGGCTGCCGTTGGATTAGCCTTACTAATTATAGTCTCCAACACATATGGCATAGACTATA TCCACAACCTAAACCTCCTGCAATGCTAAAACTAATTATCCCCACAATTATATTATTACCTCTAACCTGA TGATCAAATAACAAAATACTATGAATTAACACAACAACCCACAGCCTCCTAATTAGCCTAGTAGCACTTC TCCTGATGTATCAACCTAATGTCCACAACCTAAACTTCTCCCTCATATTCTCATCCGACCCATTATCTAC ACCACTCCTAATCTTAACATTTTGACTACTACCCTTAATACTAATTGCCAGCCAAAACCACCTCTCCAAA GAGAACCCGCCACGAAAAAAACTTTTCATTTCAATACTAGTCCTATTACAAATTTTTCTGGTCATAACAT TCTCAGCCACTGAACTAATCCTATTCTACATCCTATTTGAAGCTACTCTGATCCCTACACTTGTTATCAT TACCCGATGAGGCAACCAAGCAGAACGACTAAACGCAGGAACCTACTTCTTATTTTACACCCTGATAGGA TCACTCCCCCTTCTAGTAGCCCTACTCTACATCCACAACACCTCCGGAACCCTTAATTTCCTAGTTATCC AAATTTTAGCCCGCCCTCTCACCGATTCCTGATCCAACTCCCTTTTATGACTAGCCTGCATAATAGCGTT CCTAGTAAAAATACCTCTATACGGTTTACACCTCTGACTTCCTAAAGCCCATGTAGAAGCCCCCATTGCA GGCTCCATAGTTCTAGCAGCAGTCCTATTGAAACTAGGTGGGTATGGCATAATACGTCTAACACTAATTC TAAACCCCGTAACAGAGTATATGGCCTACCCCTTCCTTCTACTTTCCCTATGAGGAATAATTATAACAAG CTCTATCTGCCTACGACAAACAGACCTAAAATCCCTAATCGCCTACTCATCAGTCAGCCACATAGCACTC GTAATTGTCGCGATCCTAATCCAAACCCCATGAAGCTTTATAGGAGCCACAGCTCTGATAATTGCCCATG GCCTCACCTCCTCCATACTATTCTGCCTGGCCAATACTAACTACGAACGTATCCACAGCCGAACAATAAT CCTAGCCCGAGGGCTGCAAACAATCCTCCCCCTCATAGCCGCATGATGACTCCTAGCTAGCCTAACCAAC CTAGCACTACCCCCCTCCATCAACCTGATCGGAGAACTATTCGTGATTATCTCATCATTCTCTTGATCTA ACCTTACAATTATCCTAGCAGGAATTAATATGCTAATCACCGCCCTCTACACCCTCTATATACTATCCAC AACACAACGAGGCAAGCTAACTTATCACATCAACAATATAACCCCATCTTTCACACGCGAACACACCCTC ATTCTCCTCCACCTACTCCCACTAATTCTTCTTTCAATCAACCCTAAAATCATCCTAGGCATTACATATT GTAGACATAGTTTAAACAAAACACTAGATTGTGAATCTAGTAATAGAGACTAACAATCTCTTATCTACCG AGGAAGTATGCAAGAACTGCTAACTCCTGCTACCATATATAATAATATGGCTTCCCCAGCTTTTAAAGGA TAGCAGTTATCCGTTGGTCTTAGGAACCAAAAAATTGGTGCAACTCCAAATAAAAGCAATTAACCTATTT TCTACCCTATCCGCCCTAACAATACTCATTCTCACCCTACCTATCTTTATATCCCTTACCAATTTTTATC TCCACCCCACTTTCCCCACCTACGTAAAAAACTCAGTCTCACTCGCCTTTATAATTAGTCTAGTTCCCAC AGTTATATTCCTTTACACCAACCAAGAAATAGTATTATCAAACTGACACTGAACAACCATCCACACTATT AAATTTTCCATCAACCTAAAACTAGACTTCTTCTCAATACTATTCATCCCAGTCGCACTATTTGTTACAT GGTCTATTATAGAATTCTCCTTATGATACATACACTCAGACCCCAACATCAACCGCTTCTTTAAGTACCT TCTCCTATTCTTAATCACTATAATGATCCTAGTCACAGCTAACAACCTATTCCAACTATTCATCGGCTGA GAAGGAGTAGGTATCATATCATTCCTTTTAATTGGCTGATGACACGGACGAGCAGACGCAAACACCGCAG CCCTACAAGCAATCCTATACAACCGAATCGGAGACATCGGCTTTGTTCTATCCATAGCATGATTCTTTAT TCACATAAACTCATGAGAACTCCAACAAATTTTTATACTAGAACAAAACAACCTCACCCTCCCTCTCATA GGTCTAATTCTAGCAGCCGCAGGAAAATCAGCACAATTTGGCCTTCATCCATGACTACCAGCAGCAATAG AAGGCCCAACCCCCGTATCAGCCCTACTTCACTCCAGCACTATAGTTGTCGCCGGAGTCTTCTTACTAAT CCGATTCTACCCAATTCTAGAGTCCAACAAACTAGCCCAATCCCTAGTTCTATGTTTAGGAGCCCTAACA ACTCTATTTACAGCCCTATGTGCCCTAACCCAAAACGACATTAAAAAGATCATCGCATTCTCCACTTCAA GTCAACTAGGCCTCATAATAGTAACGATTGGAATCAACCAACCACACCTCGCCTTCCTCCATATCTGCAC CCACGCTTTCTTCAAAGCCATGTTATTTATATGCTCCGGATCAATTATCCACAGCCTCAACGACGAACAA GACATCCGAAAAATAGGAGGCCTCTTCAATACCCTACCATTCACATCCTCAGCACTGACTATCGGCAGCC TAGCACTAACAGGCATGCCCTTTTTAACAGGATTTTACTCGAAAGACCTTATCATCGAAGCAGTTAACAC ATCACATACAAACGCCTGAGCCCTACTACTAACTCTCATTGCCACCTCCATAACAGCCATCTACAGCACC CGAGTAATCTTCTTCACCCTTCTCAATCAACCCCGTTTCCCACCCATAGTCACAATTAATGAAAACAACC CCTACTTAACCAACTCGATTAAACGCCTCGCCCTAGGAAGTATCTTCGCAGGCTTTCTCATCTCAAACAA CATCCCACCCTTTACTGTACCCCCCATAACCATACCTCTCTACACAAAAATAGCAGCCCTAATAGTCACC GTACTAGGCTTCTTACTAGCCATAGAACTAAACCAACTAACACTTAACCTAAAACTAAACCCCCATTCTA AACCATTCTACTTCTCCAACCTCCTAGGATTCTTCCCCACAACTATACATCGCCTAATCCCCCATGCTAG CCTATTATTCAGCCTTAACACTGCAACCACTACCCTAGACATAACATGAACCGAAAAAGCAATCCCAAAA ACAATCGCCACGATCCAAATAAATTTATCATCCCTAATCTCAACACAAAAAGGACTTATTAAACTCTACT CCTTAACATTCCTTATCTCAATTACACTAGCCATCCTCATCCTAATCTAAAACCACGAGTAATCTCAATC ACAACAAAAATACTAACAAACAACATTCAACCCGCCAATAACATCAACCACCCCCCACTGCCATATAAAG CAGCCACACCTATAGAATCTTCCCGAACATAACCACCCTCCTCACCTCCAAACATACCCATACTCTCAGA ACCCTTCAACCCAAACCCCCAATCAATAACCCCATCCCCCATAAATAGACCCACTAAAGCCAACTCCATA ACCAAACCTGCAACCAACGTTCCCAGAACCACCACATTAGATCCCCAAGACTCAGGATACTCCTCCGTAG CCATAGCAGTTGTATAACCAAATACTACCAACATACCCCCCAAATACACTAAAAACATCATTAATCCTAA AAAAGATGCACCATAACTTAAAATAATCCCACAACCCACACCCCCACTCACAATTAGTCCCAAGCCCCCA TAAATAGGAGATGGCTTAGAAGAAAACCCCACAAAACCCGCAACAAATATCATGCTTAACAACAACACAT AGTATGTCATAATTCTTACATGGATTCTAACCATGACTAATGATATGAAAAACCACCGTTGTAGTTCAAC TACAAGAACCTAATGACCAACATACGAAAAAACCACCCTCTAATAAAAATCGTAAACCACTCTTTTATCG ACCTGCCAACCCCCTCAAACATCTCCGCATGATGAAACTTCGGATCCCTCCTAGGCCTATGCCTAGGCAT CCAAATCATCACCGGCCTATTCCTGGCCATACACTACACATCAGACACACTAACAGCATTCTCATCAGTC ACCCACATCTGCCGAGATGTAAACTACGGTTGAATTATCCGCTACCTACACGCCAACGGCGCATCCATAT TCTTCATCTGCCTCTTCTTACACGTAGGCCGAGGCATCTATTACGGCTCCTACACCTACTCAGAGACATG AAACATCGGAATCCTACTACTATTTGCAGTTATAGCAACCGCCTTCATAGGCTACGTCCTACCATGAGGA CAAATATCTTTCTGAGGAGCAACCGTAATCACCAATCTTCTATCTGCAATCCCATACATCGGCACCGACC TCGTCCAATGAATCTGAGGGGGCTTTTCAGTAGATAAAGCCACCCTAACTCGATTCTTTGCCTTTCACTT CATCCTACCTTTTATCATTGCAGCCTTAGTCATAGTCCACTTACTCTTCCTCCACGAAACAGGCTCAAAT AACCCAACAGGCATTATCTCAGACGCAGACAAAATCCCATTCCACCCCTACTACACAGTCAAAGACGCCC TCGGTTTCCTACTCCTGACCACCCTTCTACTCACCCTAGTACTATTTTCCCCAGACCTCCTAGGAGACCC AGACAACTATACTCCCGCCAACCCACTCAACACACCACCACACATCAAACCAGAGTGGTACTTCCTATTC GCCTACGCTATCCTTCGCTCTATCCCAAACAAACTTGGAGGCGTCCTAGCCCTCGTCCTATCAATTGCCA TCCTCGCAATCATGCCACTTCTCCACACATCAAAACAACGAAGCATGATATTCCGACCAATCAGCCAAAC CCTCTTCTGAATCCTCGTAGCTGACCTACTCACACTCACATGAATCGGAGGACAACCCGTTGAACACCCA TTCATCATCATCGGTCAACTAGCATCATTCCTCTATTTCCTTTTAATCCTAGTCCTCATACCAGCCTGCA GCCTAATCGAGAACAAACTACTCAAATGAAGGTCCTCGTAGTATAACAATTACCCTGGTCTTGTAAACCA AAAATGAAGTGCAACCCTTCCTAGGACATCAAAGAGGAGACCTAAGTCCCACCATCAGCACCCAAAGCTG AAATTCTTATTAAACTACTCTCTGCAACTCATTCCTACACTCCCTCTCCCACACATTATCCGCTATGTAC CTCGTGCATTAATGCACCTCCCCATTAATAATGGTACAGTACATATATTCCATAACAGTACATAGTACAT TTATGTTTAATCGTACATTAATCTATTGTCCCCATGCATATCTAGTAAGACATAAAACGCTAATCGTACA TAAGACATTCCCTACTTAATCAACTAACTATTCCTAACAATACGAATATTCATGATTACTTGATCTTCAT AATCGTACATAGGACATGAACTCCATAATCGTACATAGACCATAACACCCAACTGACATCACAACCCCCT CAACATGACTATCCCCTTCCCCCAGGAGTCCCTTAATCTACCATCCTCCGTGAAACCAGCAACCCGCCCA ATACGGATCCCTCTTCTTGCTCTGCGCCCATGACCCTTGGGGGTCGCTAAACTGAAACTTTAACTGGCAT CTGGTTCTTACTTCAGGGCCATAACCCTTAGAATCGCCCACACGTTCCCCTTAAATAAGACATCTCGATG GACTAATGACTAATCAGCCCATGCTCACACATAACTGTGGTGTCAGGCATTTGGTATCTTTATTTTTTCG GGGTATGCTTGGACTCACCATGGCCGCGGTGGGCCATAAATCAGACCTAAAATAGTAGACGAGCACCTCG ATGTACCTCCTCCGCCCTCATAATTATGAGCCGGGACATACGTTCCATGTATTCTAGGACATAACAGGTC ACGTACAAGAGACTGTGATCCAAACACGCCTATTCAGCGAGTATATGAACTTAATGCTTGTAAGACATAA TGTTAAATACGTGTACGTGTACGTGTACGTGTACGTGTACGTGTACGTGTACGTGTACGTGTACGTGTAC GTGTACGTGTACGTGTACGTGTACGTGTACGTGTACGTGTACGTGTACGTGTACGTGTACGTGTACGTGT ACGTGTACGTGTACGTGTACGTGTACGTGTACGTGTACGTGTACGTGTACGTGTACGTGTACGTGTACGT GTACGTGTACGTGTACGTGTACGTGTACGTG
Contact: Vadim E. Fraifeld, MD, PhD
Head: Lab for the Biology of Aging, The Shraga Segal Department of Microbiology, Immunology and Genetics, Faculty of Health Sciences, Ben-Gurion University of the Negev
P.O. Box 653, Beer-Sheva 8410501, Israel
Email:
Head: Lab for the Biology of Aging, The Shraga Segal Department of Microbiology, Immunology and Genetics, Faculty of Health Sciences, Ben-Gurion University of the Negev
P.O. Box 653, Beer-Sheva 8410501, Israel
Email:
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If you would like to cite this database please use:
Toren D, Barzilay T, Tacutu R, Lehmann G, Muradian KK, Fraifeld VE. MitoAge: a database for comparative analysis of mitochondrial DNA, with a special focus on animal longevity. Nucleic Acids Res. 2016; 44(D1):D1262-5.
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