Viewing data for Leptotila verreauxi


Scientific name Leptotila verreauxi
Common name White-tipped dove
Maximum lifespan 8.60 years (Leptotila verreauxi@AnAge)

Total mtDNA (size: 17176 bases) GC AT G C A T
Base content (bases) 7883 9293 5499 2384 4127 5166
Base content per 1 kb (bases) 459 541 320 139 240 301
Base content (%) 45.9% 54.1%
Total protein-coding genes (size: 11367 bases) GC AT G C A T
Base content (bases) 5308 6059 3909 1399 2743 3316
Base content per 1 kb (bases) 467 533 344 123 241 292
Base content (%) 46.7% 53.3%
D-loop: No data available for this section.
Total tRNA-coding genes (size: 1541 bases) GC AT G C A T
Base content (bases) 666 875 394 272 382 493
Base content per 1 kb (bases) 432 568 256 177 248 320
Base content (%) 43.2% 56.8%
Total rRNA-coding genes (size: 2556 bases) GC AT G C A T
Base content (bases) 1191 1365 697 494 537 828
Base content per 1 kb (bases) 466 534 273 193 210 324
Base content (%) 46.6% 53.4%
12S rRNA gene (size: 969 bases) GC AT G C A T
Base content (bases) 469 500 268 201 204 296
Base content per 1 kb (bases) 484 516 277 207 211 305
Base content (%) 48.4% 51.6%
16S rRNA gene (size: 1587 bases) GC AT G C A T
Base content (bases) 722 865 429 293 333 532
Base content per 1 kb (bases) 455 545 270 185 210 335
Base content (%) 45.5% 54.5%

ATP6 (size: 683 bases) GC AT G C A T
Base content (bases) 309 374 234 75 186 188
Base content per 1 kb (bases) 452 548 343 110 272 275
Base content (%) 45.2% 54.8%
ATP8 (size: 167 bases) GC AT G C A T
Base content (bases) 66 101 57 9 43 58
Base content per 1 kb (bases) 395 605 341 54 257 347
Base content (%) 39.5% 60.5%
COX1 (size: 1551 bases) GC AT G C A T
Base content (bases) 750 801 498 252 399 402
Base content per 1 kb (bases) 484 516 321 162 257 259
Base content (%) 48.4% 51.6%
COX2 (size: 684 bases) GC AT G C A T
Base content (bases) 310 374 210 100 170 204
Base content per 1 kb (bases) 453 547 307 146 249 298
Base content (%) 45.3% 54.7%
COX3 (size: 784 bases) GC AT G C A T
Base content (bases) 378 406 253 125 196 210
Base content per 1 kb (bases) 482 518 323 159 250 268
Base content (%) 48.2% 51.8%
CYTB (size: 1143 bases) GC AT G C A T
Base content (bases) 556 587 417 139 275 312
Base content per 1 kb (bases) 486 514 365 122 241 273
Base content (%) 48.6% 51.4%
ND1 (size: 966 bases) GC AT G C A T
Base content (bases) 458 508 330 128 253 255
Base content per 1 kb (bases) 474 526 342 133 262 264
Base content (%) 47.4% 52.6%
ND2 (size: 1039 bases) GC AT G C A T
Base content (bases) 457 582 356 101 253 329
Base content per 1 kb (bases) 440 560 343 97 244 317
Base content (%) 44.0% 56.0%
ND3 (size: 351 bases) GC AT G C A T
Base content (bases) 169 182 128 41 90 92
Base content per 1 kb (bases) 481 519 365 117 256 262
Base content (%) 48.1% 51.9%
ND4 (size: 1378 bases) GC AT G C A T
Base content (bases) 626 752 483 143 342 410
Base content per 1 kb (bases) 454 546 351 104 248 298
Base content (%) 45.4% 54.6%
ND4L (size: 297 bases) GC AT G C A T
Base content (bases) 138 159 97 41 71 88
Base content per 1 kb (bases) 465 535 327 138 239 296
Base content (%) 46.5% 53.5%
ND5 (size: 1818 bases) GC AT G C A T
Base content (bases) 843 975 640 203 413 562
Base content per 1 kb (bases) 464 536 352 112 227 309
Base content (%) 46.4% 53.6%
ND6 (size: 522 bases) GC AT G C A T
Base content (bases) 252 270 208 44 57 213
Base content per 1 kb (bases) 483 517 398 84 109 408
Base content (%) 48.3% 51.7%

ATP6 (size: 683 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 8 (3.54%)
Alanine (Ala, A)
n = 17 (7.52%)
Serine (Ser, S)
n = 12 (5.31%)
Threonine (Thr, T)
n = 23 (10.18%)
Cysteine (Cys, C)
n = 1 (0.44%)
Valine (Val, V)
n = 9 (3.98%)
Leucine (Leu, L)
n = 63 (27.88%)
Isoleucine (Ile, I)
n = 17 (7.52%)
Methionine (Met, M)
n = 9 (3.98%)
Proline (Pro, P)
n = 17 (7.52%)
Phenylalanine (Phe, F)
n = 9 (3.98%)
Tyrosine (Tyr, Y)
n = 3 (1.33%)
Tryptophan (Trp, W)
n = 4 (1.77%)
Aspartic acid (Asp, D)
n = 1 (0.44%)
Glutamic acid (Glu, E)
n = 4 (1.77%)
Asparagine (Asn, N)
n = 10 (4.42%)
Glutamine (Gln, Q)
n = 8 (3.54%)
Histidine (His, H)
n = 4 (1.77%)
Lysine (Lys, K)
n = 3 (1.33%)
Arginine (Arg, R)
n = 5 (2.21%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
10 7 7 12 18 19 5 8 7 1 2 3 4 0 2 7
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
2 0 1 1 8 7 1 3 3 2 0 4 2 10 1 6
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
8 9 0 0 3 4 0 1 4 1 2 0 1 1 9 1
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
3 3 1 0 1 2 1 1 3 1 0 0 0 0 0 4
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
39 88 67 33
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
23 64 33 107
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
13 82 87 45
ATP8 (size: 167 bases)
Amino acid sequence: MPQLNPSPWFFTMLLSWLTFSLIIQPKLLQFIPTNPPINKTSTTTKTTPWTWPWT
Amino acid frequencies:
Glycine (Gly, G)
n = 0 (0%)
Alanine (Ala, A)
n = 0 (0%)
Serine (Ser, S)
n = 4 (7.41%)
Threonine (Thr, T)
n = 11 (20.37%)
Cysteine (Cys, C)
n = 0 (0%)
Valine (Val, V)
n = 0 (0%)
Leucine (Leu, L)
n = 7 (12.96%)
Isoleucine (Ile, I)
n = 4 (7.41%)
Methionine (Met, M)
n = 2 (3.7%)
Proline (Pro, P)
n = 9 (16.67%)
Phenylalanine (Phe, F)
n = 4 (7.41%)
Tyrosine (Tyr, Y)
n = 0 (0%)
Tryptophan (Trp, W)
n = 5 (9.26%)
Aspartic acid (Asp, D)
n = 0 (0%)
Glutamic acid (Glu, E)
n = 0 (0%)
Asparagine (Asn, N)
n = 3 (5.56%)
Glutamine (Gln, Q)
n = 3 (5.56%)
Histidine (His, H)
n = 0 (0%)
Lysine (Lys, K)
n = 3 (5.56%)
Arginine (Arg, R)
n = 0 (0%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
2 2 1 0 1 5 1 0 2 1 0 0 0 0 1 3
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
1 0 0 0 0 0 0 0 0 0 0 3 2 4 0 4
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
4 3 0 1 1 1 0 1 0 0 0 0 0 1 2 0
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 5
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
0 19 24 12
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
6 23 9 17
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
3 15 24 13
COX1 (size: 1551 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 47 (9.11%)
Alanine (Ala, A)
n = 48 (9.3%)
Serine (Ser, S)
n = 28 (5.43%)
Threonine (Thr, T)
n = 39 (7.56%)
Cysteine (Cys, C)
n = 1 (0.19%)
Valine (Val, V)
n = 35 (6.78%)
Leucine (Leu, L)
n = 62 (12.02%)
Isoleucine (Ile, I)
n = 40 (7.75%)
Methionine (Met, M)
n = 24 (4.65%)
Proline (Pro, P)
n = 31 (6.01%)
Phenylalanine (Phe, F)
n = 41 (7.95%)
Tyrosine (Tyr, Y)
n = 18 (3.49%)
Tryptophan (Trp, W)
n = 17 (3.29%)
Aspartic acid (Asp, D)
n = 15 (2.91%)
Glutamic acid (Glu, E)
n = 10 (1.94%)
Asparagine (Asn, N)
n = 15 (2.91%)
Glutamine (Gln, Q)
n = 9 (1.74%)
Histidine (His, H)
n = 19 (3.68%)
Lysine (Lys, K)
n = 9 (1.74%)
Arginine (Arg, R)
n = 8 (1.55%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
9 31 20 10 17 29 2 3 8 1 6 10 16 3 15 26
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
4 0 1 11 26 11 0 8 18 20 1 8 11 11 1 6
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
17 15 1 3 15 7 0 0 3 3 15 1 1 2 13 6
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
13 8 2 3 12 8 1 1 2 4 1 0 1 0 0 16
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
155 125 131 106
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
77 143 95 202
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
20 230 176 91
COX2 (size: 684 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 8 (3.52%)
Alanine (Ala, A)
n = 15 (6.61%)
Serine (Ser, S)
n = 19 (8.37%)
Threonine (Thr, T)
n = 14 (6.17%)
Cysteine (Cys, C)
n = 3 (1.32%)
Valine (Val, V)
n = 18 (7.93%)
Leucine (Leu, L)
n = 31 (13.66%)
Isoleucine (Ile, I)
n = 16 (7.05%)
Methionine (Met, M)
n = 11 (4.85%)
Proline (Pro, P)
n = 13 (5.73%)
Phenylalanine (Phe, F)
n = 9 (3.96%)
Tyrosine (Tyr, Y)
n = 8 (3.52%)
Tryptophan (Trp, W)
n = 5 (2.2%)
Aspartic acid (Asp, D)
n = 14 (6.17%)
Glutamic acid (Glu, E)
n = 14 (6.17%)
Asparagine (Asn, N)
n = 4 (1.76%)
Glutamine (Gln, Q)
n = 7 (3.08%)
Histidine (His, H)
n = 9 (3.96%)
Lysine (Lys, K)
n = 4 (1.76%)
Arginine (Arg, R)
n = 5 (2.2%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
5 11 9 4 7 14 2 4 6 1 8 6 4 0 3 6
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
2 2 1 1 9 5 0 0 2 5 1 1 4 8 0 2
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
6 6 0 3 8 5 1 0 2 0 8 0 0 3 1 3
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
6 13 1 3 11 4 0 0 2 3 0 0 0 1 0 5
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
69 61 51 47
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
23 59 61 85
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
8 90 92 38
COX3 (size: 784 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 20 (7.69%)
Alanine (Ala, A)
n = 23 (8.85%)
Serine (Ser, S)
n = 20 (7.69%)
Threonine (Thr, T)
n = 19 (7.31%)
Cysteine (Cys, C)
n = 1 (0.38%)
Valine (Val, V)
n = 13 (5.0%)
Leucine (Leu, L)
n = 35 (13.46%)
Isoleucine (Ile, I)
n = 16 (6.15%)
Methionine (Met, M)
n = 8 (3.08%)
Proline (Pro, P)
n = 12 (4.62%)
Phenylalanine (Phe, F)
n = 24 (9.23%)
Tyrosine (Tyr, Y)
n = 11 (4.23%)
Tryptophan (Trp, W)
n = 12 (4.62%)
Aspartic acid (Asp, D)
n = 4 (1.54%)
Glutamic acid (Glu, E)
n = 8 (3.08%)
Asparagine (Asn, N)
n = 4 (1.54%)
Glutamine (Gln, Q)
n = 7 (2.69%)
Histidine (His, H)
n = 16 (6.15%)
Lysine (Lys, K)
n = 3 (1.15%)
Arginine (Arg, R)
n = 5 (1.92%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
4 12 6 1 10 17 2 4 6 1 2 6 5 0 3 21
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
2 0 1 2 11 9 1 4 6 6 4 3 3 6 0 1
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
8 9 1 3 5 6 0 0 6 3 8 0 1 1 3 4
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
12 8 0 1 3 2 1 0 0 5 0 0 0 0 0 12
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
68 70 56 67
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
44 68 53 96
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
13 115 101 32
CYTB (size: 1143 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 25 (6.58%)
Alanine (Ala, A)
n = 25 (6.58%)
Serine (Ser, S)
n = 23 (6.05%)
Threonine (Thr, T)
n = 32 (8.42%)
Cysteine (Cys, C)
n = 4 (1.05%)
Valine (Val, V)
n = 14 (3.68%)
Leucine (Leu, L)
n = 67 (17.63%)
Isoleucine (Ile, I)
n = 32 (8.42%)
Methionine (Met, M)
n = 7 (1.84%)
Proline (Pro, P)
n = 25 (6.58%)
Phenylalanine (Phe, F)
n = 28 (7.37%)
Tyrosine (Tyr, Y)
n = 13 (3.42%)
Tryptophan (Trp, W)
n = 11 (2.89%)
Aspartic acid (Asp, D)
n = 6 (1.58%)
Glutamic acid (Glu, E)
n = 7 (1.84%)
Asparagine (Asn, N)
n = 21 (5.53%)
Glutamine (Gln, Q)
n = 8 (2.11%)
Histidine (His, H)
n = 14 (3.68%)
Lysine (Lys, K)
n = 10 (2.63%)
Arginine (Arg, R)
n = 8 (2.11%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
6 26 6 3 20 34 2 7 5 3 0 6 7 1 6 22
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
1 0 4 1 18 6 0 3 11 9 2 4 13 8 0 3
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
17 12 0 2 15 4 1 1 0 3 10 0 1 1 20 5
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
9 7 0 1 5 9 1 1 3 3 1 0 0 1 0 11
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
77 114 103 87
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
49 104 80 148
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
13 199 129 40
ND1 (size: 966 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 13 (4.05%)
Alanine (Ala, A)
n = 31 (9.66%)
Serine (Ser, S)
n = 29 (9.03%)
Threonine (Thr, T)
n = 20 (6.23%)
Cysteine (Cys, C)
n = 1 (0.31%)
Valine (Val, V)
n = 13 (4.05%)
Leucine (Leu, L)
n = 63 (19.63%)
Isoleucine (Ile, I)
n = 26 (8.1%)
Methionine (Met, M)
n = 13 (4.05%)
Proline (Pro, P)
n = 23 (7.17%)
Phenylalanine (Phe, F)
n = 17 (5.3%)
Tyrosine (Tyr, Y)
n = 14 (4.36%)
Tryptophan (Trp, W)
n = 8 (2.49%)
Aspartic acid (Asp, D)
n = 4 (1.25%)
Glutamic acid (Glu, E)
n = 11 (3.43%)
Asparagine (Asn, N)
n = 12 (3.74%)
Glutamine (Gln, Q)
n = 5 (1.56%)
Histidine (His, H)
n = 3 (0.93%)
Lysine (Lys, K)
n = 7 (2.18%)
Arginine (Arg, R)
n = 8 (2.49%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
13 13 9 7 21 27 5 2 4 1 1 2 10 0 3 14
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
4 0 1 7 12 11 1 1 6 2 4 4 11 8 0 2
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
11 7 0 4 12 6 2 1 4 6 8 1 1 2 10 0
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
3 10 1 1 3 7 0 2 2 4 0 1 0 0 0 7
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
72 99 84 67
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
36 98 56 132
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
20 133 115 54
ND2 (size: 1039 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 13 (3.77%)
Alanine (Ala, A)
n = 26 (7.54%)
Serine (Ser, S)
n = 25 (7.25%)
Threonine (Thr, T)
n = 52 (15.07%)
Cysteine (Cys, C)
n = 1 (0.29%)
Valine (Val, V)
n = 10 (2.9%)
Leucine (Leu, L)
n = 67 (19.42%)
Isoleucine (Ile, I)
n = 29 (8.41%)
Methionine (Met, M)
n = 18 (5.22%)
Proline (Pro, P)
n = 21 (6.09%)
Phenylalanine (Phe, F)
n = 14 (4.06%)
Tyrosine (Tyr, Y)
n = 7 (2.03%)
Tryptophan (Trp, W)
n = 10 (2.9%)
Aspartic acid (Asp, D)
n = 1 (0.29%)
Glutamic acid (Glu, E)
n = 4 (1.16%)
Asparagine (Asn, N)
n = 13 (3.77%)
Glutamine (Gln, Q)
n = 9 (2.61%)
Histidine (His, H)
n = 10 (2.9%)
Lysine (Lys, K)
n = 13 (3.77%)
Arginine (Arg, R)
n = 3 (0.87%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
5 24 16 8 21 22 4 11 7 2 1 4 5 0 2 12
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
2 0 1 8 8 9 1 3 3 5 2 5 4 12 0 9
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
25 18 0 2 6 13 0 1 3 1 6 3 1 3 10 1
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
9 4 0 0 1 12 1 0 1 2 0 0 0 0 0 7
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
54 98 129 65
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
31 120 57 138
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
16 138 143 49
ND3 (size: 1039 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 13 (3.77%)
Alanine (Ala, A)
n = 26 (7.54%)
Serine (Ser, S)
n = 25 (7.25%)
Threonine (Thr, T)
n = 52 (15.07%)
Cysteine (Cys, C)
n = 1 (0.29%)
Valine (Val, V)
n = 10 (2.9%)
Leucine (Leu, L)
n = 67 (19.42%)
Isoleucine (Ile, I)
n = 29 (8.41%)
Methionine (Met, M)
n = 18 (5.22%)
Proline (Pro, P)
n = 21 (6.09%)
Phenylalanine (Phe, F)
n = 14 (4.06%)
Tyrosine (Tyr, Y)
n = 7 (2.03%)
Tryptophan (Trp, W)
n = 10 (2.9%)
Aspartic acid (Asp, D)
n = 1 (0.29%)
Glutamic acid (Glu, E)
n = 4 (1.16%)
Asparagine (Asn, N)
n = 13 (3.77%)
Glutamine (Gln, Q)
n = 9 (2.61%)
Histidine (His, H)
n = 10 (2.9%)
Lysine (Lys, K)
n = 13 (3.77%)
Arginine (Arg, R)
n = 3 (0.87%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
5 24 16 8 21 22 4 11 7 2 1 4 5 0 2 12
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
2 0 1 8 8 9 1 3 3 5 2 5 4 12 0 9
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
25 18 0 2 6 13 0 1 3 1 6 3 1 3 10 1
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
9 4 0 0 1 12 1 0 1 2 0 0 0 0 0 7
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
54 98 129 65
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
31 120 57 138
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
16 138 143 49
ND4 (size: 1378 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 18 (3.93%)
Alanine (Ala, A)
n = 30 (6.55%)
Serine (Ser, S)
n = 40 (8.73%)
Threonine (Thr, T)
n = 45 (9.83%)
Cysteine (Cys, C)
n = 3 (0.66%)
Valine (Val, V)
n = 10 (2.18%)
Leucine (Leu, L)
n = 98 (21.4%)
Isoleucine (Ile, I)
n = 42 (9.17%)
Methionine (Met, M)
n = 28 (6.11%)
Proline (Pro, P)
n = 28 (6.11%)
Phenylalanine (Phe, F)
n = 15 (3.28%)
Tyrosine (Tyr, Y)
n = 13 (2.84%)
Tryptophan (Trp, W)
n = 12 (2.62%)
Aspartic acid (Asp, D)
n = 3 (0.66%)
Glutamic acid (Glu, E)
n = 8 (1.75%)
Asparagine (Asn, N)
n = 15 (3.28%)
Glutamine (Gln, Q)
n = 12 (2.62%)
Histidine (His, H)
n = 17 (3.71%)
Lysine (Lys, K)
n = 11 (2.4%)
Arginine (Arg, R)
n = 11 (2.4%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
16 26 25 9 29 52 4 4 8 4 3 6 1 0 3 12
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
3 1 2 4 12 14 0 3 10 5 0 4 18 5 1 9
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
19 16 1 7 8 13 0 1 11 3 10 1 0 2 13 7
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
10 7 1 1 2 9 2 0 2 8 1 0 0 0 0 11
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
69 162 153 75
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
56 131 79 193
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
18 190 178 73
ND4L (size: 297 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 5 (5.1%)
Alanine (Ala, A)
n = 10 (10.2%)
Serine (Ser, S)
n = 12 (12.24%)
Threonine (Thr, T)
n = 6 (6.12%)
Cysteine (Cys, C)
n = 3 (3.06%)
Valine (Val, V)
n = 4 (4.08%)
Leucine (Leu, L)
n = 22 (22.45%)
Isoleucine (Ile, I)
n = 3 (3.06%)
Methionine (Met, M)
n = 6 (6.12%)
Proline (Pro, P)
n = 2 (2.04%)
Phenylalanine (Phe, F)
n = 5 (5.1%)
Tyrosine (Tyr, Y)
n = 2 (2.04%)
Tryptophan (Trp, W)
n = 1 (1.02%)
Aspartic acid (Asp, D)
n = 1 (1.02%)
Glutamic acid (Glu, E)
n = 3 (3.06%)
Asparagine (Asn, N)
n = 3 (3.06%)
Glutamine (Gln, Q)
n = 2 (2.04%)
Histidine (His, H)
n = 6 (6.12%)
Lysine (Lys, K)
n = 0 (0%)
Arginine (Arg, R)
n = 2 (2.04%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
1 2 5 1 3 13 1 4 2 0 0 0 3 1 1 4
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
1 2 1 0 7 3 0 0 3 2 0 0 1 1 0 0
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
3 3 0 0 2 7 0 1 2 0 2 0 0 0 3 0
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
6 3 0 0 1 0 0 0 0 1 1 0 0 1 0 1
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
23 30 21 25
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
14 27 18 40
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
4 40 49 6
ND5 (size: 1818 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 31 (5.12%)
Alanine (Ala, A)
n = 47 (7.77%)
Serine (Ser, S)
n = 49 (8.1%)
Threonine (Thr, T)
n = 77 (12.73%)
Cysteine (Cys, C)
n = 5 (0.83%)
Valine (Val, V)
n = 13 (2.15%)
Leucine (Leu, L)
n = 109 (18.02%)
Isoleucine (Ile, I)
n = 56 (9.26%)
Methionine (Met, M)
n = 27 (4.46%)
Proline (Pro, P)
n = 31 (5.12%)
Phenylalanine (Phe, F)
n = 27 (4.46%)
Tyrosine (Tyr, Y)
n = 12 (1.98%)
Tryptophan (Trp, W)
n = 11 (1.82%)
Aspartic acid (Asp, D)
n = 7 (1.16%)
Glutamic acid (Glu, E)
n = 14 (2.31%)
Asparagine (Asn, N)
n = 27 (4.46%)
Glutamine (Gln, Q)
n = 19 (3.14%)
Histidine (His, H)
n = 14 (2.31%)
Lysine (Lys, K)
n = 21 (3.47%)
Arginine (Arg, R)
n = 8 (1.32%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
22 34 20 13 32 49 6 8 16 3 2 5 6 0 8 19
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
7 2 3 5 27 15 0 2 14 13 2 5 11 15 0 7
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
44 25 1 2 23 13 0 1 10 1 11 3 1 5 22 1
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
13 13 1 1 6 21 0 2 1 5 0 1 0 0 0 8
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
112 172 220 102
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
67 193 114 232
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
24 275 228 79
ND6 (size: 522 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 30 (17.34%)
Alanine (Ala, A)
n = 9 (5.2%)
Serine (Ser, S)
n = 12 (6.94%)
Threonine (Thr, T)
n = 4 (2.31%)
Cysteine (Cys, C)
n = 3 (1.73%)
Valine (Val, V)
n = 35 (20.23%)
Leucine (Leu, L)
n = 25 (14.45%)
Isoleucine (Ile, I)
n = 3 (1.73%)
Methionine (Met, M)
n = 8 (4.62%)
Proline (Pro, P)
n = 4 (2.31%)
Phenylalanine (Phe, F)
n = 15 (8.67%)
Tyrosine (Tyr, Y)
n = 7 (4.05%)
Tryptophan (Trp, W)
n = 4 (2.31%)
Aspartic acid (Asp, D)
n = 4 (2.31%)
Glutamic acid (Glu, E)
n = 3 (1.73%)
Asparagine (Asn, N)
n = 1 (0.58%)
Glutamine (Gln, Q)
n = 0 (0%)
Histidine (His, H)
n = 0 (0%)
Lysine (Lys, K)
n = 1 (0.58%)
Arginine (Arg, R)
n = 5 (2.89%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
3 0 0 1 0 1 2 6 0 0 12 2 5 16 15 0
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
8 3 0 0 1 1 7 7 0 3 20 2 0 1 1 3
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
0 1 0 6 0 1 3 2 0 6 1 3 15 1 0 0
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
0 0 3 4 0 0 1 1 0 1 3 0 0 0 1 1
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
81 13 19 61
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
44 27 17 86
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
83 4 21 66
Total protein-coding genes (size: 11382 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 223 (5.88%)
Alanine (Ala, A)
n = 289 (7.63%)
Serine (Ser, S)
n = 281 (7.41%)
Threonine (Thr, T)
n = 349 (9.21%)
Cysteine (Cys, C)
n = 27 (0.71%)
Valine (Val, V)
n = 176 (4.64%)
Leucine (Leu, L)
n = 680 (17.94%)
Isoleucine (Ile, I)
n = 293 (7.73%)
Methionine (Met, M)
n = 165 (4.35%)
Proline (Pro, P)
n = 223 (5.88%)
Phenylalanine (Phe, F)
n = 216 (5.7%)
Tyrosine (Tyr, Y)
n = 110 (2.9%)
Tryptophan (Trp, W)
n = 105 (2.77%)
Aspartic acid (Asp, D)
n = 63 (1.66%)
Glutamic acid (Glu, E)
n = 92 (2.43%)
Asparagine (Asn, N)
n = 131 (3.46%)
Glutamine (Gln, Q)
n = 93 (2.45%)
Histidine (His, H)
n = 112 (2.96%)
Lysine (Lys, K)
n = 86 (2.27%)
Arginine (Arg, R)
n = 70 (1.85%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
96 197 127 72 191 298 36 61 75 18 38 50 67 21 64 152
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
38 10 17 42 144 92 11 34 78 75 36 44 82 93 4 52
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
167 126 4 35 102 80 8 10 46 27 83 13 22 23 108 28
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
84 82 10 15 48 78 8 8 16 39 7 2 1 3 1 92
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
843 1095 1083 770
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
484 1086 691 1530
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
238 1565 1390 598 

Error: F​a​i​l​e​d​ t​o​ u​n​d​e​r​s​t​a​n​d​ i​d​:​ ?​t​e​r​m​=​(​"​L​e​p​t​o​t​i​l​a​
F​a​i​l​e​d​ t​o​ u​n​d​e​r​s​t​a​n​d​ i​d​:​ v​e​r​r​e​a​u​x​i​"​[​O​r​g​a​n​i​s​m​]​)​
F​a​i​l​e​d​ t​o​ u​n​d​e​r​s​t​a​n​d​ i​d​:​ A​N​D​
F​a​i​l​e​d​ t​o​ u​n​d​e​r​s​t​a​n​d​ i​d​:​ (​r​e​f​s​e​q​[​f​i​l​t​e​r​]​
F​a​i​l​e​d​ t​o​ u​n​d​e​r​s​t​a​n​d​ i​d​:​ A​N​D​
F​a​i​l​e​d​ t​o​ u​n​d​e​r​s​t​a​n​d​ i​d​:​ m​i​t​o​c​h​o​n​d​r​i​o​n​[​f​i​l​t​e​r​]​)​
Contact: Vadim E. Fraifeld, MD, PhD

Head: Lab for the Biology of Aging, The Shraga Segal Department of Microbiology, Immunology and Genetics, Faculty of Health Sciences, Ben-Gurion University of the Negev
P.O. Box 653, Beer-Sheva 8410501, Israel

Email:
How to cite us:

If you would like to cite this database please use:
Toren D, Barzilay T, Tacutu R, Lehmann G, Muradian KK, Fraifeld VE. MitoAge: a database for comparative analysis of mitochondrial DNA, with a special focus on animal longevity. Nucleic Acids Res. 2016; 44(D1):D1262-5.