Viewing data for Ophiophagus hannah


Scientific name Ophiophagus hannah
Common name King cobra
Maximum lifespan 22.50 years (Ophiophagus hannah@AnAge)

Total mtDNA (size: 17267 bases) GC AT G C A T
Base content (bases) 7168 10099 5005 2163 4300 5799
Base content per 1 kb (bases) 415 585 290 125 249 336
Base content (%) 41.5% 58.5%
Total protein-coding genes (size: 11262 bases) GC AT G C A T
Base content (bases) 4634 6628 3397 1237 2778 3850
Base content per 1 kb (bases) 411 589 302 110 247 342
Base content (%) 41.1% 58.9%
D-loop: No data available for this section.
Total tRNA-coding genes (size: 1502 bases) GC AT G C A T
Base content (bases) 663 839 408 255 358 481
Base content per 1 kb (bases) 441 559 272 170 238 320
Base content (%) 44.1% 55.9%
Total rRNA-coding genes (size: 2413 bases) GC AT G C A T
Base content (bases) 1042 1371 632 410 478 893
Base content per 1 kb (bases) 432 568 262 170 198 370
Base content (%) 43.2% 56.8%
12S rRNA gene (size: 934 bases) GC AT G C A T
Base content (bases) 409 525 242 167 189 336
Base content per 1 kb (bases) 438 562 259 179 202 360
Base content (%) 43.8% 56.2%
16S rRNA gene (size: 1479 bases) GC AT G C A T
Base content (bases) 633 846 390 243 289 557
Base content per 1 kb (bases) 428 572 264 164 195 377
Base content (%) 42.8% 57.2%

ATP6 (size: 681 bases) GC AT G C A T
Base content (bases) 259 422 196 63 182 240
Base content per 1 kb (bases) 380 620 288 93 267 352
Base content (%) 38.0% 62.0%
ATP8 (size: 165 bases) GC AT G C A T
Base content (bases) 61 104 49 12 37 67
Base content per 1 kb (bases) 370 630 297 73 224 406
Base content (%) 37.0% 63.0%
COX1 (size: 1602 bases) GC AT G C A T
Base content (bases) 694 908 451 243 437 471
Base content per 1 kb (bases) 433 567 282 152 273 294
Base content (%) 43.3% 56.7%
COX2 (size: 685 bases) GC AT G C A T
Base content (bases) 301 384 191 110 145 239
Base content per 1 kb (bases) 439 561 279 161 212 349
Base content (%) 43.9% 56.1%
COX3 (size: 784 bases) GC AT G C A T
Base content (bases) 352 432 237 115 193 239
Base content per 1 kb (bases) 449 551 302 147 246 305
Base content (%) 44.9% 55.1%
CYTB (size: 1117 bases) GC AT G C A T
Base content (bases) 468 649 351 117 299 350
Base content per 1 kb (bases) 419 581 314 105 268 313
Base content (%) 41.9% 58.1%
ND1 (size: 964 bases) GC AT G C A T
Base content (bases) 414 550 311 103 239 311
Base content per 1 kb (bases) 429 571 323 107 248 323
Base content (%) 42.9% 57.1%
ND2 (size: 1030 bases) GC AT G C A T
Base content (bases) 412 618 319 93 229 389
Base content per 1 kb (bases) 400 600 310 90 222 378
Base content (%) 40.0% 60.0%
ND3 (size: 343 bases) GC AT G C A T
Base content (bases) 156 187 113 43 86 101
Base content per 1 kb (bases) 455 545 329 125 251 294
Base content (%) 45.5% 54.5%
ND4 (size: 1337 bases) GC AT G C A T
Base content (bases) 545 792 423 122 347 445
Base content per 1 kb (bases) 408 592 316 91 260 333
Base content (%) 40.8% 59.2%
ND4L (size: 291 bases) GC AT G C A T
Base content (bases) 103 188 75 28 82 106
Base content per 1 kb (bases) 354 646 258 96 282 364
Base content (%) 35.4% 64.6%
ND5 (size: 1776 bases) GC AT G C A T
Base content (bases) 678 1098 524 154 433 665
Base content per 1 kb (bases) 382 618 295 87 244 374
Base content (%) 38.2% 61.8%
ND6 (size: 504 bases) GC AT G C A T
Base content (bases) 195 309 160 35 72 237
Base content per 1 kb (bases) 387 613 317 69 143 470
Base content (%) 38.7% 61.3%

ATP6 (size: 681 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 9 (3.98%)
Alanine (Ala, A)
n = 14 (6.19%)
Serine (Ser, S)
n = 12 (5.31%)
Threonine (Thr, T)
n = 26 (11.5%)
Cysteine (Cys, C)
n = 3 (1.33%)
Valine (Val, V)
n = 7 (3.1%)
Leucine (Leu, L)
n = 49 (21.68%)
Isoleucine (Ile, I)
n = 21 (9.29%)
Methionine (Met, M)
n = 19 (8.41%)
Proline (Pro, P)
n = 14 (6.19%)
Phenylalanine (Phe, F)
n = 7 (3.1%)
Tyrosine (Tyr, Y)
n = 4 (1.77%)
Tryptophan (Trp, W)
n = 2 (0.88%)
Aspartic acid (Asp, D)
n = 0 (0%)
Glutamic acid (Glu, E)
n = 6 (2.65%)
Asparagine (Asn, N)
n = 12 (5.31%)
Glutamine (Gln, Q)
n = 6 (2.65%)
Histidine (His, H)
n = 6 (2.65%)
Lysine (Lys, K)
n = 6 (2.65%)
Arginine (Arg, R)
n = 3 (1.33%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
9 12 17 5 11 24 1 8 5 1 1 1 4 1 4 3
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
2 1 2 5 4 5 0 1 4 4 0 1 2 11 0 7
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
7 12 0 0 2 6 0 1 3 3 1 1 0 5 7 2
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
4 6 0 0 0 6 0 1 1 1 0 0 0 1 0 1
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
36 70 88 33
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
21 62 41 103
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
6 64 111 46
ATP8 (size: 165 bases)
Amino acid sequence: MPQLSTAHIFLIHLWTWFVLYLITQKIKTVLMNKTPTNAPPMKPNKPTPTLPWT*
Amino acid frequencies:
Glycine (Gly, G)
n = 0 (0%)
Alanine (Ala, A)
n = 2 (3.7%)
Serine (Ser, S)
n = 1 (1.85%)
Threonine (Thr, T)
n = 9 (16.67%)
Cysteine (Cys, C)
n = 0 (0%)
Valine (Val, V)
n = 2 (3.7%)
Leucine (Leu, L)
n = 7 (12.96%)
Isoleucine (Ile, I)
n = 4 (7.41%)
Methionine (Met, M)
n = 3 (5.56%)
Proline (Pro, P)
n = 8 (14.81%)
Phenylalanine (Phe, F)
n = 2 (3.7%)
Tyrosine (Tyr, Y)
n = 1 (1.85%)
Tryptophan (Trp, W)
n = 3 (5.56%)
Aspartic acid (Asp, D)
n = 0 (0%)
Glutamic acid (Glu, E)
n = 0 (0%)
Asparagine (Asn, N)
n = 3 (5.56%)
Glutamine (Gln, Q)
n = 2 (3.7%)
Histidine (His, H)
n = 2 (3.7%)
Lysine (Lys, K)
n = 5 (9.26%)
Arginine (Arg, R)
n = 0 (0%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
2 2 2 0 2 3 0 2 1 1 0 1 1 0 1 1
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
1 0 0 0 1 0 1 0 0 0 0 2 0 6 0 2
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
2 5 0 0 0 0 0 0 1 0 1 1 0 3 0 0
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
2 0 0 0 0 5 0 0 0 0 0 0 0 1 0 2
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
4 17 25 9
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
4 19 14 18
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
4 13 28 10
COX1 (size: 1602 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 45 (8.44%)
Alanine (Ala, A)
n = 36 (6.75%)
Serine (Ser, S)
n = 38 (7.13%)
Threonine (Thr, T)
n = 41 (7.69%)
Cysteine (Cys, C)
n = 4 (0.75%)
Valine (Val, V)
n = 30 (5.63%)
Leucine (Leu, L)
n = 61 (11.44%)
Isoleucine (Ile, I)
n = 44 (8.26%)
Methionine (Met, M)
n = 32 (6.0%)
Proline (Pro, P)
n = 33 (6.19%)
Phenylalanine (Phe, F)
n = 44 (8.26%)
Tyrosine (Tyr, Y)
n = 19 (3.56%)
Tryptophan (Trp, W)
n = 19 (3.56%)
Aspartic acid (Asp, D)
n = 13 (2.44%)
Glutamic acid (Glu, E)
n = 10 (1.88%)
Asparagine (Asn, N)
n = 18 (3.38%)
Glutamine (Gln, Q)
n = 7 (1.31%)
Histidine (His, H)
n = 17 (3.19%)
Lysine (Lys, K)
n = 13 (2.44%)
Arginine (Arg, R)
n = 9 (1.69%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
19 25 28 4 10 30 6 10 6 1 6 4 18 2 12 32
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
4 1 3 5 15 16 0 7 15 22 1 3 14 14 2 9
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
13 18 1 7 9 13 2 1 6 7 12 2 1 6 12 3
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
14 9 1 5 8 12 1 3 2 4 0 1 0 0 0 17
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
134 116 156 128
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
85 141 97 211
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
24 194 218 98
COX2 (size: 685 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 9 (3.96%)
Alanine (Ala, A)
n = 18 (7.93%)
Serine (Ser, S)
n = 17 (7.49%)
Threonine (Thr, T)
n = 22 (9.69%)
Cysteine (Cys, C)
n = 3 (1.32%)
Valine (Val, V)
n = 18 (7.93%)
Leucine (Leu, L)
n = 29 (12.78%)
Isoleucine (Ile, I)
n = 10 (4.41%)
Methionine (Met, M)
n = 11 (4.85%)
Proline (Pro, P)
n = 13 (5.73%)
Phenylalanine (Phe, F)
n = 8 (3.52%)
Tyrosine (Tyr, Y)
n = 7 (3.08%)
Tryptophan (Trp, W)
n = 5 (2.2%)
Aspartic acid (Asp, D)
n = 9 (3.96%)
Glutamic acid (Glu, E)
n = 16 (7.05%)
Asparagine (Asn, N)
n = 5 (2.2%)
Glutamine (Gln, Q)
n = 12 (5.29%)
Histidine (His, H)
n = 7 (3.08%)
Lysine (Lys, K)
n = 3 (1.32%)
Arginine (Arg, R)
n = 6 (2.64%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
4 6 9 3 4 13 4 4 9 3 1 4 13 0 3 5
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
2 1 2 3 4 11 0 1 1 6 1 1 0 12 0 2
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
7 12 1 1 2 11 0 0 3 0 7 1 1 2 3 3
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
4 15 1 1 8 3 0 0 2 4 0 0 0 0 0 4
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
70 62 54 42
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
26 67 59 76
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
14 62 126 26
COX3 (size: 784 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 19 (7.31%)
Alanine (Ala, A)
n = 16 (6.15%)
Serine (Ser, S)
n = 19 (7.31%)
Threonine (Thr, T)
n = 25 (9.62%)
Cysteine (Cys, C)
n = 1 (0.38%)
Valine (Val, V)
n = 16 (6.15%)
Leucine (Leu, L)
n = 35 (13.46%)
Isoleucine (Ile, I)
n = 16 (6.15%)
Methionine (Met, M)
n = 11 (4.23%)
Proline (Pro, P)
n = 11 (4.23%)
Phenylalanine (Phe, F)
n = 17 (6.54%)
Tyrosine (Tyr, Y)
n = 12 (4.62%)
Tryptophan (Trp, W)
n = 12 (4.62%)
Aspartic acid (Asp, D)
n = 4 (1.54%)
Glutamic acid (Glu, E)
n = 9 (3.46%)
Asparagine (Asn, N)
n = 6 (2.31%)
Glutamine (Gln, Q)
n = 7 (2.69%)
Histidine (His, H)
n = 16 (6.15%)
Lysine (Lys, K)
n = 5 (1.92%)
Arginine (Arg, R)
n = 4 (1.54%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
2 14 6 4 4 22 0 4 7 0 2 5 8 1 3 14
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
5 0 1 2 7 7 0 4 6 6 3 1 3 7 0 2
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
15 8 0 2 3 10 0 0 4 6 6 1 1 1 5 5
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
11 9 0 1 3 5 0 0 1 3 0 0 0 0 0 11
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
64 68 67 62
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
40 67 59 95
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
11 102 113 35
CYTB (size: 1117 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 19 (5.12%)
Alanine (Ala, A)
n = 19 (5.12%)
Serine (Ser, S)
n = 28 (7.55%)
Threonine (Thr, T)
n = 42 (11.32%)
Cysteine (Cys, C)
n = 2 (0.54%)
Valine (Val, V)
n = 9 (2.43%)
Leucine (Leu, L)
n = 48 (12.94%)
Isoleucine (Ile, I)
n = 43 (11.59%)
Methionine (Met, M)
n = 19 (5.12%)
Proline (Pro, P)
n = 20 (5.39%)
Phenylalanine (Phe, F)
n = 30 (8.09%)
Tyrosine (Tyr, Y)
n = 14 (3.77%)
Tryptophan (Trp, W)
n = 12 (3.23%)
Aspartic acid (Asp, D)
n = 8 (2.16%)
Glutamic acid (Glu, E)
n = 6 (1.62%)
Asparagine (Asn, N)
n = 20 (5.39%)
Glutamine (Gln, Q)
n = 7 (1.89%)
Histidine (His, H)
n = 12 (3.23%)
Lysine (Lys, K)
n = 8 (2.16%)
Arginine (Arg, R)
n = 6 (1.62%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
19 24 16 7 8 25 4 4 7 0 1 3 4 1 6 24
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
3 0 2 3 7 9 0 3 5 8 3 1 6 13 0 3
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
22 17 0 5 9 11 1 0 2 6 8 1 0 3 17 1
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
11 5 1 2 6 7 1 1 1 4 0 0 0 0 0 11
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
61 89 134 88
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
41 107 75 149
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
15 155 141 61
ND1 (size: 964 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 17 (5.31%)
Alanine (Ala, A)
n = 18 (5.63%)
Serine (Ser, S)
n = 25 (7.81%)
Threonine (Thr, T)
n = 34 (10.63%)
Cysteine (Cys, C)
n = 1 (0.31%)
Valine (Val, V)
n = 7 (2.19%)
Leucine (Leu, L)
n = 63 (19.69%)
Isoleucine (Ile, I)
n = 24 (7.5%)
Methionine (Met, M)
n = 23 (7.19%)
Proline (Pro, P)
n = 25 (7.81%)
Phenylalanine (Phe, F)
n = 13 (4.06%)
Tyrosine (Tyr, Y)
n = 10 (3.13%)
Tryptophan (Trp, W)
n = 8 (2.5%)
Aspartic acid (Asp, D)
n = 4 (1.25%)
Glutamic acid (Glu, E)
n = 11 (3.44%)
Asparagine (Asn, N)
n = 14 (4.38%)
Glutamine (Gln, Q)
n = 8 (2.5%)
Histidine (His, H)
n = 1 (0.31%)
Lysine (Lys, K)
n = 7 (2.19%)
Arginine (Arg, R)
n = 8 (2.5%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
6 18 22 2 15 33 6 7 8 0 4 1 2 0 3 10
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
1 0 1 6 6 6 0 2 5 8 2 4 7 14 0 8
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
14 12 0 2 9 14 0 0 0 3 7 2 0 3 11 0
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
1 10 1 1 3 7 0 0 3 5 0 0 0 0 0 6
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
57 98 102 64
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
34 102 55 130
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
12 111 154 44
ND2 (size: 1030 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 9 (2.63%)
Alanine (Ala, A)
n = 26 (7.6%)
Serine (Ser, S)
n = 24 (7.02%)
Threonine (Thr, T)
n = 69 (20.18%)
Cysteine (Cys, C)
n = 1 (0.29%)
Valine (Val, V)
n = 8 (2.34%)
Leucine (Leu, L)
n = 50 (14.62%)
Isoleucine (Ile, I)
n = 26 (7.6%)
Methionine (Met, M)
n = 33 (9.65%)
Proline (Pro, P)
n = 20 (5.85%)
Phenylalanine (Phe, F)
n = 8 (2.34%)
Tyrosine (Tyr, Y)
n = 6 (1.75%)
Tryptophan (Trp, W)
n = 10 (2.92%)
Aspartic acid (Asp, D)
n = 2 (0.58%)
Glutamic acid (Glu, E)
n = 6 (1.75%)
Asparagine (Asn, N)
n = 12 (3.51%)
Glutamine (Gln, Q)
n = 6 (1.75%)
Histidine (His, H)
n = 11 (3.22%)
Lysine (Lys, K)
n = 12 (3.51%)
Arginine (Arg, R)
n = 4 (1.17%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
12 14 31 2 7 25 6 9 3 3 2 3 3 0 3 5
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
2 0 1 3 11 12 0 0 4 5 0 1 4 15 0 8
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
23 38 0 9 5 4 1 0 5 2 4 0 1 4 8 2
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
9 6 0 1 1 12 0 0 0 4 0 0 0 0 0 10
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
51 81 157 54
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
29 134 55 125
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
13 104 177 49
ND3 (size: 1030 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 9 (2.63%)
Alanine (Ala, A)
n = 26 (7.6%)
Serine (Ser, S)
n = 24 (7.02%)
Threonine (Thr, T)
n = 69 (20.18%)
Cysteine (Cys, C)
n = 1 (0.29%)
Valine (Val, V)
n = 8 (2.34%)
Leucine (Leu, L)
n = 50 (14.62%)
Isoleucine (Ile, I)
n = 26 (7.6%)
Methionine (Met, M)
n = 33 (9.65%)
Proline (Pro, P)
n = 20 (5.85%)
Phenylalanine (Phe, F)
n = 8 (2.34%)
Tyrosine (Tyr, Y)
n = 6 (1.75%)
Tryptophan (Trp, W)
n = 10 (2.92%)
Aspartic acid (Asp, D)
n = 2 (0.58%)
Glutamic acid (Glu, E)
n = 6 (1.75%)
Asparagine (Asn, N)
n = 12 (3.51%)
Glutamine (Gln, Q)
n = 6 (1.75%)
Histidine (His, H)
n = 11 (3.22%)
Lysine (Lys, K)
n = 12 (3.51%)
Arginine (Arg, R)
n = 4 (1.17%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
12 14 31 2 7 25 6 9 3 3 2 3 3 0 3 5
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
2 0 1 3 11 12 0 0 4 5 0 1 4 15 0 8
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
23 38 0 9 5 4 1 0 5 2 4 0 1 4 8 2
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
9 6 0 1 1 12 0 0 0 4 0 0 0 0 0 10
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
51 81 157 54
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
29 134 55 125
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
13 104 177 49
ND4 (size: 1337 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 15 (3.38%)
Alanine (Ala, A)
n = 31 (6.98%)
Serine (Ser, S)
n = 33 (7.43%)
Threonine (Thr, T)
n = 58 (13.06%)
Cysteine (Cys, C)
n = 4 (0.9%)
Valine (Val, V)
n = 4 (0.9%)
Leucine (Leu, L)
n = 86 (19.37%)
Isoleucine (Ile, I)
n = 39 (8.78%)
Methionine (Met, M)
n = 34 (7.66%)
Proline (Pro, P)
n = 24 (5.41%)
Phenylalanine (Phe, F)
n = 21 (4.73%)
Tyrosine (Tyr, Y)
n = 13 (2.93%)
Tryptophan (Trp, W)
n = 10 (2.25%)
Aspartic acid (Asp, D)
n = 3 (0.68%)
Glutamic acid (Glu, E)
n = 8 (1.8%)
Asparagine (Asn, N)
n = 12 (2.7%)
Glutamine (Gln, Q)
n = 18 (4.05%)
Histidine (His, H)
n = 12 (2.7%)
Lysine (Lys, K)
n = 11 (2.48%)
Arginine (Arg, R)
n = 9 (2.03%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
19 20 31 13 16 45 2 10 17 1 0 0 4 0 6 15
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
3 0 4 7 13 11 0 2 6 2 5 3 5 16 0 7
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
23 25 3 3 11 12 0 2 5 5 8 0 0 5 7 4
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
8 8 0 1 2 9 2 1 2 6 0 0 0 0 0 10
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
61 139 161 84
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
45 139 77 184
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
16 145 206 78
ND4L (size: 291 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 3 (3.13%)
Alanine (Ala, A)
n = 5 (5.21%)
Serine (Ser, S)
n = 8 (8.33%)
Threonine (Thr, T)
n = 11 (11.46%)
Cysteine (Cys, C)
n = 2 (2.08%)
Valine (Val, V)
n = 5 (5.21%)
Leucine (Leu, L)
n = 19 (19.79%)
Isoleucine (Ile, I)
n = 9 (9.38%)
Methionine (Met, M)
n = 11 (11.46%)
Proline (Pro, P)
n = 2 (2.08%)
Phenylalanine (Phe, F)
n = 5 (5.21%)
Tyrosine (Tyr, Y)
n = 1 (1.04%)
Tryptophan (Trp, W)
n = 0 (0%)
Aspartic acid (Asp, D)
n = 1 (1.04%)
Glutamic acid (Glu, E)
n = 2 (2.08%)
Asparagine (Asn, N)
n = 4 (4.17%)
Glutamine (Gln, Q)
n = 2 (2.08%)
Histidine (His, H)
n = 1 (1.04%)
Lysine (Lys, K)
n = 3 (3.13%)
Arginine (Arg, R)
n = 2 (2.08%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
6 3 10 4 2 12 0 1 2 0 2 0 3 0 2 3
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
1 0 2 1 1 3 0 0 1 2 0 0 0 2 0 1
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
5 4 1 0 1 5 0 0 2 0 1 0 0 1 3 0
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
1 2 0 0 1 3 0 0 0 1 1 0 0 1 0 0
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
16 25 40 16
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
9 24 15 49
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
3 26 51 17
ND5 (size: 1776 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 23 (3.89%)
Alanine (Ala, A)
n = 34 (5.75%)
Serine (Ser, S)
n = 51 (8.63%)
Threonine (Thr, T)
n = 83 (14.04%)
Cysteine (Cys, C)
n = 2 (0.34%)
Valine (Val, V)
n = 7 (1.18%)
Leucine (Leu, L)
n = 92 (15.57%)
Isoleucine (Ile, I)
n = 60 (10.15%)
Methionine (Met, M)
n = 49 (8.29%)
Proline (Pro, P)
n = 23 (3.89%)
Phenylalanine (Phe, F)
n = 25 (4.23%)
Tyrosine (Tyr, Y)
n = 11 (1.86%)
Tryptophan (Trp, W)
n = 10 (1.69%)
Aspartic acid (Asp, D)
n = 11 (1.86%)
Glutamic acid (Glu, E)
n = 11 (1.86%)
Asparagine (Asn, N)
n = 37 (6.26%)
Glutamine (Gln, Q)
n = 16 (2.71%)
Histidine (His, H)
n = 13 (2.2%)
Lysine (Lys, K)
n = 24 (4.06%)
Arginine (Arg, R)
n = 9 (1.52%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
23 37 47 7 16 48 4 16 16 0 0 3 3 1 7 18
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
2 0 2 6 13 14 1 2 9 10 2 7 3 13 0 9
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
35 36 3 5 12 27 0 2 5 6 5 1 1 8 29 2
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
11 11 0 5 6 22 2 1 0 8 0 0 0 1 0 9
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
86 136 260 110
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
51 184 124 233
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
17 204 281 90
ND6 (size: 504 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 20 (11.98%)
Alanine (Ala, A)
n = 6 (3.59%)
Serine (Ser, S)
n = 10 (5.99%)
Threonine (Thr, T)
n = 3 (1.8%)
Cysteine (Cys, C)
n = 6 (3.59%)
Valine (Val, V)
n = 27 (16.17%)
Leucine (Leu, L)
n = 28 (16.77%)
Isoleucine (Ile, I)
n = 5 (2.99%)
Methionine (Met, M)
n = 11 (6.59%)
Proline (Pro, P)
n = 3 (1.8%)
Phenylalanine (Phe, F)
n = 14 (8.38%)
Tyrosine (Tyr, Y)
n = 12 (7.19%)
Tryptophan (Trp, W)
n = 5 (2.99%)
Aspartic acid (Asp, D)
n = 3 (1.8%)
Glutamic acid (Glu, E)
n = 4 (2.4%)
Asparagine (Asn, N)
n = 1 (0.6%)
Glutamine (Gln, Q)
n = 0 (0%)
Histidine (His, H)
n = 0 (0%)
Lysine (Lys, K)
n = 5 (2.99%)
Arginine (Arg, R)
n = 4 (2.4%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
3 2 4 4 0 0 0 3 0 0 12 0 5 10 14 0
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
7 4 2 4 2 0 0 13 0 0 7 3 0 0 0 0
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
1 2 0 4 0 0 1 5 0 12 0 4 21 1 0 0
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
0 0 4 3 0 1 4 4 0 0 0 0 1 0 0 1
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
60 11 31 66
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
41 17 25 85
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
59 7 16 86
Total protein-coding genes (size: 11279 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 193 (5.14%)
Alanine (Ala, A)
n = 233 (6.2%)
Serine (Ser, S)
n = 273 (7.27%)
Threonine (Thr, T)
n = 440 (11.71%)
Cysteine (Cys, C)
n = 30 (0.8%)
Valine (Val, V)
n = 144 (3.83%)
Leucine (Leu, L)
n = 590 (15.71%)
Isoleucine (Ile, I)
n = 312 (8.31%)
Methionine (Met, M)
n = 258 (6.87%)
Proline (Pro, P)
n = 204 (5.43%)
Phenylalanine (Phe, F)
n = 200 (5.32%)
Tyrosine (Tyr, Y)
n = 112 (2.98%)
Tryptophan (Trp, W)
n = 99 (2.64%)
Aspartic acid (Asp, D)
n = 61 (1.62%)
Glutamic acid (Glu, E)
n = 93 (2.48%)
Asparagine (Asn, N)
n = 149 (3.97%)
Glutamine (Gln, Q)
n = 93 (2.48%)
Histidine (His, H)
n = 98 (2.61%)
Lysine (Lys, K)
n = 104 (2.77%)
Arginine (Arg, R)
n = 65 (1.73%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
129 183 225 58 99 290 36 80 83 10 32 27 69 16 65 135
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
33 7 23 48 87 96 2 35 58 75 25 29 46 126 3 59
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
173 198 10 39 66 114 5 11 38 50 62 14 27 43 106 22
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
76 85 8 21 40 94 10 11 12 41 1 1 1 4 0 85
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
724 943 1314 776
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
438 1101 714 1504
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
201 1231 1666 659 

Error: F​a​i​l​e​d​ t​o​ u​n​d​e​r​s​t​a​n​d​ i​d​:​ ?​t​e​r​m​=​(​"​O​p​h​i​o​p​h​a​g​u​s​
F​a​i​l​e​d​ t​o​ u​n​d​e​r​s​t​a​n​d​ i​d​:​ h​a​n​n​a​h​"​[​O​r​g​a​n​i​s​m​]​)​
F​a​i​l​e​d​ t​o​ u​n​d​e​r​s​t​a​n​d​ i​d​:​ A​N​D​
F​a​i​l​e​d​ t​o​ u​n​d​e​r​s​t​a​n​d​ i​d​:​ (​r​e​f​s​e​q​[​f​i​l​t​e​r​]​
F​a​i​l​e​d​ t​o​ u​n​d​e​r​s​t​a​n​d​ i​d​:​ A​N​D​
F​a​i​l​e​d​ t​o​ u​n​d​e​r​s​t​a​n​d​ i​d​:​ m​i​t​o​c​h​o​n​d​r​i​o​n​[​f​i​l​t​e​r​]​)​
Contact: Vadim E. Fraifeld, MD, PhD

Head: Lab for the Biology of Aging, The Shraga Segal Department of Microbiology, Immunology and Genetics, Faculty of Health Sciences, Ben-Gurion University of the Negev
P.O. Box 653, Beer-Sheva 8410501, Israel

Email:
How to cite us:

If you would like to cite this database please use:
Toren D, Barzilay T, Tacutu R, Lehmann G, Muradian KK, Fraifeld VE. MitoAge: a database for comparative analysis of mitochondrial DNA, with a special focus on animal longevity. Nucleic Acids Res. 2016; 44(D1):D1262-5.