Viewing data for Alosa sapidissima
| Scientific name | Alosa sapidissima |
| Common name | American shad |
| Maximum lifespan | 13.00 years (Alosa sapidissima@AnAge) |
| Total mtDNA (size: 16697 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 7818 | 8879 | 4821 | 2997 | 4147 | 4732 |
| Base content per 1 kb (bases) | 468 | 532 | 289 | 179 | 248 | 283 |
| Base content (%) | 46.8% | 53.2% | ||||
| Total protein-coding genes (size: 11403 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 5382 | 6021 | 3481 | 1901 | 2941 | 3080 |
| Base content per 1 kb (bases) | 472 | 528 | 305 | 167 | 258 | 270 |
| Base content (%) | 47.2% | 52.8% | ||||
| D-loop (size: 1041 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 374 | 667 | 217 | 157 | 314 | 353 |
| Base content per 1 kb (bases) | 359 | 641 | 208 | 151 | 302 | 339 |
| Base content (%) | 35.9% | 64.1% | ||||
| Total tRNA-coding genes (size: 1554 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 744 | 810 | 406 | 338 | 366 | 444 |
| Base content per 1 kb (bases) | 479 | 521 | 261 | 218 | 236 | 286 |
| Base content (%) | 47.9% | 52.1% | ||||
| Total rRNA-coding genes (size: 2636 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 1284 | 1352 | 700 | 584 | 512 | 840 |
| Base content per 1 kb (bases) | 487 | 513 | 266 | 222 | 194 | 319 |
| Base content (%) | 48.7% | 51.3% | ||||
| 12S rRNA gene (size: 952 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 481 | 471 | 266 | 215 | 191 | 280 |
| Base content per 1 kb (bases) | 505 | 495 | 279 | 226 | 201 | 294 |
| Base content (%) | 50.5% | 49.5% | ||||
| 16S rRNA gene (size: 1684 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 803 | 881 | 434 | 369 | 321 | 560 |
| Base content per 1 kb (bases) | 477 | 523 | 258 | 219 | 191 | 333 |
| Base content (%) | 47.7% | 52.3% | ||||
| ATP6 (size: 684 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 316 | 368 | 219 | 97 | 190 | 178 |
| Base content per 1 kb (bases) | 462 | 538 | 320 | 142 | 278 | 260 |
| Base content (%) | 46.2% | 53.8% | ||||
| ATP8 (size: 168 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 68 | 100 | 47 | 21 | 47 | 53 |
| Base content per 1 kb (bases) | 405 | 595 | 280 | 125 | 280 | 315 |
| Base content (%) | 40.5% | 59.5% | ||||
| COX1 (size: 1551 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 733 | 818 | 418 | 315 | 434 | 384 |
| Base content per 1 kb (bases) | 473 | 527 | 270 | 203 | 280 | 248 |
| Base content (%) | 47.3% | 52.7% | ||||
| COX2 (size: 691 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 316 | 375 | 194 | 122 | 175 | 200 |
| Base content per 1 kb (bases) | 457 | 543 | 281 | 177 | 253 | 289 |
| Base content (%) | 45.7% | 54.3% | ||||
| COX3 (size: 785 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 389 | 396 | 242 | 147 | 201 | 195 |
| Base content per 1 kb (bases) | 496 | 504 | 308 | 187 | 256 | 248 |
| Base content (%) | 49.6% | 50.4% | ||||
| CYTB (size: 1141 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 525 | 616 | 331 | 194 | 314 | 302 |
| Base content per 1 kb (bases) | 460 | 540 | 290 | 170 | 275 | 265 |
| Base content (%) | 46.0% | 54.0% | ||||
| ND1 (size: 975 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 472 | 503 | 304 | 168 | 264 | 239 |
| Base content per 1 kb (bases) | 484 | 516 | 312 | 172 | 271 | 245 |
| Base content (%) | 48.4% | 51.6% | ||||
| ND2 (size: 1045 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 529 | 516 | 382 | 147 | 235 | 281 |
| Base content per 1 kb (bases) | 506 | 494 | 366 | 141 | 225 | 269 |
| Base content (%) | 50.6% | 49.4% | ||||
| ND3 (size: 349 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 169 | 180 | 108 | 61 | 98 | 82 |
| Base content per 1 kb (bases) | 484 | 516 | 309 | 175 | 281 | 235 |
| Base content (%) | 48.4% | 51.6% | ||||
| ND4 (size: 1381 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 642 | 739 | 406 | 236 | 368 | 371 |
| Base content per 1 kb (bases) | 465 | 535 | 294 | 171 | 266 | 269 |
| Base content (%) | 46.5% | 53.5% | ||||
| ND4L (size: 297 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 147 | 150 | 94 | 53 | 81 | 69 |
| Base content per 1 kb (bases) | 495 | 505 | 316 | 178 | 273 | 232 |
| Base content (%) | 49.5% | 50.5% | ||||
| ND5 (size: 1836 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 839 | 997 | 571 | 268 | 465 | 532 |
| Base content per 1 kb (bases) | 457 | 543 | 311 | 146 | 253 | 290 |
| Base content (%) | 45.7% | 54.3% | ||||
| ND6 (size: 522 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 241 | 281 | 167 | 74 | 76 | 205 |
| Base content per 1 kb (bases) | 462 | 538 | 320 | 142 | 146 | 393 |
| Base content (%) | 46.2% | 53.8% | ||||
| ATP6 (size: 684 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
Amino acid frequencies:
Glycine (Gly, G)
n = 11 (4.85%) 
Alanine (Ala, A)
n = 21 (9.25%) 
Serine (Ser, S)
n = 8 (3.52%) 
Threonine (Thr, T)
n = 23 (10.13%) 
Cysteine (Cys, C)
n = 0 (0%) 
Valine (Val, V)
n = 14 (6.17%) 
Leucine (Leu, L)
n = 49 (21.59%) 
Isoleucine (Ile, I)
n = 21 (9.25%) 
Methionine (Met, M)
n = 9 (3.96%) 
Proline (Pro, P)
n = 17 (7.49%) 
Phenylalanine (Phe, F)
n = 12 (5.29%) 
Tyrosine (Tyr, Y)
n = 5 (2.2%) 
Tryptophan (Trp, W)
n = 5 (2.2%) 
Aspartic acid (Asp, D)
n = 1 (0.44%) 
Glutamic acid (Glu, E)
n = 3 (1.32%) 
Asparagine (Asn, N)
n = 8 (3.52%) 
Glutamine (Gln, Q)
n = 9 (3.96%) 
Histidine (His, H)
n = 4 (1.76%) 
Lysine (Lys, K)
n = 1 (0.44%) 
Arginine (Arg, R)
n = 6 (2.64%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 13 | 8 | 2 | 10 | 13 | 14 | 4 | 8 | 8 | 1 | 1 | 7 | 5 | 1 | 6 | 6 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 7 | 0 | 0 | 2 | 10 | 7 | 2 | 1 | 5 | 3 | 2 | 4 | 7 | 6 | 0 | 4 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 4 | 14 | 1 | 4 | 0 | 0 | 0 | 0 | 4 | 2 | 3 | 1 | 0 | 2 | 6 | 1 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 3 | 2 | 1 | 0 | 1 | 1 | 0 | 0 | 0 | 5 | 1 | 0 | 0 | 1 | 0 | 4 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 50 | 77 | 66 | 35 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 26 | 65 | 32 | 105 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 21 | 77 | 80 | 50 | ||||||||||||
| ATP8 (size: 168 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: MPQLNPAPWFAILVFSWLIFLTVIPPKVLAHNFNNEPTTVGAEKAKPEPWNWPWY* | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 1 (1.82%)
Alanine (Ala, A)
n = 5 (9.09%)
Serine (Ser, S)
n = 1 (1.82%)
Threonine (Thr, T)
n = 3 (5.45%)
Cysteine (Cys, C)
n = 0 (0%)
Valine (Val, V)
n = 4 (7.27%)
Leucine (Leu, L)
n = 5 (9.09%)
Isoleucine (Ile, I)
n = 3 (5.45%)
Methionine (Met, M)
n = 1 (1.82%)
Proline (Pro, P)
n = 9 (16.36%)
Phenylalanine (Phe, F)
n = 4 (7.27%)
Tyrosine (Tyr, Y)
n = 1 (1.82%)
Tryptophan (Trp, W)
n = 5 (9.09%)
Aspartic acid (Asp, D)
n = 0 (0%)
Glutamic acid (Glu, E)
n = 3 (5.45%)
Asparagine (Asn, N)
n = 5 (9.09%)
Glutamine (Gln, Q)
n = 1 (1.82%)
Histidine (His, H)
n = 1 (1.82%)
Lysine (Lys, K)
n = 3 (5.45%)
Arginine (Arg, R)
n = 0 (0%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 3 | 0 | 0 | 1 | 0 | 3 | 0 | 0 | 1 | 0 | 0 | 3 | 1 | 0 | 2 | 2 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 1 | 0 | 0 | 3 | 1 | 1 | 0 | 0 | 0 | 1 | 0 | 4 | 3 | 2 | 0 | 1 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 0 | 2 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 1 | 1 | 4 | 1 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 0 | 3 | 0 | 0 | 0 | 3 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 5 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 13 | 15 | 15 | 13 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 6 | 18 | 15 | 17 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 2 | 14 | 23 | 17 | ||||||||||||
| COX1 (size: 1551 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 45 (8.72%)
Alanine (Ala, A)
n = 48 (9.3%)
Serine (Ser, S)
n = 31 (6.01%)
Threonine (Thr, T)
n = 35 (6.78%)
Cysteine (Cys, C)
n = 1 (0.19%)
Valine (Val, V)
n = 42 (8.14%)
Leucine (Leu, L)
n = 63 (12.21%)
Isoleucine (Ile, I)
n = 37 (7.17%)
Methionine (Met, M)
n = 25 (4.84%)
Proline (Pro, P)
n = 28 (5.43%)
Phenylalanine (Phe, F)
n = 40 (7.75%)
Tyrosine (Tyr, Y)
n = 19 (3.68%)
Tryptophan (Trp, W)
n = 17 (3.29%)
Aspartic acid (Asp, D)
n = 16 (3.1%)
Glutamic acid (Glu, E)
n = 10 (1.94%)
Asparagine (Asn, N)
n = 14 (2.71%)
Glutamine (Gln, Q)
n = 8 (1.55%)
Histidine (His, H)
n = 19 (3.68%)
Lysine (Lys, K)
n = 9 (1.74%)
Arginine (Arg, R)
n = 9 (1.74%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 23 | 14 | 5 | 17 | 11 | 19 | 9 | 6 | 7 | 1 | 7 | 7 | 21 | 7 | 16 | 24 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 20 | 0 | 1 | 5 | 23 | 17 | 3 | 5 | 7 | 13 | 20 | 6 | 7 | 12 | 3 | 7 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 10 | 14 | 4 | 3 | 9 | 13 | 1 | 1 | 4 | 8 | 11 | 1 | 1 | 8 | 6 | 3 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 16 | 6 | 4 | 6 | 10 | 8 | 1 | 1 | 1 | 5 | 2 | 0 | 0 | 1 | 0 | 16 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 161 | 120 | 125 | 111 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 77 | 137 | 96 | 207 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 77 | 161 | 163 | 116 | ||||||||||||
| COX2 (size: 691 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 9 (3.93%)
Alanine (Ala, A)
n = 14 (6.11%)
Serine (Ser, S)
n = 18 (7.86%)
Threonine (Thr, T)
n = 12 (5.24%)
Cysteine (Cys, C)
n = 2 (0.87%)
Valine (Val, V)
n = 23 (10.04%)
Leucine (Leu, L)
n = 27 (11.79%)
Isoleucine (Ile, I)
n = 16 (6.99%)
Methionine (Met, M)
n = 11 (4.8%)
Proline (Pro, P)
n = 16 (6.99%)
Phenylalanine (Phe, F)
n = 6 (2.62%)
Tyrosine (Tyr, Y)
n = 10 (4.37%)
Tryptophan (Trp, W)
n = 5 (2.18%)
Aspartic acid (Asp, D)
n = 12 (5.24%)
Glutamic acid (Glu, E)
n = 14 (6.11%)
Asparagine (Asn, N)
n = 6 (2.62%)
Glutamine (Gln, Q)
n = 7 (3.06%)
Histidine (His, H)
n = 9 (3.93%)
Lysine (Lys, K)
n = 4 (1.75%)
Arginine (Arg, R)
n = 9 (3.93%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 11 | 5 | 4 | 8 | 2 | 13 | 3 | 0 | 6 | 1 | 8 | 3 | 9 | 3 | 4 | 2 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 7 | 1 | 1 | 1 | 5 | 6 | 2 | 2 | 2 | 4 | 1 | 3 | 5 | 8 | 0 | 3 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 3 | 5 | 1 | 2 | 8 | 4 | 0 | 1 | 3 | 3 | 7 | 0 | 1 | 2 | 4 | 2 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 7 | 12 | 2 | 1 | 11 | 4 | 0 | 1 | 3 | 5 | 0 | 0 | 0 | 0 | 0 | 5 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 72 | 67 | 53 | 38 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 29 | 56 | 62 | 83 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 21 | 71 | 85 | 53 | ||||||||||||
| COX3 (size: 785 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 23 (8.85%)
Alanine (Ala, A)
n = 21 (8.08%)
Serine (Ser, S)
n = 13 (5.0%)
Threonine (Thr, T)
n = 24 (9.23%)
Cysteine (Cys, C)
n = 2 (0.77%)
Valine (Val, V)
n = 20 (7.69%)
Leucine (Leu, L)
n = 35 (13.46%)
Isoleucine (Ile, I)
n = 10 (3.85%)
Methionine (Met, M)
n = 6 (2.31%)
Proline (Pro, P)
n = 13 (5.0%)
Phenylalanine (Phe, F)
n = 25 (9.62%)
Tyrosine (Tyr, Y)
n = 10 (3.85%)
Tryptophan (Trp, W)
n = 12 (4.62%)
Aspartic acid (Asp, D)
n = 5 (1.92%)
Glutamic acid (Glu, E)
n = 8 (3.08%)
Asparagine (Asn, N)
n = 2 (0.77%)
Glutamine (Gln, Q)
n = 8 (3.08%)
Histidine (His, H)
n = 16 (6.15%)
Lysine (Lys, K)
n = 2 (0.77%)
Arginine (Arg, R)
n = 6 (2.31%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 5 | 5 | 4 | 7 | 5 | 15 | 7 | 1 | 7 | 1 | 5 | 4 | 7 | 4 | 8 | 17 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 2 | 1 | 1 | 1 | 13 | 7 | 0 | 1 | 6 | 9 | 7 | 2 | 4 | 6 | 1 | 6 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 7 | 10 | 1 | 2 | 2 | 6 | 0 | 0 | 3 | 1 | 9 | 0 | 0 | 1 | 1 | 2 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 14 | 8 | 0 | 0 | 5 | 1 | 1 | 2 | 1 | 3 | 0 | 0 | 0 | 0 | 0 | 12 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 77 | 77 | 47 | 60 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 46 | 68 | 51 | 96 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 24 | 97 | 96 | 44 | ||||||||||||
| CYTB (size: 1141 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 28 (7.39%)
Alanine (Ala, A)
n = 37 (9.76%)
Serine (Ser, S)
n = 24 (6.33%)
Threonine (Thr, T)
n = 19 (5.01%)
Cysteine (Cys, C)
n = 3 (0.79%)
Valine (Val, V)
n = 28 (7.39%)
Leucine (Leu, L)
n = 57 (15.04%)
Isoleucine (Ile, I)
n = 27 (7.12%)
Methionine (Met, M)
n = 11 (2.9%)
Proline (Pro, P)
n = 21 (5.54%)
Phenylalanine (Phe, F)
n = 29 (7.65%)
Tyrosine (Tyr, Y)
n = 15 (3.96%)
Tryptophan (Trp, W)
n = 13 (3.43%)
Aspartic acid (Asp, D)
n = 11 (2.9%)
Glutamic acid (Glu, E)
n = 7 (1.85%)
Asparagine (Asn, N)
n = 16 (4.22%)
Glutamine (Gln, Q)
n = 4 (1.06%)
Histidine (His, H)
n = 13 (3.43%)
Lysine (Lys, K)
n = 9 (2.37%)
Arginine (Arg, R)
n = 8 (2.11%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 16 | 11 | 6 | 9 | 7 | 22 | 4 | 14 | 3 | 1 | 5 | 9 | 14 | 0 | 4 | 25 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 5 | 1 | 2 | 5 | 17 | 13 | 2 | 3 | 6 | 13 | 6 | 2 | 9 | 10 | 0 | 3 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 6 | 9 | 1 | 6 | 4 | 10 | 1 | 1 | 2 | 2 | 13 | 1 | 1 | 2 | 14 | 1 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 12 | 3 | 4 | 3 | 8 | 8 | 1 | 2 | 0 | 5 | 1 | 0 | 0 | 0 | 0 | 12 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 111 | 88 | 85 | 96 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 55 | 98 | 75 | 152 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 28 | 145 | 142 | 65 | ||||||||||||
| ND1 (size: 975 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 20 (6.17%)
Alanine (Ala, A)
n = 34 (10.49%)
Serine (Ser, S)
n = 23 (7.1%)
Threonine (Thr, T)
n = 20 (6.17%)
Cysteine (Cys, C)
n = 1 (0.31%)
Valine (Val, V)
n = 19 (5.86%)
Leucine (Leu, L)
n = 58 (17.9%)
Isoleucine (Ile, I)
n = 22 (6.79%)
Methionine (Met, M)
n = 10 (3.09%)
Proline (Pro, P)
n = 24 (7.41%)
Phenylalanine (Phe, F)
n = 24 (7.41%)
Tyrosine (Tyr, Y)
n = 11 (3.4%)
Tryptophan (Trp, W)
n = 8 (2.47%)
Aspartic acid (Asp, D)
n = 4 (1.23%)
Glutamic acid (Glu, E)
n = 11 (3.4%)
Asparagine (Asn, N)
n = 9 (2.78%)
Glutamine (Gln, Q)
n = 6 (1.85%)
Histidine (His, H)
n = 5 (1.54%)
Lysine (Lys, K)
n = 7 (2.16%)
Arginine (Arg, R)
n = 8 (2.47%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 11 | 11 | 6 | 13 | 10 | 22 | 8 | 3 | 6 | 0 | 2 | 5 | 7 | 5 | 11 | 13 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 4 | 0 | 1 | 1 | 19 | 14 | 0 | 2 | 2 | 6 | 10 | 7 | 8 | 6 | 3 | 3 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 9 | 8 | 0 | 3 | 9 | 7 | 0 | 0 | 4 | 1 | 10 | 1 | 2 | 5 | 4 | 1 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 4 | 8 | 3 | 2 | 2 | 7 | 0 | 0 | 0 | 6 | 2 | 0 | 0 | 0 | 1 | 7 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 88 | 96 | 72 | 69 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 41 | 97 | 54 | 133 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 39 | 111 | 113 | 62 | ||||||||||||
| ND2 (size: 1045 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 17 (4.9%)
Alanine (Ala, A)
n = 45 (12.97%)
Serine (Ser, S)
n = 27 (7.78%)
Threonine (Thr, T)
n = 51 (14.7%)
Cysteine (Cys, C)
n = 2 (0.58%)
Valine (Val, V)
n = 11 (3.17%)
Leucine (Leu, L)
n = 64 (18.44%)
Isoleucine (Ile, I)
n = 22 (6.34%)
Methionine (Met, M)
n = 15 (4.32%)
Proline (Pro, P)
n = 19 (5.48%)
Phenylalanine (Phe, F)
n = 8 (2.31%)
Tyrosine (Tyr, Y)
n = 10 (2.88%)
Tryptophan (Trp, W)
n = 10 (2.88%)
Aspartic acid (Asp, D)
n = 1 (0.29%)
Glutamic acid (Glu, E)
n = 4 (1.15%)
Asparagine (Asn, N)
n = 8 (2.31%)
Glutamine (Gln, Q)
n = 14 (4.03%)
Histidine (His, H)
n = 7 (2.02%)
Lysine (Lys, K)
n = 8 (2.31%)
Arginine (Arg, R)
n = 5 (1.44%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 11 | 11 | 9 | 9 | 18 | 22 | 6 | 6 | 13 | 1 | 3 | 3 | 5 | 0 | 3 | 5 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 6 | 0 | 2 | 3 | 29 | 12 | 1 | 1 | 4 | 9 | 3 | 6 | 10 | 2 | 1 | 6 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 25 | 15 | 5 | 4 | 12 | 3 | 2 | 1 | 5 | 3 | 7 | 0 | 3 | 1 | 7 | 1 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 6 | 4 | 0 | 0 | 1 | 7 | 1 | 2 | 1 | 2 | 0 | 0 | 0 | 0 | 0 | 10 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 78 | 100 | 110 | 60 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 40 | 136 | 52 | 120 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 29 | 146 | 119 | 54 | ||||||||||||
| ND3 (size: 1045 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 17 (4.9%)
Alanine (Ala, A)
n = 45 (12.97%)
Serine (Ser, S)
n = 27 (7.78%)
Threonine (Thr, T)
n = 51 (14.7%)
Cysteine (Cys, C)
n = 2 (0.58%)
Valine (Val, V)
n = 11 (3.17%)
Leucine (Leu, L)
n = 64 (18.44%)
Isoleucine (Ile, I)
n = 22 (6.34%)
Methionine (Met, M)
n = 15 (4.32%)
Proline (Pro, P)
n = 19 (5.48%)
Phenylalanine (Phe, F)
n = 8 (2.31%)
Tyrosine (Tyr, Y)
n = 10 (2.88%)
Tryptophan (Trp, W)
n = 10 (2.88%)
Aspartic acid (Asp, D)
n = 1 (0.29%)
Glutamic acid (Glu, E)
n = 4 (1.15%)
Asparagine (Asn, N)
n = 8 (2.31%)
Glutamine (Gln, Q)
n = 14 (4.03%)
Histidine (His, H)
n = 7 (2.02%)
Lysine (Lys, K)
n = 8 (2.31%)
Arginine (Arg, R)
n = 5 (1.44%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 11 | 11 | 9 | 9 | 18 | 22 | 6 | 6 | 13 | 1 | 3 | 3 | 5 | 0 | 3 | 5 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 6 | 0 | 2 | 3 | 29 | 12 | 1 | 1 | 4 | 9 | 3 | 6 | 10 | 2 | 1 | 6 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 25 | 15 | 5 | 4 | 12 | 3 | 2 | 1 | 5 | 3 | 7 | 0 | 3 | 1 | 7 | 1 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 6 | 4 | 0 | 0 | 1 | 7 | 1 | 2 | 1 | 2 | 0 | 0 | 0 | 0 | 0 | 10 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 78 | 100 | 110 | 60 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 40 | 136 | 52 | 120 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 29 | 146 | 119 | 54 | ||||||||||||
| ND4 (size: 1381 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 29 (6.32%)
Alanine (Ala, A)
n = 39 (8.5%)
Serine (Ser, S)
n = 27 (5.88%)
Threonine (Thr, T)
n = 42 (9.15%)
Cysteine (Cys, C)
n = 5 (1.09%)
Valine (Val, V)
n = 21 (4.58%)
Leucine (Leu, L)
n = 85 (18.52%)
Isoleucine (Ile, I)
n = 37 (8.06%)
Methionine (Met, M)
n = 26 (5.66%)
Proline (Pro, P)
n = 27 (5.88%)
Phenylalanine (Phe, F)
n = 17 (3.7%)
Tyrosine (Tyr, Y)
n = 15 (3.27%)
Tryptophan (Trp, W)
n = 20 (4.36%)
Aspartic acid (Asp, D)
n = 4 (0.87%)
Glutamic acid (Glu, E)
n = 11 (2.4%)
Asparagine (Asn, N)
n = 13 (2.83%)
Glutamine (Gln, Q)
n = 11 (2.4%)
Histidine (His, H)
n = 10 (2.18%)
Lysine (Lys, K)
n = 10 (2.18%)
Arginine (Arg, R)
n = 11 (2.4%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 22 | 15 | 13 | 17 | 18 | 22 | 9 | 13 | 8 | 3 | 5 | 7 | 5 | 4 | 5 | 12 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 13 | 4 | 1 | 1 | 19 | 16 | 3 | 2 | 11 | 11 | 5 | 6 | 10 | 10 | 1 | 6 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 14 | 20 | 2 | 3 | 9 | 7 | 0 | 2 | 6 | 6 | 9 | 7 | 6 | 4 | 9 | 3 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 7 | 7 | 4 | 0 | 4 | 9 | 1 | 0 | 3 | 7 | 1 | 0 | 0 | 0 | 0 | 13 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 104 | 125 | 136 | 95 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 73 | 127 | 74 | 186 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 59 | 154 | 161 | 86 | ||||||||||||
| ND4L (size: 297 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 5 (5.1%)
Alanine (Ala, A)
n = 13 (13.27%)
Serine (Ser, S)
n = 7 (7.14%)
Threonine (Thr, T)
n = 9 (9.18%)
Cysteine (Cys, C)
n = 3 (3.06%)
Valine (Val, V)
n = 2 (2.04%)
Leucine (Leu, L)
n = 23 (23.47%)
Isoleucine (Ile, I)
n = 1 (1.02%)
Methionine (Met, M)
n = 6 (6.12%)
Proline (Pro, P)
n = 1 (1.02%)
Phenylalanine (Phe, F)
n = 9 (9.18%)
Tyrosine (Tyr, Y)
n = 0 (0%)
Tryptophan (Trp, W)
n = 1 (1.02%)
Aspartic acid (Asp, D)
n = 1 (1.02%)
Glutamic acid (Glu, E)
n = 3 (3.06%)
Asparagine (Asn, N)
n = 3 (3.06%)
Glutamine (Gln, Q)
n = 3 (3.06%)
Histidine (His, H)
n = 4 (4.08%)
Lysine (Lys, K)
n = 0 (0%)
Arginine (Arg, R)
n = 4 (4.08%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 0 | 1 | 3 | 4 | 6 | 7 | 3 | 3 | 3 | 0 | 0 | 0 | 0 | 2 | 5 | 4 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 3 | 2 | 1 | 3 | 4 | 5 | 1 | 1 | 3 | 1 | 0 | 0 | 1 | 0 | 0 | 0 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 4 | 4 | 1 | 3 | 1 | 0 | 0 | 1 | 2 | 0 | 0 | 1 | 0 | 0 | 3 | 0 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 4 | 2 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | 3 | 1 | 0 | 0 | 1 | 0 | 0 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 24 | 32 | 22 | 21 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 16 | 27 | 15 | 41 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 13 | 35 | 32 | 19 | ||||||||||||
| ND5 (size: 1836 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 33 (5.4%)
Alanine (Ala, A)
n = 60 (9.82%)
Serine (Ser, S)
n = 42 (6.87%)
Threonine (Thr, T)
n = 63 (10.31%)
Cysteine (Cys, C)
n = 6 (0.98%)
Valine (Val, V)
n = 31 (5.07%)
Leucine (Leu, L)
n = 84 (13.75%)
Isoleucine (Ile, I)
n = 53 (8.67%)
Methionine (Met, M)
n = 30 (4.91%)
Proline (Pro, P)
n = 33 (5.4%)
Phenylalanine (Phe, F)
n = 40 (6.55%)
Tyrosine (Tyr, Y)
n = 11 (1.8%)
Tryptophan (Trp, W)
n = 14 (2.29%)
Aspartic acid (Asp, D)
n = 14 (2.29%)
Glutamic acid (Glu, E)
n = 10 (1.64%)
Asparagine (Asn, N)
n = 25 (4.09%)
Glutamine (Gln, Q)
n = 19 (3.11%)
Histidine (His, H)
n = 13 (2.13%)
Lysine (Lys, K)
n = 20 (3.27%)
Arginine (Arg, R)
n = 10 (1.64%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 26 | 27 | 15 | 17 | 16 | 32 | 8 | 10 | 16 | 3 | 9 | 6 | 12 | 4 | 15 | 25 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 15 | 3 | 3 | 7 | 35 | 18 | 0 | 4 | 11 | 14 | 4 | 8 | 17 | 8 | 0 | 7 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 25 | 28 | 3 | 3 | 11 | 15 | 1 | 2 | 10 | 3 | 8 | 1 | 1 | 6 | 19 | 2 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 11 | 8 | 2 | 2 | 12 | 17 | 3 | 0 | 1 | 9 | 0 | 0 | 0 | 1 | 0 | 13 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 148 | 148 | 203 | 113 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 75 | 186 | 113 | 238 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 45 | 237 | 216 | 114 | ||||||||||||
| ND6 (size: 522 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 22 (12.72%)
Alanine (Ala, A)
n = 19 (10.98%)
Serine (Ser, S)
n = 14 (8.09%)
Threonine (Thr, T)
n = 4 (2.31%)
Cysteine (Cys, C)
n = 4 (2.31%)
Valine (Val, V)
n = 24 (13.87%)
Leucine (Leu, L)
n = 29 (16.76%)
Isoleucine (Ile, I)
n = 1 (0.58%)
Methionine (Met, M)
n = 10 (5.78%)
Proline (Pro, P)
n = 5 (2.89%)
Phenylalanine (Phe, F)
n = 14 (8.09%)
Tyrosine (Tyr, Y)
n = 8 (4.62%)
Tryptophan (Trp, W)
n = 4 (2.31%)
Aspartic acid (Asp, D)
n = 3 (1.73%)
Glutamic acid (Glu, E)
n = 4 (2.31%)
Asparagine (Asn, N)
n = 1 (0.58%)
Glutamine (Gln, Q)
n = 0 (0%)
Histidine (His, H)
n = 2 (1.16%)
Lysine (Lys, K)
n = 1 (0.58%)
Arginine (Arg, R)
n = 4 (2.31%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 1 | 0 | 0 | 2 | 2 | 0 | 0 | 16 | 0 | 0 | 11 | 2 | 5 | 6 | 11 | 3 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 10 | 3 | 1 | 7 | 3 | 4 | 5 | 5 | 2 | 1 | 14 | 2 | 0 | 0 | 3 | 3 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 1 | 0 | 0 | 4 | 1 | 3 | 1 | 3 | 2 | 5 | 3 | 1 | 9 | 1 | 0 | 1 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 1 | 1 | 3 | 2 | 1 | 1 | 0 | 1 | 0 | 0 | 3 | 0 | 0 | 0 | 1 | 3 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 72 | 15 | 22 | 65 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 39 | 37 | 20 | 78 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 56 | 22 | 34 | 62 | ||||||||||||
| Total protein-coding genes (size: 11425 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 249 (6.54%)
Alanine (Ala, A)
n = 364 (9.57%)
Serine (Ser, S)
n = 243 (6.39%)
Threonine (Thr, T)
n = 310 (8.15%)
Cysteine (Cys, C)
n = 30 (0.79%)
Valine (Val, V)
n = 246 (6.47%)
Leucine (Leu, L)
n = 606 (15.93%)
Isoleucine (Ile, I)
n = 260 (6.83%)
Methionine (Met, M)
n = 164 (4.31%)
Proline (Pro, P)
n = 221 (5.81%)
Phenylalanine (Phe, F)
n = 235 (6.18%)
Tyrosine (Tyr, Y)
n = 117 (3.07%)
Tryptophan (Trp, W)
n = 119 (3.13%)
Aspartic acid (Asp, D)
n = 75 (1.97%)
Glutamic acid (Glu, E)
n = 94 (2.47%)
Asparagine (Asn, N)
n = 113 (2.97%)
Glutamine (Gln, Q)
n = 93 (2.44%)
Histidine (His, H)
n = 103 (2.71%)
Lysine (Lys, K)
n = 75 (1.97%)
Arginine (Arg, R)
n = 82 (2.16%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 145 | 115 | 69 | 117 | 112 | 204 | 65 | 83 | 80 | 13 | 57 | 59 | 94 | 36 | 92 | 143 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 95 | 15 | 15 | 39 | 183 | 123 | 19 | 28 | 60 | 87 | 74 | 52 | 85 | 71 | 13 | 49 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 112 | 130 | 19 | 38 | 70 | 71 | 6 | 13 | 45 | 36 | 81 | 16 | 25 | 34 | 79 | 18 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 85 | 66 | 28 | 17 | 58 | 67 | 8 | 9 | 11 | 51 | 11 | 0 | 0 | 5 | 2 | 103 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 1028 | 997 | 980 | 801 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 538 | 1080 | 677 | 1511 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 430 | 1313 | 1304 | 759 | ||||||||||||
>NC_014690.1 Alosa sapidissima mitochondrion, complete genome GATAGTGTAGCTTAGAGTAAAGCATAACATTGAAGATGTTAGTACGGGTCGTAGAAAGCCCCACGGTCAC AAAAGTTTGGTCCTGACTTTATTATCAGCTCTAACCCAATTTACACATGCAAGCCTCCGCACCCCTGTGA GGATGCCCTCAATCCCCCGTCCGGGGACGAGGAGCCGGTATCAGGCACACTTTTTAGCCCAAGACGCCTT GCTTAGCCACACCCCCAAGGGAATTCAGCAGTGATAGACATTAAGCCATAAGTGAAAACTTGACTTAGTC AGGGTTAAGAGGGCCGGTAAAACTCGTGCCAGCCACCGCGGTTATACGAGAGGCCCTAGTTGATTCACTC GGCGTAAAGAGTGGTTATGGAGAATAAAATACTAAAGCCGAAGGCCCCTTAGGCCGTCATACGCACCTAG AGGCTCGAATTATAGACACGAAAGTAGCTTTACCCCTTCCCACCAGAACCCACGACAGCTGGGACACAAA CTGGGATTAGATACCCCACTATGCCCCGCCGTAAACTTAGATATTCCAGTACAACAAATATCCGCCAGGG GACTACGAGCGCCAGCTTAAAACCCAAAGGACTTGGCGGTGCTTCAGACCCCCCTAGAGGAGCCTGTTCT AGAACCGATAACCCCCGTTCAACCTCACTACTCCTTGCTTTTCCCGCCTATATACCACCGTCGCCAGCTT ACCCTGTGAAGGTACTACAGTAAGCAGAATGAATAATACTCAAAACGTCAGGTCGAGGTGTAGCGTACGA AGTAGGAAGAAATGGGCTACATTATCTGATCCAGATTATTCACGGAAGATTGTCTGAAACGACAATCCGA AGGTGGATTTAGCAGTAAAGGGGGAATAGAGTGCCCCCTTGAAGCCGGCTCTGAAGCGCGCACACACCGC CCGTCACTCTCCCCAACAACCACCCACACCAAGGTAAATAACACAACACCCGTCACAAGGGGAGGCAAGT CGTAACATGGTAAGTGTACCGGAAGGTGCACTTGGAATAATCCGGGTGTGGCTGAGACAGTTAAGCGACT CCCTTACACCGAGAATACATTCATGCAAGTTGGATCGCCCGGAACTAAACAGCTAGCTCAAACTATAAAA ACCAAGTTAATGATATAAATAGTTCTACAAAAAGCTAAAAGCACAAACTAAACCATTCGACCACCCCAGT ACGGGCGACAGAAAAGGAAATAAAGACGCTATAGACAAAGTACCGCAAGGGAAAGCTGAAAGAGAAATGA AATAACGCACTAAAGTAAATAAAAGCAGAGACTACATCTCGTACCTTTTGCATCATGATCTAGCCAGTAA CCTCAAGCAAAGAGACCTCTAGTTTGAACCCCCGAAACCGGACGAGCTACTCCGGGGCAGCCTATTATAG GGCCAACCCGTCTCTGTGGCAAAAGAGTGGGAAGACCCCCGAGTAGAGGTGAAAGACCTACCGAGTCAGG TTATAGCTGGTTGCCCAAGAAATGAATAGAAGTTCAGCCCCGCCACGCCCTTACCCACAACAGTTTTACT TAAACAAGGCATAAAGGACACCCGCGGGAGTTAGTCAAGGGAGGTACAGCTCCCTTAACAAAGGACACAA CCTTAAACGGGAGGCTAAGGAATATATTAAACTAAGGCCCTAGGTTTCAGTGGGCCTAAAAGCAGCCACC TGAACAGAAAGCGTTAAAGCTCAGACCAGTCCAAGCCTATTATAACATTAAAATCTCCAAAGCCCCCAAT ATTACTGGGCCATCCTATGCCCCCATAGGAGGGACCATGCTAGAACGAGTAATAAGAAGAAAGACCTTCT CCCAGCACATGTGTAAGTCGAATCGGACACCCCATCGACAATTAACGAACCCAACAAAAGAGGGTAGTAC ACCACCGCCACCCCAGGCCAAGAAAACCATGTAATAGAACATCGTTACCCCCACACAGGAGTGCTTAAAT CAAGGGAAAGACTTAAAGGATAAAAAGGAACTCGGCAAACCAAAACCCCGCCTGTTTACCAAAAACATCG CCTCCTGCCACCACTAATTATAGGAGGTCCCGCCTGCCCTGTGACCAAAAGTTTAACGGCCGCGGTATTT TAACCGTGCAAAGGTAGCGCAATCAATTGTCTTTTAAATGGAGACCTGTATGAATGGCATAACGAGGGTT TAACTGTCTCTTTTTCCCGGTCAATGAAACTGATCTACCCGTGCAGAAGCGGGTATTTACACACAAGACG AGAAGACCCTATGGAGCTTTAGACGCCAACCAACCACGAAAAGCGGCCGCTGACTGGACCCTTAAACAAC GTGATTATGGCATAAGCGTCTTCGGTTGGGGCGACCACGGGAGATAACAAAGCTCCCGAGTGGATAGGGG GACACCCTAAAACCCAGAGCCACAGCTCTAAGTCACAAAACATTTGACCAATAATGATCCGGCTTTATGC CGACCAACGAACCAAGTTACCCTAGGGATAACAGCGCAATCCCCTCCCAGAGTCCATATCGACGAGGGGG TTTACGACCTCGATGTTGGATCAGGACATCCTAATGGTGCAGCCGCTATTAAGGGTTCGTTTGTTCAACG ATTAAAGTCCTACGTGATCTGAGTTCAGACCGGAGTAATCCAGGTCAGTTTCTATCTGTGAAACCACCCT TCCTAGTACGAAAGGACCGGAGTGATGAGGCCCCTGCTTTAAGCACGCCTCCCCCCAACCTGCTGAATAC AACTGAAGTAGGTAAAGGGGGGTAATCCCCGGCCCAAGAGAAGGGCGCGCTAGGGTGGCAGAGCCCGGTA AATGCAGGAAGCCTAAGACTTCCCTCCCCAGAGGTTCAAATCCTCTCCTTAGCTATGCTTCACATTATCA TAGCCCACATCATCAACCCCCTTGCCTACATCGTACCGGTCCTACTCGCCGTAGCTTTTCTGACCCTAAT TGAACGAAAAGTCTTGGGCTACATGCAACTACGAAAAGGACCAAATGTGGTAGGCCCTTACGGACTACTT CAACCAATCGCAGACGGAGTTAAACTCTTTATTAAAGAACCTGTCCGACCGTCCACATCCTCCCCATTCT TATTCCTGGCCACCCCTACCTTGGCCCTCACACTGGCACTCACACTATGAGCACCTCTGCCCCTACCCTT CCCTGTCACTGATCTTAATCTCAGCATACTATTTATTTTAGCACTGTCCAGCCTAGCCGTGTACTCAATC CTAGGGTCTGGGTGAGCATCTAATTCAAAATACGCCCTAATTGGGGCCCTACGGGCCGTCGCCCAAACCA TTTCCTACGAAGTGGCCCTGGGGCTCATTCTTCTATGCACAATCGTATTTACAGGGGGTTTTACCCTGTC AATATTTAGCATCACACAAGAAGGAATTTGACTACTAGCCCCGGCATGACCTCTTGCAGCAATGTGGTAC ATCTCCACACTAGCAGAAACCAATCGAGCACCATTTGATCTAACTGAGGGGGAGTCAGAACTTGTATCCG GGTTCAACGTAGAATACGCCGGAGGACCCTTCGCCCTTTTCTTCCTGGCCGAATACGCCAACATTCTCTT CATAAATACCCTATCAGCAGTACTCTTTATGGGGGCCTCACACTTCCCCTCATTTCCCGAGTTTACCACC ATTAGCATCATATTTAAAGCAGCCCTTCTTTCTGGGCTATTCTTATGAGTTCGGGCCTCCTACCCACGAT TCCGATATGACCAACTAATACACCTAGTGTGAAAAAACTTCCTTCCCCTTACACTAGCACTAATTCTCTG ACATATCTCCCTTCCAGTGGGGACTGCAGGTCTCCCTCCCCAATTCTAGGTAAACCTGGAGCTGTGCCTG AACGTCTAAGGGGTACTTTGATAGAGTGAACCACGGGGGTTAAACTCCCCCCAGCTCCTTAGAAAAAAGG GATTCGAACCCGTCCTCCAGAGATCAAAACTCTGGGTGCTTCCACTACACCACTTTCTAGTAAGGTCAGC TAAATAAGCTCTCGGGCCCATACCCCGAGTATGTCGGTTAAAATCCTTCCCCTATTAATGAACCCTTACG TACTCACAATCCTGCTCTCTAGCCTCGGCCTAGGAACTACAATAACCTTTGCAAGCTCCCACTGACTGCT AGCATGAATGGGCTTGGAAATTAACACCCTTGCCATCGTCCCCATAATAGCCTACCAACACCACCCCCGT GCCGTAGAAGCCACGACCAAATACTTCCTCACACAAGCCACGGCAGCAGCTATGCTTCTATTTGCTAGCA CCACCAACGCATGAATCACCGGACAATGAGAAATCACCCAACTCTCCCACCCCGTCGCCTCTTCCATCGC CATTACAGCTTTAGCACTAAAAATTGGCCTAGCCCCCATGCACGCCTGCCGTTCGACGATTCTCCAAGGA ATCACGCTAACCACAGGACTAGTATTATCCACTTGACAAAAGCTAGCCCCATTTGCACTAATCCTCCAAG TTGCGGACAACGCCCACCCTTACTTACTTACAACATTAGCAATCTCTTCCACACTAGTCGGAGGGTGAGG GGGACTTAACCAAACCCAACTACGCAAAATCCTAGCATATTCCTCAATCGCACATCTAGGGTGAATAATT CTAGTAGCCCAAATGGCCCCCCAAATAACACTGATAGCCCTAATTACCTATATTGCCATAACAACAGCCG CCTTCCTCACCCTAAACAATGTTGGCTCGACCAAAACTATTACCCTAACCTCCGCCTGAACTAAAGCCCC TACCCTGACCGCACTGGCCTGCCTCATTCTTCTCTCCCTAGGAGGTTTACCCCCGCTAACAGGATTCATG CCTAAATGACTAATTCTCCAGGAAGTTACCAGCCAAGGATTCCCCCTCACGGCCACCGTAATAGCCCTCA CAGCCCTATTGAGTCTTTACTTCTACCTTCGACTAAGCTACGCCATAACCCTTACCCTCTCCCCCTATAC CACTAACTCCACAGCCCCCTGACGAACCACAACTAAACAACCTTCCCTCCCCTTGTCCGCAGCCATCATT TCATCAACCTCTCTCCTCCCTCTCACCCCAACCGCCCTGGCCCTTTTAGCCTAGGGGCTTAGGATAGCAT TAAGACCATGAGCCTTCAAAGCTCCAAGCAGGAGTGAAAATCTCCTAGCCCCTGATAAGACTTGCAGGGA TTTATCCCACATCTTCTGAATGCAACCCAGACACTTTAATTAAGCTAAAGCCTTTCTAGATGGGAAGGCC TCGATCCTACAAACTCTTAGTTAACAGCTAAGCGCCCTAACCAGCGAGCATCCATCTACTTTCCCCGCCG TCCAGGAGAGAGGCGGGGAAAGCCCCGGCAGGCGGTAGCCCGCGTCTTCAGGTTTGCAACCTGACATGAA CTTCACCACAGGGCTTGTGGTAAGAAGAGGAGTTAAACCTCTGTCCTCGGAGCTACAATCCGCCGCCTAA ACCTTCGGCCATCCTACCTGTGGCAATTACACGTTGATTTTTCTCAACTAATCATAAAGATATTGGTACC CTTTACCTAGTATTTGGTGCCTGAGCAGGGATAGTAGGCACTGCCTTAAGTCTCTTAATCCGAGCCGAAC TGAGCCAACCCGGGGCGCTTCTCGGAGATGATCAGATCTATAACGTCATCGTTACGGCGCACGCCTTCGT AATAATCTTCTTCATAGTAATGCCAATTCTAATTGGCGGCTTTGGGAATTGACTGGTCCCCCTTATGATC GGGGCACCAGACATGGCATTCCCACGAATGAACAACATGAGCTTCTGACTACTTCCACCCTCATTCCTCC TCCTCCTTGCCTCCTCCGGAGTTGAGGCCGGGGCAGGAACCGGGTGAACAGTCTACCCACCTTTGGCAGG CAATCTTGCCCACGCCGGAGCATCCGTCGACCTAACTATCTTCTCTCTTCATCTAGCAGGTATTTCATCA ATTCTTGGGGCCATTAATTTTATTACCACAATCATTAATATGAAACCCCCTGCAATTTCACAATATCAAA CACCCCTATTTGTATGATCCGTGCTTGTAACGGCCGTTCTCCTTCTTCTCTCACTCCCTGTGCTAGCTGC TGGGATTACAATGCTCCTAACAGACCGAAATCTAAATACAACCTTCTTTGACCCGGCAGGGGGAGGGGAC CCAATTTTATATCAACACCTGTTCTGATTCTTCGGCCACCCGGAAGTTTATATTTTAATCCTGCCAGGAT TTGGAATGATCTCCCACATTGTAGCCTATTATTCCGGTAAAAAGGAACCTTTCGGATACATGGGAATGGT GTGAGCCATGATGGCCATCGGGCTTCTAGGGTTTATTGTATGAGCCCACCACATGTTTACCGTGGGGATA GATGTCGACACACGAGCCTACTTTACATCCGCAACAATGATTATTGCCATTCCCACCGGAGTAAAAGTCT TTAGCTGACTTGCAACTCTGCACGGGGGCTCAATCAAATGGGATACTCCCCTGCTGTGAGCTCTGGACCG CGCGTACCTCTTCACGGTCGGGGGGCTCACAGGGATTGTACTAGCCAACTCCTCCCTAGACATTGTTCTA CACGACACATACTACGTAGTAGCACACTTCCACTATGTTCTGTCAATGGGTGCTGTATTTGCCATCATGG CCGCATTCATGCACTGATTCCCACTATTTTCAGGATACACCCTTCACAGCACTTGAACAAAAATCCATTT TGGGGTTATGTTCGTAGGGGTAAATCTAACTTTCTTCCCACAACACTTCCTAGGGCTAGCCGGAATGCCA CGACGGTACTCGGACTACCCAGATGCCTATACCCTTTGAAACACGGTGTCTTCAATTGGATCACTAATCT CTTTAGTAGCAGTAATTATGTTCTTATTTATTCTTTGAGAAGCATTTGCCGCCAAACGGGAAGTATCATC AGTAGAGCTTACCATAACAAACGTAGAATGACTACACGGCTGCCCACCTCCTTACCACACCTTCGAGGAG CCGGCTTTCGTGCAAGTACAAGCAAAATAACGAGAAAGGGAGGAATCGAACCCCCGTGAGATGGTTTCAA GCCAACTGCATGGCCACTCTGCCACTTTCTTAATAAGACACTAGTAAAACGATTACCTTGCCTTGTCGAG GCAAAATTGTGGGTTAAACTCCCGCGTGTCTTAGCCTAGAGCTTAATGGAACATCCATCACGACTAGGAT TGCAGAACGCGGTCTCCCCTGTCACAGCACCACCTCTACATTACACGAACCACACCCTAATGATCGTACG CCGAAGTAGCACACTGGTTCTTTATATTATTGTGTCAATGGTTTCTACCAAACTTACTGACAAATACATT CTGGACTCCCAAGAAATTGAAATTGTGTGAACTGTCCTACCAGCAGTAATCCTTATTCTAATTGCACTTC CCTCCCTACGAATTCTTTACCTCATGGACGAGATTAACGACCCCCACCTAACTATCAAAGCCATAGGACA CCAATGATACTGAAGCTATGAATACACAGATTATGAAGACCTGGGCTTTGACTCCTACATGGTTCCCACA CAAGACCTAGTACCAGGACAATTCCGCCTACTAGAGACAGACCACCGAATGGTTGTTCCAATAGAATCCC CCATCCGAGTTCTTGTATCAGCGGAAGACGTACTTCACTCCTGAGCCGTTCCAGCACTAGGTGTAAAAAT AGACGCAGTACCAGGACGCCTAAATCAAACCGCCTTTATCGCCTCCCGTCCCGGCGTATTCTACGGGCAA TGCTCTGAAATTTGTGGTGCAAATCACAGCTTTATGCCAATTGTGGTAGAAGCTGTTCCTCTAGAACACT TTGAAAACTGATCCTCACTCATACTTGAAGACGCCTCACTAGAAAGCTAAATTGGGCCTAGCGTCAGCCT TTTAAGCTGAAGATTGGTGACCCCCAACCACCTCTAGTGATATGCCTCAATTGAACCCCGCTCCTTGATT TGCAATTCTTGTCTTCTCTTGACTAATTTTTCTAACAGTCATTCCCCCAAAAGTCCTAGCCCATAACTTC AACAATGAACCTACAACTGTAGGAGCTGAAAAAGCTAAACCTGAACCCTGAAACTGACCATGATACTAAG CTTCTTTGACCAATTCATGAGCCCCTCTTACCTGGGTATCCCCCTTATTGCAGTAGCAATCGCACTCCCA TGAACTTTATATCCCACCCCCACAACACGATGATTAAACAATCGAGTATTAACACTTCAAGGCTGATTCA TTAATCGATTTACACAACAACTTCTTCTACCTATTAACCCAGGGGGACACAAATGAGCAGTCCTGTTTAC ATCTCTAATGCTCTTCCTCATTACTATCAACATGTTAGGACTCCTCCCCTACACATTTACACCAACTACA CAGCTTTCTCTAAACATAGGCCTTGCCGTCCCTCTGTGGCTCGCCACAGTAATCATTGGCATGCGAAACC AACCTACAGCTGCCCTAGGACACCTCCTCCCCGAGGGCACCCCAGCGTCTCTTATCCCTGTACTAATTAT TATCGAAACGATTAGCCTATTTATCCGGCCCTTAGCCCTCGGGGTCCGACTAACTGCCAACCTAACAGCG GGCCACCTACTCATTCAACTAATTGCCACAGCAGCCTTTGTTCTTCTCCCAATTATGCCAACCGTGGCCA TCTTAACAGCCACAATTTTATTCCTGCTCACCCTTCTAGAAGTCGCCGTAGCAATGATTCAAGCATATGT CTTCGTCCTACTCTTAAGCCTATACCTTCATCAAGCTGTCTAATGGCCCACCAAGCACACGCATACCACA TGGTAGACCCAAGCCCCTGACCGCTCACCGGAGCAGTTGGCGCCCTGCTGCTAACATCCGGCACTGCAAT TTGATTCCGCTTCCATTCAACCCTCCTTATAACTCTAGGGCTAGTACTAACGCTCCTAACCATATACCAA TGATGACGAGACATTGTCCGAGAAGGGACCTTCCAAGGCCACCACACCCCCCCAGTTCAAAAAGGGCTGC GTTACGGAATAATCCTGTTCATTACCTCAGAAGTATTCTTCTTTGCAGGATTTTTCTGAGCCTTCTACCA CTCAAGCCTAGCACCAACCCCTGAACTAGGGGGCTGCTGACCCCCAACAGGAGTTACACCCCTAGACCCA TTCGAAGTGCCACTACTGAATACAGCCGTCCTTCTAGCCTCCGGTGTAACTGTAACATGAGCCCACCATA GCCTTATAGAAGGGGGGCGAAAGCAAGCCATCCAGTCTCTTACTCTTACAATCCTTCTAGGCTTCTACTT TACTTTCTTACAAGCCCTAGAATACTATGAAGCCCCTTTTACAATCGCAGACGGAGTGTTCGGATCAACA TTCTTTGTGGCCACAGGATTCCACGGCCTACACGTTATTATTGGGCTCACATTCCTGGCTGTCTGTCTTC TACGTCAAGTGCTCCACCACTTTACTTCAAACCACCACTTTGGATTCGAAGCCGCCGCCTGATACTGACA CTTTGTTGACGTAGTATGACTATTCCTGTACGTCTCTATCTACTGATGAGGATCATAATCTTTCTAGTAT AAAAGACAGTACAGGTGGCTTCCAACCATCTAATCTTGGTTAAAGCCCAAGGAAAGATAATGAGTCTAAT CATAACCATCCTAGCAATCACCTCCGTACTATCAATCATTTTAATCATTGTCTCCTTCTGACTACCGCAA ATAAACCCTGACGCAGAGAAACTTTCACCTTATGAGTGCGGATTTGATCCCCTAGGGTCCGCCCGCCTGC CCTTCTCCCTGCGATTCTTCCTAGTAGCCATTCTATTCTTACTATTTGACCTAGAGATCGCACTGCTACT CCCCCTCCCCTGGGGAAATCAACTGCTCAACCCACTAGTAACCGTCTCATGGGCCACCGCCATCCTTGTT CTCCTAACACTAGGTTTAGTCTATGAGTGAATGCAGGGGGGCCTTGAATGAGCCGAATAGGGAATTAGTC CAACTAAAGACTGCCAATTTCGGCTCAGACAACTATGGTTAAAGTCTATAACTCCCTTATGACCCGGGTG CACTTCAGTTTTAGCATAGCATTTATCCTAGGCCTTATAGGCCTGGCATTTCACCGAACCCACTTTCTCT TTGCTCTGCTATGTTTAGAGGGCATGATGCTATCCCTCTTCCTTGCTCTCTCTTTATGGACCCTACAAAC AGAAGCAACAAACTTCTCTGCAGCGCCCATATTACTCCTCGCCTTCTCTGCTTGCGAAGCCAGCACGGGT CTTGCCCTACTAGTGGCAACAGCCCGAACCCACGGAACAGACCGACTACAAAACCTTAACCTCCTGCAAT GTTAAAAGTGCTAATCCCAACCCTAATGCTCTTCCCAACGATTTGGTTAACGCCCAAAAAATGACTTTGG ACATCCGCCGTGTCCTACAGCCTGATTATTGCCCTGCTAAGTCTAACTTGGCTCAACTGGACAGCAGAAA CAGGATGGACCCTGCCAAACAACTATATAGCAATTGACCCCCTTTCTGCCCCCCTTCTAGTCCTAACATG TTGACTCCTCCCTCTGATAATCCTCGCAAGCCAAAACCACACACAGTCCGAACCTGCCTCCCGACAACGC ATGTACCTCAGCCTCTTGGCCTCCCTTCAAGCCTTCCTTATTATAGCATTCGGAGCCACAGAAATTATTA TGTTTTATATTATATTCGAAGCAACCCTTGTTCCCACTCTTATTATCATCACCCGATGGGGCAACCAAGC AGAGCGCCTAAATGCGGGCACCTACTTCTTATTTTACACTTTAGCAGGGTCCCTCCCACTATTAGTTGCA CTACTAACCCTACAAAATTCAACAGGAAGTTTATCAATGATTACCCTAAACTTTTGTCAGCCTTTAACTT TGATCTCCTGAGGGGACAAAATCTGATGAGCGGGCTGCTTGGTGGCATTCCTCGTAAAAATGCCCCTCTA TGGCGTCCATCTCTGACTACCAAAGGCGCACGTAGAAGCCCCTATTGCCGGATCAATAGTCCTAGCCGCA GTTTTACTAAAACTTGGGGGCTACGGCATGATTCGAATAACAACAGTCCTTGACCCCCTCACTAAAGAAA TGGCCTATCCCTTCATCGTGCTTGCCCTCTGAGGCATCATCATAACAGGATCTATCTGTTTACGCCAAAC AGACCTAAAATCACTAATCGCTTACTCCTCAGTAAGCCACATGGGGCTGGTCGCCGGAGGTATTCTTATT CAAACCCCCTGAGGCCTGACCGGAGCAATTATTTTAATAATTGCCCACGGACTAGTATCATCAGCATTGT TCTGTCTGGCAAACACAAGCTATGAACGAACACACAGCCGAACTATAGTCTTGGCACGAGGCATGCAAAT ACTGTTCCCCCTAACAGCCACATGATGGTTTATTGCCAACTTAGCCAATCTTGCACTCCCCCCACTCCCT AATCTTATGGGGGAGATCATAATCATTACAACCATATTTAACTGATCTCCTTGAACCCTAATCCTTACAG GACTCGGCACCCTGATCACAGCCGGTTACTCCCTCTACATGTTCCTAATAACCCAGCGGGGCCCGGTACC AGCACATATTACAGGATTAACCCCATATCACACACGAGAGCACCTTTTGATTGCCCTTCATTTAATTCCA GTTGTTCTACTTGTCCTCAAACCAGAGTTCATGTGAGGATGATTCTACTGCAGGTATAGTTTAACGAAAA TGTTGGATTGTGATTCCAAAGACAGGAGTTCAAACCTCCTTACCCGCCGAGAGAGGCCTGTAGCAATAGA GACTGCTAATCTCTACCCCCGCAGTTAGAATCTGCGGCTCCCTCGGGCCTTTGAGGATAACAGTCATCCG TTGGTCTTAGGAACCAAAACTTCTTGGTGCAAATCCAAGCAGAGGCTATGCAAACTACACTGATTTTATC ATCATCACTTACACTAATCTTTGCCCTCCTAGCCTACCCTATTATTACAACAATTGACCCCGCACCAAAA CCCCCCGGTTGAGCCGTATCCCACGTAAAAACCGCAGTTAGTGCCGCATTCGTGGTCAGTCTTTTACCAC TATTTATCTTCTTAGACCAGGGGGTAGAAACAATCGTCACCACCTGACACTGAATAAATACATCCACTTT CAACATTAGCATTAGCCTAAAATTCGATGCCTATTCAATTATCTTTACGCCAATTGCCCTTTACGTAACA TGATCAATCCTTGAATTTGCCTCCTGATACATACACGCAGACCCATACATGAACCGATTCTTTAAATACC TCCTCATGTTCTTAATCGCTATAATTATCCTAGTTACAGCCAACAACATATTCCAACTATTTATTGGCTG AGAAGGAGTAGGAATTATGTCCTTCCTACTAATCGGCTGATGGTACGGCCGAGCTGACGCCAACACTGCA GCCTTACAAGCCGTGATCTATAACCGAGTGGGAGACATCGGACTAATTATAAGCATGGCCTGATTTGCCA TAAATCTTAACTCATGAGAGATACAACAAATCTTTGCACTTTCTCACAACATGGACATAACCCTCCCCCT CCTAGGCCTAATCATTGCCGCAACAGGCAAGTCGGCCCAATTCGGACTTCACCCCTGACTGCCTTCCGCA ATGGAAGGTCCCACGCCAGTCTCCGCCCTACTGCACTCAAGCACAATGGTTGTAGCAGGAATCTTCCTCC TTATTCGACTACATCCTCTTACCCAAACCAACCCTACAGCACTAACCATCTGCTTGTGTCTAGGTGCACT AACAACACTATTTACCGCCACATGTGCCCTCACCCAAAATGACATCAAGAAAATCGTAGCCTTCTCTACT TCAAGCCAACTAGGACTCATAATAGTGACAATCGGACTTAATCAGCCCCAATTAGCTTTCTTCCACATTT GCACCCATGCCTTCTTCAAAGCAATACTCTTCCTCTGCTCCGGATCAGTTATCCACAGCCTTAATGACGA ACAAGACATCCGAAAAATGGGGGGCCTACACAACCTAGCACCTTTTACATCCACCTGTCTCACAATTGGA AGCCTAGCTCTAACAGGAACTCCCTTTCTGGCCGGCTTCTTCTCAAAAGATGCCATCATCGAAGCCCTAA ACACCTCCTACCTTAACGCCTGAGCCCTTGTCCTCACTCTAATTGCAACCTCTTTCACACCCGTATACAG CTTCCGAGTTGTATTTTTTGTTACCATGGGAACCCCCCGATTTACACCCCTCTCCCCAATCAACGAAAAT GACCCTGCAGTTATTAACCCAATTAAACGACTGGCCTGAGGCAGCATTGTAGCCGGGTTAATTCTTATTT CAAACACCCTCCCCACAAAAACACCCATTATGACCATGCCTCCCATACTAAAACTAGCTGCTCTTATTGT CACAATCATTGGACTTCTAACAGCCATAGAATTAGCCGCCCTCACCGCCAAACAATTCAAACCCACCCCA ACCATTAAACTACACAACTTCTCAAACATGCTCGGCTTCTTCCCCGCAACAGTACACCGCCTGGTCCCTA AACTAAACCTGGTTTTAGGCCAAACAATGGCCAACCAACTAGTAGACCAGTCATGATTTGAGACCGCAGG CCCCAAAGGACTAGTTTCAGCTCAAACGAAAATGTCCGCAGCCACTAGCGACACCCAACGAGGGATCATC AAGACATATCTAATAATCTTCATAATCACCACAGGTCTGGCCACCCTTTTAGCCTCAACCTAAACAGCCC GTAAAGTCCCCCGGCTTAAGCCACGAGTCAACTCTAATACTACAAATAAAGTTAACAATAAAACTCAAGC GCATAACACCATCATAACACCCCCTGAAGCATAAAGCATGGAAACCCCACCAACATCTCCCCGGACCATC AACAACTCTTTACAACTACTTAACACCCCGGTACTAAAACCATATCATGATGAACCAAAATAGAGCAACC CTGCAACGACTACCACAAAGTAGAACATCGCATGCTCAAAAACAGACGCGTCCCCCCAGCTTTCAGGGTG CGGATCGGCCGCCAAAGCAGCCGAATACCCAAAAACTACTAACATCCCCCCTAAGTAAATTAAGAAAAGA GCCAAGGCCAAAAACGGCAACCCAAACATTGCTAAAACAGCACAACCCGCCCCAGAAGACATCACTAACC CTAATGCCGCGAAATACGGGGCAGGATTAGATGCAACGCCCACCATCCCTAAAACAAACCCAAATAATCA GAGACACACAAAGTATACCATAATTTCTACCCGGATTCTAACCGAGACCAATGACTCGAAAAACCACCGT TGTTATTCAACTATAGAAACCCTAATGGCAAGCCTACGAAAAACCCACCCACTCATAAAAATCGCCAACG ACGCACTAGTCGACCTCCCAGCCCCTTCTAACATTTCAGTCTGATGAAACTTCGGCTCACTTTTAGGAAT GTGTTTAGCGGCACAAATTTTAACAGGACTATTCCTGGCTATACACTACACTTCTGACATCGCAACGGCA TTCTCTTCCGTCGTCCACATTTGCCGTGACGTAAACTATGGATGACTAATCCGAAGCATGCACGCAAACG GGGCATCATTCTTCTTCATCTGCATTTACGCCCACATTGGCCGAGGACTTTACTACGGCTCATACGTCTA CAAAGAGACATGAAACATTGGAGTAATCCTTCTCCTTCTTGTTATAATGACTGCCTTTGTAGGCTACGTT CTCCCCTGAGGACAAATATCTTTCTGGGGGGCCACAGTAATTACCAACTTATTATCTGCCGTCCCATATG TAGGAGGCGCACTAGTAGAATGAATCTGAGGGGGCTTCTCCGTAGATAGTGCCACTCTAACCCGATTCTT CGCATTCCACTTCCTATTCCCCTTCGTAATTGCAGGGGCCACAATCCTCCACCTCTTATTCCTACACGAA ACAGGATCAAATAACCCAGCTGGTCTTAACTCAGACGCTGATAAAATTTTATTCCACCCATACTTCTCCT ACAAAGACCTTCTAGGTTTCGCAGCTTTACTACTAGCGCTAATCTCGTTAGCCCTCTTTTCACCTAACTT GCTGGGGGACCCAGATAATTTTACACCCGCCAACCCCATGGTTACCCCACCCCACATTAAACCAGAGTGA TACTTCCTATTTGCCTACGCCATCCTACGTTCAATCCCCAACAAACTAGGTGGAGTATTAGCCCTTCTAT TCTCCATTTTAGTACTTATAGTAATTCCCATCCTGCACACCTCAAAGCATCGAGGACTAACATTCCGGCC CATTACACAGTTCCTATTCTGAGCTTTAGTACTAGACGTTGTTGTCTTAACATGAATTGGAGGAATACCA GTAGAGCACCCCTACGTCATTGCCGGACAAGTAGCCTCAGCAGCCTACTTCTCTCTGTTCTTAATTCTAA CCCCACTAGCCGGGTGAGCAGAGAACAAAGTCCTAGAATGAAACTGCCCCAGTAGCTTAGTTCTAAAGCG CCGGTTTTGTAACCCGGAGACCGGAGGTTAAAATCCTCCCTGAGGCCCAGAAAAGAAAGATTTTAACTTC CACCTCTAACTCCCAAAGCTAGTATTCTAAGTTAAACTATTCCCTGCTTGACGCGCCGACGCGCCGATAT ATGTACTTATTATATGTACTCTAGTATATAAATGTTGTATACTCATAGTATGTACAACACCCTACACAGA TGGTATAATACATACTATGTATAATTATACATATATATATGGTGTCTATACATACTATGTATAATTATAC ATATATATATGGTACTTATACATACTATGTATAATCACCATTCATATTATATCAAGTAAATAACTGTTTT ATACTTACATTCATGAATCTAAGGATAAATAAGTAATAATCAGATAATAACCCATGAAAACAAACAAGTA ATAATTAAACTAAGGTATATACAAAGCATTAAACTAAGATTCAGAATATCAATAAGAAAAGCTGATAAAT AGATTAATCCCTATTACTTCATTAAACCATTTTCCATGCGTTACCCACCAAAAATAGCTATAGACTTATT TAATGTAGTGAGAACCGACCAACACGACTAAATCGCGCATACGGTTAATGATAAGATCACGGACAAAAAT TGTGGGGGTTTCACAGAATGAACTATTCCTGGCATTTGGTTCCTATTTCAGGGCCATAAATTTATAATCC CCCTTAGAATTGAATTTTCCAGGCATAAGTTATGGTGGGGTACTAACGACTCGTTACCCACCATGCCGGG CGTTCACTTACATGCATCTGATTCTCTTCACCCCTTCACTTTCACTTGGCGTGTGGCGACTCACTTCGTA ATGTTAACGTTTAAAGGGTGAACATTTCCTTGAAATAAAGAACAATTGCCCAATACTCCATCAGCATTCA TGGAAGAATTACATAAGTGATATCAGGTGCATAATAGATCAATTCTCAACCCACCCTGCCCTATTATACT GCCCCCCTTCTTCGGAAAACTAGGAGGTTTTTTCGCGCGACAAACCCCCTTACCCCCTACGCCCGAAAAA GTCTAATATTCATGTCAAACCCCGAAACCATGAAAGACTCGACTGACGTCTTCAACGAGTTCTGTTACGT GTTGGTATATAGTGCTGCAAAAAAATGTTACTCTGTG
Contact: Vadim E. Fraifeld, MD, PhD
Head: Lab for the Biology of Aging, The Shraga Segal Department of Microbiology, Immunology and Genetics, Faculty of Health Sciences, Ben-Gurion University of the Negev
P.O. Box 653, Beer-Sheva 8410501, Israel
Email:
Head: Lab for the Biology of Aging, The Shraga Segal Department of Microbiology, Immunology and Genetics, Faculty of Health Sciences, Ben-Gurion University of the Negev
P.O. Box 653, Beer-Sheva 8410501, Israel
Email:
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If you would like to cite this database please use:
Toren D, Barzilay T, Tacutu R, Lehmann G, Muradian KK, Fraifeld VE. MitoAge: a database for comparative analysis of mitochondrial DNA, with a special focus on animal longevity. Nucleic Acids Res. 2016; 44(D1):D1262-5.
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