Viewing data for Rattus norvegicus


Scientific name Rattus norvegicus
Common name Norway rat
Maximum lifespan 3.80 years (Rattus norvegicus@AnAge)

Total mtDNA (size: 16313 bases) GC AT G C A T
Base content (bases) 6292 10021 4281 2011 4477 5544
Base content per 1 kb (bases) 386 614 262 123 274 340
Base content (%) 38.6% 61.4%
Total protein-coding genes (size: 11333 bases) GC AT G C A T
Base content (bases) 4479 6854 3225 1254 3133 3721
Base content per 1 kb (bases) 395 605 285 111 276 328
Base content (%) 39.5% 60.5%
D-loop (size: 898 bases) GC AT G C A T
Base content (bases) 325 573 215 110 276 297
Base content per 1 kb (bases) 362 638 239 122 307 331
Base content (%) 36.2% 63.8%
Total tRNA-coding genes (size: 1496 bases) GC AT G C A T
Base content (bases) 518 978 298 220 426 552
Base content per 1 kb (bases) 346 654 199 147 285 369
Base content (%) 34.6% 65.4%
Total rRNA-coding genes (size: 2529 bases) GC AT G C A T
Base content (bases) 946 1583 528 418 627 956
Base content per 1 kb (bases) 374 626 209 165 248 378
Base content (%) 37.4% 62.6%
12S rRNA gene (size: 958 bases) GC AT G C A T
Base content (bases) 366 592 204 162 242 350
Base content per 1 kb (bases) 382 618 213 169 253 365
Base content (%) 38.2% 61.8%
16S rRNA gene (size: 1571 bases) GC AT G C A T
Base content (bases) 580 991 324 256 385 606
Base content per 1 kb (bases) 369 631 206 163 245 386
Base content (%) 36.9% 63.1%

ATP6 (size: 681 bases) GC AT G C A T
Base content (bases) 268 413 195 73 192 221
Base content per 1 kb (bases) 394 606 286 107 282 325
Base content (%) 39.4% 60.6%
ATP8 (size: 204 bases) GC AT G C A T
Base content (bases) 74 130 61 13 56 74
Base content per 1 kb (bases) 363 637 299 64 275 363
Base content (%) 36.3% 63.7%
COX1 (size: 1545 bases) GC AT G C A T
Base content (bases) 645 900 397 248 458 442
Base content per 1 kb (bases) 417 583 257 161 296 286
Base content (%) 41.7% 58.3%
COX2 (size: 684 bases) GC AT G C A T
Base content (bases) 270 414 181 89 182 232
Base content per 1 kb (bases) 395 605 265 130 266 339
Base content (%) 39.5% 60.5%
COX3 (size: 784 bases) GC AT G C A T
Base content (bases) 326 458 218 108 224 234
Base content per 1 kb (bases) 416 584 278 138 286 298
Base content (%) 41.6% 58.4%
CYTB (size: 1143 bases) GC AT G C A T
Base content (bases) 484 659 343 141 313 346
Base content per 1 kb (bases) 423 577 300 123 274 303
Base content (%) 42.3% 57.7%
ND1 (size: 955 bases) GC AT G C A T
Base content (bases) 403 552 300 103 257 295
Base content per 1 kb (bases) 422 578 314 108 269 309
Base content (%) 42.2% 57.8%
ND2 (size: 1039 bases) GC AT G C A T
Base content (bases) 403 636 324 79 266 370
Base content per 1 kb (bases) 388 612 312 76 256 356
Base content (%) 38.8% 61.2%
ND3 (size: 348 bases) GC AT G C A T
Base content (bases) 124 224 89 35 108 116
Base content per 1 kb (bases) 356 644 256 101 310 333
Base content (%) 35.6% 64.4%
ND4 (size: 1378 bases) GC AT G C A T
Base content (bases) 521 857 387 134 381 476
Base content per 1 kb (bases) 378 622 281 97 276 345
Base content (%) 37.8% 62.2%
ND4L (size: 297 bases) GC AT G C A T
Base content (bases) 105 192 77 28 97 95
Base content per 1 kb (bases) 354 646 259 94 327 320
Base content (%) 35.4% 64.6%
ND5 (size: 1830 bases) GC AT G C A T
Base content (bases) 686 1144 514 172 519 625
Base content per 1 kb (bases) 375 625 281 94 284 342
Base content (%) 37.5% 62.5%
ND6 (size: 519 bases) GC AT G C A T
Base content (bases) 194 325 156 38 103 222
Base content per 1 kb (bases) 374 626 301 73 198 428
Base content (%) 37.4% 62.6%

ATP6 (size: 681 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 10 (4.42%)
Alanine (Ala, A)
n = 15 (6.64%)
Serine (Ser, S)
n = 15 (6.64%)
Threonine (Thr, T)
n = 21 (9.29%)
Cysteine (Cys, C)
n = 0 (0%)
Valine (Val, V)
n = 10 (4.42%)
Leucine (Leu, L)
n = 41 (18.14%)
Isoleucine (Ile, I)
n = 29 (12.83%)
Methionine (Met, M)
n = 14 (6.19%)
Proline (Pro, P)
n = 14 (6.19%)
Phenylalanine (Phe, F)
n = 13 (5.75%)
Tyrosine (Tyr, Y)
n = 2 (0.88%)
Tryptophan (Trp, W)
n = 3 (1.33%)
Aspartic acid (Asp, D)
n = 2 (0.88%)
Glutamic acid (Glu, E)
n = 4 (1.77%)
Asparagine (Asn, N)
n = 8 (3.54%)
Glutamine (Gln, Q)
n = 6 (2.65%)
Histidine (His, H)
n = 9 (3.98%)
Lysine (Lys, K)
n = 5 (2.21%)
Arginine (Arg, R)
n = 5 (2.21%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
17 12 10 9 0 26 1 5 5 1 1 0 9 0 7 6
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
4 0 0 2 8 5 0 1 3 5 1 1 5 6 2 3
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
9 9 0 3 2 5 0 0 5 1 1 0 0 1 7 4
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
5 4 0 1 1 5 0 0 1 4 0 0 0 1 0 3
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
41 70 82 34
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
23 60 37 107
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
9 65 102 51
ATP8 (size: 204 bases)
Amino acid sequence: MPQLDTSTWFITIISSMATLFILFQLKISSQTFPAPPSPKTMATEKTNNPWESKWTKTYLPLSLPPQ*
Amino acid frequencies:
Glycine (Gly, G)
n = 0 (0%)
Alanine (Ala, A)
n = 3 (4.48%)
Serine (Ser, S)
n = 8 (11.94%)
Threonine (Thr, T)
n = 10 (14.93%)
Cysteine (Cys, C)
n = 0 (0%)
Valine (Val, V)
n = 0 (0%)
Leucine (Leu, L)
n = 7 (10.45%)
Isoleucine (Ile, I)
n = 5 (7.46%)
Methionine (Met, M)
n = 3 (4.48%)
Proline (Pro, P)
n = 9 (13.43%)
Phenylalanine (Phe, F)
n = 4 (5.97%)
Tyrosine (Tyr, Y)
n = 1 (1.49%)
Tryptophan (Trp, W)
n = 3 (4.48%)
Aspartic acid (Asp, D)
n = 1 (1.49%)
Glutamic acid (Glu, E)
n = 2 (2.99%)
Asparagine (Asn, N)
n = 2 (2.99%)
Glutamine (Gln, Q)
n = 4 (5.97%)
Histidine (His, H)
n = 0 (0%)
Lysine (Lys, K)
n = 5 (7.46%)
Arginine (Arg, R)
n = 0 (0%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
3 2 2 1 0 2 0 3 4 0 0 0 0 0 4 0
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
1 0 0 0 2 1 0 0 0 0 0 4 3 2 0 1
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
2 5 2 1 4 3 0 0 0 1 0 0 1 1 1 0
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
0 2 0 0 1 5 0 0 0 0 0 0 0 1 0 3
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
6 16 25 21
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
3 30 16 19
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
4 15 33 16
COX1 (size: 1545 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 46 (8.95%)
Alanine (Ala, A)
n = 43 (8.37%)
Serine (Ser, S)
n = 34 (6.61%)
Threonine (Thr, T)
n = 35 (6.81%)
Cysteine (Cys, C)
n = 1 (0.19%)
Valine (Val, V)
n = 40 (7.78%)
Leucine (Leu, L)
n = 60 (11.67%)
Isoleucine (Ile, I)
n = 36 (7.0%)
Methionine (Met, M)
n = 30 (5.84%)
Proline (Pro, P)
n = 28 (5.45%)
Phenylalanine (Phe, F)
n = 41 (7.98%)
Tyrosine (Tyr, Y)
n = 20 (3.89%)
Tryptophan (Trp, W)
n = 17 (3.31%)
Aspartic acid (Asp, D)
n = 15 (2.92%)
Glutamic acid (Glu, E)
n = 9 (1.75%)
Asparagine (Asn, N)
n = 17 (3.31%)
Glutamine (Gln, Q)
n = 6 (1.17%)
Histidine (His, H)
n = 18 (3.5%)
Lysine (Lys, K)
n = 10 (1.95%)
Arginine (Arg, R)
n = 8 (1.56%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
19 17 26 11 11 22 3 13 4 2 2 7 29 2 15 26
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
4 0 1 12 17 14 0 4 10 24 8 9 8 11 0 8
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
7 19 1 9 11 11 0 1 2 11 9 0 0 8 9 7
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
11 9 0 8 7 10 0 3 0 5 0 0 0 1 0 17
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
153 107 131 124
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
75 137 96 207
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
20 153 215 127
COX2 (size: 684 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 8 (3.52%)
Alanine (Ala, A)
n = 9 (3.96%)
Serine (Ser, S)
n = 18 (7.93%)
Threonine (Thr, T)
n = 17 (7.49%)
Cysteine (Cys, C)
n = 3 (1.32%)
Valine (Val, V)
n = 14 (6.17%)
Leucine (Leu, L)
n = 32 (14.1%)
Isoleucine (Ile, I)
n = 19 (8.37%)
Methionine (Met, M)
n = 14 (6.17%)
Proline (Pro, P)
n = 14 (6.17%)
Phenylalanine (Phe, F)
n = 7 (3.08%)
Tyrosine (Tyr, Y)
n = 10 (4.41%)
Tryptophan (Trp, W)
n = 5 (2.2%)
Aspartic acid (Asp, D)
n = 11 (4.85%)
Glutamic acid (Glu, E)
n = 14 (6.17%)
Asparagine (Asn, N)
n = 9 (3.96%)
Glutamine (Gln, Q)
n = 6 (2.64%)
Histidine (His, H)
n = 6 (2.64%)
Lysine (Lys, K)
n = 5 (2.2%)
Arginine (Arg, R)
n = 6 (2.64%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
13 6 13 7 2 18 1 4 6 0 2 5 6 1 3 4
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
1 0 3 4 4 1 0 2 4 1 1 3 3 8 0 2
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
3 12 0 2 4 8 0 0 4 6 4 0 0 4 5 1
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
5 13 1 1 10 4 1 2 1 2 1 0 0 1 0 5
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
56 60 68 44
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
26 54 62 86
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
7 67 102 52
COX3 (size: 784 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 21 (8.08%)
Alanine (Ala, A)
n = 13 (5.0%)
Serine (Ser, S)
n = 21 (8.08%)
Threonine (Thr, T)
n = 21 (8.08%)
Cysteine (Cys, C)
n = 2 (0.77%)
Valine (Val, V)
n = 15 (5.77%)
Leucine (Leu, L)
n = 36 (13.85%)
Isoleucine (Ile, I)
n = 18 (6.92%)
Methionine (Met, M)
n = 8 (3.08%)
Proline (Pro, P)
n = 10 (3.85%)
Phenylalanine (Phe, F)
n = 21 (8.08%)
Tyrosine (Tyr, Y)
n = 12 (4.62%)
Tryptophan (Trp, W)
n = 12 (4.62%)
Aspartic acid (Asp, D)
n = 4 (1.54%)
Glutamic acid (Glu, E)
n = 7 (2.69%)
Asparagine (Asn, N)
n = 8 (3.08%)
Glutamine (Gln, Q)
n = 7 (2.69%)
Histidine (His, H)
n = 17 (6.54%)
Lysine (Lys, K)
n = 3 (1.15%)
Arginine (Arg, R)
n = 5 (1.92%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
10 8 7 3 6 18 2 7 7 0 3 4 8 0 7 14
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
1 1 1 1 6 6 0 1 9 11 0 3 3 4 0 3
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
6 11 1 2 5 11 0 0 3 5 7 0 0 2 6 9
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
8 6 1 2 2 3 0 1 0 4 0 0 0 0 0 12
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
60 68 61 72
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
43 62 58 98
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
5 88 115 53
CYTB (size: 1143 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 25 (6.58%)
Alanine (Ala, A)
n = 23 (6.05%)
Serine (Ser, S)
n = 24 (6.32%)
Threonine (Thr, T)
n = 25 (6.58%)
Cysteine (Cys, C)
n = 3 (0.79%)
Valine (Val, V)
n = 18 (4.74%)
Leucine (Leu, L)
n = 57 (15.0%)
Isoleucine (Ile, I)
n = 42 (11.05%)
Methionine (Met, M)
n = 12 (3.16%)
Proline (Pro, P)
n = 22 (5.79%)
Phenylalanine (Phe, F)
n = 31 (8.16%)
Tyrosine (Tyr, Y)
n = 15 (3.95%)
Tryptophan (Trp, W)
n = 12 (3.16%)
Aspartic acid (Asp, D)
n = 11 (2.89%)
Glutamic acid (Glu, E)
n = 6 (1.58%)
Asparagine (Asn, N)
n = 17 (4.47%)
Glutamine (Gln, Q)
n = 6 (1.58%)
Histidine (His, H)
n = 13 (3.42%)
Lysine (Lys, K)
n = 10 (2.63%)
Arginine (Arg, R)
n = 8 (2.11%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
14 28 9 4 13 29 1 10 6 0 1 4 12 1 9 22
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
3 0 3 4 10 9 0 2 7 14 2 1 7 14 0 4
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
8 12 1 6 5 11 0 0 2 6 9 0 0 3 14 4
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
9 6 0 1 10 10 0 0 4 4 0 0 0 1 0 12
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
83 96 108 94
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
50 92 79 160
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
8 155 159 59
ND1 (size: 955 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 13 (4.1%)
Alanine (Ala, A)
n = 24 (7.57%)
Serine (Ser, S)
n = 26 (8.2%)
Threonine (Thr, T)
n = 23 (7.26%)
Cysteine (Cys, C)
n = 1 (0.32%)
Valine (Val, V)
n = 10 (3.15%)
Leucine (Leu, L)
n = 56 (17.67%)
Isoleucine (Ile, I)
n = 29 (9.15%)
Methionine (Met, M)
n = 19 (5.99%)
Proline (Pro, P)
n = 22 (6.94%)
Phenylalanine (Phe, F)
n = 20 (6.31%)
Tyrosine (Tyr, Y)
n = 16 (5.05%)
Tryptophan (Trp, W)
n = 9 (2.84%)
Aspartic acid (Asp, D)
n = 3 (0.95%)
Glutamic acid (Glu, E)
n = 12 (3.79%)
Asparagine (Asn, N)
n = 11 (3.47%)
Glutamine (Gln, Q)
n = 6 (1.89%)
Histidine (His, H)
n = 4 (1.26%)
Lysine (Lys, K)
n = 6 (1.89%)
Arginine (Arg, R)
n = 8 (2.52%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
13 16 17 5 8 34 1 8 6 0 1 5 3 1 6 14
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
2 0 1 2 15 7 0 1 7 5 0 2 10 10 0 2
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
8 13 0 1 9 12 0 1 3 3 13 0 0 6 5 1
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
3 11 1 1 2 6 0 1 2 4 1 0 0 0 0 9
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
62 88 92 76
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
35 91 58 134
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
6 121 145 46
ND2 (size: 1039 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 13 (3.77%)
Alanine (Ala, A)
n = 19 (5.51%)
Serine (Ser, S)
n = 29 (8.41%)
Threonine (Thr, T)
n = 39 (11.3%)
Cysteine (Cys, C)
n = 1 (0.29%)
Valine (Val, V)
n = 8 (2.32%)
Leucine (Leu, L)
n = 65 (18.84%)
Isoleucine (Ile, I)
n = 38 (11.01%)
Methionine (Met, M)
n = 23 (6.67%)
Proline (Pro, P)
n = 20 (5.8%)
Phenylalanine (Phe, F)
n = 11 (3.19%)
Tyrosine (Tyr, Y)
n = 11 (3.19%)
Tryptophan (Trp, W)
n = 8 (2.32%)
Aspartic acid (Asp, D)
n = 0 (0%)
Glutamic acid (Glu, E)
n = 4 (1.16%)
Asparagine (Asn, N)
n = 22 (6.38%)
Glutamine (Gln, Q)
n = 13 (3.77%)
Histidine (His, H)
n = 7 (2.03%)
Lysine (Lys, K)
n = 12 (3.48%)
Arginine (Arg, R)
n = 3 (0.87%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
14 24 23 9 18 28 0 9 12 1 2 3 3 0 6 5
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
0 0 1 4 7 8 0 0 1 11 1 3 5 11 1 6
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
16 17 0 2 8 14 0 1 4 4 7 0 1 3 19 1
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
6 3 1 0 0 12 0 0 0 3 0 0 0 0 0 8
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
44 98 139 65
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
30 102 69 145
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
5 124 162 55
ND3 (size: 1039 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 13 (3.77%)
Alanine (Ala, A)
n = 19 (5.51%)
Serine (Ser, S)
n = 29 (8.41%)
Threonine (Thr, T)
n = 39 (11.3%)
Cysteine (Cys, C)
n = 1 (0.29%)
Valine (Val, V)
n = 8 (2.32%)
Leucine (Leu, L)
n = 65 (18.84%)
Isoleucine (Ile, I)
n = 38 (11.01%)
Methionine (Met, M)
n = 23 (6.67%)
Proline (Pro, P)
n = 20 (5.8%)
Phenylalanine (Phe, F)
n = 11 (3.19%)
Tyrosine (Tyr, Y)
n = 11 (3.19%)
Tryptophan (Trp, W)
n = 8 (2.32%)
Aspartic acid (Asp, D)
n = 0 (0%)
Glutamic acid (Glu, E)
n = 4 (1.16%)
Asparagine (Asn, N)
n = 22 (6.38%)
Glutamine (Gln, Q)
n = 13 (3.77%)
Histidine (His, H)
n = 7 (2.03%)
Lysine (Lys, K)
n = 12 (3.48%)
Arginine (Arg, R)
n = 3 (0.87%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
14 24 23 9 18 28 0 9 12 1 2 3 3 0 6 5
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
0 0 1 4 7 8 0 0 1 11 1 3 5 11 1 6
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
16 17 0 2 8 14 0 1 4 4 7 0 1 3 19 1
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
6 3 1 0 0 12 0 0 0 3 0 0 0 0 0 8
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
44 98 139 65
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
30 102 69 145
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
5 124 162 55
ND4 (size: 1378 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 17 (3.71%)
Alanine (Ala, A)
n = 28 (6.11%)
Serine (Ser, S)
n = 42 (9.17%)
Threonine (Thr, T)
n = 39 (8.52%)
Cysteine (Cys, C)
n = 3 (0.66%)
Valine (Val, V)
n = 10 (2.18%)
Leucine (Leu, L)
n = 84 (18.34%)
Isoleucine (Ile, I)
n = 55 (12.01%)
Methionine (Met, M)
n = 38 (8.3%)
Proline (Pro, P)
n = 22 (4.8%)
Phenylalanine (Phe, F)
n = 17 (3.71%)
Tyrosine (Tyr, Y)
n = 13 (2.84%)
Tryptophan (Trp, W)
n = 13 (2.84%)
Aspartic acid (Asp, D)
n = 4 (0.87%)
Glutamic acid (Glu, E)
n = 9 (1.97%)
Asparagine (Asn, N)
n = 21 (4.59%)
Glutamine (Gln, Q)
n = 11 (2.4%)
Histidine (His, H)
n = 11 (2.4%)
Lysine (Lys, K)
n = 13 (2.84%)
Arginine (Arg, R)
n = 9 (1.97%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
28 27 34 3 22 35 1 22 10 1 3 4 2 1 6 11
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
4 1 2 6 9 13 0 1 7 7 2 2 6 14 0 5
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
8 26 0 4 12 14 1 0 11 5 8 0 1 7 14 3
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
8 8 1 2 2 12 1 0 2 7 0 0 0 0 0 13
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
68 114 177 100
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
53 120 82 204
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
13 153 217 76
ND4L (size: 297 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 4 (4.08%)
Alanine (Ala, A)
n = 7 (7.14%)
Serine (Ser, S)
n = 11 (11.22%)
Threonine (Thr, T)
n = 12 (12.24%)
Cysteine (Cys, C)
n = 3 (3.06%)
Valine (Val, V)
n = 5 (5.1%)
Leucine (Leu, L)
n = 19 (19.39%)
Isoleucine (Ile, I)
n = 5 (5.1%)
Methionine (Met, M)
n = 9 (9.18%)
Proline (Pro, P)
n = 1 (1.02%)
Phenylalanine (Phe, F)
n = 6 (6.12%)
Tyrosine (Tyr, Y)
n = 2 (2.04%)
Tryptophan (Trp, W)
n = 0 (0%)
Aspartic acid (Asp, D)
n = 1 (1.02%)
Glutamic acid (Glu, E)
n = 2 (2.04%)
Asparagine (Asn, N)
n = 6 (6.12%)
Glutamine (Gln, Q)
n = 2 (2.04%)
Histidine (His, H)
n = 1 (1.02%)
Lysine (Lys, K)
n = 1 (1.02%)
Arginine (Arg, R)
n = 1 (1.02%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
3 2 8 1 3 9 0 6 2 0 1 1 3 0 5 1
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
1 1 2 1 3 3 0 2 0 2 0 0 0 1 0 5
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
2 5 0 3 5 3 0 0 0 0 2 0 0 2 4 0
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
1 2 0 0 1 1 0 0 1 0 0 0 0 1 0 0
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
19 18 33 29
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
8 31 16 44
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
1 28 46 24
ND5 (size: 1830 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 25 (4.11%)
Alanine (Ala, A)
n = 35 (5.75%)
Serine (Ser, S)
n = 56 (9.2%)
Threonine (Thr, T)
n = 55 (9.03%)
Cysteine (Cys, C)
n = 7 (1.15%)
Valine (Val, V)
n = 12 (1.97%)
Leucine (Leu, L)
n = 94 (15.44%)
Isoleucine (Ile, I)
n = 70 (11.49%)
Methionine (Met, M)
n = 39 (6.4%)
Proline (Pro, P)
n = 27 (4.43%)
Phenylalanine (Phe, F)
n = 38 (6.24%)
Tyrosine (Tyr, Y)
n = 16 (2.63%)
Tryptophan (Trp, W)
n = 14 (2.3%)
Aspartic acid (Asp, D)
n = 10 (1.64%)
Glutamic acid (Glu, E)
n = 10 (1.64%)
Asparagine (Asn, N)
n = 38 (6.24%)
Glutamine (Gln, Q)
n = 16 (2.63%)
Histidine (His, H)
n = 14 (2.3%)
Lysine (Lys, K)
n = 24 (3.94%)
Arginine (Arg, R)
n = 9 (1.48%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
36 34 38 12 19 45 0 17 16 0 1 5 4 2 6 32
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
1 4 3 8 16 10 1 2 6 13 4 5 7 14 1 13
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
17 24 1 7 12 26 0 3 8 7 9 0 1 14 24 5
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
9 9 1 3 7 22 2 1 2 6 0 0 0 1 0 14
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
92 142 237 139
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
66 162 129 253
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
14 210 259 127
ND6 (size: 519 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 23 (13.37%)
Alanine (Ala, A)
n = 8 (4.65%)
Serine (Ser, S)
n = 10 (5.81%)
Threonine (Thr, T)
n = 8 (4.65%)
Cysteine (Cys, C)
n = 4 (2.33%)
Valine (Val, V)
n = 15 (8.72%)
Leucine (Leu, L)
n = 26 (15.12%)
Isoleucine (Ile, I)
n = 14 (8.14%)
Methionine (Met, M)
n = 11 (6.4%)
Proline (Pro, P)
n = 3 (1.74%)
Phenylalanine (Phe, F)
n = 16 (9.3%)
Tyrosine (Tyr, Y)
n = 8 (4.65%)
Tryptophan (Trp, W)
n = 5 (2.91%)
Aspartic acid (Asp, D)
n = 6 (3.49%)
Glutamic acid (Glu, E)
n = 8 (4.65%)
Asparagine (Asn, N)
n = 4 (2.33%)
Glutamine (Gln, Q)
n = 0 (0%)
Histidine (His, H)
n = 0 (0%)
Lysine (Lys, K)
n = 2 (1.16%)
Arginine (Arg, R)
n = 1 (0.58%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
13 1 3 2 0 2 1 10 0 0 8 0 3 4 15 1
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
8 3 1 5 0 0 3 4 1 2 16 2 0 0 1 6
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
0 2 0 1 0 2 1 6 0 6 2 2 11 4 0 0
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
0 1 7 6 0 0 2 0 0 0 1 0 0 1 0 3
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
60 9 45 59
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
39 23 29 82
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
57 6 29 81
Total protein-coding genes (size: 11407 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 208 (5.47%)
Alanine (Ala, A)
n = 236 (6.21%)
Serine (Ser, S)
n = 301 (7.92%)
Threonine (Thr, T)
n = 318 (8.37%)
Cysteine (Cys, C)
n = 29 (0.76%)
Valine (Val, V)
n = 159 (4.18%)
Leucine (Leu, L)
n = 597 (15.71%)
Isoleucine (Ile, I)
n = 374 (9.84%)
Methionine (Met, M)
n = 224 (5.89%)
Proline (Pro, P)
n = 198 (5.21%)
Phenylalanine (Phe, F)
n = 234 (6.16%)
Tyrosine (Tyr, Y)
n = 129 (3.39%)
Tryptophan (Trp, W)
n = 105 (2.76%)
Aspartic acid (Asp, D)
n = 70 (1.84%)
Glutamic acid (Glu, E)
n = 93 (2.45%)
Asparagine (Asn, N)
n = 168 (4.42%)
Glutamine (Gln, Q)
n = 86 (2.26%)
Histidine (His, H)
n = 100 (2.63%)
Lysine (Lys, K)
n = 99 (2.61%)
Arginine (Arg, R)
n = 64 (1.68%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
192 182 194 70 105 276 11 119 81 5 25 39 83 12 94 140
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
30 11 18 50 100 81 5 20 57 96 35 37 58 98 5 62
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
88 162 6 43 78 122 2 13 43 56 73 2 16 56 112 35
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
65 80 13 25 45 93 6 8 14 39 3 0 0 9 0 103
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
766 910 1239 886
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
462 997 754 1588
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
151 1217 1636 797

>NC_001665.2 Rattus norvegicus strain BN/SsNHsdMCW mitochondrion, complete genome
GTTAATGTAGCTTATAATAAAGCAAAGCACTGAAAATGCTTAGATGGATTCAAAAATCCCATAAACACAA
AGGTTTGGTCCTGGCCTTATAATTAATTGGAGGTAAGATTACACATGCAAACATCCATAAACCGGTGTAA
AATCCCTTAAACATTTGCCTAAAACTTAAGGAGAGGGCATCAAGCACATAATATAGCTCAAGACGCCTTG
CCTAGCCACACCCCCACGGGACTCAGCAGTGATAAATATTAAGCAATGAACGAAAGTTTGACTAAGCTAT
ACCTCTCAGGGTTGGTAAATTTCGTGCCAGCCACCGCGGTCATACGATTAACCCAAACTAATTATTTTCG
GCGTAAAACGTGCCAACTATAAATCTCATAATAGAATTAAAATCCAACTTATATGTGAAAATTCATTGTT
AGGACCTAAGCCCAATAACGAAAGTAATTCTAATCATTTATATAATGCACGATAGCTAAGACCCAAACTG
GGATTAGATACCCCACTATGCTTAGCCCTAAACCTTAATAATTAAACCTACAAAATTATTTGCCAGAGAA
CTACTAGCTACAGCTTAAAACTCAAAGGACTTGGCGGTACTTTATATCCATCTAGAGGAGCCTGTTCTAT
AATCGATAAACCCCGTTATACCTTACCCCTTCTCGCTAATTCAGCCTATATACCGCCATCTTCAGCAAAC
CCTAAAAAGGCACTAAAGTAAGCACAAGAACAAACATAAAAACGTTAGGTCAAGGTGTAGCCAATGAAGC
GGAAAGAAATGGGCTACATTTTCTTTTCCCAGAGAACATTACGAAACCCTTTATGAAACTAAAGGACAAA
GGAGGATTTAGTAGTAAATTAAGAATAGAGAGCTTAATTGAATAGAGCAATGAAGTACGCACACACCGCC
CGTCACCCTCCTCAAATTAGATTGGCATTCATATATACATAATTTCACTAACAAATTTATGAGAGGAGAT
AAGTCGTAACAAGGTAAGCATACTGGAAAGTGTGCTTGGAATAATCACAGTGTAGCTTAATCACAAAGCA
TCTGGCCTACACCCAGAAGAATTCATAAAAATGAACACTTTGAACTAATCCTAGCCCTACAACCAACCAA
CATAACTAAACCCCCCACATAAACTAAAACATTTAACTCAAAAAGTATTGGAGAAAGAAATTTACTTACC
AGGAGCTATAGAGAAAGTACCGCAAGGGAATGGTGAAAGACTAATTTAAAGTAAAAATAAGCAAAGATTA
AACCTTGTACCTTTTGCATAATGAATTAACTAGAAAATCCTTAACAAAAAGAATTTAAGCTAAGAACCCC
GAAACCAAACGAGCTACCTAAAAACAATTTCATGAATCAACCCGTCTATGTAGCAAAATAGTGGGAAGAT
TTTTAGGTAGAGGTGAAAAGCCTATCGAGCTTGGTGATAGCTGGTTGCCCAAAAAAGAATTTCAGTTCAA
CTTTAAGCTTACCATCAGAACAACAAATCAAAATGTAAACTTAAAATATAGCCAAAAGAGGGACAGCTCT
TTAGGAAAAGGAAAAAACCTTAAATAGTGAATAAACAACTACAATCACTTAACCATTGTAGGCTTAAAAG
CAGCCATCAATAAAGAAAGCGTTCAAGCTCAACATACATACTTACACACACTAATTCCACAAACCTCAAT
AAATTCCTATATCACAAATTGGGCTAATCTATAGATCCATAGATGAAATACTGTTAATATGAGTAACAAG
AACCAATTCTCCTAGCACAAGTGTATGACAACCCGGATAACCATTGTCAATTATCGAATCATAGGTACTA
ACCCAACAATAAAATTACCTATCCCTAACTCGTTAGCCCAACACAGGCGTGCTTTAAGGAAAGATTAAAA
AAAGTAAAAGGAACTCGGCAAACACGAGCCCCGCCTGTTTACCAAAAACATCACCTCTAGCATAACAAGT
ATTAGAGGCATTGCCTGCCCAGTGACTAAAGTTAAACGGCCGCGGTATCCTGACCGTGCAAAGGTAGCAT
AATCACTTGTTCCTTAATTAGGGACTAGAATGAATGGCTAAACGAGGGTTCAACTGTCTCTTACTTTCAA
TCAGTGAAATTGACCTTCCAGTGAAGAGGCTGGAATCTCCCAATAAGACGAGAAGACCCTATGGAGCTTC
AATTTACTAGTTCAACTTATATAAAAACAACCTAATGGGCTAAAACAAAATAAATATGAACTAAAAAATT
TCGGTTGGGGTGACCTCGGAGAATAAAAAATCCTCCGAATGATTTTAACCTAGACTCACAAGTCAAAGTA
ATACTAATATCTTATTGACCCAATTATTGATCAACGGACCAAGTTACCCTAGGGATAACAGCGCAATCCT
ATTTAAGAGTTCATATCGACAATTAGGGTTTACGACCTCGATGTTGGATCAGGACATCCCAATGGTGCAG
AAGCTATTAATGGTTCGTTTGTTCAACGATTAAAGTCCTACGTGATCTGAGTTCAGACCGGAGCAATCCA
GGTCGGTTTCTATCTATTTACAATTTCTCCCAGTACGAAAGGACAAGAGAAATGGAGCCTCCTTACCATA
AGTGCTCCCAACCAATTTATGAAAAAAATCTCAATAAAGTATATATGTACAATAAATTAAACCTAGCCCA
GGTTATTAGGGTGGCAGAGCCAGGTAATTGCGTAAGACTTAAAACCTTGTTCCCAGAGGTTCAAATCCTC
TCCCTAATAGTGTACTTTATTAATATCCTAACACTCCTAATCCCAATCTTAATTGCCATGGCCTTCCTCA
CCCTAGTAGAACGGAAAATCCTAGGCTACATACAACTACGCAAAGGCCCCAACATCGTAGGCCCATATGG
TATTCTACAACCATTTGCAGATGCCATAAAACTATTCATAAAAGAACCCATACGCCCCCTAACCACCTCA
ATATCACTATTTATTATCGCCCCAACCCTCTCCCTTACACTAGCTCTAAGCCTATGAATCCCCTTACCAA
TACCTCACCCCCTTATCAACCTCAACCTAGGCATACTATTTATTCTAGCCACATCAAGTCTTTCAGTCTA
CTCCATTCTATGATCAGGATGAGCATCAAATTCAAAATACTCCCTATTCGGAGCCCTACGAGCCGTTGCC
CAAACCATCTCTTACGAAGTCACAATAGCCATTATCCTCTTATCCGTCCTCCTAATAAGCGGCTCCTTCT
CCCTACAAATACTTATCACTACACAAGAACATATCTGACTATTAATCCCCGCCTGACCAATAGCCATAAT
ATGATACATTTCAACCCTAGCAGAAACAAATCGAGCTCCCTTCGACTTAACAGAAGGAGAATCAGAATTA
GTCTCAGGCTTTAACGTCGAATACGCCGCAGGACCATTCGCCCTATTCTTCATAGCCGAGTACACCAATA
TTATCCTAATAAACGCCCTAACATCAATTGTATTCCTAGGCCCCTTATATCACATCAATTACCCTGAATT
ATACTCAACCAGCTTCATAACAGAAACACTACTTCTATCCACAACTTTCCTATGAATCCGAGCATCCTAC
CCCCGTTTTCGATATGACCAACTAATGCACCTCCTATGAAAAAATTTCCTCCCACTAACACTAGCATTCT
GCATATGATACATTTCCCTGCCAATTTTCCTAGCAGGAATTCCACCCTACACATAGAAATATGTCTGACA
AAAGAGTTACTTTGATAGAGTAAATAATAGAGGTTTAAATCCTCTTATTTCTAGGACAATAGGAATTGAA
CCTACACCTAAGAATTCAAAATTCTCCGTGCTACCAATACACCCTATCCTACATAGTAAGGTCAGCTAAC
TAAGCTATCGGGCCCATACCCCGAAAATGTTGGTCTAAACCCTTCCCGTACTAATAAACCCAATCACCCT
AATCATTATTTACTTTACTATCCTCATAGGGCCTGTAATCACTATATCTAGCTCCAACTTACTCCTAATA
TGAGTAGGATTGGAAATAAGCCTTTTAGCTATCATCCCACTTCTAGCCAACAAAAAAAGCCCACGATCAA
CTGAAGCAGCAACAAAATATTTTCTAACCCAAGCTACAGCCTCAATAATTATCCTACTAGTCATCATCCT
CAACTACAAACAATCAGGAATATGAACCCTCCAACAACAAACCAATAACATACTACTCAACATAATACTC
ATTTCACTAGCCATAAAACTTGGACTAGCCCCCTTCCACTACTGACTACCCGAAGTCACCCAAGGAATTC
CCCTACACATTGGATTAATCTTACTAACATGACAAAAAATTGCTCCACTATCAATTCTATACCAATTTTA
TCAACTCCTAAACCCAACTATCACCACCATTCTCGCAATTTCATCAGTCTTTGTTGGCGCCTGAGGAGGA
CTTAACCAGACCCAAACACGAAAAATCATAGCATATTCATCAATTGCCCACATAGGATGAATAACAGCAA
TCCTTCCATACAACCCTAACTTAACCCTCCTAAACTTAACAATTTACATCCTACTTACTGTTCCAATATT
CATCACACTCATAACAAACTCAGCAACAACAATCAACACACTCTCACTCGCATGAAATAAAACTCCCATA
ATCCTAACCATAACATCCATCATCCTCCTATCACTAGGAGGACTCCCCCCTCTCACAGGATTTTTACCAA
AATGAGCAATTATCTCCGAGCTTCTAAAAAACAACTGCTCAACCCTATCAACACTAATAGCTATCATAGC
CCTATTAAGCCTATTCTTCTATACACGACTAATTTACTCTATATCCCTCACCATATTCCCAACCAACAAC
AACTCCAAAATAATCTCCCACCACCACCAAAACCCAAAACATAATTTTATCCTCCCAACCCTCACAGTAT
TAAGTACCCTTACCCTACCGCTTTCCTCCCAACTAATCACATAGAAGTTTAGGATATACAGTCCAAGAGC
CTTCAAAGCCCTTAGAAAACAAACAAGTTTAACTTCTGATAAGGACTGTAAGACTATATCTTACATCTGT
TAAATGCAAATCAACTGCTTTAATTAAGCTAAATCCTCAACTAGATTGGAAGGATTCAAACCTACGAAAA
TTTAGTTAACAGCTAAATACCCTACTTACTGGCTTCAATCTACTTCTCCCGCCTATCAGAAAAAGAGGCG
GGAGAAGCCTTAGTAGAGGAGATTCTCTACACCTTCGAATTTGCAATTCGACATGATAATCACCTTAAGG
CTTTTTGGTAAAAAGGGGGCTCAACCCCTGTCTTTAGATTTACAGTCTAATGCTTACTCAGCCATTTTAC
CTATGCTCGTAAACCGTTGACTCTTTTCAACTAACCACAAAGATATCGGAACCCTCTACCTATTATTTGG
AGCCTGAGCAGGAATAGTAGGGACAGCTTTAAGTATTCTAATTCGAGCTGAACTAGGACAGCCAGGCGCA
CTCCTAGGAGATGACCAAATCTATAATGTCATCGTCACAGCCCATGCATTCGTAATAATTTTCTTTATAG
TAATACCTATAATAATTGGAGGCTTCGGGAACTGACTTGTACCACTAATAATTGGAGCCCCTGATATAGC
ATTCCCACGAATAAATAACATAAGCTTTTGACTGCTTCCTCCATCATTTCTACTCCTTTTAGCATCCTCC
ATAGTAGAAGCTGGAGCTGGAACAGGATGAACAGTATATCCCCCCTTAGCCGGAAACCTAGCCCATGCTG
GAGCATCCGTAGATTTAACTATTTTTTCCCTCCACCTAGCCGGGGTGTCTTCTATCTTAGGAGCTATCAA
CTTTATCACCACTATCATTAATATAAAACCCCCTGCTATAACCCAATATCAGACACCTCTCTTTGTATGA
TCCGTACTAATTACAGCCGTCCTACTACTTCTCTCACTGCCAGTATTAGCAGCAGGTATCACTATACTCC
TTACAGACCGAAATCTAAATACTACTTTCTTCGACCCCGCTGGAGGTGGAGACCCAATCCTTTATCAACA
CCTATTCTGATTCTTCGGCCACCCAGAAGTGTACATCTTAATTCTTCCAGGGTTTGGAATTATTTCACAT
GTAGTTACCTATTACTCTGGAAAAAAAGAACCCTTCGGATATATAGGTATGGTATGAGCCATAATATCTA
TTGGCTTCCTAGGATTTATTGTATGAGCACATCACATATTCACAGTAGGCCTAGATGTAGACACCCGAGC
CTACTTTACATCTGCCACTATAATTATCGCAATTCCTACAGGCGTAAAAGTATTCAGCTGACTCGCTACA
CTACATGGAGGAAATATCAAATGATCCCCCGCCATATTATGAGCCTTAGGGTTTATCTTCTTATTCACAG
TAGGGGGCCTAACAGGGATCGTACTATCTAACTCATCCCTTGACATTGTACTTCATGATACATACTATGT
AGTAGCTCACTTCCACTATGTCTTATCTATAGGAGCAGTATTCGCCATCATAGCTGGCTTCGTCCACTGA
TTCCCACTATTCTCAGGCTATACCCTAAATGACACATGAGCAAAAGCCCACTTTGCCATTATATTTGTAG
GTGTAAACATAACATTCTTTCCTCAACACTTCCTAGGATTAGCAGGGATACCTCGTCGTTACTCTGATTA
TCCAGATGCTTACACCACATGAAATACAGTCTCCTCTATAGGCTCATTCATCTCACTTACGGCCGTCCTT
GTAATGATCTTCATGATTTGAGAAGCCTTCGCATCAAAACGAGAAGTACTCTCAATTTCCTACTCCTCAA
CTAACCTAGAATGACTGCATGGATGCCCCCCACCCTACCACACATTCGAAGAACCTTCCTATGTAAAAGT
TAAATAAGAAAGGAAGGATTCGAACCCCCTACAACTGGTTTCAAGCCAATTTCATAACCATTATGTCTTT
CTCAATGAGATATTAGTAAAATAATTACATAACCTTGTCAAGGTTAAGTTATAGACTTAAATCTATATAT
CTTACATGGCTTACCCATTTCAACTTGGCTTACAAGACGCCACATCACCTATCATAGAAGAACTTACAAA
CTTTCATGACCACACCCTAATAATTGTATTCCTCATCAGCTCCCTAGTACTTTATATTATTTCACTAATA
CTAACAACAAAACTAACACACACAAGCACAATAGACGCCCAAGAAGTAGAAACAATTTGAACAATTCTCC
CAGCTGTCATTCTTATTCTAATTGCCCTTCCCTCCCTACGAATTCTATACATAATAGACGAGATTAATAA
CCCAGTTCTAACAGTAAAGACTATAGGACACCAATGATACTGAAGCTATGAATATACTGACTATGAAGAC
CTATGCTTTGACTCCTACATAATCCCAACCAATGACCTAAAACCAGGTGAACTTCGTCTATTAGAAGTTG
ATAATCGGGTAGTCTTACCAATAGAACTTCCAATCCGTATACTAATCTCATCCGAAGACGTCCTGCACTC
ATGAGCCGTCCCTTCACTAGGGTTAAAAACCGACGCAATCCCCGGCCGCCTAAACCAAGCTACAGTGACA
TCAAACCGACCAGGTCTATTCTATGGCCAATGCTCTGAAATTTGCGGCTCAAATCACAGCTTCATACCCA
TTGTACTAGAAATAGTCCCTCTAAAATATTTCGAAAACTGATCAGCTTCTATAATTTAAACTCATTGCGA
AGCTTAGAGCGTTAACCTTTTAAGTTAAAGTTAGAGACAACAAATCTCCACAATGACATGCCACAACTAG
ACACATCCACATGATTTATTACAATCATCTCCTCAATAGCCACACTATTTATTTTATTTCAATTAAAAAT
TTCTTCCCAAACCTTTCCTGCACCTCCCTCCCCCAAAACTATAGCCACAGAAAAAACGAATAACCCTTGA
GAATCAAAATGAACGAAAACCTATTTGCCTCTTTCATTACCCCCACAATAATAGGTCTACCAATTGTTGT
AACCATTATTATGTTCCCATCAATTCTATTCCCATCATCAGAACGCCTAATCAGCAACCGACTACACTCA
TTTCAACACTGACTAATCAAACTTATCATCAAACAAATAATGTTAATCCACACACCAAAAGGACGAACCT
GAGCCCTAATAATTGTATCCCTAATTATATTTATTGGCTCAACCAACCTTCTAGGGCTTCTTCCCCATAC
ATTTACCCCTACCACTCAGCTATCTATAAACCTAAGCATAGCCATCCCCCTATGAGCAGGAGCCGTAATT
CTAGGCTTCCGACACAAACTAAAAAATTCTTTAGCCCACTTCTTACCGCAAGGAACCCCCATCTCCCTAA
TTCCCATACTAATTATCATCGAAACTATCAGCCTATTTATTCAACCGATAGCACTAGCAGTACGACTAAC
AGCAAACATTACAGCAGGCCATCTATTAATGCATCTAATCGGAGGAGCTACTCTAGTACTTATAGACATC
AGCCCACCAACCGCTACAATTACATTTATTATTCTACTTCTACTTACAGTACTTGAATTTGCCGTAGCCT
TAATTCAAGCCTATGTATTCACCCTTCTAGTAAGCCTGTACCTACATGATAACACATAATGACCCACCAA
ACCCATGCATACCATATAGTAAACCCAAGCCCATGACCACTAACAGGAGCCCTATCAGCTCTTCTACTTA
CATCCGGCTTAGTAATATGATTCCATTACAACTCCACAATTCTCCTATCATTAGGCCTCCTGACAAACAT
CCTAACTATATATCAATGATGACGAGATATCATCCGTGAAGGAACATACCAAGGCCACCACACCCCTATT
GTACAAAAAGGCCTCCGATACGGAATAATCCTGTTTATTGTCTCCGAAGTATTCTTCTTTGCCGGATTTT
TCTGAGCATTTTATCATTCCAGCCTAGTTCCTACCCACGACCTAGGCGGTTGCTGACCCCCAACAGGAAT
TACCCCTTTAAATCCCCTAGAAGTACCCCTTCTAAATACATCAGTCCTCTTAGCATCAGGAGTCTCAATT
ACATGAGCCCATCACAGCCTAATAGAAGGCAACCGAAACCATATAAACCAAGCCCTACTAATCACCATTC
TCTTAGGATTATATTTCACTATCTTACAAGCCTCAGAGTATTTCGAAACATCATTTTCTATCTCAGACGG
AATTTACGGCTCAACATTCTTCATAGCAACGGGATTTCATGGCCTCCACGTAATTATTGGCTCAACTTTC
CTAATTGTCTGTCTACTACGACAACTAAAATTCCACTTCACATCAAAACATCATTTCGGATTTGAAGCCG
CAGCATGATACTGACACTTCGTAGATGTAGTTTGACTATTCCTATACGTTTCTATCTATTGATGAGGATC
CTACTCCCTTAGTATAAACAATACAACTGACTTCCAATCAGTTAATTCTGAAAAAACTCAGAAGAGAGTA
ATTAACCTACTTATTATCATCACAATTAACATCACCTTATCTTTTATCCTCATTTCAATTGCATTCTGAT
TGCCTCAAATAAACTTATACTCCGAAAAAGCAAACCCATATGAATGTGGCTTCGACCCAACAAGTTCTGC
ACGCCTTCCTTTTTCAATAAAATTTTTCTTAGTAGCCATTACATTTCTACTATTCGACCTAGAAATCGCC
TTACTACTCCCCCTCCCATGAGCGATTCAAACAACCAATACTACTACAATAATAGCAACTGCCTTTATTC
TAGTCACTATTTTAGCTCTTGGCCTAAGCTACGAATGAACACAAAAAGGACTAGAATGAACAGAATAATT
GGTAATTAGTTTAAATAAAATTAATGATTTCGACTCATTAGATTATGATAATAATCATAATTACCAACAA
TGACATCTGCTTTCCTAAATTTAACTATAGCCTTTACATTATCTCTACTAGGTACTTTTATATTTCGCTC
CCACTTAATATCTACTCTCCTCTGCCTAGAAGGAATAATACTATCACTATTTGTCATAACTTCAACATCC
ACATTAAACTCCAACTCCATAATCTCCATAACCATCCCAATTACCATTCTAGTTTTTGCAGCCTGCGAAG
CAGCAGTAGGTTTAGCCTTACTAGTAAAAATTTCAAATACTTACGGAACAGACTACGTACAAAACCTCAA
CCTTCTACAATGTTAAAAATTATTTTCCCATCTATCATACTCCTCCCACTAACATGACTCTCAGCCAACA
AAAAAATCTGAACCAATGTCACCTCCTACAGCTTTCTAGTGAGCCTATTAAGCTTATCACTCCTATGACA
AAATGACGAAAATTACCTAAATTTCTCAGTTATATTCTCCTCCGATCCATTATCCACCCCACTAATCATT
CTAACAACTTGACTCCTCCCACTAATAATGCTCGCTAGCCAAAATCACATAAAAAAAGAAAATATAATGC
ATCAAAAACTTTACATCTCAATACTTATTAGCCTCCAAATTTTACTCATCATAACATTCTCCGCAACAGA
ACTAATTTTATTTTATATCCTGTTCGAAGCCACTCTAATCCCAACACTAATTATCATTACACGATGAGGC
AACCAAACAGAACGCTTAAATGCAGGAATTTATTTCCTATTTTATACACTAATTGGCTCCATCCCACTCT
TAATTGCCCTCATTTCAATCCAAAACTCAATAGGAACACTCAACTTCCTAATCCTCTCCCTCACAACACA
CCCCCTACCCTCAACATGATCCAACACCATTCTATGACTAGCATGTATAATAGCATTTATAATCAAAATA
CCATTATACGGAGTCCATCTATGATTACCAAAAGCCCACGTAGAAGCTCCAATTGCAGGCTCTATAATTT
TAGCAGCAATTCTCCTAAAGCTAGGGGGTTATGGGATAATACGAGTTTCCATCATTCTAGACCCCCTAAC
AAAATCTTTAGCCTACCCATTCATCATCCTCTCATTATGAGGCATAATTATAACTAGCTCAATCTGCCTA
CGCCAAACAGATCTAAAATCATTAATTGCTTACTCATCAGTAAGCCATATAGCCCTAGTCATCACAGCCA
TTATAATCCAGACACCATGAAGCTTCATGGGAGCTACAATACTAATAATCGCCCACGGCTTAACCTCCTC
ACTCTTATTCTGCCTAGCAAACACCAACTACGAACGAATTCACAGCCGAACTATAATTATAGCTCGAGGA
TTACAAATAATCTTTCCATTGATAGCAACATGATGACTATTAGCAAGCTTAGCCAACCTAGCACTACCAC
CCCTAATTAACCTCATAGGCGAGTTATTCATTGTTATAGCAACATTTTCCTGATCGAACCCCTCTATCAT
CCTTATAGCAACTAACATTGTCATCACAGGAATCTACTCAATATATATAATTATCACAACCCAACGAGGA
AAACTAACCAGCCACATAAACAACCTCCAACCTTCCCACACACGAGAATTAACACTCATAGCTCTACACA
TTATTCCCCTCATACTATTAACAATCAACCCTAAACTCATCACAGGCCTAACAATATGTAGGTATAGTTT
ACAAAAAACATTAGACTGTGAATCTAACAACAGGAAATCAAATTCCTTATTTACCAAGAAAGTATGCAAG
AACTGCTAATTCATGCACCCATACCTAAAACATATGGCTTTCTTACTTTTATAGGATAGAAGTAATCCAT
TGGTCTTAGGAACCAAAAACCTTGGTGCAACTCCAAATAAAAGTAATAAATATAATAACATCCTCAATCC
TCATAATCTTGATTTTACTTACAACACCAATCATCATTTCCATAACCAACCTACCAAAACTTATTGACTT
TCCGTCATATGCTACTTCATCAATTAAATTCTCATTCCTCCTTAGCCTCTTACCTTTACTACTATTCTTC
CACCACAACACAGAATATATAATTACTAACTGACATTGACTAACTATTAATTCTATTAAACTTACTATAA
GTTTCAAAATTGACTATTTCTCAATCCTATTCCTATCAGTAGCCCTATTCGTAACATGATCAATCATACA
ATTCTCTTCATGATATATACACTCTGATCCCCACATTAACCGATTCATTAAGTACTTAATAATATTCCTA
ATTACTATACTAATTCTAACCTCAGCTAACAATCTATTCCAACTCTTTATTGGATGAGAAGGAGTAGGAA
TTATATCCTTCTTATTAATCGGATGATGATATGGCCGTGCAGACGCCAACACAGCGGCCCTCCAAGCAAT
CCTCTACAACCGAGTCGGAGACATTGGTTTCATCCTAGCTATAACCTGATTCTGCCTAAACATAAACTCC
TGAGAACTCCAACAAATTTTCTTAACCAATACCAACAATCTAGTCCCTCTCACAGGACTACTAATTGCAG
CCACAGGAAAATCCGCCCAATTCGGACTTCATCCATGACTCCCATCAGCTATAGAAGGCCCAACTCCCGT
CTCTGCCCTACTACACTCAAGCACAATAGTTGTGGCAGGGATCTTCCTAATAATCCGATTCCACCCCCTA
ACCTCAAACAATAGTACTATTATAACAGCCATACTATGTCTTGGTGCAATCACCACATTATTCACAGCAA
TCTGTGCTCTCACCCAAAACGACATCAAAAAAATTGTAGCTTTCTCAACATCCAGCCAACTAGGCCTTAT
AATAGTCACATTAGGGATTAACCAACCCTACCTTGCTTTCCTCCACATTTGCACCCATGCATTCTTCAAA
GCCATATTATTCATATGCTCCGGATCAATCATCCATAGCCTCAACGATGAACAAGACATTCGAAAAATAG
GCAATATAATAAAAGCAATACCATTCACATCATCTTGTCTCATTATCGGGAGCCTAGCCCTTACCGGAAT
ACCTTTCCTCACAGGATTCTATTCAAAAGATCTCATCATCGAAGCCATCAACACGTGTAACACCAACGCC
TGAGCCCTAATAATCACTTTAATCGCCACATCCATAACTGCTGTGTACAGTATACGCATCATCTACTTCG
TCACCATGACAAAACCACGATACTCCCCACTAATTACTATTAATGAAAACAACCCAAACCTCATTAATCC
AATCAAACGCCTAGCATTAGGAAGCATCCTAGCAGGCTTCCTTATCTCACTAAATATTCCTCCAACTAAC
ATTCAAATTCTCACAATACCCTGACATTTAAAAATAACAGCCCTACTCATTACAATCCTAGGATTTGCCA
TTGCCCTAGAACTTAACAATTTAACACTAAATCTATCAATAAGCAAACCCACCAAACTATCATCATTCTC
AACCTCCCTAGGCTACTACCCACCAATTATACACCGAATTATTCCTCAAAAAACTCTAAATTCTAGCTAC
AAATTATCCTTAAACCTACTAGACCTAATCTGACTAGAAAAGACAATCCCAAAATCAACCTCAATCACCC
AAACCCAACTATCTAAAATAATATCCAACCAAAAAGGGCTAATCAAACTATATTTCCTATCATTTCTCAT
CACTATTTCACTAATTTTTATCTTACACACACTTAATCCCGAGTGATTTCAATAATAATAAAAATCCCCG
CAAACAATGACCACCCAGCCACCACTATCATTCAAGTAGCACAACTATAAATAGCCGCAACCCCAATCCC
CCCCTCCAACATAACCCCAACATCATCAATCTCATACATTAATCAATCGCCTAGACTATCAAAATCAACT
AACTCCACCTTATTATTCAAACTAAACAAGTAGAACACTACCAACTCCATAAAAAGCCCTAAAACAAAAA
AACTAAAAATAAACCAATTAGACCCTCAAGTCTCCGGGTACTCCTCAGTAGCCATAGCAGTTGTATACCC
AAATACAACCAACATCCCCCCCAAATAAATTAAAAATACTATTAAACCTAAAAACGAACCCCCAAACCCT
AAAACTATTAAGCACCCAATACATCCACTAACAATCAATCCAAGCCCACCATAAATAGGTGAAGGCTTCA
ACGCCAACCCTAGACAACCAGTCAAAAACAGTAAACTTAAAATAAACATATAATTTGTCATTATTTCTAC
ACAGCATTTAACTGTGACTAATGACATGAAAAATCATCGTTGTAATTCAACTATAGAAACATCTAATGAC
AAACATCCGAAAATCTCACCCCCTATTCAAAATCATCAACCACTCCTTTATCGACCTCCCCGCCCCATCT
AACATCTCATCATGATGAAACTTCGGTTCTCTACTAGGAGTATGCCTCATAGTACAAATCCTCACAGGCT
TATTCCTAGCAATACACTACACGTCTGATACCATAACAGCATTTTCATCAGTCACCCACATCTGCCGAGA
CGTAAACTACGGCTGACTAATCCGATACCTACACGCCAACGGCGCCTCAATATTTTTCATCTGCCTATTC
CTCCATGTGGGACGAGGACTATACTATGGATCCTACACTTTCCTAGAAACCTGAAACATTGGGATCATTC
TACTATTTGCAGTCATAGCAACTGCATTCATGGGCTATGTACTCCCATGAGGACAAATATCATTCTGAGG
AGCTACAGTAATTACAAACCTATTATCTGCTATCCCTTACATTGGGACTACCCTAGTCGAATGAATCTGA
GGAGGCTTCTCAGTAGACAAAGCAACCCTAACACGCTTCTTCGCATTCCACTTCATCCTCCCATTCATTA
TCGCCGCCCTTGCAATTGTACATCTTCTTTTCCTCCACGAAACAGGATCAAATAACCCCACAGGATTAAA
CTCCGACGCAGACAAAATCCCATTCCATCCATATTATACAATTAAAGACCTCCTAGGTGTATTTATATTA
CTATTATTCCTAATAACCCTAGTACTATTCTTCCCAGACCTACTAGGAGACCCAGACAATTATACACCCG
CTAACCCCCTCAACACCCCACCCCACATCAAACCAGAATGATATTTTCTCTTTGCCTACGCTATTCTACG
CTCCATTCCCAACAAACTAGGAGGAGTCGTAGCCCTAATCTTATCAATCCTAATCTTAGCCTTCCTACCA
TTCCTGCATACTTCAAAACAACGCAGCTTAACATTCCGCCCAATCACCCAAATCCTTTACTGAATCCTAG
TAGCCAACCTCCTAATCTTAACATGAATCGGAGGCCAACCAGTAGAACACCCATTTATCATTATTGGCCA
ACTAGCCTCCATCAGCTACTTTTCAATTATCCTCATTCTCATACCAATCTCTGGAATTGTTGAAGACAAA
ATGTTAAAATGAAATTAATGTCCCGATAGTATAAAAATTACTCTGGTCTTGTAAACCAAAAATGAAGAGT
CAATCTTCTCAGGACAATCAAGAAGAAGGAACTACCTCCCCACCATCAACACCCAAAGCTGATATTCTAT
TTAAACTACTTCTTGTCAGTACATAAAATGATATAGGACATTAAAACATTTATGTATATCGTACATTAAA
TTATTTTCCCCAAGCATATAAGCATGTAATATATATTTAATGATTTAGGACATACATTTAAACTCAACTA
TAAATTCATAACAACATGTCTATTCTCGAATACATTAAAATAATGCTTATTAGACATATCTGTGTTATTA
GACATGCACCATTAAGTCATAAACCTTTCTCTTCCATATGACTATCCCTGTCCCCAATTGGTCTCTATTT
CTACCATCCTCCGTGAAATCAACAACCCGCCCACTCGTCCCCCTCTTCTCGCTCCGGGCCCATTCGTCCT
GGGGGTGACTATACTGAAACTTTACCAGGCATCTGGTTCTTACTTCAGGGCCATCAATTGGTTTATCGTC
CATACGTTCCCCTTAAATAAGACATCTCGATGGTAACGGGTCTAATCAGCCCATGATCAACATAACTGTG
GTGATATACATTTGGTATTTTTTAATTTTCGGATGCCTTCCTCAACATAGCCGTCAAGGCATGAAGGTCA
GCACAAAGTCCTGTGGAACCTTTTAGTTAAGGGTCATTTATCCTCATAGACAAAGCTCGAAAGACTATTT
TATTCATGTTTGTAAGACATAAATATTTATAAATACTGAAAAATCTGTCAACAAACCCCCCCACCCCCTA
CACCTGAAACTTCAATGCCAAACCCCAAAAACATTAAAGCAAGAATTAAATAAAACAAAAAGCTACTTAA
TTCTTAAAAGGCTTCTCCATTCTAGTAGACCACAAAATTTTAACTTAAATCTTAGCATTGGTAAAATTTC
CCGACACAAAATCTTTCCTTCTAACTAAACCCTCTTTACTTGCCTACCCTCAGAAAATTCCACATACACC
AAA


Contact: Vadim E. Fraifeld, MD, PhD

Head: Lab for the Biology of Aging, The Shraga Segal Department of Microbiology, Immunology and Genetics, Faculty of Health Sciences, Ben-Gurion University of the Negev
P.O. Box 653, Beer-Sheva 8410501, Israel

Email:
How to cite us:

If you would like to cite this database please use:
Toren D, Barzilay T, Tacutu R, Lehmann G, Muradian KK, Fraifeld VE. MitoAge: a database for comparative analysis of mitochondrial DNA, with a special focus on animal longevity. Nucleic Acids Res. 2016; 44(D1):D1262-5.