Viewing data for Polyodon spathula
| Scientific name | Polyodon spathula |
| Common name | Mississippi paddlefish |
| Maximum lifespan | 55.00 years (Polyodon spathula@AnAge) |
| Total mtDNA (size: 16512 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 7497 | 9009 | 4930 | 2567 | 3943 | 5066 |
| Base content per 1 kb (bases) | 454 | 546 | 299 | 155 | 239 | 307 |
| Base content (%) | 45.4% | 54.6% | ||||
| Total protein-coding genes (size: 11421 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 5304 | 6117 | 3679 | 1625 | 2765 | 3352 |
| Base content per 1 kb (bases) | 464 | 536 | 322 | 142 | 242 | 293 |
| Base content (%) | 46.4% | 53.6% | ||||
| D-loop (size: 807 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 252 | 555 | 167 | 85 | 259 | 296 |
| Base content per 1 kb (bases) | 312 | 688 | 207 | 105 | 321 | 367 |
| Base content (%) | 31.2% | 68.8% | ||||
| Total tRNA-coding genes (size: 1563 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 685 | 878 | 383 | 302 | 391 | 487 |
| Base content per 1 kb (bases) | 438 | 562 | 245 | 193 | 250 | 312 |
| Base content (%) | 43.8% | 56.2% | ||||
| Total rRNA-coding genes (size: 2656 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 1223 | 1427 | 682 | 541 | 514 | 913 |
| Base content per 1 kb (bases) | 460 | 537 | 257 | 204 | 194 | 344 |
| Base content (%) | 46.0% | 53.7% | ||||
| 12S rRNA gene (size: 959 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 476 | 483 | 267 | 209 | 178 | 305 |
| Base content per 1 kb (bases) | 496 | 504 | 278 | 218 | 186 | 318 |
| Base content (%) | 49.6% | 50.4% | ||||
| 16S rRNA gene (size: 1697 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 747 | 944 | 415 | 332 | 336 | 608 |
| Base content per 1 kb (bases) | 440 | 556 | 245 | 196 | 198 | 358 |
| Base content (%) | 44.0% | 55.6% | ||||
| ATP6 (size: 683 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 329 | 354 | 232 | 97 | 174 | 180 |
| Base content per 1 kb (bases) | 482 | 518 | 340 | 142 | 255 | 264 |
| Base content (%) | 48.2% | 51.8% | ||||
| ATP8 (size: 168 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 61 | 107 | 46 | 15 | 48 | 59 |
| Base content per 1 kb (bases) | 363 | 637 | 274 | 89 | 286 | 351 |
| Base content (%) | 36.3% | 63.7% | ||||
| COX1 (size: 1554 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 733 | 821 | 444 | 289 | 438 | 383 |
| Base content per 1 kb (bases) | 472 | 528 | 286 | 186 | 282 | 246 |
| Base content (%) | 47.2% | 52.8% | ||||
| COX2 (size: 699 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 302 | 397 | 194 | 108 | 171 | 226 |
| Base content per 1 kb (bases) | 432 | 568 | 278 | 155 | 245 | 323 |
| Base content (%) | 43.2% | 56.8% | ||||
| COX3 (size: 785 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 383 | 402 | 244 | 139 | 197 | 205 |
| Base content per 1 kb (bases) | 488 | 512 | 311 | 177 | 251 | 261 |
| Base content (%) | 48.8% | 51.2% | ||||
| CYTB (size: 1141 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 535 | 606 | 373 | 162 | 291 | 315 |
| Base content per 1 kb (bases) | 469 | 531 | 327 | 142 | 255 | 276 |
| Base content (%) | 46.9% | 53.1% | ||||
| ND1 (size: 975 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 464 | 511 | 335 | 129 | 237 | 274 |
| Base content per 1 kb (bases) | 476 | 524 | 344 | 132 | 243 | 281 |
| Base content (%) | 47.6% | 52.4% | ||||
| ND2 (size: 1046 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 472 | 574 | 357 | 115 | 224 | 350 |
| Base content per 1 kb (bases) | 451 | 549 | 341 | 110 | 214 | 335 |
| Base content (%) | 45.1% | 54.9% | ||||
| ND3 (size: 349 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 164 | 185 | 109 | 55 | 97 | 88 |
| Base content per 1 kb (bases) | 470 | 530 | 312 | 158 | 278 | 252 |
| Base content (%) | 47.0% | 53.0% | ||||
| ND4 (size: 1381 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 636 | 745 | 438 | 198 | 334 | 411 |
| Base content per 1 kb (bases) | 461 | 539 | 317 | 143 | 242 | 298 |
| Base content (%) | 46.1% | 53.9% | ||||
| ND4L (size: 297 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 155 | 142 | 110 | 45 | 72 | 70 |
| Base content per 1 kb (bases) | 522 | 478 | 370 | 152 | 242 | 236 |
| Base content (%) | 52.2% | 47.8% | ||||
| ND5 (size: 1842 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 839 | 1003 | 619 | 220 | 429 | 574 |
| Base content per 1 kb (bases) | 455 | 545 | 336 | 119 | 233 | 312 |
| Base content (%) | 45.5% | 54.5% | ||||
| ND6 (size: 522 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 237 | 285 | 181 | 56 | 60 | 225 |
| Base content per 1 kb (bases) | 454 | 546 | 347 | 107 | 115 | 431 |
| Base content (%) | 45.4% | 54.6% | ||||
| ATP6 (size: 683 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
Amino acid frequencies:
Glycine (Gly, G)
n = 10 (4.42%) 
Alanine (Ala, A)
n = 19 (8.41%) 
Serine (Ser, S)
n = 7 (3.1%) 
Threonine (Thr, T)
n = 21 (9.29%) 
Cysteine (Cys, C)
n = 0 (0%) 
Valine (Val, V)
n = 16 (7.08%) 
Leucine (Leu, L)
n = 55 (24.34%) 
Isoleucine (Ile, I)
n = 19 (8.41%) 
Methionine (Met, M)
n = 9 (3.98%) 
Proline (Pro, P)
n = 17 (7.52%) 
Phenylalanine (Phe, F)
n = 11 (4.87%) 
Tyrosine (Tyr, Y)
n = 3 (1.33%) 
Tryptophan (Trp, W)
n = 5 (2.21%) 
Aspartic acid (Asp, D)
n = 1 (0.44%) 
Glutamic acid (Glu, E)
n = 4 (1.77%) 
Asparagine (Asn, N)
n = 10 (4.42%) 
Glutamine (Gln, Q)
n = 9 (3.98%) 
Histidine (His, H)
n = 4 (1.77%) 
Lysine (Lys, K)
n = 1 (0.44%) 
Arginine (Arg, R)
n = 6 (2.65%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 10 | 9 | 3 | 5 | 13 | 24 | 6 | 4 | 9 | 0 | 1 | 7 | 4 | 4 | 6 | 5 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 6 | 0 | 0 | 2 | 11 | 6 | 0 | 0 | 7 | 2 | 1 | 3 | 7 | 7 | 0 | 3 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 9 | 9 | 0 | 0 | 1 | 1 | 0 | 0 | 5 | 1 | 2 | 0 | 3 | 3 | 7 | 1 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 3 | 3 | 1 | 0 | 1 | 1 | 0 | 0 | 2 | 4 | 0 | 0 | 0 | 0 | 0 | 5 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 50 | 84 | 65 | 28 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 26 | 59 | 32 | 110 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 21 | 89 | 82 | 35 | ||||||||||||
| ATP8 (size: 168 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: MPQLNPSPWFMILVFSWLVFLIILPPKVLSHTFTNEPTHKNAEKIKPEPWTWPWS* | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 0 (0%)
Alanine (Ala, A)
n = 1 (1.82%)
Serine (Ser, S)
n = 4 (7.27%)
Threonine (Thr, T)
n = 4 (7.27%)
Cysteine (Cys, C)
n = 0 (0%)
Valine (Val, V)
n = 3 (5.45%)
Leucine (Leu, L)
n = 6 (10.91%)
Isoleucine (Ile, I)
n = 4 (7.27%)
Methionine (Met, M)
n = 2 (3.64%)
Proline (Pro, P)
n = 9 (16.36%)
Phenylalanine (Phe, F)
n = 4 (7.27%)
Tyrosine (Tyr, Y)
n = 0 (0%)
Tryptophan (Trp, W)
n = 5 (9.09%)
Aspartic acid (Asp, D)
n = 0 (0%)
Glutamic acid (Glu, E)
n = 3 (5.45%)
Asparagine (Asn, N)
n = 3 (5.45%)
Glutamine (Gln, Q)
n = 1 (1.82%)
Histidine (His, H)
n = 2 (3.64%)
Lysine (Lys, K)
n = 4 (7.27%)
Arginine (Arg, R)
n = 0 (0%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 4 | 0 | 1 | 1 | 0 | 4 | 0 | 1 | 1 | 0 | 2 | 1 | 0 | 0 | 2 | 2 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 1 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 2 | 4 | 3 | 0 | 0 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 3 | 1 | 0 | 0 | 1 | 1 | 0 | 1 | 1 | 0 | 0 | 0 | 0 | 3 | 0 | 1 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 1 | 3 | 0 | 0 | 0 | 4 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 5 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 7 | 17 | 19 | 13 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 7 | 16 | 14 | 19 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 1 | 13 | 26 | 16 | ||||||||||||
| COX1 (size: 1554 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 46 (8.9%)
Alanine (Ala, A)
n = 49 (9.48%)
Serine (Ser, S)
n = 29 (5.61%)
Threonine (Thr, T)
n = 35 (6.77%)
Cysteine (Cys, C)
n = 1 (0.19%)
Valine (Val, V)
n = 45 (8.7%)
Leucine (Leu, L)
n = 63 (12.19%)
Isoleucine (Ile, I)
n = 36 (6.96%)
Methionine (Met, M)
n = 24 (4.64%)
Proline (Pro, P)
n = 28 (5.42%)
Phenylalanine (Phe, F)
n = 42 (8.12%)
Tyrosine (Tyr, Y)
n = 19 (3.68%)
Tryptophan (Trp, W)
n = 17 (3.29%)
Aspartic acid (Asp, D)
n = 15 (2.9%)
Glutamic acid (Glu, E)
n = 10 (1.93%)
Asparagine (Asn, N)
n = 15 (2.9%)
Glutamine (Gln, Q)
n = 8 (1.55%)
Histidine (His, H)
n = 19 (3.68%)
Lysine (Lys, K)
n = 8 (1.55%)
Arginine (Arg, R)
n = 8 (1.55%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 15 | 21 | 14 | 11 | 8 | 22 | 10 | 10 | 6 | 2 | 8 | 12 | 18 | 7 | 17 | 25 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 10 | 0 | 1 | 12 | 26 | 11 | 0 | 4 | 19 | 15 | 8 | 6 | 14 | 8 | 0 | 5 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 12 | 17 | 1 | 6 | 7 | 9 | 2 | 2 | 3 | 8 | 11 | 2 | 2 | 9 | 6 | 1 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 18 | 8 | 2 | 5 | 10 | 8 | 0 | 3 | 1 | 3 | 1 | 0 | 0 | 1 | 0 | 15 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 165 | 114 | 123 | 116 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 77 | 136 | 95 | 210 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 47 | 194 | 165 | 112 | ||||||||||||
| COX2 (size: 699 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 9 (3.88%)
Alanine (Ala, A)
n = 15 (6.47%)
Serine (Ser, S)
n = 17 (7.33%)
Threonine (Thr, T)
n = 12 (5.17%)
Cysteine (Cys, C)
n = 2 (0.86%)
Valine (Val, V)
n = 20 (8.62%)
Leucine (Leu, L)
n = 28 (12.07%)
Isoleucine (Ile, I)
n = 18 (7.76%)
Methionine (Met, M)
n = 12 (5.17%)
Proline (Pro, P)
n = 15 (6.47%)
Phenylalanine (Phe, F)
n = 8 (3.45%)
Tyrosine (Tyr, Y)
n = 10 (4.31%)
Tryptophan (Trp, W)
n = 5 (2.16%)
Aspartic acid (Asp, D)
n = 11 (4.74%)
Glutamic acid (Glu, E)
n = 16 (6.9%)
Asparagine (Asn, N)
n = 6 (2.59%)
Glutamine (Gln, Q)
n = 8 (3.45%)
Histidine (His, H)
n = 10 (4.31%)
Lysine (Lys, K)
n = 4 (1.72%)
Arginine (Arg, R)
n = 6 (2.59%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 10 | 8 | 9 | 2 | 6 | 14 | 0 | 6 | 8 | 0 | 4 | 4 | 8 | 4 | 3 | 5 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 3 | 0 | 2 | 2 | 6 | 6 | 1 | 1 | 2 | 6 | 0 | 2 | 7 | 6 | 0 | 3 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 1 | 8 | 0 | 4 | 4 | 6 | 0 | 1 | 2 | 3 | 7 | 0 | 0 | 1 | 5 | 3 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 7 | 13 | 3 | 1 | 10 | 4 | 0 | 0 | 1 | 5 | 0 | 1 | 0 | 0 | 0 | 5 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 71 | 61 | 56 | 45 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 26 | 56 | 65 | 86 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 11 | 77 | 105 | 40 | ||||||||||||
| COX3 (size: 785 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 20 (7.69%)
Alanine (Ala, A)
n = 23 (8.85%)
Serine (Ser, S)
n = 13 (5.0%)
Threonine (Thr, T)
n = 22 (8.46%)
Cysteine (Cys, C)
n = 2 (0.77%)
Valine (Val, V)
n = 18 (6.92%)
Leucine (Leu, L)
n = 31 (11.92%)
Isoleucine (Ile, I)
n = 14 (5.38%)
Methionine (Met, M)
n = 9 (3.46%)
Proline (Pro, P)
n = 13 (5.0%)
Phenylalanine (Phe, F)
n = 23 (8.85%)
Tyrosine (Tyr, Y)
n = 12 (4.62%)
Tryptophan (Trp, W)
n = 12 (4.62%)
Aspartic acid (Asp, D)
n = 5 (1.92%)
Glutamic acid (Glu, E)
n = 10 (3.85%)
Asparagine (Asn, N)
n = 2 (0.77%)
Glutamine (Gln, Q)
n = 9 (3.46%)
Histidine (His, H)
n = 14 (5.38%)
Lysine (Lys, K)
n = 2 (0.77%)
Arginine (Arg, R)
n = 7 (2.69%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 3 | 11 | 5 | 4 | 8 | 9 | 5 | 3 | 8 | 1 | 2 | 7 | 8 | 1 | 10 | 13 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 4 | 1 | 1 | 3 | 9 | 9 | 2 | 1 | 6 | 11 | 2 | 2 | 7 | 4 | 0 | 1 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 10 | 11 | 0 | 2 | 4 | 3 | 1 | 0 | 3 | 3 | 9 | 0 | 2 | 0 | 2 | 3 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 11 | 9 | 1 | 1 | 4 | 2 | 0 | 1 | 2 | 4 | 0 | 0 | 0 | 0 | 0 | 12 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 76 | 69 | 52 | 64 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 44 | 68 | 54 | 95 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 19 | 107 | 98 | 37 | ||||||||||||
| CYTB (size: 1141 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 28 (7.39%)
Alanine (Ala, A)
n = 28 (7.39%)
Serine (Ser, S)
n = 22 (5.8%)
Threonine (Thr, T)
n = 24 (6.33%)
Cysteine (Cys, C)
n = 3 (0.79%)
Valine (Val, V)
n = 23 (6.07%)
Leucine (Leu, L)
n = 60 (15.83%)
Isoleucine (Ile, I)
n = 31 (8.18%)
Methionine (Met, M)
n = 10 (2.64%)
Proline (Pro, P)
n = 22 (5.8%)
Phenylalanine (Phe, F)
n = 29 (7.65%)
Tyrosine (Tyr, Y)
n = 14 (3.69%)
Tryptophan (Trp, W)
n = 13 (3.43%)
Aspartic acid (Asp, D)
n = 11 (2.9%)
Glutamic acid (Glu, E)
n = 4 (1.06%)
Asparagine (Asn, N)
n = 21 (5.54%)
Glutamine (Gln, Q)
n = 8 (2.11%)
Histidine (His, H)
n = 12 (3.17%)
Lysine (Lys, K)
n = 9 (2.37%)
Arginine (Arg, R)
n = 8 (2.11%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 9 | 22 | 8 | 10 | 21 | 22 | 3 | 4 | 6 | 2 | 4 | 4 | 14 | 1 | 7 | 22 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 2 | 1 | 2 | 4 | 16 | 8 | 0 | 4 | 6 | 14 | 4 | 0 | 8 | 14 | 0 | 1 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 11 | 11 | 1 | 2 | 12 | 7 | 0 | 0 | 1 | 4 | 10 | 0 | 0 | 2 | 19 | 2 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 10 | 3 | 1 | 3 | 8 | 8 | 1 | 0 | 0 | 8 | 0 | 0 | 0 | 0 | 0 | 13 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 94 | 106 | 96 | 84 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 53 | 95 | 79 | 153 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 15 | 172 | 140 | 53 | ||||||||||||
| ND1 (size: 975 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 18 (5.56%)
Alanine (Ala, A)
n = 33 (10.19%)
Serine (Ser, S)
n = 20 (6.17%)
Threonine (Thr, T)
n = 22 (6.79%)
Cysteine (Cys, C)
n = 1 (0.31%)
Valine (Val, V)
n = 13 (4.01%)
Leucine (Leu, L)
n = 62 (19.14%)
Isoleucine (Ile, I)
n = 27 (8.33%)
Methionine (Met, M)
n = 13 (4.01%)
Proline (Pro, P)
n = 24 (7.41%)
Phenylalanine (Phe, F)
n = 17 (5.25%)
Tyrosine (Tyr, Y)
n = 14 (4.32%)
Tryptophan (Trp, W)
n = 8 (2.47%)
Aspartic acid (Asp, D)
n = 4 (1.23%)
Glutamic acid (Glu, E)
n = 11 (3.4%)
Asparagine (Asn, N)
n = 12 (3.7%)
Glutamine (Gln, Q)
n = 6 (1.85%)
Histidine (His, H)
n = 5 (1.54%)
Lysine (Lys, K)
n = 7 (2.16%)
Arginine (Arg, R)
n = 7 (2.16%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 11 | 16 | 8 | 7 | 16 | 32 | 1 | 5 | 6 | 0 | 1 | 6 | 6 | 0 | 5 | 12 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 5 | 0 | 1 | 2 | 15 | 16 | 0 | 1 | 9 | 6 | 2 | 2 | 11 | 10 | 1 | 2 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 14 | 6 | 0 | 2 | 10 | 5 | 1 | 1 | 1 | 3 | 11 | 1 | 1 | 2 | 10 | 1 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 4 | 11 | 0 | 0 | 4 | 6 | 1 | 0 | 0 | 7 | 0 | 0 | 0 | 0 | 1 | 7 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 79 | 98 | 83 | 65 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 36 | 97 | 60 | 132 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 14 | 140 | 131 | 40 | ||||||||||||
| ND2 (size: 1046 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 16 (4.61%)
Alanine (Ala, A)
n = 34 (9.8%)
Serine (Ser, S)
n = 23 (6.63%)
Threonine (Thr, T)
n = 51 (14.7%)
Cysteine (Cys, C)
n = 1 (0.29%)
Valine (Val, V)
n = 6 (1.73%)
Leucine (Leu, L)
n = 62 (17.87%)
Isoleucine (Ile, I)
n = 25 (7.2%)
Methionine (Met, M)
n = 27 (7.78%)
Proline (Pro, P)
n = 18 (5.19%)
Phenylalanine (Phe, F)
n = 10 (2.88%)
Tyrosine (Tyr, Y)
n = 9 (2.59%)
Tryptophan (Trp, W)
n = 11 (3.17%)
Aspartic acid (Asp, D)
n = 1 (0.29%)
Glutamic acid (Glu, E)
n = 6 (1.73%)
Asparagine (Asn, N)
n = 15 (4.32%)
Glutamine (Gln, Q)
n = 14 (4.03%)
Histidine (His, H)
n = 5 (1.44%)
Lysine (Lys, K)
n = 10 (2.88%)
Arginine (Arg, R)
n = 4 (1.15%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 6 | 19 | 26 | 9 | 12 | 29 | 4 | 6 | 13 | 1 | 3 | 0 | 2 | 1 | 5 | 5 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 1 | 0 | 1 | 3 | 18 | 13 | 0 | 0 | 8 | 8 | 0 | 2 | 10 | 6 | 0 | 4 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 27 | 18 | 2 | 1 | 9 | 6 | 1 | 1 | 5 | 1 | 8 | 0 | 2 | 2 | 13 | 0 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 5 | 5 | 1 | 0 | 1 | 9 | 1 | 0 | 1 | 3 | 0 | 0 | 0 | 0 | 0 | 11 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 63 | 95 | 134 | 56 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 38 | 120 | 60 | 130 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 14 | 142 | 155 | 37 | ||||||||||||
| ND3 (size: 1046 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 16 (4.61%)
Alanine (Ala, A)
n = 34 (9.8%)
Serine (Ser, S)
n = 23 (6.63%)
Threonine (Thr, T)
n = 51 (14.7%)
Cysteine (Cys, C)
n = 1 (0.29%)
Valine (Val, V)
n = 6 (1.73%)
Leucine (Leu, L)
n = 62 (17.87%)
Isoleucine (Ile, I)
n = 25 (7.2%)
Methionine (Met, M)
n = 27 (7.78%)
Proline (Pro, P)
n = 18 (5.19%)
Phenylalanine (Phe, F)
n = 10 (2.88%)
Tyrosine (Tyr, Y)
n = 9 (2.59%)
Tryptophan (Trp, W)
n = 11 (3.17%)
Aspartic acid (Asp, D)
n = 1 (0.29%)
Glutamic acid (Glu, E)
n = 6 (1.73%)
Asparagine (Asn, N)
n = 15 (4.32%)
Glutamine (Gln, Q)
n = 14 (4.03%)
Histidine (His, H)
n = 5 (1.44%)
Lysine (Lys, K)
n = 10 (2.88%)
Arginine (Arg, R)
n = 4 (1.15%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 6 | 19 | 26 | 9 | 12 | 29 | 4 | 6 | 13 | 1 | 3 | 0 | 2 | 1 | 5 | 5 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 1 | 0 | 1 | 3 | 18 | 13 | 0 | 0 | 8 | 8 | 0 | 2 | 10 | 6 | 0 | 4 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 27 | 18 | 2 | 1 | 9 | 6 | 1 | 1 | 5 | 1 | 8 | 0 | 2 | 2 | 13 | 0 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 5 | 5 | 1 | 0 | 1 | 9 | 1 | 0 | 1 | 3 | 0 | 0 | 0 | 0 | 0 | 11 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 63 | 95 | 134 | 56 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 38 | 120 | 60 | 130 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 14 | 142 | 155 | 37 | ||||||||||||
| ND4 (size: 1381 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 25 (5.45%)
Alanine (Ala, A)
n = 42 (9.15%)
Serine (Ser, S)
n = 28 (6.1%)
Threonine (Thr, T)
n = 44 (9.59%)
Cysteine (Cys, C)
n = 6 (1.31%)
Valine (Val, V)
n = 14 (3.05%)
Leucine (Leu, L)
n = 85 (18.52%)
Isoleucine (Ile, I)
n = 46 (10.02%)
Methionine (Met, M)
n = 26 (5.66%)
Proline (Pro, P)
n = 27 (5.88%)
Phenylalanine (Phe, F)
n = 14 (3.05%)
Tyrosine (Tyr, Y)
n = 14 (3.05%)
Tryptophan (Trp, W)
n = 19 (4.14%)
Aspartic acid (Asp, D)
n = 3 (0.65%)
Glutamic acid (Glu, E)
n = 13 (2.83%)
Asparagine (Asn, N)
n = 12 (2.61%)
Glutamine (Gln, Q)
n = 12 (2.61%)
Histidine (His, H)
n = 9 (1.96%)
Lysine (Lys, K)
n = 10 (2.18%)
Arginine (Arg, R)
n = 11 (2.4%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 18 | 28 | 15 | 7 | 16 | 43 | 7 | 12 | 11 | 1 | 3 | 3 | 7 | 1 | 2 | 12 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 11 | 1 | 5 | 4 | 20 | 16 | 2 | 2 | 9 | 11 | 3 | 4 | 14 | 8 | 1 | 3 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 22 | 18 | 1 | 6 | 8 | 6 | 0 | 2 | 6 | 5 | 9 | 1 | 0 | 1 | 11 | 0 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 9 | 9 | 4 | 3 | 0 | 10 | 0 | 2 | 1 | 8 | 0 | 0 | 0 | 0 | 0 | 18 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 97 | 132 | 146 | 85 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 69 | 133 | 73 | 185 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 32 | 173 | 192 | 63 | ||||||||||||
| ND4L (size: 297 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 6 (6.12%)
Alanine (Ala, A)
n = 12 (12.24%)
Serine (Ser, S)
n = 9 (9.18%)
Threonine (Thr, T)
n = 9 (9.18%)
Cysteine (Cys, C)
n = 3 (3.06%)
Valine (Val, V)
n = 2 (2.04%)
Leucine (Leu, L)
n = 24 (24.49%)
Isoleucine (Ile, I)
n = 1 (1.02%)
Methionine (Met, M)
n = 6 (6.12%)
Proline (Pro, P)
n = 2 (2.04%)
Phenylalanine (Phe, F)
n = 6 (6.12%)
Tyrosine (Tyr, Y)
n = 0 (0%)
Tryptophan (Trp, W)
n = 1 (1.02%)
Aspartic acid (Asp, D)
n = 1 (1.02%)
Glutamic acid (Glu, E)
n = 3 (3.06%)
Asparagine (Asn, N)
n = 2 (2.04%)
Glutamine (Gln, Q)
n = 3 (3.06%)
Histidine (His, H)
n = 6 (6.12%)
Lysine (Lys, K)
n = 0 (0%)
Arginine (Arg, R)
n = 2 (2.04%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 1 | 0 | 5 | 3 | 10 | 7 | 1 | 2 | 3 | 0 | 1 | 0 | 1 | 0 | 2 | 4 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 1 | 0 | 3 | 0 | 9 | 3 | 0 | 0 | 2 | 4 | 0 | 0 | 1 | 1 | 0 | 0 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 6 | 1 | 2 | 2 | 3 | 1 | 1 | 0 | 2 | 0 | 0 | 1 | 1 | 0 | 2 | 2 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 4 | 3 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 2 | 0 | 0 | 0 | 1 | 0 | 0 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 24 | 34 | 20 | 21 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 14 | 30 | 16 | 39 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 7 | 46 | 34 | 12 | ||||||||||||
| ND5 (size: 1842 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 31 (5.06%)
Alanine (Ala, A)
n = 49 (7.99%)
Serine (Ser, S)
n = 40 (6.53%)
Threonine (Thr, T)
n = 65 (10.6%)
Cysteine (Cys, C)
n = 6 (0.98%)
Valine (Val, V)
n = 20 (3.26%)
Leucine (Leu, L)
n = 95 (15.5%)
Isoleucine (Ile, I)
n = 53 (8.65%)
Methionine (Met, M)
n = 31 (5.06%)
Proline (Pro, P)
n = 32 (5.22%)
Phenylalanine (Phe, F)
n = 41 (6.69%)
Tyrosine (Tyr, Y)
n = 11 (1.79%)
Tryptophan (Trp, W)
n = 14 (2.28%)
Aspartic acid (Asp, D)
n = 11 (1.79%)
Glutamic acid (Glu, E)
n = 11 (1.79%)
Asparagine (Asn, N)
n = 35 (5.71%)
Glutamine (Gln, Q)
n = 21 (3.43%)
Histidine (His, H)
n = 16 (2.61%)
Lysine (Lys, K)
n = 22 (3.59%)
Arginine (Arg, R)
n = 9 (1.47%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 21 | 32 | 25 | 13 | 25 | 35 | 11 | 10 | 20 | 1 | 4 | 9 | 5 | 2 | 8 | 33 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 6 | 2 | 4 | 7 | 27 | 13 | 2 | 0 | 12 | 19 | 0 | 2 | 14 | 14 | 2 | 5 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 36 | 22 | 2 | 3 | 15 | 12 | 0 | 0 | 10 | 1 | 10 | 0 | 1 | 5 | 30 | 2 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 14 | 11 | 0 | 1 | 10 | 22 | 0 | 1 | 0 | 8 | 0 | 0 | 0 | 0 | 1 | 14 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 122 | 162 | 216 | 114 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 70 | 176 | 128 | 240 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 28 | 281 | 230 | 75 | ||||||||||||
| ND6 (size: 522 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 21 (12.14%)
Alanine (Ala, A)
n = 15 (8.67%)
Serine (Ser, S)
n = 13 (7.51%)
Threonine (Thr, T)
n = 5 (2.89%)
Cysteine (Cys, C)
n = 2 (1.16%)
Valine (Val, V)
n = 29 (16.76%)
Leucine (Leu, L)
n = 31 (17.92%)
Isoleucine (Ile, I)
n = 4 (2.31%)
Methionine (Met, M)
n = 5 (2.89%)
Proline (Pro, P)
n = 4 (2.31%)
Phenylalanine (Phe, F)
n = 13 (7.51%)
Tyrosine (Tyr, Y)
n = 9 (5.2%)
Tryptophan (Trp, W)
n = 5 (2.89%)
Aspartic acid (Asp, D)
n = 5 (2.89%)
Glutamic acid (Glu, E)
n = 4 (2.31%)
Asparagine (Asn, N)
n = 2 (1.16%)
Glutamine (Gln, Q)
n = 0 (0%)
Histidine (His, H)
n = 1 (0.58%)
Lysine (Lys, K)
n = 1 (0.58%)
Arginine (Arg, R)
n = 4 (2.31%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 3 | 1 | 1 | 4 | 1 | 0 | 1 | 8 | 0 | 0 | 13 | 1 | 1 | 14 | 13 | 0 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 4 | 2 | 0 | 8 | 1 | 0 | 6 | 4 | 1 | 2 | 14 | 4 | 0 | 0 | 0 | 3 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 0 | 1 | 1 | 4 | 0 | 2 | 4 | 3 | 0 | 7 | 2 | 4 | 17 | 2 | 0 | 1 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 0 | 0 | 4 | 5 | 0 | 0 | 1 | 2 | 0 | 0 | 2 | 0 | 0 | 1 | 0 | 1 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 74 | 15 | 20 | 65 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 35 | 34 | 23 | 82 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 72 | 7 | 17 | 78 | ||||||||||||
| Total protein-coding genes (size: 11442 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 236 (6.19%)
Alanine (Ala, A)
n = 334 (8.77%)
Serine (Ser, S)
n = 231 (6.06%)
Threonine (Thr, T)
n = 320 (8.4%)
Cysteine (Cys, C)
n = 29 (0.76%)
Valine (Val, V)
n = 212 (5.56%)
Leucine (Leu, L)
n = 629 (16.51%)
Isoleucine (Ile, I)
n = 286 (7.51%)
Methionine (Met, M)
n = 178 (4.67%)
Proline (Pro, P)
n = 219 (5.75%)
Phenylalanine (Phe, F)
n = 225 (5.91%)
Tyrosine (Tyr, Y)
n = 117 (3.07%)
Tryptophan (Trp, W)
n = 120 (3.15%)
Aspartic acid (Asp, D)
n = 72 (1.89%)
Glutamic acid (Glu, E)
n = 101 (2.65%)
Asparagine (Asn, N)
n = 137 (3.6%)
Glutamine (Gln, Q)
n = 102 (2.68%)
Histidine (His, H)
n = 103 (2.7%)
Lysine (Lys, K)
n = 79 (2.07%)
Arginine (Arg, R)
n = 74 (1.94%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 113 | 173 | 123 | 79 | 139 | 253 | 52 | 76 | 94 | 8 | 47 | 55 | 74 | 36 | 82 | 143 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 55 | 7 | 22 | 49 | 163 | 109 | 13 | 18 | 82 | 102 | 34 | 31 | 102 | 82 | 4 | 31 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 155 | 124 | 10 | 33 | 78 | 60 | 10 | 11 | 39 | 38 | 79 | 10 | 30 | 32 | 105 | 17 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 86 | 84 | 17 | 20 | 52 | 75 | 4 | 9 | 9 | 53 | 3 | 1 | 0 | 4 | 2 | 110 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 955 | 1021 | 1051 | 784 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 510 | 1054 | 717 | 1530 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 288 | 1482 | 1424 | 617 | ||||||||||||
>NC_004419.1 Polyodon spathula mitochondrion, complete genome GCTAGTGTAGCTTAACTAAAGCATAACACTGAAGATGTTAAGATGGACCCTAGAAAGTCCCACAAGCACA AAGGCTTGGTCCTGGCCTTACTATCAATTTTAACCCAATTTACACATGCAAGTCTCCGCACCCCTGTGAG AATGCCCTTAATCCCCCACCACATAGGGGAAAAGGAGCAGGTATCAGGCACGCAACCGCAGCCCAAGACG CCTTGCTAAGCCACACCCCCAAGGGAACTCAGCAGTGATAAACATTGAGCCATGAGCGCAAGCTCGACTC AGCCAGAGTTAAGAGGGCCGGTAAAACTCGTGCCAGCCACCGCGGTTATACGAGAGGCCCCAACTGATAG TCCACGGCGTAAAGCGTGATTAAAGGACGCCCACTACACTAGAGTCAAAACCCCCCTAAGCTGTCATACG CATTTGGAGGCTCGAAGCCCAACCACGAAGGTAGCTCTACCTACAAGGACCCCTTGAACCCACGACAACC GAGACACAAACTGGGATTAGATACCCCACTATGCTCAGTCATAAACTTTGGTGATAAATTACACATATCA CCCGCCAGGGTACTACGAGCGCTAGCTTAAAACCCAAAGGACTTGGCGGTGCCCCAGACCCACCTAGAGG AGCCTGTTCTAGAACCGATAATCCCCGTTAAACCTCACCACTTCTTGTCATTTCCGCCTATATACCGCCG TCGTCAGCTTACCCTGTGAAAGACCAATAGTAAGCAAAAATGGCACACCCAAAAACGTCAGGTCGAGGTG TAGCGAATGAAGTGGAAAGAAATGGGCTACATTTTCTGACACAGAAAACACACGAATAACACTGTGAAAC CAGTGATTGAAGGTGGATTTAGCAGTAAAAAGAAAATAGAGAATTCTTTTGAAGCCGGCTATGGGGCGCG CACACACCGCCCGTCACTCTCCTCAAAGGAATACCCCCAGTATATAAAAATATAACCCAAGCAAGAGGAG GCAAGTCGTAACATGGTAAGTGTACCGGAAGGTGCACTTGGAACAACCAAAATGTGGCTCAATAGAAAAG CACCTCCCTTACACCGAGGAGACATCTGTGCAAATCAGATCATTTTGAGCTAAATAGCTAGCCTCACCAC AAACACACAAATAAATATTTATATATAACCCCCCATAAAAACAAAAAAAATAAACAAACCATTTAATTTC CCCAGTATAGGCGATAGAAAAGGACAAAACAGCGCAATAGAGAAAGTACCGCAAGGGAAAGCTGAAAGAG AAAATGAAACAACTTGTTAAAGCAACAAAAAGCAAAGATTAAATCTTGTACCTTTTGCATCATGATTTAG CCAGTTCTTGTCAGGCAAAGAGAACTTTAGTCTGACCCCCCGAAACTAGACGAGCTACTCCGAGACAGCC TAACAGGGCAAACCCGTCTCTGTGGCAAAAGAGTGGGAAGATCTCCGAGTAGAGGCGACAAACCTAACGA GCCTAGTAATAGCTGGTTGCTCAAGAAATGAATATTAGTTCAGCCTCAAGGCTTCTACTGTCAACCAGGT CATCACCAACAAAGACACCAAGAAAACCTTAAGAGTTATTCAAGAGAGGTACAGCTCCCTTGAAAAAGAA CACAACCTTAACAGGCGGATAAAGATCATATTCAAACCAAAGGAAATTTGTTTCAGTGGGCCTAAAAGCA GCCACCTGCACAGAAAGCGTTAAAGCTCAGACAAAACTCCACCCTATTATCCCGATAAAACAATCACAAT CCCYTAACTTACTGAGCTACTCTATACAACTATAGAAGCAATAATGCTAAATAGTAACANGAAGGCNCGA CCTTCTTCCCAGCACATGTGTAAGTCAAGATCGGACTCACCGCTGNCAAATAACGGACCCACCAAAGAGG GAAATNCRGAATACCAATGAAACTCAAGAAAACCTGTAAAACACAACCGTTAATCCCACACAGGAGTGCT CACCAAGGAAAGACTAAAAGAAAAAGAAGGAACTCGGCAAACACGAGCCTCGCCTGTTTACCAAAAACAT CGCCTCTTGCAAACAATGTATTAGAGGTCCCGCCTGCCCTGTGACCAAAAGTTTAACGGCCGCGGTATTT TGACCGTGCGAAGGTAGCGTAATCACTTGTCTTTTAAATGAAGACCTGTATGAATGGCATAACGAGGGCT CGACTGTCTCCTTTTTCCAGTCAGTGAAATTGACCTGCTCGTGCAGAGGCGAGCATAACCACATAAGACG AGAAGACCCTATGGAGCTTAAAACACAAGATCAACTATGCTATCAAGCCAACACACCAACAGGAATAACA GCTATAAGCATAATAGTACCTCTGATCCTAATGTTTTCGGTTGGGGCGACCACGGAGGACAAAAAAGCCT CCATGTCGACGGGGGCACTGCCCCTAAAACCTAGGGCGACAGCCCAAAGCAACAGAATATCTGACGAACA ATGATCCAGGCCCAGCCTGATCAACGAACCAAGTTACCCTAGGGATAACAGCGCAATCCTTTCTAAGAGT CCATATCGACGAAAGGGTTTACGACCTCGATGTTGGATCAGGACATCCTAATGGTGCAGCCGCTATTAAG GGTTCGTTTGTTCAACGATTAAAGTCCTACGTGATCTGAGTTCAGACCGGAGTAATCCAGGTCAGTTTCT ATCTATGCAGTGACCCTTCCTAGTACGAAAGGACCGGAAGGCTGGGGCCAATACTACAAGCACGCCCCAC CCCAACCTAATGAAAACAACTAAAATAGGTAAAGGGGCACAAACCTTTCCCCTAAAACAGGGCAAGCTAA GATGGCAGAGCTTGGTAATTGCAAAAGGCCTAAGCCCTTTCCAACAGAGGTTCAAATCCTCTTCTTAGCT ATGACCTCTCACCTGCTAACCTACCTAATCAATCCATTAGCATACATCATCCCCATCCTACTAGCAGTAG CATTCCTAACCCTTATTGAACGAAAAGTACTAGGCTACATACAACTACGAAAAGGCCCCAACATCGTTGG ACCCTACGGCTTACTACAACCCATTGCTGACGGTATCAAGCTATTCATTAAAGAACCTGTCCCGCCTACC ACAGCCTCCCCACTTCTATTCTTAGCAACTCCAATTCTAGCACTAACCTTAGCCCTCACCCTCTGAATAC CCCTACCCATGCCCTACTCAATTGCAGACCTCAACCTAGGCATCCTATTTATCCTAGCCCTCTCCAGTCT AGCAGTCTACTCAATCCTAGGATCCGGCTGAGCCTCCACTTCAAAATACGCCCTCATCGGGGCACTTCGA GCAGTAGCACAAACAATCTCCTACGAAGTAAGCCTAGGCCTAATTCTCCTATGCATGATTGTCTTCACCG GCAATTTTACCCTTCACACCTTTAACACCGCACAAGAAGCAATCTGACTACTCGCCCCAGGCTGACCCCT CGCAGCAATATGGTATATTTCCACCCTTGCAGAAACAAACCGAGCCCCATTTGACCTCACAGAAGGGGAA TCAGAACTAGTCTCTGGCTTCAACGTAGAATATGCAGGAGGACCATTCGCCCTATTCTTCCTAGCCGAAT ACGCCAACATTCTTCTAATAAACACCCTCTCCACAATCCTATTCCTCGGAGCCTACCACAACCCCATGTT CCCCGAAATAACAACCCTCAACCTCATAATTAAAGCCTCAATACTATCCATGCTATTCTTATGAGTCCGA GCCTCGTATCCACGATTCCGATACGACCAATTGATACATCTAGTATGAAAAAACTTTCTCCCCATCACCC TAGCCCTTGTCCTATGACACATTTCCCTCCCAATCGCCTCCGCTGGACTCCCACCACAAATCTAGCACAA TATAGGAACCGTGCCTGAAGGCCAAGGGCCACTTTGATAGAGTGGATAATAGGGGTTCAAGTCCCCTCGC TTCCTTAGAAAAAAGGGATTCGAACCCATCCTCAAGAGATCAAAACTCTTGGTGCTTCCACTACACCACT TCCTAGTAAAGTCAGCTAATTAAAGCTTTTGGGCCCATACCCCAAACATGTTGGTTAAAATCCTTCCTTT ATTAATGAACCCCTACGTATTTGCCATCCTGCTTTCAAGTCTAGGAATCGGAACCACCCTAACATTTGCA AGCTCCCACTGACTCCTAGCATGAATAGGCCTAGAAATCAACACACTAGCCATTATCCCACTAATAGCAC AACAACACCACCCCCGAGCAGTTGAGGCCACAACCAAGTACTTTCTAACCCAAGCAACGGCCGCAGCCAT AATTTTATTTGCTAGCACTACAAATGCCTGATTGACAGGAGAATGAAACATTCAAGAAATATCCAACCCC ACAGCCCTAACCTTAATCACCATAGCCCTGGCCCTTAAAATCGGACTTGCCCCCATCCACTACTGATTGC CAGAAGTATTACAAGGCCTTGACCTCACCACAGGACTTATCCTCTCTACCTGACAAAAACTAGCCCCATT CGCCCTAATTTACCAAATCAGCCCAATAATAAACCCCACCCTTATAATCACCCTAGGCCTAGCCTCCACC ATCGTTGGCGGATGAGGCGGATTAAACCAAACACAACTACGAAAAATCCTAGCATACTCATCCATCGCTC ACCTAGGCTGAATAATAGTTATCATACAATACTCCCCCAGCCTCGCCATACTTAACCTAACCCTCTACAT TATCATAACCACCGCAACTTTCCTGACATTCAAAAATGTGACCTCCACAAAACTAAACGCACTAGCCCTT ACCTGATCGAAAACCCCCATAATAACCACAATAGCAATAATAACCCTACTTTCCCTAGGAGGCCTCCCTC CACTAACAGGCTTTATACCCAAATGACTCATCCTACAAGAACTAACCAAACAAAACCTCCCCCTCACAGC ATCAATCATAGCTATAGCCGCCCTACTCAGCCTCTTCTTCTACCTACGAATATGCTATGCAATAACCTTA ACAATCTCCCCCAACACTAACAACAACACCTCAACGTGACGCCAAAAATCATCACAGACTACCATAACCC TCTCCATCACCACCCTACTGGCACTAACATTACTACCAACCACACCTACAATTATAGCCCTAATAACATA AGGGGCTTAGGATAAGCCTTAGACCAAAAGCCTTCAAAGCTTTAAGCAGGAGTGAAAATCTCCTAGCCCC TGTTAAGACTTGCAGGACATTACCCCACATCTTCTGAATGCAACCCAGATACTTTAATTAAGCTAAAGCC TTTCCTAGATGAGAAGGCCTCGATCCTACAAAATCTTAGTTAACAGCTAAGTGCCCTATCCAGCGAGCAT TCATCTACTTCCTCCCGCCAGGGAGGATAAAGGCTGGAGGAAGTCCCGGCAGGCGGCGAGCCCGCGTCTT CAGGTTTGCAATCTGATGTGGCCTCCACCACGGAACTTGGTAAGAAGAGGACTTTAACCTCTGTGCATGG GGCTACAATCCACCGCTTAAATACTCAGCCATCTTACCTGTGGCAATCACCCGTTGATTCTTTTCTACTA ACCACAAAGATATTGGCACCCTGTATTTAGTATTTGGTGCCTGAGCAGGCATAGTCGGCACAGCCCTCAG TCTACTGATTCGTGCCGAACTAAGCCAACCCGGTGCCTTACTTGGCGATGATCAAATCTATAATGTTATC GTCACAGCCCACGCCTTTGTCATGATTTTCTTTATAGTAATACCCATCATAATCGGCGGATTCGGAAATT GACTGGTCCCCCTGATAATCGGAGCTCCAGATATAGCCTTCCCTCGCATGAATAATATGAGTTTCTGGCT CCTACCCCCATCCTTCCTTCTCCTTTTGGCCTCCTCTGGGGTAGAGGCCGGAGCCGGCACCGGGTGAACT GTCTACCCCCCTCTGGCAGGAAACCTAGCCCACGCAGGAGCCTCTGTAGACCTTACCATCTTCTCCCTAC ACTTGGCTGGGGTGTCGTCTATCCTAGGGGCTATTAATTTTATCACTACGATTATCAACATAAAACCTCC CGCAGTATTTCAGTATCAAACCCCCCTATTCGTGTGATCTGTACTAGTTACAGCTGTACTCCTCCTCCTA TCACTACCAGTTCTAGCTGCAGGAATTACAATACTGCTGACAGATCGAAATTTAAATACCACATTCTTTG ACCCCGCCGGAGGGGGAGACCCCATCCTGTATCAGCACCTGTTCTGATTCTTCGGCCACCCAGAAGTATA TATTCTAATTTTACCTGGATTTGGCATGATTTCCCACATTGTAGCCTACTATGCAGGTAAAAAAGAACCC TTTGGATACATAGGCATGGTATGGGCTATAATGGCTATCGGCCTGCTAGGATTTATCGTGTGAGCCCACC ACATGTTTACAGTTGGAATAGACGTAGACACACGGGCCTATTTCACCTCCGCCACAATAATCATTGCCAT CCCAACAGGGGTCAAAGTCTTTAGCTGATTAGCCACCCTCCACGGCGGCTCAATCAAATGAGACACTCCC CTACTATGAGCCCTAGGCTTTATCTTCCTATTTACAGTGGGAGGCTTAACAGGAATTGTCTTAGCCAACT CATCCCTAGACATCGTGCTTCACGACACCTACTACGTTGTAGCACACTTTCACTACGTACTATCAATGGG GGCCGTATTTGCTATTATAGGGGCTTTCGTTCACTGATTCCCACTTTTCACAGGTTACACACTTCACAGC ACCTGATCTAAAATCCACTTTGCTGTAATGTTCGTAGGCGTCAATTTAACATTCTTCCCCCAACACTTCC TAGGCCTCGCAGGCATACCCCGTCGATACTCAGACTACCCCGACGCCTACGCCCTATGAAACACTGTCTC CTCAGTTGGCTCATTAATCTCGCTTATCGCTGTAATTATGTTCTTATTCATTCTTTGAGAAGCATTCGCA GCTAAACGAGAAGTCCTATCAGTCGAACTTACAGCCACAAATGTTGAGTGACTTCATGGCTGCCCACCTC CATACCACACCTATGAAGAACCTGCCTTCGTGCAAGTACAATCAACCAACTAACCTCGAGAAAGGAAGGA ATTGAACCCCCATTTACTGGTTTCAAGCCAGCCGCATAACCACTCTGCCACTTTCTTATCCCAATGAGAC ACTAGTAAAATTGCTATTACATTGCCTTGTCGAGGCAAAATTGCAGGTTAAAGCCCTGCGTGCCTTAAGT CCATGGACTAAATGGCACATCCATCACAATTAGGATTCCAAGACGCGGCCTCACCTGTTATAGAAGAACT TCTCCACTTTCATGACCACACACTAATGATTGTCTTCCTAATCAGTACTTTAGTACTTTACATTATTGTG GCCATAGTGTCAACTAAACTAACAAACAAATACGTACTAGACTCCCAAGAAATCGAAATTGTGTGAACAG TACTCCCAGCAGTAATCCTAATTTTAATCGCTCTACCCTCCCTCCGAATTCTCTACCTAATAGACGAAAT TAACGACCCTCACCTAACAATCAAAGCTATAGGACACCAATGATACTGAAGCTATGAATACACAGACTAC GAAAACTTAGGCTTTGACTCCTATATAATTCCCACACAAGACCTCACTCCCGGACAATTCCGACTACTAG AGACAGACCACCGAATAGTAGTACCCATGGAGTCCCCAATTCGAGTTTTAGTCTCTGCAGAAGATGTGCT CCACGCCTGAGCAGTACCCGCCCTAGGCATTAAAATAGACGCAGTACCAGGACGCCTAAACCAAACAGCC TTTATCACCTCACGACCAGGAGTTTATTACGGTCAATGCTCTGAAATCTGCGGAGCCAATCATAGCTTCA TACCCATCGTCGTTGAAGCAGTCCCCCTAGAGCACTTCGAAAACTGATCTTCATTAATACTAGAAGAATC TTCACCAAGAAGCTAAATAGGGACTAGCGTTAAGCCTTTTAAGCTAAAGATTGGTGGCCCCCAACCACCC TTAGTGACATGCCCCAACTAAATCCCAGTCCATGATTTATAATTTTAGTTTTTTCATGACTTGTCTTCCT AATTATTCTACCACCCAAAGTTCTAAGCCACACCTTCACAAATGAACCTACCCATAAAAATGCAGAAAAA ATTAAACCTGAACCCTGAACCTGACCATGATCCTAAGCTTTTTTGACCAATTCATGAGCCCCACACACCT GGGAATCCCTCTAATTGCCCTAGCACTTAGCCTCCCATGAATCCTCATCCCCACCCCCACTAACCGATGA CTAAACAATCGCCTCTTGACCCTACAAGCCTGATTTATTAACCGATTCACACAACAACTCATGCTTCCTA TCAATCTCGGCGGCCACAAATGAGCTGTCTTACTGACAGCCCTAATGCTACTTTTGATTACACTCAATCT ACTGGGCCTACTTCCATATACCTTTACTCCTACAACACAACTCTCCCTCAACATGGGGTTCGCCGTCCCC CTATGACTGGCCACCGTGATTATTGGCATACGAAACCAACCCACCGCCGCCCTAGGCCACCTACTACCAG AGGGAACCCCAGTGCCCCTCATTCCAGTCTTGATTGTCATCGAAACAATTAGCCTATTTATCCGCCCCCT GGCCTTAGGCGTCCGACTCACAGCAAACCTAACTGCAGGCCATCTATTAATCCAACTAATTGCTACCGCC GCATTCGTACTCCTTCCAATAATGCCAACCGTGGCCATTTTAACATCAGTAGTCCTATTCCTACTAACCC TGCTAGAAGTAGCCGTGGCAATAATCCAAGCATACGTATTTGTTCTCCTACTAAGCCTCTACCTACAAGA AAACGTCTAATGGCCCGCCAAGCACACGCATATCACATGGTCGACCCCAGCCCCTGACCCCTAACCGGTG CAGTAGCTGCCCTCCTGATGACATCAGGACTTGCAGTCTGATTCCACTTTAACTCCACAGTACTTATAAC AATAGGACTCGCCTTGCTTCTCTTAACCATGTACCAATGATGACGAGACATTATTCGAGAAGGCACATTT CAAGGACACCATACACCCCCTGTCCAAAAAGGACTCCGATATGGAATAATTTTATTTATCACCTCAGAAG TTTTCTTCTTTCTAGGCTTTTTCTGAGCATTCTACCACTCGAGCTTGGCACCCACACCAGAGCTAGGGGG ATGCTGACCTCCCACCGGCATCATCCCACTAGACCCCTTTGAAGTACCACTACTCAACACAGCAGTACTA CTAGCCTCCGGCGTTACAGTCACCTGAGCCCACCACAGCATCATAGAACGTGAACGCAAACAAACCATCC AAGCTCTGACCCTGACCATCCTGCTAGGGTTCTACTTTACAGCCCTGCAAGCGATAGAATACTACGAAGC CCCATTCACCATCGCCGACGGAGTGTACGGCTCCACCTTCTTCGTCGCAACAGGATTTCATGGACTCCAC GTCATCATCGGCTCCACTTTCTTAGCGGTATGTCTTCTCCGACAAATCCAGTACCACTTTACATCTGAAC ACCACTTCGGATTCGAAGCTGCCGCATGATACTGACATTTTGTAGATGTAGTATGACTATTCCTCTACGT CTCTATCTATTGATGAGGATCATAACCTTTCTAGTATTAGCACTCAGTACAAGTGACTTCCAATCATTAA GCCTTGGTTAAAATCCAAGGAAAGGTAATGAATCTAGCTATAACAATCCTAGCAATTGCAATCGCCCTAT CCTGCATCTTAGCAACTGTTGCATTCTGACTGCCTCAAATAAATCCTGACTCCGAAAAACTTTCTCCATA TGAATGCGGCTTTGACCCCCTTGGATCCGCCCGCCTCCCCTTCTCACTACGATTCTTCCTGGTGGCAATC TTATTTCTGTTGTTCGACCTAGAAATTGCATTACTACTCCCCCTACCCTGAGGAGACCAACTAGCCTCCC CCACCACCGCCCTATTATGAGCAATAGCCATCTTAGTCCTACTAACCCTAGGTCTCATCTATGAATGAAC CCAAGGAGGACTTGAATGGGCTGAATAGACGACTAGTCCAAAGTAAGACCGCTGATTTCGGCTCAACTAA TTATGGTGCAAGTCCATAGTCGTCTTATGACCCCAGTACACTTCAGCTTCAGCTCTGCCTTCATACTAGG ACTTATAGGATTGACCTTCCATCGAACCCACCTTCTCTCTGCCCTCCTCTGCCTAGAAGGAATAATATTA TCCCTATTTATTGCCCTCTCCCTCTGGTCCCTCCAATTAGAATCAACCACCCATGCCACCGCCCCCATAC TCCTACTTGCATTTTCGGCATGCGAAGCCGGAGCAGGCCTGGCCCTCCTCGTTGCCGCCACGCGAACGCA CGGCACAGATCACCTCCAAAACCTAAACCTACTACAATGCTAAAAATCTTAATCCCGACATTAATGCTAT TCCCCACAACATGACTTGCAACACCAAAATGACTATGAGCCACAACAACAGCCCAAGCCTTAATCATTGC CACCGCAAGCCTAACCCTACTCAACTGGAGCTCAGAAACTGGCTGAACTTCCACTAACCCCTACCTAGGC ACGGATCCACTCTCCACCCCCCTACTAGTCCTAACATGCTGACTACTACCCCTAATGATTCTAGCAAGCC AAAACCACATTTCTCCAGAGCCCGTTAGTCGTCAACGAACCTACATCACCCTTCTAGTGTCTCTCCAACT ATTCTTAATTATAGCCTTCGGGGCCACCGAAATCATCTTATTCTACATCATATTTGAAACCACACTAATC CCCACCCTGATTATTATCACACGATGAGGAAACCAAACCGAACGTCTCAACGCAGGCACCTACTTCCTAT TCTACACACTAGCCGGGTCCCTCCCCCTACTAGTTGCCCTACTGATCCTACAAAAAGAAATAGGCTCCCT ATCAATACTAATTATCCAATACATACAACCTGCCCCCCTATGCACCTGAGCCGATAAAATCTGATGAGCA GCCTGCTTAATTGCCTTCCTAGTAAAAATACCCCTCTACGGAGTCCACCTCTGATTACCAAAAGCACACG TAGAAGCCCCAGTTGCAGGATCTATAGTCCTAGCTGCCGTACTACTAAAACTAGGCGGTTATGGCATGAT ACGAATGATTATTATACTAGAGCCTGCATCCAAAAACCTTGCATACCCATTTATTATCCTGGCCCTATGA GGCATTATCATGACCGGATCAATTTGTCTACGACAGACAGATCTAAAATCCCTAATTGCTTACTCTTCAG TAAGCCACATGGGACTAGTAGTAGCGGGAATCCTCATCCAAACCCCCTGAGGCTTCACCGGAGCTATCAT TTTAATGATCGCACACGGATTAGCATCTTCCGCATTATTCTGCCTAGCAAACACCAATTATGAGCGCCTC CACAGTCGAACCCTGCTTCTCGCACGAGGAATACAAGCCATCCTCCCCCTGATAGCTGCATGATGATTCA TCGCCAACCTGGCCAACTTAGCCCTCCCTCCCCTCCCCAACCTTATAGGAGAACTAATTATCATCACCTC AATATTCAACTGATCAAGCTGAACAATTATCCTTACAGGGACCGGAACCCTTATCACCGCCAGCTATTCT CTCTATATGTATCTAATAACACAACGAGGCCCTGTAACCACCTTAATCACAGCAATTGAACCATCCCACA CACGAGAACACCTACTCATGGCGCTACACCTAATCCCCATCATCATACTGACACTAAAACCAGAGCTCAT GTGAGGTTGATGCTTCTGTAAACATAGTTTAAACAAAATATTAGATTGTGGTTCTAAAGATGGGAGCTAA ACCCTCCTTGTTCACCGAGAGAAGCCAGGGGCACTAAGAACTGCTAATTCTTCAGCACCATGGTTCAAAT CCATGGGTCACTCGGCTTCTAAAGGATAATAGCTCATCCGTTGGTCTTAGGAACCAAAAACTCTTGGTGC AACTCCAAGTAGAAGCTATGCATCCACCAACACTTATCTTTAACTCAACCCTCCTCATTATTCTTTTCCT CCTAACGTACCCCCTCATCGTCTCCCTCAATCCCAGCCCTCTTAACAAAAAATGAGCGACCACCCATGTT AAAACCGCAGTTCAAACGGCCTTCTACATCAGCCTGCTCCCCCTCGCAATATTCTTTGATCAAGGCATAG AAACCATCACCACCAACTGACACTGAATAAACATCGCCACCTTCAACATCAACGTCAGCTTCAAATTTGA CCAATACTCAATTATTTTTACACCCGTCGCCCTCTACGTTACATGATCAATCCTAGAATTCGCTTCATGA TACATACACTCAGACCCCAACATAAACCGATTCTTTAAATACCTACTCTTATTCTTAATCGCCATAATTA CCCTAGTCACAGCTAACAATATATTCCAACTATTCATCGGCTGAGAAGGAGTAGGCATTATGTCCTTCCT GCTAATCGGATGATGATACGGACGTGCAGACGCCAACACTGCCGCCTTACAAGCCGTCATCTACAACCGA GTAGGAGACATTGGACTAATCCTAAGCATGGCATGATTTGCAATAAACATAAACACTTGAGAAATCCAAC AAATATTCGCCTCCTCCCAAGACAACCCGGCAACCCTGCCACTCATAGGCCTAATCCTTGCCGCCACAGG AAAATCAGCTCAATTCGGCCTCCACCCCTGACTCCCTTCAGCAATAGAAGGCCCCACACCGGTCTCTGCC TTACTACACTCCAGCACTATGGTTGTAGCCGGCATTTTCCTACTAATCCGACTTCACCCCTTAATAGAAC ACAACCAACTTGCGCTAACCACCTGCCTGTGCTTGGGAGCCACCACCACCCTATTCACCGCCGCCTGTGC CCTCACTCAAAATGACATCAAAAAAATCGTAGCATTTTCTACATCCAGCCAACTAGGCTTAATGATAGTC ACCATCGGCTTAAACCAACCCCAATTAGCTTTCCTACACATTTGTACCCACGCATTCTTTAAAGCAATAC TATTCCTATGCTCCGGATCCATTATTCACAGCCTAAACGACGAACAAGACATCCGAAAAATAGGAGGCCT CCACACCATACTTCCATTCACCTCAACCTGCCTCACCATTGGCAGCCTAGCTCTCACCGGAATACCATTC CTCTCAGGATTCTTCTCAAAAGACGCTATTATTGAAGCTCTTAACACATCTCACCTAAACGCCTGAGCCC TTACCCTGACCCTTATTGCCACCTCCTTCACAGCCGTGTACAGCTTCCGAGTCATCTTCTTCGCCTCCAT AGGATCCCCCCGATTCCTACCCCTATCCCCCCTCAACGAAAACAACCCAACAGTAATCAACCCAATCAAA CGACTTGCCTGAGGAAGCATCCTCGCCGGACTATTCATTACCTCCAACTTCCTTCCAACAAAAACACCAA TCATAACCATACCCACAACCCTCAAACTATCCGCACTACTGGTGACAACCTTAGGACTTCTCATAGCCCT AGAACTGACAAATCTGACAAACAAACAACTAAAAATCACCCCAACCCTCCCCCTCCACAACTTCTCCAAC ATACTAGGATATTTCCCATCAATCATCCACCGACTAGCCCCAAAAATCAAACTAAACCTAGGACAGACCA TAGCAACCCACCTGATCGACCAAACATGACTAGAAAAAATAGGACCAAAAGGAGTCACAACCAACCAAAT CCCAATGATTAAAGCCACAAACAATATCCAACAAGGCCTAATCAAAACATACTTAACAATTTTCTTCCTG ACCACTGCACTGTCAATTCTCCTCATTACACTAATTTAGACAGCCCGAAGAGCCCCCCGACTGAGCCCAC GAGTAAGCTCCAACACCACAAACAACGTTAACAACAAAACCCACCCCGACACTATCAACATAAACCCCCC TAAAGAGTACATAAACGCCACCCCACTAAAATCCCCACGAAGCAACGACAAATCCTTAAACTCATCAACA ACCACCCAAGAACACGAATACCAATCATTACTCACCAAAGTGCCCACAATCAAAACACCCACAACATAAA CCACAACATAAAACAACACCGATCAATCTCCCCATGTCTCAGGATAAGGCTCCGCAGCTAACGCCGCAGA ATAAGCAAACACCACCAACATCCCACCCAGGTAAATTAAAAACAAAATTAATGAAAGAAAAGACCCCCCA TGTCCAACCAAGATACCACACCCAACCGCAGCAGCCACAACCAACCCCAAAGCCGCAAAATAAGGGGCAG GATTTGAAGCCACCCCTACCAAACCCAAAACTAACCCAACTAAAACTAAAAAAGTAAAATAAAACATAAT TTTTACTCGGACTCTAACCAAGACTAATGACTTGAAAAACCACCGTTGTTAATTCAACTATAAAAACCAA TGGCTAACATCCGAAAAACACACCCCCTTCTTAAAATTATTAATGGAGCATTTATTGATCTTCCAGCACC CTCTAACATCTCCGTATGATGAAATTCTGGCTCACTCCTTGGCCTCTGCCTAATCACACAGATTCTAACA GGATTATTTCTCGCAATACACTACACAGCTGACATCTCAACAGCCTTCTCCTCCGTCGCCCACATCTGTC GAGATGTTAACTACGGATGACTAATTCGAAACATTCATGCAAACGGAGCCTCCTTTTTCTTCATCTGCCT CTACCTTCACGTAGCCCGAGGCATATACTATGGCTCATACCTCTACAAAGAAACCTGAAACATCGGAGTA GTTCTCCTACTCCTAACTATAATAACCGCCTTCGTAGGATATGTGCTCCCATGAGGACAGATATCCTTCT GAGGGGCCACCGTAATTACCAACCTTCTTTCCGCCTTCCCCTACATCGGGGACACCCTAGTACAATGAAT CTGAGGTGGTTTCTCAGTAGACAACGCCACCCTAACCCGATTCTTCGCCTTCCACTTCCTTCTGCCATTC GTAATTGCAGGCGCAAGCATAATCCACCTCCTATTCCTTCATCAAACAGGATCAAACAACCCAACAGGAT TAAACTCAGACGCAGACAAAGTACCATTTCACCCATATTTTTCATACAAAGACCTACTCGGATTCATCCT GATACTAATCGGACTCACCGCCATTGCACTCTTTTCCCCAAACCTCTTAGGAGACCCAGACAACTTCACA CCCGCCAACCCCCTCGTCACACCCCCACACATCAAGCCAGAGTGATACTTCCTCTTTGCCTACGCCATCC TCCGATCCATCCCCAACAAACTAGGTGGGGTACTGGCCCTACTTTTCTCCATCCTAGTACTAATACTAGT ACCAATCCTCCACACCTCCAAACAACGAGGAAACACATTCCGACCACTCTCCCAAATCCTCTTCTGAACC CTAGTAGCTGATATGTTAGTACTCACATGAATCGGGGGCCAACCAGTCGAACACCCATTCGTCCTAATCG GACAAGTTGCCTCCACGATCTATTTCGCCCTATTCCTAGTTGCTCTCCCCCTAACCGGTTGACTAGAAAA CAAAATCCTAAACTGAAACTGCCCTAGTAGCTTAGACATCAAAGCACCGGTCTTGTAAACCGAAGACCGA AGGTTAAAATCCTTCCTAGCGCCACTCAGAGAAAAGAGAATTCAACTCTCACCCTTAACTCCCAAAGCTA AGATTCTACATTAAACTATTCTCTGAACAACACATAAAATGTACTATGTTTAATCCACATTAATTTCTAG CCACCATAAATCATTCACTTACTGTATTGAATTTTAAATGCAACAAAAACATAGTATGTTTAATCCACAT TAATTTTTACACAACATTAAAGATAACTTGTATAACCAACAATAACCTACTTTTAAAAACATTAAATAAA AGTAGAACCGACCATCTATATTTCGTTAAAATATAAAGTTAATGAAGATGACGGATAATAATTGCAAGGT ACATAGAATGAACTATTACTGGCTCTGGGTCTATTTCAGTCCATAAATGGTTATTTCCACATAACTGAAC TATGTCTGGCATCTGATTAATGTTATAAGTATTATACAATCCGTGACCCCACATGCCAAGAATCTTGTCA ACATCAGTTATTTTTTTAGGTTACCATTCACGTACATGTAAAAACTCCTCGACATGGAAAAATGGAAGTG GAACATGCTATTTTGTCCTATAAACAGCTGAATGAATGATTTAATGACATAAACATTATTACACTACATT AACCTAATACCACGGATTATACCTTCAACTCTCATACTACACCCTGATACTTCTTAAGCCAATTGTTCTA CATTACACATTTATAACTTTGATGCTTATTCTCGACAAACCCCCTACCCCCTTACATTGAACAAGTTCTT GTACTTTCCTGTCAAACCCCAAAAGCAGGACTAACTCGCATCAACATGTTTTACCATCCCCGACTACATA AATATTTGTATCTATCATTATATTCGTATACATTATTACACAATCACACAAAATAATATATA
Contact: Vadim E. Fraifeld, MD, PhD
Head: Lab for the Biology of Aging, The Shraga Segal Department of Microbiology, Immunology and Genetics, Faculty of Health Sciences, Ben-Gurion University of the Negev
P.O. Box 653, Beer-Sheva 8410501, Israel
Email:
Head: Lab for the Biology of Aging, The Shraga Segal Department of Microbiology, Immunology and Genetics, Faculty of Health Sciences, Ben-Gurion University of the Negev
P.O. Box 653, Beer-Sheva 8410501, Israel
Email:
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If you would like to cite this database please use:
Toren D, Barzilay T, Tacutu R, Lehmann G, Muradian KK, Fraifeld VE. MitoAge: a database for comparative analysis of mitochondrial DNA, with a special focus on animal longevity. Nucleic Acids Res. 2016; 44(D1):D1262-5.
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