Viewing data for Oncorhynchus clarkii
| Scientific name | Oncorhynchus clarkii |
| Common name | Cutthroat trout |
| Maximum lifespan | 10.00 years (Oncorhynchus clarkii@AnAge) |
| Total mtDNA (size: 16658 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 7680 | 8978 | 4817 | 2863 | 4365 | 4613 |
| Base content per 1 kb (bases) | 461 | 539 | 289 | 172 | 262 | 277 |
| Base content (%) | 46.1% | 53.9% | ||||
| Total protein-coding genes (size: 11412 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 5260 | 6152 | 3482 | 1778 | 3149 | 3003 |
| Base content per 1 kb (bases) | 461 | 539 | 305 | 156 | 276 | 263 |
| Base content (%) | 46.1% | 53.9% | ||||
| D-loop (size: 1003 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 387 | 616 | 235 | 152 | 307 | 309 |
| Base content per 1 kb (bases) | 386 | 614 | 234 | 152 | 306 | 308 |
| Base content (%) | 38.6% | 61.4% | ||||
| Total tRNA-coding genes (size: 1552 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 711 | 841 | 398 | 313 | 382 | 459 |
| Base content per 1 kb (bases) | 458 | 542 | 256 | 202 | 246 | 296 |
| Base content (%) | 45.8% | 54.2% | ||||
| Total rRNA-coding genes (size: 2624 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 1279 | 1345 | 679 | 600 | 514 | 831 |
| Base content per 1 kb (bases) | 487 | 513 | 259 | 229 | 196 | 317 |
| Base content (%) | 48.7% | 51.3% | ||||
| 12S rRNA gene (size: 947 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 474 | 473 | 259 | 215 | 186 | 287 |
| Base content per 1 kb (bases) | 501 | 499 | 273 | 227 | 196 | 303 |
| Base content (%) | 50.1% | 49.9% | ||||
| 16S rRNA gene (size: 1677 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 805 | 872 | 420 | 385 | 328 | 544 |
| Base content per 1 kb (bases) | 480 | 520 | 250 | 230 | 196 | 324 |
| Base content (%) | 48.0% | 52.0% | ||||
| ATP6 (size: 684 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 310 | 374 | 217 | 93 | 202 | 172 |
| Base content per 1 kb (bases) | 453 | 547 | 317 | 136 | 295 | 251 |
| Base content (%) | 45.3% | 54.7% | ||||
| ATP8 (size: 168 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 75 | 93 | 54 | 21 | 43 | 50 |
| Base content per 1 kb (bases) | 446 | 554 | 321 | 125 | 256 | 298 |
| Base content (%) | 44.6% | 55.4% | ||||
| COX1 (size: 1551 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 698 | 853 | 417 | 281 | 464 | 389 |
| Base content per 1 kb (bases) | 450 | 550 | 269 | 181 | 299 | 251 |
| Base content (%) | 45.0% | 55.0% | ||||
| COX2 (size: 691 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 304 | 387 | 190 | 114 | 197 | 190 |
| Base content per 1 kb (bases) | 440 | 560 | 275 | 165 | 285 | 275 |
| Base content (%) | 44.0% | 56.0% | ||||
| COX3 (size: 785 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 364 | 421 | 229 | 135 | 232 | 189 |
| Base content per 1 kb (bases) | 464 | 536 | 292 | 172 | 296 | 241 |
| Base content (%) | 46.4% | 53.6% | ||||
| CYTB (size: 1141 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 524 | 617 | 344 | 180 | 338 | 279 |
| Base content per 1 kb (bases) | 459 | 541 | 301 | 158 | 296 | 245 |
| Base content (%) | 45.9% | 54.1% | ||||
| ND1 (size: 975 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 468 | 507 | 299 | 169 | 277 | 230 |
| Base content per 1 kb (bases) | 480 | 520 | 307 | 173 | 284 | 236 |
| Base content (%) | 48.0% | 52.0% | ||||
| ND2 (size: 1050 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 485 | 565 | 345 | 140 | 277 | 288 |
| Base content per 1 kb (bases) | 462 | 538 | 329 | 133 | 264 | 274 |
| Base content (%) | 46.2% | 53.8% | ||||
| ND3 (size: 350 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 160 | 190 | 110 | 50 | 103 | 87 |
| Base content per 1 kb (bases) | 457 | 543 | 314 | 143 | 294 | 249 |
| Base content (%) | 45.7% | 54.3% | ||||
| ND4 (size: 1381 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 627 | 754 | 419 | 208 | 387 | 367 |
| Base content per 1 kb (bases) | 454 | 546 | 303 | 151 | 280 | 266 |
| Base content (%) | 45.4% | 54.6% | ||||
| ND4L (size: 297 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 147 | 150 | 97 | 50 | 80 | 70 |
| Base content per 1 kb (bases) | 495 | 505 | 327 | 168 | 269 | 236 |
| Base content (%) | 49.5% | 50.5% | ||||
| ND5 (size: 1839 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 838 | 1001 | 575 | 263 | 485 | 516 |
| Base content per 1 kb (bases) | 456 | 544 | 313 | 143 | 264 | 281 |
| Base content (%) | 45.6% | 54.4% | ||||
| ND6 (size: 522 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 265 | 257 | 189 | 76 | 70 | 187 |
| Base content per 1 kb (bases) | 508 | 492 | 362 | 146 | 134 | 358 |
| Base content (%) | 50.8% | 49.2% | ||||
| ATP6 (size: 684 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
Amino acid frequencies:
Glycine (Gly, G)
n = 11 (4.85%) 
Alanine (Ala, A)
n = 19 (8.37%) 
Serine (Ser, S)
n = 8 (3.52%) 
Threonine (Thr, T)
n = 22 (9.69%) 
Cysteine (Cys, C)
n = 0 (0%) 
Valine (Val, V)
n = 13 (5.73%) 
Leucine (Leu, L)
n = 54 (23.79%) 
Isoleucine (Ile, I)
n = 20 (8.81%) 
Methionine (Met, M)
n = 9 (3.96%) 
Proline (Pro, P)
n = 17 (7.49%) 
Phenylalanine (Phe, F)
n = 12 (5.29%) 
Tyrosine (Tyr, Y)
n = 4 (1.76%) 
Tryptophan (Trp, W)
n = 5 (2.2%) 
Aspartic acid (Asp, D)
n = 1 (0.44%) 
Glutamic acid (Glu, E)
n = 4 (1.76%) 
Asparagine (Asn, N)
n = 9 (3.96%) 
Glutamine (Gln, Q)
n = 9 (3.96%) 
Histidine (His, H)
n = 3 (1.32%) 
Lysine (Lys, K)
n = 1 (0.44%) 
Arginine (Arg, R)
n = 6 (2.64%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 8 | 12 | 5 | 13 | 11 | 18 | 5 | 6 | 8 | 1 | 4 | 3 | 6 | 0 | 8 | 4 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 4 | 0 | 0 | 5 | 8 | 5 | 1 | 4 | 5 | 2 | 0 | 6 | 4 | 6 | 1 | 4 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 8 | 9 | 1 | 2 | 2 | 0 | 0 | 0 | 4 | 2 | 2 | 2 | 1 | 4 | 5 | 1 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 2 | 2 | 2 | 0 | 1 | 0 | 1 | 0 | 2 | 4 | 0 | 0 | 0 | 1 | 0 | 3 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 48 | 82 | 65 | 33 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 26 | 62 | 32 | 108 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 19 | 73 | 75 | 61 | ||||||||||||
| ATP8 (size: 168 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: MPQLNPAPWFAILVFSWLVFLTVIPPKVLGHTFTNEPTSQSTEKAKPEPWNWPWH* | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 1 (1.82%)
Alanine (Ala, A)
n = 3 (5.45%)
Serine (Ser, S)
n = 3 (5.45%)
Threonine (Thr, T)
n = 5 (9.09%)
Cysteine (Cys, C)
n = 0 (0%)
Valine (Val, V)
n = 4 (7.27%)
Leucine (Leu, L)
n = 5 (9.09%)
Isoleucine (Ile, I)
n = 2 (3.64%)
Methionine (Met, M)
n = 1 (1.82%)
Proline (Pro, P)
n = 9 (16.36%)
Phenylalanine (Phe, F)
n = 4 (7.27%)
Tyrosine (Tyr, Y)
n = 0 (0%)
Tryptophan (Trp, W)
n = 5 (9.09%)
Aspartic acid (Asp, D)
n = 0 (0%)
Glutamic acid (Glu, E)
n = 3 (5.45%)
Asparagine (Asn, N)
n = 3 (5.45%)
Glutamine (Gln, Q)
n = 2 (3.64%)
Histidine (His, H)
n = 2 (3.64%)
Lysine (Lys, K)
n = 3 (5.45%)
Arginine (Arg, R)
n = 0 (0%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 2 | 0 | 0 | 0 | 2 | 1 | 1 | 1 | 2 | 0 | 2 | 1 | 1 | 0 | 1 | 3 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 1 | 0 | 0 | 2 | 1 | 0 | 0 | 0 | 1 | 0 | 0 | 3 | 4 | 2 | 0 | 3 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 1 | 1 | 0 | 0 | 0 | 2 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 1 | 2 | 0 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 2 | 2 | 1 | 0 | 0 | 3 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 5 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 11 | 17 | 15 | 13 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 7 | 19 | 14 | 16 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 3 | 18 | 21 | 14 | ||||||||||||
| COX1 (size: 1551 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 47 (9.11%)
Alanine (Ala, A)
n = 47 (9.11%)
Serine (Ser, S)
n = 30 (5.81%)
Threonine (Thr, T)
n = 36 (6.98%)
Cysteine (Cys, C)
n = 1 (0.19%)
Valine (Val, V)
n = 40 (7.75%)
Leucine (Leu, L)
n = 62 (12.02%)
Isoleucine (Ile, I)
n = 41 (7.95%)
Methionine (Met, M)
n = 24 (4.65%)
Proline (Pro, P)
n = 28 (5.43%)
Phenylalanine (Phe, F)
n = 42 (8.14%)
Tyrosine (Tyr, Y)
n = 18 (3.49%)
Tryptophan (Trp, W)
n = 17 (3.29%)
Aspartic acid (Asp, D)
n = 14 (2.71%)
Glutamic acid (Glu, E)
n = 11 (2.13%)
Asparagine (Asn, N)
n = 15 (2.91%)
Glutamine (Gln, Q)
n = 8 (1.55%)
Histidine (His, H)
n = 19 (3.68%)
Lysine (Lys, K)
n = 8 (1.55%)
Arginine (Arg, R)
n = 8 (1.55%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 23 | 18 | 16 | 14 | 12 | 17 | 4 | 14 | 5 | 3 | 10 | 9 | 14 | 7 | 23 | 19 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 8 | 0 | 1 | 15 | 20 | 11 | 1 | 6 | 15 | 19 | 7 | 6 | 8 | 10 | 4 | 10 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 10 | 13 | 3 | 6 | 10 | 8 | 1 | 1 | 4 | 6 | 12 | 1 | 1 | 4 | 11 | 8 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 11 | 9 | 2 | 3 | 11 | 8 | 0 | 1 | 0 | 5 | 2 | 0 | 0 | 1 | 0 | 16 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 159 | 110 | 129 | 119 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 78 | 136 | 94 | 209 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 44 | 171 | 166 | 136 | ||||||||||||
| COX2 (size: 691 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 9 (3.93%)
Alanine (Ala, A)
n = 17 (7.42%)
Serine (Ser, S)
n = 16 (6.99%)
Threonine (Thr, T)
n = 10 (4.37%)
Cysteine (Cys, C)
n = 2 (0.87%)
Valine (Val, V)
n = 22 (9.61%)
Leucine (Leu, L)
n = 28 (12.23%)
Isoleucine (Ile, I)
n = 17 (7.42%)
Methionine (Met, M)
n = 12 (5.24%)
Proline (Pro, P)
n = 14 (6.11%)
Phenylalanine (Phe, F)
n = 8 (3.49%)
Tyrosine (Tyr, Y)
n = 9 (3.93%)
Tryptophan (Trp, W)
n = 5 (2.18%)
Aspartic acid (Asp, D)
n = 13 (5.68%)
Glutamic acid (Glu, E)
n = 15 (6.55%)
Asparagine (Asn, N)
n = 4 (1.75%)
Glutamine (Gln, Q)
n = 8 (3.49%)
Histidine (His, H)
n = 10 (4.37%)
Lysine (Lys, K)
n = 5 (2.18%)
Arginine (Arg, R)
n = 6 (2.62%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 6 | 11 | 9 | 13 | 6 | 4 | 0 | 4 | 8 | 0 | 8 | 7 | 6 | 1 | 2 | 6 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 3 | 1 | 1 | 3 | 6 | 6 | 2 | 3 | 1 | 3 | 2 | 6 | 5 | 2 | 1 | 5 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 2 | 3 | 0 | 5 | 5 | 3 | 0 | 1 | 2 | 4 | 5 | 0 | 1 | 1 | 3 | 3 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 7 | 12 | 3 | 5 | 8 | 5 | 0 | 1 | 0 | 5 | 0 | 0 | 0 | 0 | 0 | 5 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 76 | 61 | 51 | 42 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 25 | 54 | 64 | 87 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 13 | 75 | 75 | 67 | ||||||||||||
| COX3 (size: 785 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 22 (8.46%)
Alanine (Ala, A)
n = 21 (8.08%)
Serine (Ser, S)
n = 12 (4.62%)
Threonine (Thr, T)
n = 25 (9.62%)
Cysteine (Cys, C)
n = 2 (0.77%)
Valine (Val, V)
n = 17 (6.54%)
Leucine (Leu, L)
n = 33 (12.69%)
Isoleucine (Ile, I)
n = 14 (5.38%)
Methionine (Met, M)
n = 6 (2.31%)
Proline (Pro, P)
n = 12 (4.62%)
Phenylalanine (Phe, F)
n = 24 (9.23%)
Tyrosine (Tyr, Y)
n = 12 (4.62%)
Tryptophan (Trp, W)
n = 12 (4.62%)
Aspartic acid (Asp, D)
n = 5 (1.92%)
Glutamic acid (Glu, E)
n = 10 (3.85%)
Asparagine (Asn, N)
n = 2 (0.77%)
Glutamine (Gln, Q)
n = 9 (3.46%)
Histidine (His, H)
n = 16 (6.15%)
Lysine (Lys, K)
n = 2 (0.77%)
Arginine (Arg, R)
n = 5 (1.92%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 10 | 4 | 2 | 9 | 4 | 11 | 3 | 6 | 9 | 0 | 5 | 6 | 5 | 1 | 12 | 12 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 4 | 0 | 2 | 6 | 8 | 6 | 1 | 8 | 10 | 4 | 0 | 2 | 7 | 1 | 2 | 7 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 9 | 8 | 1 | 5 | 1 | 3 | 0 | 0 | 3 | 1 | 11 | 1 | 0 | 2 | 0 | 4 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 12 | 8 | 2 | 1 | 4 | 2 | 0 | 0 | 0 | 4 | 1 | 0 | 0 | 0 | 0 | 11 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 75 | 69 | 52 | 65 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 44 | 67 | 56 | 94 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 16 | 93 | 80 | 72 | ||||||||||||
| CYTB (size: 1141 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 27 (7.12%)
Alanine (Ala, A)
n = 36 (9.5%)
Serine (Ser, S)
n = 23 (6.07%)
Threonine (Thr, T)
n = 21 (5.54%)
Cysteine (Cys, C)
n = 4 (1.06%)
Valine (Val, V)
n = 26 (6.86%)
Leucine (Leu, L)
n = 58 (15.3%)
Isoleucine (Ile, I)
n = 28 (7.39%)
Methionine (Met, M)
n = 10 (2.64%)
Proline (Pro, P)
n = 21 (5.54%)
Phenylalanine (Phe, F)
n = 30 (7.92%)
Tyrosine (Tyr, Y)
n = 14 (3.69%)
Tryptophan (Trp, W)
n = 13 (3.43%)
Aspartic acid (Asp, D)
n = 11 (2.9%)
Glutamic acid (Glu, E)
n = 5 (1.32%)
Asparagine (Asn, N)
n = 17 (4.49%)
Glutamine (Gln, Q)
n = 7 (1.85%)
Histidine (His, H)
n = 12 (3.17%)
Lysine (Lys, K)
n = 9 (2.37%)
Arginine (Arg, R)
n = 8 (2.11%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 15 | 13 | 7 | 14 | 16 | 19 | 2 | 7 | 7 | 0 | 6 | 8 | 12 | 0 | 10 | 20 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 3 | 2 | 2 | 7 | 21 | 8 | 0 | 2 | 8 | 10 | 7 | 6 | 6 | 8 | 1 | 6 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 9 | 6 | 0 | 7 | 6 | 7 | 2 | 1 | 0 | 3 | 11 | 5 | 0 | 6 | 11 | 5 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 7 | 4 | 1 | 5 | 6 | 8 | 1 | 0 | 1 | 7 | 0 | 0 | 0 | 0 | 0 | 8 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 105 | 99 | 86 | 90 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 53 | 100 | 75 | 152 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 22 | 145 | 118 | 95 | ||||||||||||
| ND1 (size: 975 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 18 (5.56%)
Alanine (Ala, A)
n = 36 (11.11%)
Serine (Ser, S)
n = 21 (6.48%)
Threonine (Thr, T)
n = 20 (6.17%)
Cysteine (Cys, C)
n = 0 (0%)
Valine (Val, V)
n = 24 (7.41%)
Leucine (Leu, L)
n = 64 (19.75%)
Isoleucine (Ile, I)
n = 20 (6.17%)
Methionine (Met, M)
n = 9 (2.78%)
Proline (Pro, P)
n = 24 (7.41%)
Phenylalanine (Phe, F)
n = 17 (5.25%)
Tyrosine (Tyr, Y)
n = 12 (3.7%)
Tryptophan (Trp, W)
n = 8 (2.47%)
Aspartic acid (Asp, D)
n = 4 (1.23%)
Glutamic acid (Glu, E)
n = 11 (3.4%)
Asparagine (Asn, N)
n = 10 (3.09%)
Glutamine (Gln, Q)
n = 7 (2.16%)
Histidine (His, H)
n = 4 (1.23%)
Lysine (Lys, K)
n = 7 (2.16%)
Arginine (Arg, R)
n = 8 (2.47%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 10 | 10 | 7 | 14 | 15 | 13 | 11 | 9 | 6 | 1 | 7 | 5 | 9 | 3 | 10 | 7 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 2 | 0 | 0 | 9 | 14 | 10 | 3 | 1 | 4 | 8 | 5 | 8 | 11 | 4 | 1 | 4 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 8 | 8 | 0 | 3 | 9 | 4 | 0 | 0 | 5 | 3 | 9 | 3 | 2 | 4 | 6 | 2 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 2 | 7 | 4 | 2 | 2 | 7 | 0 | 1 | 0 | 6 | 1 | 0 | 0 | 0 | 1 | 5 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 93 | 96 | 71 | 65 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 39 | 96 | 56 | 134 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 37 | 107 | 103 | 78 | ||||||||||||
| ND2 (size: 1050 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 18 (5.16%)
Alanine (Ala, A)
n = 41 (11.75%)
Serine (Ser, S)
n = 24 (6.88%)
Threonine (Thr, T)
n = 41 (11.75%)
Cysteine (Cys, C)
n = 1 (0.29%)
Valine (Val, V)
n = 11 (3.15%)
Leucine (Leu, L)
n = 80 (22.92%)
Isoleucine (Ile, I)
n = 24 (6.88%)
Methionine (Met, M)
n = 13 (3.72%)
Proline (Pro, P)
n = 19 (5.44%)
Phenylalanine (Phe, F)
n = 10 (2.87%)
Tyrosine (Tyr, Y)
n = 8 (2.29%)
Tryptophan (Trp, W)
n = 11 (3.15%)
Aspartic acid (Asp, D)
n = 0 (0%)
Glutamic acid (Glu, E)
n = 7 (2.01%)
Asparagine (Asn, N)
n = 10 (2.87%)
Glutamine (Gln, Q)
n = 12 (3.44%)
Histidine (His, H)
n = 7 (2.01%)
Lysine (Lys, K)
n = 8 (2.29%)
Arginine (Arg, R)
n = 4 (1.15%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 12 | 12 | 10 | 18 | 22 | 23 | 4 | 11 | 11 | 1 | 2 | 2 | 6 | 1 | 6 | 4 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 3 | 0 | 1 | 9 | 14 | 14 | 4 | 4 | 3 | 9 | 2 | 1 | 11 | 5 | 2 | 9 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 19 | 13 | 0 | 5 | 6 | 8 | 0 | 1 | 4 | 5 | 3 | 0 | 2 | 2 | 8 | 1 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 6 | 7 | 0 | 0 | 0 | 4 | 4 | 1 | 1 | 2 | 0 | 0 | 0 | 0 | 1 | 11 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 77 | 109 | 101 | 63 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 39 | 120 | 53 | 138 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 24 | 116 | 134 | 76 | ||||||||||||
| ND3 (size: 1050 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 18 (5.16%)
Alanine (Ala, A)
n = 41 (11.75%)
Serine (Ser, S)
n = 24 (6.88%)
Threonine (Thr, T)
n = 41 (11.75%)
Cysteine (Cys, C)
n = 1 (0.29%)
Valine (Val, V)
n = 11 (3.15%)
Leucine (Leu, L)
n = 80 (22.92%)
Isoleucine (Ile, I)
n = 24 (6.88%)
Methionine (Met, M)
n = 13 (3.72%)
Proline (Pro, P)
n = 19 (5.44%)
Phenylalanine (Phe, F)
n = 10 (2.87%)
Tyrosine (Tyr, Y)
n = 8 (2.29%)
Tryptophan (Trp, W)
n = 11 (3.15%)
Aspartic acid (Asp, D)
n = 0 (0%)
Glutamic acid (Glu, E)
n = 7 (2.01%)
Asparagine (Asn, N)
n = 10 (2.87%)
Glutamine (Gln, Q)
n = 12 (3.44%)
Histidine (His, H)
n = 7 (2.01%)
Lysine (Lys, K)
n = 8 (2.29%)
Arginine (Arg, R)
n = 4 (1.15%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 12 | 12 | 10 | 18 | 22 | 23 | 4 | 11 | 11 | 1 | 2 | 2 | 6 | 1 | 6 | 4 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 3 | 0 | 1 | 9 | 14 | 14 | 4 | 4 | 3 | 9 | 2 | 1 | 11 | 5 | 2 | 9 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 19 | 13 | 0 | 5 | 6 | 8 | 0 | 1 | 4 | 5 | 3 | 0 | 2 | 2 | 8 | 1 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 6 | 7 | 0 | 0 | 0 | 4 | 4 | 1 | 1 | 2 | 0 | 0 | 0 | 0 | 1 | 11 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 77 | 109 | 101 | 63 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 39 | 120 | 53 | 138 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 24 | 116 | 134 | 76 | ||||||||||||
| ND4 (size: 1381 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 27 (5.88%)
Alanine (Ala, A)
n = 38 (8.28%)
Serine (Ser, S)
n = 32 (6.97%)
Threonine (Thr, T)
n = 39 (8.5%)
Cysteine (Cys, C)
n = 5 (1.09%)
Valine (Val, V)
n = 13 (2.83%)
Leucine (Leu, L)
n = 96 (20.92%)
Isoleucine (Ile, I)
n = 35 (7.63%)
Methionine (Met, M)
n = 27 (5.88%)
Proline (Pro, P)
n = 26 (5.66%)
Phenylalanine (Phe, F)
n = 16 (3.49%)
Tyrosine (Tyr, Y)
n = 14 (3.05%)
Tryptophan (Trp, W)
n = 20 (4.36%)
Aspartic acid (Asp, D)
n = 5 (1.09%)
Glutamic acid (Glu, E)
n = 12 (2.61%)
Asparagine (Asn, N)
n = 11 (2.4%)
Glutamine (Gln, Q)
n = 12 (2.61%)
Histidine (His, H)
n = 11 (2.4%)
Lysine (Lys, K)
n = 10 (2.18%)
Arginine (Arg, R)
n = 11 (2.4%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 17 | 18 | 22 | 19 | 22 | 22 | 11 | 18 | 9 | 3 | 3 | 5 | 4 | 1 | 8 | 8 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 5 | 1 | 4 | 9 | 17 | 8 | 4 | 4 | 7 | 13 | 3 | 5 | 15 | 5 | 1 | 7 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 16 | 12 | 4 | 6 | 10 | 8 | 0 | 3 | 5 | 4 | 10 | 3 | 4 | 8 | 3 | 1 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 10 | 11 | 1 | 0 | 5 | 8 | 2 | 3 | 3 | 5 | 0 | 0 | 0 | 0 | 0 | 17 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 95 | 134 | 130 | 101 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 71 | 127 | 75 | 187 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 42 | 158 | 162 | 98 | ||||||||||||
| ND4L (size: 297 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 6 (6.12%)
Alanine (Ala, A)
n = 14 (14.29%)
Serine (Ser, S)
n = 9 (9.18%)
Threonine (Thr, T)
n = 7 (7.14%)
Cysteine (Cys, C)
n = 3 (3.06%)
Valine (Val, V)
n = 3 (3.06%)
Leucine (Leu, L)
n = 23 (23.47%)
Isoleucine (Ile, I)
n = 2 (2.04%)
Methionine (Met, M)
n = 6 (6.12%)
Proline (Pro, P)
n = 2 (2.04%)
Phenylalanine (Phe, F)
n = 6 (6.12%)
Tyrosine (Tyr, Y)
n = 1 (1.02%)
Tryptophan (Trp, W)
n = 1 (1.02%)
Aspartic acid (Asp, D)
n = 1 (1.02%)
Glutamic acid (Glu, E)
n = 3 (3.06%)
Asparagine (Asn, N)
n = 1 (1.02%)
Glutamine (Gln, Q)
n = 3 (3.06%)
Histidine (His, H)
n = 4 (4.08%)
Lysine (Lys, K)
n = 0 (0%)
Arginine (Arg, R)
n = 3 (3.06%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 1 | 1 | 4 | 5 | 8 | 8 | 0 | 2 | 3 | 0 | 0 | 0 | 2 | 1 | 5 | 1 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 2 | 1 | 2 | 1 | 8 | 3 | 2 | 1 | 2 | 2 | 1 | 1 | 0 | 1 | 0 | 2 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 2 | 3 | 0 | 1 | 1 | 4 | 0 | 0 | 3 | 0 | 1 | 0 | 0 | 0 | 1 | 2 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 2 | 2 | 1 | 0 | 1 | 0 | 0 | 0 | 2 | 1 | 0 | 0 | 0 | 1 | 0 | 1 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 27 | 33 | 19 | 20 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 16 | 29 | 14 | 40 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 7 | 35 | 37 | 20 | ||||||||||||
| ND5 (size: 1839 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 32 (5.23%)
Alanine (Ala, A)
n = 52 (8.5%)
Serine (Ser, S)
n = 42 (6.86%)
Threonine (Thr, T)
n = 67 (10.95%)
Cysteine (Cys, C)
n = 6 (0.98%)
Valine (Val, V)
n = 25 (4.08%)
Leucine (Leu, L)
n = 97 (15.85%)
Isoleucine (Ile, I)
n = 50 (8.17%)
Methionine (Met, M)
n = 28 (4.58%)
Proline (Pro, P)
n = 28 (4.58%)
Phenylalanine (Phe, F)
n = 40 (6.54%)
Tyrosine (Tyr, Y)
n = 8 (1.31%)
Tryptophan (Trp, W)
n = 14 (2.29%)
Aspartic acid (Asp, D)
n = 13 (2.12%)
Glutamic acid (Glu, E)
n = 11 (1.8%)
Asparagine (Asn, N)
n = 31 (5.07%)
Glutamine (Gln, Q)
n = 20 (3.27%)
Histidine (His, H)
n = 19 (3.1%)
Lysine (Lys, K)
n = 20 (3.27%)
Arginine (Arg, R)
n = 9 (1.47%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 29 | 21 | 21 | 20 | 25 | 29 | 6 | 14 | 16 | 4 | 6 | 8 | 7 | 4 | 12 | 28 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 7 | 0 | 6 | 13 | 26 | 8 | 5 | 1 | 10 | 14 | 7 | 7 | 11 | 5 | 5 | 17 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 29 | 18 | 3 | 5 | 13 | 12 | 0 | 3 | 9 | 2 | 6 | 5 | 3 | 8 | 23 | 3 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 16 | 8 | 3 | 3 | 10 | 16 | 4 | 0 | 1 | 7 | 1 | 0 | 0 | 1 | 0 | 9 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 133 | 156 | 208 | 116 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 73 | 177 | 123 | 240 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 57 | 242 | 185 | 129 | ||||||||||||
| ND6 (size: 522 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 24 (13.87%)
Alanine (Ala, A)
n = 20 (11.56%)
Serine (Ser, S)
n = 12 (6.94%)
Threonine (Thr, T)
n = 5 (2.89%)
Cysteine (Cys, C)
n = 2 (1.16%)
Valine (Val, V)
n = 28 (16.18%)
Leucine (Leu, L)
n = 31 (17.92%)
Isoleucine (Ile, I)
n = 2 (1.16%)
Methionine (Met, M)
n = 4 (2.31%)
Proline (Pro, P)
n = 4 (2.31%)
Phenylalanine (Phe, F)
n = 10 (5.78%)
Tyrosine (Tyr, Y)
n = 8 (4.62%)
Tryptophan (Trp, W)
n = 5 (2.89%)
Aspartic acid (Asp, D)
n = 3 (1.73%)
Glutamic acid (Glu, E)
n = 6 (3.47%)
Asparagine (Asn, N)
n = 1 (0.58%)
Glutamine (Gln, Q)
n = 0 (0%)
Histidine (His, H)
n = 2 (1.16%)
Lysine (Lys, K)
n = 1 (0.58%)
Arginine (Arg, R)
n = 5 (2.89%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 1 | 1 | 1 | 7 | 0 | 1 | 2 | 6 | 0 | 0 | 6 | 0 | 7 | 15 | 8 | 2 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 3 | 1 | 1 | 7 | 1 | 4 | 8 | 5 | 2 | 5 | 12 | 2 | 1 | 0 | 1 | 1 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 0 | 3 | 1 | 7 | 0 | 2 | 1 | 2 | 0 | 2 | 6 | 4 | 15 | 0 | 1 | 1 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 1 | 2 | 4 | 3 | 0 | 0 | 1 | 2 | 0 | 1 | 2 | 0 | 0 | 0 | 1 | 1 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 81 | 21 | 15 | 57 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 38 | 39 | 22 | 75 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 70 | 16 | 33 | 55 | ||||||||||||
| Total protein-coding genes (size: 11434 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 248 (6.51%)
Alanine (Ala, A)
n = 353 (9.27%)
Serine (Ser, S)
n = 239 (6.28%)
Threonine (Thr, T)
n = 310 (8.14%)
Cysteine (Cys, C)
n = 27 (0.71%)
Valine (Val, V)
n = 228 (5.99%)
Leucine (Leu, L)
n = 657 (17.25%)
Isoleucine (Ile, I)
n = 267 (7.01%)
Methionine (Met, M)
n = 150 (3.94%)
Proline (Pro, P)
n = 212 (5.57%)
Phenylalanine (Phe, F)
n = 226 (5.93%)
Tyrosine (Tyr, Y)
n = 110 (2.89%)
Tryptophan (Trp, W)
n = 121 (3.18%)
Aspartic acid (Asp, D)
n = 74 (1.94%)
Glutamic acid (Glu, E)
n = 104 (2.73%)
Asparagine (Asn, N)
n = 116 (3.05%)
Glutamine (Gln, Q)
n = 100 (2.63%)
Histidine (His, H)
n = 109 (2.86%)
Lysine (Lys, K)
n = 75 (1.97%)
Arginine (Arg, R)
n = 75 (1.97%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 138 | 129 | 104 | 151 | 146 | 173 | 52 | 105 | 87 | 13 | 59 | 54 | 81 | 34 | 108 | 118 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 46 | 7 | 20 | 87 | 150 | 85 | 31 | 39 | 70 | 92 | 47 | 55 | 86 | 52 | 19 | 79 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 117 | 101 | 13 | 53 | 69 | 61 | 4 | 12 | 40 | 33 | 77 | 25 | 30 | 40 | 76 | 31 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 78 | 79 | 25 | 24 | 50 | 61 | 14 | 9 | 12 | 47 | 7 | 0 | 0 | 5 | 3 | 96 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 1007 | 1018 | 970 | 814 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 523 | 1062 | 696 | 1528 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 363 | 1292 | 1229 | 925 | ||||||||||||
>NC_006897.1 Oncorhynchus clarkii henshawi mitochondrion, complete genome ACGGCCATAACTATGTACTATTGTAAATGTTATAACCTGTAAACCCTATGTTATTCTACATCTATGTATA ATATTACATATTATGTATTTACCCATATATAATACTGCACGTGAGTAGTACATTATATGTATTATCAACA TACGGTGATTTCAACCCCTCATACATCAGTACAAATCCAAGGTTTACAATAAGCAAAACACGTGATAATA ACCAACCTAATTGTCCTAAACTGATTAATTGCTATATCAATAAACCTCCAACTAACACGGGCTCCGTCTT TACCCACCAACTTTCAGCATCAGTCCGGCTTAATGTAGTAAGAACCGACCAACGATTTATCAGTAGGCAT ACTCTTATTGATGGTCAGGGGCAGATATCGTATTAGGTCGCATCTCGTGAATTATTCCTGGCATTTGGTT CCTAAGTCAAGGGCTATCCTTAAGAAACCAGCCCCTGAAAGCCGAATGTAAAGCATCTGGTTAATGGTGT CAATCTTATTGCCCGTTACCCACCAAGCCGGGCGTTCTCTTATATGCATAGGGTTCTCTTTTTTTTTTCT TTCCTTTCAGCTTGCATATACAAGTGCAAGCAAAGAAGTCTAACAAGGTCGAACTAGACCTTGAATTCCA GAGAACCCATGTATCATGGTGAAATGATATTCTATAAAGAATCACATACTTGGATATCAAGTGCATAAGG TCTATTATTTCCTTCACAAATACCTAACATTTCCCCGGCTTTCGCGCGGTAAACCCCCCTACCCCCCTAA GCTGAAAGATCCTTATGTTCCTGTTAAACCCCTAAACCAGGAGGTATCGAATCAGCAATATTTTTTGTAT ACATTAATAAACTTTTAGTGCACTTTATAGCATTTGGCACCGACAACGCTGTGGTACGTACACTTTCATA ATTAAAGTATACATTAATAAACTTTTTGACCCCCTTCGTAGCATCTAGCACCGACAACACTGATATCAAT ACCATTTCCACGCACAACCTGCTGCTAGCGTAGCTTAACTAAAGCATAACACTGAAGCTGTTAAGATGGA CCCTAGAAAGTCCCGCGGGCACAAAGGCTTGGTCCTGACTTTACTATCAGCTATAACTGAACTTACACAT GCAAGTCTCCGCATTCCTGTGAGGATGCCCTTAATCCCCTGCCCGGGGACGAGGAGCCGGCATCAGGCGC GCCCAAGCAGCCCACGACGCCTTGCTAAGCCACACCCCCAAGGAAACTCAGCAGTGATAAATATTAAGCC ATAAGCGAAAGCTTGACTTAGTTAAGGTTAAGAGGGCCGGTAAAACTCGTGCCAGCCACCGCGGTTATAC GAGAGGCCCTAGTTGATAACTACCGGCGTAAAGAGTGGTTATGGAAAAATATTTAATAAAGCCGAACACC CCCTCAGCCGTCATACGCACCTGGGAGCACGAAGACCTACTGCGAAAGCAGCTTTAACTATACCTGACCC CACGACAGCTAAGAAACAAACTGGGATTAGATACCCCACTATGCCTAGCCGTAAACCTTGATAGAAATAC ACAATTGATATCCGCCAGGGAACTACAAGCGCCAGCTTAAAACCCAAAGGACTTGGCGGTGCCTCAGACC CACCTAGAGGAGCCTGTTCTAGAACCGATAACCCCCGTTCAACCTCACCACCCCTTGTTTTACCCGCCTA TATACCACCGTCGTCAGCTTACCCTGTGAAGGCCTAATAGTAAGCAAAATGGGTAGAACCCAAAACGTCA GGTCGAGGTGTAGCGCATGAGGTGGGAAGAAATGGGCTACATTCTCTAAATTAGAGCACTACGAACCACG CTGTGAAATCAGCGTCCGAAGGTGGATTTAGCAGTAAACAGAAAACAGAGAGTTCTCTTGAAACTGGCTC TGAGGCGCGCACACACCGCCCGTCACTCTCCCCAAGTTCAACCTATCCTTCTAACTAAGAAGTTAACCGA ACAAAGGGGAGGCAAGTCGTAACATGGTAAGTGTACCGGAAGGTGCGCTTGGAATAACCAGAGTGTAGCT AAAATAGGAAAGCACCTCCCTTACACCGAGAAGACATCCGTGCAAATCGGGTCACCCTGAGCTGACTAGC TAGCCAACATACATGGTCTAACACCACAACATATATACCCCAATAAAACTTAGAATTAAGTCAACAAACC ATTTTTCCACCTTAGTAGGGGCGACCGAAAAGGAAATAATTGAGCAACAGAAAAAGTACCGCAAGGGAAA GCTGAAAGAGAACTGAAATAACCCATTTAAGCCTAGGAAAGCAGAGATTAAATCTCGTACCTTTTGCATC ATGATTTAGCCAGCAAACCTGAGCAAAGAGAACTTTAGTTCAGGCCCCCGAAACTAGACGAGCTACTCCG GGACAGCCTATTGTAGGGCTAACCCGTCTCTGTGGCAAAAGAGTGGGACGAGCCCCGAGTAGAGGTGATA AACCTATCGAGCCTAGTTATAGCTGGTTGCTTAGGAAATGAATAGAAGTTCAGCCCCCCGGCTTTCTTAG GACCTTAAGGTAAAACTAATATTGTCCCAAAGAAACCAGGAGAGTTAGTCAAAGGAGGTACAGCTCCTTT GAACAAGGACACAACCTTAACAGGCGGCTAAGGATCATAGTTACCAAGGTAACCTGTTACAGTGGGCCTA AGAGCAGCCACCTGCACAGAAAGCGTTAAAGCTCAGACAGATACAAACCTCTTATCCTGATAAGAAATCC TACCCCCTAACCGTACTAAGCCGTTCCATGCCCCCATGGAAGAGATTATGCTAGAATGAGTAATAAGAGA GAACAACTCTCTCCCAGCACATGTGTAAGTCGGATCGGACCCACCACCGACAAATAACGAACCCAAGCCA AGAGGGAAATGTAGGCCAGAATAGACACCAAGGAAAACCTACAAAACGAATCGTTAACCCCACACAGGAG TGCCCCAGGGAAAGACCCAAAGGAAGAGAAGGAACTCGGCAAACACAAGCCTCGCCTGTTTACCAAAAAC ATCGCCTCTTGCAAATCAAAGCATAAGAGGTCCCGCCTGCCCTGTGACTATGGGTTTAACGGCCGCGGTA TTTTGACCGTGCGAAGGTAGCGCAATCACTTGTCTTTTAAATGAAGACCTGTATGAATGGCATCACGAGG GCTTAGCTGTCTCCTCTTCCAAGTCAATGAAATTGATCTGCCCGTGCAGAAGCGGACATAAATACATAAG ACGAGAAGACCCTATGAAGCTTTAGACACCAGGCAGATCACGTCAAGCAACCTTGAATTAACAAGTAAAA ACGCAGTGACCCCTAGCCCATATGTCTTTGGTTGGGGCGACCGCGGGGGAAAATTAAGCCCCCATGTGGA CTGGGGGCACTGCCCCCACAGCCGAGAGCTACGGCTCTAAGCACCAGAATATCTGACCAAAAATGATCCG GCAAACGCCGATCAACGGACCGAGTTACCCTAGGGATAACAGCGCAATCCTCTCCCAGAGTCCCTATCGA CGAGGGGGTTTACGACCTCGATGTTGGATCAGGACATCCTAATGGTGCAGCCGCTATTAAGGGTTCGTTT GTTCAACGATTAAAGTCCTACGTGATCTGAGTTCAGACCGGAGTAATCCAGGTCAGTTTCTATCTATGAA GTGATGTTTCCTAGTACGAAAGGACCGGAAAGAAGGGGCCCATGCTTGAGGCACGCCCCACCCCCACCTG ATGAAGGCAACTAAAACAGACAAGGGGGCACACCAAGATTGCCTGAAAGAACGGCGCGCTAAGGTGGCAG AGCCCGGTAATTGCGAGAGGCCTAAGCCCTCTTTCTCAGAGGTTCAAACCCTCTCCCTAGCTATGATCAC CACCCTAATTACCCACGTTATTAACCCACTGGCGTACATCATTCCCGTCCTGTTAGCAGTTGCTTTCCTC ACCCTACTTGAACGAAAAGTCCTTGGGTATATGCAACTTCGAAAAGGGCCCAATATCGTCGGCCCCTACG GACTGCTGCAACCCATCGCAGACGGCCTAAAACTATTTATTAAAGAACCAGTTCGACCTTCCACCTCCTC TCCCTTTCTATTTCTCGCCACACCTATACTCGCCCTTACACTTGCGCTCACTCTATGGGCCCCCATACCT ATTCCTTACCCTGTCACAGATCTTAACCTTGGAGTACTATTTGTGCTTGCACTGTCCAGCCTAGCTGTAT ATTCTATTTTAGGGTCAGGATGAGCATCAAACTCCAAATACGCTTTAATTGGGGCCCTCCGGGCAGTGGC ACAAACCATTTCCTACGAAGTTAGCCTAGGTTTAATCTTACTCAGCGTGATTGTTATCACAGGAGGATTT ACTCTTCAAACCTTCAACGTAGCCCAAGAAAGCATCTGACTGCTCGTACCAGCCTGACCACTTGCCGCCA TATGATACATTTCTACCCTCGCTGAGACAAACCGTGCACCCTTTGACCTCACAGAAGGAGAGTCAGAATT AGTATCCGGGTTCAATGTAGAGTATGCTGGAGGACCCTTCGCCCTCTTTTTCCTAGCCGAGTACGCTAAT ATCCTTCTGATAAATACACTCTCAGCCGTCCTGTTTTTAGGCGCGTCCCACATCCCTGCTTTCCCCGAAC TAACTGCCATAAACCTAATAACAAAAGCTGCCCTCCTCTCCGTTGTATTTTTGTGAGTACGAGCTTCCTA CCCGCGATTTCGATACGATCAACTCATACATTTGGTTTGGAAAAGCTTCCTACCCCTGACTCTGGCCCTT GTACTGTGGCATTTAGCACTTCCCATCGCATTAGCAGGCCTCCCTCCTCAGCTTTAGCCCCGGAATTGTG CCTGAATGCTTAAGGACCACCTTGATAGCGTGGCTGATAGGGGTTCAAGTCCCCTCAATTCTAGAGAGAA GGGGCTCGAACCCATCCTCAAGAGATCAAAACTCTTGGTGCTTCCACTACACCACTTTCTAGTAAGGTCA GCTAATTAAGCTTTCGGGCCCATACCCCGAATATGTTGGTTAAAATCCTTCCCTCACTAATGAACCCCTA CGTACTCACCATCTTACTTTCTAGCCTAGGGTTAGGTACAGTCCTCACCTTTGCCAGCTCCCACTGACTA CTTGCATGAATAGGCCTAGAAATCAATACCCTCGCTATTATCCCGATCATAGCGCAACAACACCACCCCC GAGCAATTGAAGCAACAACCAAGTATTTTTTAACCCAGGCAACCGCCGCAGCAATAATCCTTTTTGCTAG TACCACCAACGCCTGACTAATGGGAGAATGAGAAATTCACCAACTATCACATCCCCTAGCAACTACAACA GTAATATTAGCCCTCGCTCTCAAGCTTGGACTAGCACCCGTTCACTTCTGACTCCCAGAAGTTCTTCAAG GACTTGAACTCACCACAGGATTAATCCTCTCAACCTGACAAAAACTAGCGCCCTTCGCACTTATAATTCA AGTAGCCCCAACCATCAACTCTTCCCTACTTGTCGCAATCGGCCTTCTATCAACACTTGTAGGAGGTTGA GGTGGGCTTAATCAAACCCAACTGCGTAAAATTCTAGCATATTCTTCAATCGCCCACCTAGGATGAATAG TACTAATTTTACAATTCGCACCCTCCCTCACACTCCTCAGCCTGTCCCTATATATTATCATAACATCTTC AGCATTCCTCACATTAAAAACCAACAACGCTTTAACCATCAACACTCTCGCGACTTCATGAACTAAATCC CCGACCCTTGCCGCATTAGCCGCTCTTGTACTGCTATCCCTTGGAGGTCTCCCCCCTCTCTCAGGCTTTA TACCAAAGTGACTTATTTTGCAAGAACTAACAAAGCAAGGACTCCCACTATCTGCCACACTAGCTGCTAT AACAGCCCTCCTGAGCCTTTACTTTTATCTACGACTCTGCTACGCCTTAACCCTCACTATTTATCCCAAC ACCCTAACTGCCACTGCCCCCTGACGCCTCAACTTTACCATAATTACCCTCCCCCTTTCAATTATTACTA TCCTAGCCCTAGGACTACTTCCCCTCACACCAGCTGTGACTGCGATGTTAGCTTTGTAGTAAGGGCTTAG GATAGTATTAAGACCAAGAGCCTTCAAAGCTCTAAGCGGGGGTGAAAGCCCCCCAGCCCTTGTTAAGACT TGCAGGACTTTATCCCACATCTTCTGAATGCAACCCAGACACTTTAATTAAGCTAAAGCCTTTCTAGGTG GGAAGGCCTCGATCCTACAAACTCTTAGTTAACAGCTAAGCGCTCTATCCAGCGAGCATCCATCTACTTT CCCCCGCCACCGGGGGGGCGAGGCGGGGGAAAGCCCCGGCAGGCTACTAGCCTACTTCTTCAGATTTGCA ATCTAACGTGTGGTACACCACAGGACTTGATAAGGAGAGGAATTAAACCTCTGTTTATGGAGCTACAATC CACCGCTTAAGCTCTCAGCCACCCTACCTGTGGCAATCACACGATGATTCTTCTCAACCAACCACAAAGA CATTGGCACCCTCTATTTAGTATTTGGTGCCTGAGCCGGGATAGTAGGCACCGCCCTGAGTCTACTGATT CGGGCAGAACTAAGCCAGCCGGGCGCTCTTCTAGGGGATGACCAGATCTATAACGTAATCGTCACAGCCC ATGCCTTCGTTATGATTTTCTTTATAGTTATGCCAATTATGATCGGGGGCTTTGGAAACTGATTAATTCC CTTAATAATCGGGGCCCCTGATATAGCATTCCCTCGAATAAATAACATAAGCTTCTGACTCCTTCCTCCA TCCTTTCTCCTCCTCCTATCTTCATCTGGAGTTGAAGCCGGCGCCGGTACTGGATGAACAGTTTACCCCC CTCTGGCCGGTAACCTCGCCCATGCAGGAGCCTCTGTTGATTTAACTATCTTCTCCCTTCATTTAGCTGG AATCTCCTCAATTTTGGGAGCCATTAATTTTATTACGACCATTATTAACATAAAACCTCCGGCTATCTCT CAATACCAAACCCCCCTTTTTGTTTGAGCTGTGCTAGTCACTGCTGTCCTTCTATTACTTTCCCTTCCCG TCCTGGCAGCAGGCATTACTATGTTACTTACAGACCGAAATCTAAACACCACTTTCTTTGACCCGGCAGG CGGAGGAGACCCAATTCTATACCAACACCTCTTTTGATTCTTCGGCCACCCAGAAGTCTATATTCTCATC CTCCCAGGCTTTGGTATGATTTCACATATCGTTGCATACTACTCCGGCAAAAAAGAACCCTTCGGATATA TAGGAATAGTCTGAGCTATAATAGCCATCGGATTATTAGGATTTATCGTTTGAGCCCACCACATGTTTAC TGTCGGGATAGACGTGGACACTCGTGCCTACTTTACATCTGCCACCATGATTATCGCTATCCCTACAGGA GTAAAAGTATTTAGCTGACTAGCCACACTACACGGAGGCTCGATCAAATGAGAAACACCACTTCTTTGAG CCCTCGGGTTCATTTTTCTATTTACAGTGGGCGGACTTACGGGTATTGTCCTTGCTAACTCCTCATTAGA CATTGTTCTACATGACACTTATTACGTAGTTGCTCATTTCCACTACGTATTATCCATAGGAGCTGTGTTT GCTATTATAGGCGCTTTCGTACACTGATTCCCCCTATTTACAGGATACACCCTTCACAGCACATGGACCA AAATCCATTTCGGAATTATATTTATCGGCGTAAATTTAACCTTTTTCCCACAGCATTTCCTAGGCCTCGC GGGGATACCACGACGGTACTCTGACTACCCAGACGCCTATACACTATGAAACACTGTGTCCTCAATTGGA TCCCTTGTGTCCTTAGTAGCTGTAATTATGTTCCTATTTATTCTCTGAGAAGCTTTTGCTGCCAAACGAG AGGTAGCATCAATCGAATTAACTTCAACGAACGTAGAATGACTACACGGTTGCCCCCCGCCCTACCACAC ATTTGAGGAACCAGCATTTGTCCAAGTACAAGCAAACTAACGAGAAAGGGAGGAATTGAACCCCCATGTG ATGGTTTCAAGCCAACCGCATAACCACTCTGCCACTTTCTTCCATAAGACACTAGTAAAACTAGTCTATT ACACTGCCTTGTCAAGGCAAAATTGTGGGTTAAAACCCCGCGTGTCTTAAGCACTTAGCTAGAATGGCAC ATCCCTCACAACTAGGATTCCAAGACGCGGCCTCCCCTGTAATAGAAGAACTTCTTCATTTCCACGACCA CGCTCTTATGATTGTTCTTCTTATCAGCACACTAGTGCTTTATATCATCGTAGCAATAGTCTCTACTAAA CTTACTAATAAATATATCCTTGATTCTCAAGAAATCGAGATCGTTTGAACCGTCCTACCGGCAGTCATCC TTATTCTCATCGCCCTCCCTTCACTCCGAATTCTCTACCTTATGGACGAAATTAACGACCCCCACCTCAC TATTAAAGCAATAGGTCACCAATGATATTGAAGTTATGAATACACCGACTACGAAGATTTAGGCTTTGAT TCTTACATAGTCCCTACTCAAGATTTAGCGCCCGGTCAATTCCGTCTTCTAGAGACAGACCATCGAATAG TTGTCCCTGTAGAATCCCCAATCCGAGTTCTCGTCTCAGCTGAAGACGTCCTTCACTCCTGAGCCGTTCC TTCCTTAGGTGTAAAAATAGACGCAGTTCCAGGGCGATTAAACCAAACAGCCTTTATTGCCTCTCGACCT GGAGTATTCTACGGACAATGTTCTGAAATCTGCGGGGCTAACCACAGCTTCATACCCATCGTTGTTGAAG CAGTACCCTTGGAACACTTCGAGAAATGATCCACTATAATACTTGAAGATGCCTCACTAAGAAGCTAAAT CGGGAATAGCGTTAGCCTTTTAAGCTAAAGATTGGTGGCCCCCAACCACCCCTAGTGACATGCCCCAACT CAACCCCGCCCCCTGATTTGCTATTTTAGTATTCTCATGACTGGTTTTCCTAACTGTTATTCCTCCAAAA GTCCTCGGCCACACTTTCACAAATGAGCCTACCTCACAAAGCACTGAAAAAGCTAAACCTGAACCCTGAA ACTGACCATGACACTAAGCTTCTTCGACCAATTTATGAGCCCCACGTACCTAGGTATCCCACTTATTGCT GTAGCATTAACCCTCCCATGAATTCTTTTCCCTACCCCCTCTGCCCGATGGTTAAACAACCGCCTGATCA CCCTACAAGGATGATTCATCAACCGATTTACCCAACAACTTCTTTTACCACTAAATTTGGGCGGTCACAA GTGAGCAGCTCTACTAACTTCCCTAATACTATTTCTTATTACCCTGAATATACTAGGCCTACTTCCATAT ACATTTACCCCAACTACACAGCTCTCCCTAAATATGGGTCTCGCAGTCCCGTTATGGCTCGCCACAGTAA TTATCGGCATACGAAACCAACCTACTGCCGCTCTAGGTCATCTACTACCTGAGGGAACCCCCGTTCCACT GATCCCTGTACTGATCATTATCGAAACAATTAGCCTTTTTATCCGCCCCCTCGCCCTTGGCGTACGACTT ACAGCCAATCTCACAGCGGGCCACCTTCTCATCCAACTAATCGCTACAGCAGCCTTTGTTCTCCTACCTA TAATACCTACAGTAGCAATCCTAACTTCTATTGTCCTTTTTCTGCTTACCCTTCTCGAAATCGCTGTAGC CATGATTCAAGCCTACGTTTTTGTCTTACTCCTAAGCCTCTATTTACAAGAGAACGTTTAATGGCACACC AAGCACACGCATACCACATGGTTGACCCAAGCCCCTGACCTCTGACCGGCGCAATTGCCGCCCTTTTACT TACATCAGGCACTGCAGTCTGATTCCATTTCCACTCACTCACACTACTTACCTTAGGTAATATTCTCTTA CTTCTAACCATGTACCAATGATGGCGAGATATCATCCGAGAAGGTACCTTTCAAGGACACCACACACCCC CGGTCCAAAAAGGACTACGATACGGCATAATCTTATTTATTACCTCCGAAGTATTCTTTTTCTTAGGTTT CTTCTGAGCCTTCTACCACGCCAGCCTCGCCCCCACACCTGAATTAGGAGGTTGCTGACCCCCCACAGGC ATTACTACTCTAGACCCCTTTGAGGTACCCCTTCTTAATACTGCGGTCCTTCTAGCATCTGGTGTTACCG TCACGTGAGCCCACCACAGCATCATGGAAGGTGAGCGGAAACAAACCATTCAAGCTCTTACTCTAACCAT TCTACTGGGATTTTACTTCACTTTCCTACAAGGTATAGAATACTACGAAGCCCCGTTTACAATTGCTGAC GGCGTGTACGGCTCTACTTTCTTTGTCGCTACAGGTTTCCATGGCCTACACGTAATTATTGGCTCTACCT TTCTGGCCGTTTGCCTTCTACGACAAGTTCAATACCACTTTACATCTGAACATCATTTTGGCTTTGAAGC TGCTGCTTGATATTGACACTTTGTAGACGTTGTATGACTCTTCCTATACGTCTCTATTTACTGATGAGGC TCATAATCTTTCTAGTATTAACACGTATAAGTGACTTCCAATCACCCGGTCTTGGTTAAAATCCAAGGAA AGATAATGAACTTAATTACAACAATCATCACTATCACCATCACATTGTCCGCAGTACTAGCCACTATTTC TTTCTGATTACCACAAATCTCCCCAGACGCAGAGAAGTTATCCCCCTACGAATGTGGATTTGACCCCCTA GGATCCGCCCGCCTGCCTTTCTCCTTACGCTTCTTTCTAATCGCTATCCTATTCCTCCTGTTTGATCTAG AAATTGCCCTCCTTTTACCCCTGCCTTGAGGGGATCAACTCAACACCCCAACCCTAACACTTATTTGATC CACTGCCGTACTAGCCCTTCTTACTCTTGGCTTAATCTATGAATGAACCCAAGGAGGCTTAGAATGGGCC GAATAGGCAGTTAGTCCAAAACAAGACCCTTGATTTCGGCTCAAAAAACCATGGTTTAAGTCCATGACCG CCTTATGACACCAGTACACTTCAGCTTTACCTCAGCCTTTATTCTAGGGCTTATAGGACTCGCGTTTCAC CGCACCCATCTTCTCTCAGCCCTTCTATGCCTAGAAGGAATAATACTTTCTCTATTTATCGCCCTCTCCC TCTGAGCCCTCCAAATGGAAGCAACTGGCTACTCAGTGGCTCCTATACTTCTACTAGCCTTTTCAGCCTG CGAGGCCAGCGCAGGTTTAGCCCTACTAGTAGCGACTGCACGAACACATGGCACAGACCGCCTCCAAAGC TTAAACCTCCTCCAATGTTAAAAATCCTCATCCCTACACTCATGCTTTTTCCAACGATCTGGCTCAGCCC CGCGAAATGATTATGAACTACATCAATCGCCCAAAGTTTAGCGATCGCCCTAGCAAGTTTGTCCTGACTT AAGTGATCCTCAGAAACCGGATGGTCCTCCTCTAACCTCTATTTAGCAACTGACCCCCTATCAACACCTC TGCTAGTATTAACCTGCTGATTACTTCCCCTTATAATCCTTGCCAGCCAAAATCACCTCTCTCCCGAACC ATTAAATCGCCAGCGAGCCTACATCTCCCTCCTGGTCTCCCTTCAAACATTTCTAATCTTAGCATTCGGG GCCACAGAAATTATTATATTTTACATCATATTCGAAGCCACGTTACTCCCGACCCTCATTATTATTACCC GATGAGGAAATCAAACAGAACGCCTCAATGCCGGTACTTACTTCCTATTCTATACCTTGGCTGGCTCCCT ACCCCTCCTCGTGGCCCTGCTTCTTATACAGAATGACAACGGAACCCTATCTATGTTTACCTTGCAATAC ACGCAGCCCCTGCACCTTCTGACATGAGGAGACAAACTGTGGTGAGCTGCCTGCCTTTTAGCTTTCCTTG TAAAAATACCCCTCTACGGCGTACACCTTTGACTTCCAAAAGCCCACGTAGAAGCTCCAATCGCCGGATC AATGATCCTAGCGGCTGTTCTCCTCAAACTAGGGGGATACGGCATAATACGTATAATAGTCATACTAGAC CCCCTGACCAAAGAATTAGCTTACCCCTTTATTGTTTTAGCCCTCTGAGGTGTCATTATAACAGGATCTA TCTGCCTACGTCAAACAGACCTGAAATCACTAATCGCATACTCTTCAGTCGGCCACATAGGATTAGTCGC AGGAGGTATTTTAATTCAAACACCCTGAGGATTTACTGGTGCAATTATTCTCATAATCGCACACGGCCTT GCCTCCTCAGCACTATTCTGCTTAGCCAATACTAGCTACGAGCGCACCCACAGCCGAACCATACTACTAG CTCGAGGAATGCAAATAATTCTCCCCCTAATAACCACTTGATGATTTATAGCTAGTTTAGCCAATCTGGC CCTCCCCCCTCTCCCCAACCTGATAGGAGAACTAATAATCATCACTTCTATATTTAATTGATCATATTGA ACCCTTATCCTCACGGGACTGGGCACATTAATTACAGCGAGCTACTCCCTTTATTTGTTCTTAATAACCC AACGTGGGCCCCTACCTTCCCATGTTATTGCTCTTGAACCCACCCACACCCGAGAACACCTACTTATTAT TCTACACCTCACCCCAATCGCCCTCCTAATTCTAAAGCCTGAACTTATATGAGGCTGATGTTTCTGTAGA TATAGTTTAACCAAGACATTAGATTGTGATTCTAAAAATAGAGGTTGAAATCCTCTTATCCACCGAGAGA AATCTGTTGATAGCAGAGACTGCTAATCTTCTGCCTCCTCAGTTAAATTCTGTGGTTCACTCGTGCTTCT AAAGGATAACAGCTCATCCATTGGTCTTAGGAACCAAAAACTCTTGGTGCAAATCCAAGTAGCAGCTATG CACCCGACTACACTCATCTTAAGCTCATCCCTTTTAATAATCTTCGCACTTCTAATTTATCCTCTTGTTA CTACCCTCACCCCGACCCCCCAGCACAAAAACTGAGCCCTCACTCACGTAAAAACTGCTATCAAAATGGC CTTCCTAGTGAGCTTACTCCCCCTTTTTGTCTTCCTAGACCAAGGAACCGAAACTATCGTCACTAATTGG CAGTGAATAAACACCACAACCTTTGACATTAACCTTAGCTTTAAATTTGACCACTACTCCATTATTTTCA CCCCCATTGCCCTGTACGTAACCTGATCTATTCTAGAATTCGCATCCTGGTATATACATGCTGACCCCAA CATAAACCGGTTCTTTAAGTACCTCCTCCTCTTCCTGATTGCCATAATTATTTTGGTAACCGCCAACAAC ATGTTCCAACTGTTTATCGGCTGAGAGGGGGTTGGAATTATATCATTCCTCCTTATCGGGTGGTGGCACG GTCGAGCCGACGCTAATACAGCTGCTATACAAGCTGTGATTTACAACCGAGTAGGGGACATCGGACTTAT CCTAAGTATGGCCTGGTTCGCAACAAACCTAAACTCCTGAGAAATTCAACAAATATTTGCCTCCTCAAAA GGACTTGACCTCACACTCCCTCTTATGGGCCTCATTCTAGCCGCCACCGGCAAATCAGCGCAATTTGGAC TTCACCCGTGACTTCCTTCCGCGATAGAGGGCCCTACGCCGGTATCTGCCCTACTACACTCCAGCACCAT GGTCGTGGCGGGCATCTTCCTATTGATTCGACTCCACCCTCTGATAGAAGATAACCAAACAGCCTTAACC ACATGCTTATGCCTAGGAGCCCTAACTACCCTCTTCACCGCTACCTGCGCCCTCACCCAAAATGATATCA AAAAAATTATCGCATTCTCCACATCCAGCCAACTAGGGCTCATAATAGTCACCATTGGACTTAATCAACC CCAGCTAGCCTTCCTCCACATCTGCACTCACGCATTCTTCAAGGCTATACTTTTCCTATGCTCAGGCTCA ATTATCCATAGTTTAAACGACGAGCAGGACATTCGAAAAATAGGAGGAATGCACAACCTCACCCCACTTA CTTCCTCTTGCCTTACAATCGGGAGCCTCGCGCTAACTGGCACCCCATTCTTAGCAGGGTTCTTCTCCAA AGACGCTATTATTGAAGCCTTAAACACCTCTCACCTCAACGCCTGAGCCCTCACTCTTACCTTACTAGCC ACCTCATTCACTGCCGTTTACAGCCTCCGAGTCATCTTTTTCGTCTCTATAGGACACCCCCGCTTTACAG CTACAGCCCCTATTAATGAAAATAACCCGTCCGTAATTAACCCAATCAAGCGACTAGCCTGAGGGAGCAT CATTGCAGGACTTCTAATTACCTCAAACTTCCTACCCACCAATACCCCCGTGATAACTATACCCACCCAC TTAAAATTAGCCGCTCTCCTAGTTACCATCTCAGGCCTTCTCATTGCATTAGAACTTGCGTCACTAACTA ACAAACAATTTAAAACTACACCCAACCTTATTCTACATAACTTCTCCAACATACTAGGATTCTTCCCCGC TATCATCCACCGACTGGCCCCAAAACTAAACTTAACTTTAGGACAAACCATTGCCAGCCAAATAGTAGAT CAAACATGATTTGAAAAGGTCGGCCCAAAAGGAATTGTTTCAACTCACCTGCCTATAGTCACGACAACAA GTAATATCCAACAAGGCATAATTAAAACATACCTCACCCTATTCTTCCTCTCAACAACACTAGCTGTTCT ACTAACGTTGGCCTAAACTGCTCGAAGCGCCCCCCGACTAAGACCCCGTGTTAATTCCAACACCACAAAA AGTGTCAATAGCAGTACCCACGCACACGCGATTAACATTCCCCCTCCGTGAGAGTATATCAACGCCACCC CACTTGTATCCCCACGCAATACAGAAAACTCCTTAAACTCATCCACCGCTACCCATGAAGCTTCGTACCA CCCACCCCAGAATAAACCTGCCACCAACACCACCCCCACCGTGTACACCACCACGTATCCCAAAACCGAA CGATCCCCTCAAGACTCCGGAAAAGGCTCAGCAGCCAAGGCCGCTGAATAAGCAAATACCACAAGCATTC CCCCCAAGTAAATCAAAAATAACACCAGAGACAAGAAAGAGCCCCCATGACCCACCAAAACCCCGCAACC TACGCCCGCTGCTACAACCAATCCCAAAGCAGCAAAGTAGGGTGCAGGGTTAGACGCAACAGCTACAAGC CCTAAAACCAACCCTAAAAGAAACAAAGACACAAGATAAGTCATAATTCCTGCTCGGACTCTAACCGAAA CTAATGACTTGAAAAACCACCGTTGTTATTCAACTACAAGAACCTAATGGCCAACCTCCGAAAAACCCAC CCACTCCTAAAAATCGCTAATGACGCACTAGTCGACCTCCCAGCACCTTCTAACATCTCAGTCTGATGAA ACTTTGGCTCACTCCTAGGCCTATGTTTAGCTACCCAAATTCTTACCGGGCTCTTCCTAGCCATGCACTA TACCTCCGACATTTCAACAGCTTTCTCCTCTGTCTGCCACATCTGCCGAGATGTAAGTTACGGCTGGCTC ATTCGAAACATCCATGCCAACGGAGCATCTTTCTTTTTTATTTGTATTTATATACATATCGCCCGAGGAC TTTATTACGGTTCATACCTGTACAAAGAAACCTGGAATATCGGAGTTGTACTTTTACTTCTCACTATAAT AACTGCCTTTGTAGGCTACGTTCTCCCGTGAGGACAAATATCGTTCTGAGGGGCCACTGTAATTACAAAC CTCCTCTCAGCTGTACCCTACGTAGGGGGCGCCCTAGTACAATGAATTTGAGGGGGGTTCTCTGTTGACA ATGCCACTCTAACACGATTTTTCGCCTTTCACTTCCTATTCCCTTTCGTCATTGCAGCCGCTACAGTCCT TCACCTTCTGTTCCTTCATGAAACAGGATCTAACAACCCTGCAGGAATTAACTCCGATGCCGATAAAATC TCGTTCCATCCTTACTTCTCATACAAAGATCTCCTAGGATTCGTAGCCATACTTCTTGGTCTAACATCCT TAGCTCTCTTTGCACCAAATCTCCTAGGGGACCCAGACAATTTTACTCCAGCCAACCCCCTAGTCACCCC ACCTCATATTAAACCAGAGTGGTACTTCCTATTCGCTTACGCAATCTTACGCTCCATCCCCAACAAGCTA GGAGGGGTACTCGCCCTTTTATTCTCAATCCTTGTCCTTATGGTTGTCCCTATTCTACACACTTCTAAAC AACGAGGACTAACCTTTCGACCACTAACCCAATTCTTATTTTGGGCCCTAGTAGCAGATATACTTATCCT CACCTGAATCGGAGGCATACCCGTAGAACACCCCTTCATTATTATTGGCCAAGTTGCCTCTGTAATTTAC TTCGCCATCTTCCTAGTTCTTTCCCCCTTAGCCGGCTGGGCCGAAAATAAAGCCCTCCAATGAGCCTGCC CTAGTAGCTCAGCGCCAGAGCGCCGGTCTTGTAATCCGGAAGTCGGAGGTTAAAACCCTCCCTAGTGCTC AGAGAAGGGAGATTTTAACTCCCACCCTTAACTCCCAAAGCTAAGATTCTAAATTAAACTATCCTCTG
Contact: Vadim E. Fraifeld, MD, PhD
Head: Lab for the Biology of Aging, The Shraga Segal Department of Microbiology, Immunology and Genetics, Faculty of Health Sciences, Ben-Gurion University of the Negev
P.O. Box 653, Beer-Sheva 8410501, Israel
Email:
Head: Lab for the Biology of Aging, The Shraga Segal Department of Microbiology, Immunology and Genetics, Faculty of Health Sciences, Ben-Gurion University of the Negev
P.O. Box 653, Beer-Sheva 8410501, Israel
Email:
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If you would like to cite this database please use:
Toren D, Barzilay T, Tacutu R, Lehmann G, Muradian KK, Fraifeld VE. MitoAge: a database for comparative analysis of mitochondrial DNA, with a special focus on animal longevity. Nucleic Acids Res. 2016; 44(D1):D1262-5.
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