Viewing data for Pseudotriton ruber
| Scientific name | Pseudotriton ruber |
| Common name | Northern red salamander |
| Maximum lifespan | 20.10 years (Pseudotriton ruber@AnAge) |
| Total mtDNA (size: 16661 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 6023 | 10634 | 3808 | 2215 | 4886 | 5748 |
| Base content per 1 kb (bases) | 362 | 638 | 229 | 133 | 293 | 345 |
| Base content (%) | 36.2% | 63.8% | ||||
| Total protein-coding genes (size: 11323 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 4039 | 7283 | 2661 | 1378 | 3508 | 3775 |
| Base content per 1 kb (bases) | 357 | 643 | 235 | 122 | 310 | 333 |
| Base content (%) | 35.7% | 64.3% | ||||
| D-loop (size: 767 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 269 | 498 | 164 | 105 | 250 | 248 |
| Base content per 1 kb (bases) | 351 | 649 | 214 | 137 | 326 | 323 |
| Base content (%) | 35.1% | 64.9% | ||||
| Total tRNA-coding genes (size: 1521 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 564 | 957 | 333 | 231 | 423 | 534 |
| Base content per 1 kb (bases) | 371 | 629 | 219 | 152 | 278 | 351 |
| Base content (%) | 37.1% | 62.9% | ||||
| Total rRNA-coding genes (size: 2453 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 932 | 1518 | 512 | 420 | 562 | 956 |
| Base content per 1 kb (bases) | 380 | 619 | 209 | 171 | 229 | 390 |
| Base content (%) | 38.0% | 61.9% | ||||
| 12S rRNA gene (size: 912 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 360 | 552 | 202 | 158 | 203 | 349 |
| Base content per 1 kb (bases) | 395 | 605 | 221 | 173 | 223 | 383 |
| Base content (%) | 39.5% | 60.5% | ||||
| 16S rRNA gene (size: 1541 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 572 | 966 | 310 | 262 | 359 | 607 |
| Base content per 1 kb (bases) | 371 | 627 | 201 | 170 | 233 | 394 |
| Base content (%) | 37.1% | 62.7% | ||||
| ATP6 (size: 684 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 240 | 444 | 174 | 66 | 219 | 225 |
| Base content per 1 kb (bases) | 351 | 649 | 254 | 96 | 320 | 329 |
| Base content (%) | 35.1% | 64.9% | ||||
| ATP8 (size: 165 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 51 | 114 | 41 | 10 | 46 | 68 |
| Base content per 1 kb (bases) | 309 | 691 | 248 | 61 | 279 | 412 |
| Base content (%) | 30.9% | 69.1% | ||||
| COX1 (size: 1554 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 589 | 965 | 343 | 246 | 507 | 458 |
| Base content per 1 kb (bases) | 379 | 621 | 221 | 158 | 326 | 295 |
| Base content (%) | 37.9% | 62.1% | ||||
| COX2 (size: 682 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 258 | 424 | 161 | 97 | 194 | 230 |
| Base content per 1 kb (bases) | 378 | 622 | 236 | 142 | 284 | 337 |
| Base content (%) | 37.8% | 62.2% | ||||
| COX3 (size: 784 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 309 | 475 | 191 | 118 | 250 | 225 |
| Base content per 1 kb (bases) | 394 | 606 | 244 | 151 | 319 | 287 |
| Base content (%) | 39.4% | 60.6% | ||||
| CYTB (size: 1142 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 404 | 738 | 260 | 144 | 375 | 363 |
| Base content per 1 kb (bases) | 354 | 646 | 228 | 126 | 328 | 318 |
| Base content (%) | 35.4% | 64.6% | ||||
| ND1 (size: 957 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 349 | 608 | 229 | 120 | 294 | 314 |
| Base content per 1 kb (bases) | 365 | 635 | 239 | 125 | 307 | 328 |
| Base content (%) | 36.5% | 63.5% | ||||
| ND2 (size: 1041 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 336 | 705 | 239 | 97 | 319 | 386 |
| Base content per 1 kb (bases) | 323 | 677 | 230 | 93 | 306 | 371 |
| Base content (%) | 32.3% | 67.7% | ||||
| ND3 (size: 348 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 125 | 223 | 82 | 43 | 122 | 101 |
| Base content per 1 kb (bases) | 359 | 641 | 236 | 124 | 351 | 290 |
| Base content (%) | 35.9% | 64.1% | ||||
| ND4 (size: 1374 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 476 | 897 | 323 | 153 | 432 | 465 |
| Base content per 1 kb (bases) | 346 | 653 | 235 | 111 | 314 | 338 |
| Base content (%) | 34.6% | 65.3% | ||||
| ND4L (size: 297 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 103 | 194 | 71 | 32 | 97 | 97 |
| Base content per 1 kb (bases) | 347 | 653 | 239 | 108 | 327 | 327 |
| Base content (%) | 34.7% | 65.3% | ||||
| ND5 (size: 1809 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 618 | 1191 | 413 | 205 | 563 | 628 |
| Base content per 1 kb (bases) | 342 | 658 | 228 | 113 | 311 | 347 |
| Base content (%) | 34.2% | 65.8% | ||||
| ND6 (size: 519 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 189 | 330 | 138 | 51 | 101 | 229 |
| Base content per 1 kb (bases) | 364 | 636 | 266 | 98 | 195 | 441 |
| Base content (%) | 36.4% | 63.6% | ||||
| ATP6 (size: 684 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
Amino acid frequencies:
Glycine (Gly, G)
n = 12 (5.29%) 
Alanine (Ala, A)
n = 14 (6.17%) 
Serine (Ser, S)
n = 11 (4.85%) 
Threonine (Thr, T)
n = 25 (11.01%) 
Cysteine (Cys, C)
n = 0 (0%) 
Valine (Val, V)
n = 10 (4.41%) 
Leucine (Leu, L)
n = 59 (25.99%) 
Isoleucine (Ile, I)
n = 16 (7.05%) 
Methionine (Met, M)
n = 13 (5.73%) 
Proline (Pro, P)
n = 15 (6.61%) 
Phenylalanine (Phe, F)
n = 10 (4.41%) 
Tyrosine (Tyr, Y)
n = 4 (1.76%) 
Tryptophan (Trp, W)
n = 4 (1.76%) 
Aspartic acid (Asp, D)
n = 1 (0.44%) 
Glutamic acid (Glu, E)
n = 4 (1.76%) 
Asparagine (Asn, N)
n = 8 (3.52%) 
Glutamine (Gln, Q)
n = 10 (4.41%) 
Histidine (His, H)
n = 4 (1.76%) 
Lysine (Lys, K)
n = 3 (1.32%) 
Arginine (Arg, R)
n = 4 (1.76%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 11 | 5 | 12 | 12 | 7 | 16 | 0 | 24 | 10 | 0 | 2 | 4 | 3 | 1 | 9 | 1 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 1 | 0 | 0 | 2 | 3 | 9 | 0 | 3 | 3 | 6 | 0 | 2 | 0 | 13 | 0 | 5 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 10 | 10 | 0 | 4 | 1 | 3 | 0 | 0 | 3 | 3 | 1 | 0 | 0 | 4 | 4 | 2 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 2 | 4 | 0 | 1 | 0 | 3 | 0 | 0 | 0 | 4 | 0 | 0 | 0 | 1 | 0 | 4 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 41 | 68 | 68 | 51 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 23 | 62 | 35 | 108 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 2 | 44 | 122 | 60 | ||||||||||||
| ATP8 (size: 165 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: MPQLNPDPWFFIFFTSWFIYLIILMPKTSNLKMPKEPMTQNNKNKTEPLTWPWI* | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 0 (0%)
Alanine (Ala, A)
n = 0 (0%)
Serine (Ser, S)
n = 2 (3.7%)
Threonine (Thr, T)
n = 5 (9.26%)
Cysteine (Cys, C)
n = 0 (0%)
Valine (Val, V)
n = 0 (0%)
Leucine (Leu, L)
n = 5 (9.26%)
Isoleucine (Ile, I)
n = 5 (9.26%)
Methionine (Met, M)
n = 4 (7.41%)
Proline (Pro, P)
n = 8 (14.81%)
Phenylalanine (Phe, F)
n = 5 (9.26%)
Tyrosine (Tyr, Y)
n = 1 (1.85%)
Tryptophan (Trp, W)
n = 4 (7.41%)
Aspartic acid (Asp, D)
n = 1 (1.85%)
Glutamic acid (Glu, E)
n = 2 (3.7%)
Asparagine (Asn, N)
n = 5 (9.26%)
Glutamine (Gln, Q)
n = 2 (3.7%)
Histidine (His, H)
n = 0 (0%)
Lysine (Lys, K)
n = 5 (9.26%)
Arginine (Arg, R)
n = 0 (0%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 3 | 2 | 3 | 0 | 1 | 1 | 0 | 3 | 2 | 0 | 0 | 0 | 0 | 0 | 4 | 1 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 3 | 4 | 0 | 1 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 2 | 2 | 0 | 1 | 0 | 0 | 0 | 0 | 1 | 1 | 0 | 0 | 0 | 1 | 4 | 0 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 0 | 2 | 0 | 0 | 1 | 4 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 4 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 3 | 12 | 25 | 15 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 5 | 14 | 17 | 19 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 2 | 15 | 26 | 12 | ||||||||||||
| COX1 (size: 1554 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 46 (8.9%)
Alanine (Ala, A)
n = 42 (8.12%)
Serine (Ser, S)
n = 32 (6.19%)
Threonine (Thr, T)
n = 38 (7.35%)
Cysteine (Cys, C)
n = 1 (0.19%)
Valine (Val, V)
n = 34 (6.58%)
Leucine (Leu, L)
n = 63 (12.19%)
Isoleucine (Ile, I)
n = 42 (8.12%)
Methionine (Met, M)
n = 31 (6.0%)
Proline (Pro, P)
n = 28 (5.42%)
Phenylalanine (Phe, F)
n = 39 (7.54%)
Tyrosine (Tyr, Y)
n = 19 (3.68%)
Tryptophan (Trp, W)
n = 17 (3.29%)
Aspartic acid (Asp, D)
n = 15 (2.9%)
Glutamic acid (Glu, E)
n = 10 (1.93%)
Asparagine (Asn, N)
n = 17 (3.29%)
Glutamine (Gln, Q)
n = 8 (1.55%)
Histidine (His, H)
n = 18 (3.48%)
Lysine (Lys, K)
n = 8 (1.55%)
Arginine (Arg, R)
n = 9 (1.74%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 34 | 8 | 29 | 19 | 3 | 15 | 0 | 24 | 8 | 0 | 10 | 7 | 16 | 1 | 25 | 14 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 2 | 1 | 0 | 13 | 13 | 15 | 1 | 5 | 10 | 21 | 10 | 11 | 2 | 14 | 1 | 7 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 8 | 22 | 1 | 6 | 6 | 16 | 0 | 0 | 4 | 14 | 5 | 2 | 2 | 9 | 8 | 9 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 9 | 9 | 1 | 5 | 10 | 8 | 0 | 0 | 0 | 9 | 0 | 1 | 0 | 0 | 0 | 15 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 147 | 100 | 141 | 130 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 78 | 136 | 95 | 209 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 21 | 107 | 222 | 168 | ||||||||||||
| COX2 (size: 682 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 8 (3.54%)
Alanine (Ala, A)
n = 17 (7.52%)
Serine (Ser, S)
n = 18 (7.96%)
Threonine (Thr, T)
n = 16 (7.08%)
Cysteine (Cys, C)
n = 2 (0.88%)
Valine (Val, V)
n = 12 (5.31%)
Leucine (Leu, L)
n = 25 (11.06%)
Isoleucine (Ile, I)
n = 22 (9.73%)
Methionine (Met, M)
n = 15 (6.64%)
Proline (Pro, P)
n = 14 (6.19%)
Phenylalanine (Phe, F)
n = 10 (4.42%)
Tyrosine (Tyr, Y)
n = 7 (3.1%)
Tryptophan (Trp, W)
n = 5 (2.21%)
Aspartic acid (Asp, D)
n = 10 (4.42%)
Glutamic acid (Glu, E)
n = 13 (5.75%)
Asparagine (Asn, N)
n = 8 (3.54%)
Glutamine (Gln, Q)
n = 9 (3.98%)
Histidine (His, H)
n = 7 (3.1%)
Lysine (Lys, K)
n = 3 (1.33%)
Arginine (Arg, R)
n = 6 (2.65%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 17 | 5 | 14 | 1 | 4 | 11 | 1 | 7 | 8 | 1 | 2 | 4 | 5 | 1 | 6 | 4 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 1 | 2 | 0 | 5 | 5 | 7 | 0 | 1 | 2 | 4 | 1 | 2 | 3 | 9 | 0 | 2 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 2 | 12 | 0 | 5 | 2 | 7 | 0 | 1 | 3 | 6 | 1 | 0 | 1 | 4 | 4 | 3 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 4 | 9 | 4 | 6 | 4 | 2 | 1 | 1 | 0 | 5 | 0 | 0 | 0 | 0 | 0 | 5 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 60 | 53 | 68 | 46 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 25 | 61 | 57 | 84 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 11 | 47 | 105 | 64 | ||||||||||||
| COX3 (size: 784 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 20 (7.69%)
Alanine (Ala, A)
n = 17 (6.54%)
Serine (Ser, S)
n = 17 (6.54%)
Threonine (Thr, T)
n = 21 (8.08%)
Cysteine (Cys, C)
n = 2 (0.77%)
Valine (Val, V)
n = 15 (5.77%)
Leucine (Leu, L)
n = 33 (12.69%)
Isoleucine (Ile, I)
n = 19 (7.31%)
Methionine (Met, M)
n = 10 (3.85%)
Proline (Pro, P)
n = 12 (4.62%)
Phenylalanine (Phe, F)
n = 25 (9.62%)
Tyrosine (Tyr, Y)
n = 10 (3.85%)
Tryptophan (Trp, W)
n = 12 (4.62%)
Aspartic acid (Asp, D)
n = 5 (1.92%)
Glutamic acid (Glu, E)
n = 10 (3.85%)
Asparagine (Asn, N)
n = 5 (1.92%)
Glutamine (Gln, Q)
n = 7 (2.69%)
Histidine (His, H)
n = 15 (5.77%)
Lysine (Lys, K)
n = 2 (0.77%)
Arginine (Arg, R)
n = 4 (1.54%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 13 | 6 | 9 | 8 | 3 | 10 | 1 | 11 | 7 | 0 | 6 | 2 | 6 | 1 | 15 | 10 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 1 | 1 | 1 | 2 | 8 | 7 | 0 | 0 | 6 | 11 | 3 | 2 | 1 | 8 | 1 | 4 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 7 | 10 | 0 | 4 | 3 | 5 | 1 | 1 | 3 | 10 | 0 | 0 | 0 | 2 | 3 | 3 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 12 | 9 | 1 | 2 | 3 | 2 | 0 | 1 | 0 | 3 | 0 | 0 | 0 | 0 | 0 | 12 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 67 | 60 | 61 | 73 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 42 | 63 | 54 | 102 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 9 | 68 | 110 | 74 | ||||||||||||
| CYTB (size: 1142 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 27 (7.12%)
Alanine (Ala, A)
n = 26 (6.86%)
Serine (Ser, S)
n = 23 (6.07%)
Threonine (Thr, T)
n = 27 (7.12%)
Cysteine (Cys, C)
n = 3 (0.79%)
Valine (Val, V)
n = 16 (4.22%)
Leucine (Leu, L)
n = 54 (14.25%)
Isoleucine (Ile, I)
n = 41 (10.82%)
Methionine (Met, M)
n = 17 (4.49%)
Proline (Pro, P)
n = 24 (6.33%)
Phenylalanine (Phe, F)
n = 25 (6.6%)
Tyrosine (Tyr, Y)
n = 15 (3.96%)
Tryptophan (Trp, W)
n = 11 (2.9%)
Aspartic acid (Asp, D)
n = 8 (2.11%)
Glutamic acid (Glu, E)
n = 7 (1.85%)
Asparagine (Asn, N)
n = 18 (4.75%)
Glutamine (Gln, Q)
n = 7 (1.85%)
Histidine (His, H)
n = 13 (3.43%)
Lysine (Lys, K)
n = 10 (2.64%)
Arginine (Arg, R)
n = 8 (2.11%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 30 | 11 | 16 | 14 | 8 | 13 | 0 | 19 | 6 | 1 | 6 | 1 | 8 | 1 | 20 | 5 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 1 | 2 | 1 | 7 | 6 | 13 | 0 | 1 | 3 | 19 | 4 | 4 | 2 | 16 | 2 | 2 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 11 | 14 | 0 | 6 | 4 | 11 | 0 | 0 | 2 | 13 | 2 | 0 | 0 | 13 | 5 | 4 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 9 | 7 | 0 | 4 | 4 | 10 | 0 | 1 | 1 | 6 | 0 | 0 | 0 | 0 | 0 | 11 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 84 | 87 | 115 | 94 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 51 | 98 | 78 | 153 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 9 | 75 | 169 | 127 | ||||||||||||
| ND1 (size: 957 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 17 (5.35%)
Alanine (Ala, A)
n = 25 (7.86%)
Serine (Ser, S)
n = 26 (8.18%)
Threonine (Thr, T)
n = 23 (7.23%)
Cysteine (Cys, C)
n = 1 (0.31%)
Valine (Val, V)
n = 14 (4.4%)
Leucine (Leu, L)
n = 59 (18.55%)
Isoleucine (Ile, I)
n = 22 (6.92%)
Methionine (Met, M)
n = 21 (6.6%)
Proline (Pro, P)
n = 22 (6.92%)
Phenylalanine (Phe, F)
n = 18 (5.66%)
Tyrosine (Tyr, Y)
n = 11 (3.46%)
Tryptophan (Trp, W)
n = 7 (2.2%)
Aspartic acid (Asp, D)
n = 3 (0.94%)
Glutamic acid (Glu, E)
n = 11 (3.46%)
Asparagine (Asn, N)
n = 12 (3.77%)
Glutamine (Gln, Q)
n = 7 (2.2%)
Histidine (His, H)
n = 4 (1.26%)
Lysine (Lys, K)
n = 7 (2.2%)
Arginine (Arg, R)
n = 8 (2.52%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 16 | 6 | 20 | 8 | 4 | 24 | 0 | 23 | 6 | 1 | 2 | 4 | 7 | 1 | 15 | 3 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 1 | 0 | 1 | 4 | 11 | 9 | 1 | 0 | 5 | 9 | 3 | 2 | 3 | 17 | 0 | 4 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 3 | 16 | 0 | 6 | 4 | 11 | 0 | 1 | 4 | 10 | 1 | 2 | 0 | 6 | 6 | 0 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 4 | 11 | 0 | 1 | 2 | 7 | 0 | 3 | 0 | 3 | 2 | 0 | 0 | 0 | 1 | 5 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 70 | 77 | 90 | 82 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 38 | 91 | 56 | 134 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 12 | 61 | 168 | 78 | ||||||||||||
| ND2 (size: 1041 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 13 (3.76%)
Alanine (Ala, A)
n = 26 (7.51%)
Serine (Ser, S)
n = 29 (8.38%)
Threonine (Thr, T)
n = 40 (11.56%)
Cysteine (Cys, C)
n = 0 (0%)
Valine (Val, V)
n = 5 (1.45%)
Leucine (Leu, L)
n = 63 (18.21%)
Isoleucine (Ile, I)
n = 33 (9.54%)
Methionine (Met, M)
n = 32 (9.25%)
Proline (Pro, P)
n = 21 (6.07%)
Phenylalanine (Phe, F)
n = 14 (4.05%)
Tyrosine (Tyr, Y)
n = 6 (1.73%)
Tryptophan (Trp, W)
n = 11 (3.18%)
Aspartic acid (Asp, D)
n = 4 (1.16%)
Glutamic acid (Glu, E)
n = 6 (1.73%)
Asparagine (Asn, N)
n = 12 (3.47%)
Glutamine (Gln, Q)
n = 10 (2.89%)
Histidine (His, H)
n = 5 (1.45%)
Lysine (Lys, K)
n = 12 (3.47%)
Arginine (Arg, R)
n = 4 (1.16%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 28 | 5 | 29 | 12 | 3 | 17 | 2 | 29 | 9 | 1 | 2 | 0 | 3 | 0 | 13 | 1 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 3 | 0 | 0 | 4 | 13 | 9 | 0 | 1 | 1 | 11 | 0 | 0 | 2 | 19 | 0 | 6 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 9 | 24 | 1 | 7 | 3 | 12 | 0 | 2 | 5 | 5 | 1 | 0 | 0 | 5 | 7 | 1 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 4 | 6 | 0 | 2 | 2 | 11 | 1 | 1 | 0 | 3 | 0 | 0 | 0 | 1 | 0 | 11 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 54 | 74 | 136 | 83 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 35 | 109 | 56 | 147 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 8 | 56 | 194 | 89 | ||||||||||||
| ND3 (size: 1041 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 13 (3.76%)
Alanine (Ala, A)
n = 26 (7.51%)
Serine (Ser, S)
n = 29 (8.38%)
Threonine (Thr, T)
n = 40 (11.56%)
Cysteine (Cys, C)
n = 0 (0%)
Valine (Val, V)
n = 5 (1.45%)
Leucine (Leu, L)
n = 63 (18.21%)
Isoleucine (Ile, I)
n = 33 (9.54%)
Methionine (Met, M)
n = 32 (9.25%)
Proline (Pro, P)
n = 21 (6.07%)
Phenylalanine (Phe, F)
n = 14 (4.05%)
Tyrosine (Tyr, Y)
n = 6 (1.73%)
Tryptophan (Trp, W)
n = 11 (3.18%)
Aspartic acid (Asp, D)
n = 4 (1.16%)
Glutamic acid (Glu, E)
n = 6 (1.73%)
Asparagine (Asn, N)
n = 12 (3.47%)
Glutamine (Gln, Q)
n = 10 (2.89%)
Histidine (His, H)
n = 5 (1.45%)
Lysine (Lys, K)
n = 12 (3.47%)
Arginine (Arg, R)
n = 4 (1.16%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 28 | 5 | 29 | 12 | 3 | 17 | 2 | 29 | 9 | 1 | 2 | 0 | 3 | 0 | 13 | 1 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 3 | 0 | 0 | 4 | 13 | 9 | 0 | 1 | 1 | 11 | 0 | 0 | 2 | 19 | 0 | 6 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 9 | 24 | 1 | 7 | 3 | 12 | 0 | 2 | 5 | 5 | 1 | 0 | 0 | 5 | 7 | 1 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 4 | 6 | 0 | 2 | 2 | 11 | 1 | 1 | 0 | 3 | 0 | 0 | 0 | 1 | 0 | 11 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 54 | 74 | 136 | 83 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 35 | 109 | 56 | 147 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 8 | 56 | 194 | 89 | ||||||||||||
| ND4 (size: 1374 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 22 (4.81%)
Alanine (Ala, A)
n = 29 (6.35%)
Serine (Ser, S)
n = 38 (8.32%)
Threonine (Thr, T)
n = 45 (9.85%)
Cysteine (Cys, C)
n = 4 (0.88%)
Valine (Val, V)
n = 12 (2.63%)
Leucine (Leu, L)
n = 95 (20.79%)
Isoleucine (Ile, I)
n = 40 (8.75%)
Methionine (Met, M)
n = 31 (6.78%)
Proline (Pro, P)
n = 22 (4.81%)
Phenylalanine (Phe, F)
n = 17 (3.72%)
Tyrosine (Tyr, Y)
n = 12 (2.63%)
Tryptophan (Trp, W)
n = 14 (3.06%)
Aspartic acid (Asp, D)
n = 2 (0.44%)
Glutamic acid (Glu, E)
n = 11 (2.41%)
Asparagine (Asn, N)
n = 17 (3.72%)
Glutamine (Gln, Q)
n = 12 (2.63%)
Histidine (His, H)
n = 10 (2.19%)
Lysine (Lys, K)
n = 13 (2.84%)
Arginine (Arg, R)
n = 10 (2.19%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 33 | 7 | 27 | 20 | 6 | 30 | 3 | 35 | 11 | 1 | 4 | 1 | 7 | 0 | 14 | 3 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 4 | 1 | 3 | 9 | 10 | 9 | 1 | 5 | 4 | 10 | 3 | 1 | 3 | 17 | 1 | 5 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 16 | 24 | 0 | 8 | 5 | 14 | 1 | 3 | 7 | 6 | 6 | 1 | 1 | 8 | 9 | 6 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 4 | 11 | 0 | 1 | 1 | 13 | 0 | 0 | 0 | 9 | 1 | 0 | 0 | 1 | 0 | 13 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 76 | 113 | 156 | 112 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 60 | 124 | 78 | 195 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 17 | 85 | 231 | 124 | ||||||||||||
| ND4L (size: 297 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 3 (3.06%)
Alanine (Ala, A)
n = 9 (9.18%)
Serine (Ser, S)
n = 10 (10.2%)
Threonine (Thr, T)
n = 13 (13.27%)
Cysteine (Cys, C)
n = 3 (3.06%)
Valine (Val, V)
n = 1 (1.02%)
Leucine (Leu, L)
n = 21 (21.43%)
Isoleucine (Ile, I)
n = 2 (2.04%)
Methionine (Met, M)
n = 8 (8.16%)
Proline (Pro, P)
n = 2 (2.04%)
Phenylalanine (Phe, F)
n = 7 (7.14%)
Tyrosine (Tyr, Y)
n = 2 (2.04%)
Tryptophan (Trp, W)
n = 1 (1.02%)
Aspartic acid (Asp, D)
n = 1 (1.02%)
Glutamic acid (Glu, E)
n = 3 (3.06%)
Asparagine (Asn, N)
n = 2 (2.04%)
Glutamine (Gln, Q)
n = 2 (2.04%)
Histidine (His, H)
n = 4 (4.08%)
Lysine (Lys, K)
n = 2 (2.04%)
Arginine (Arg, R)
n = 2 (2.04%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 2 | 0 | 7 | 2 | 0 | 8 | 0 | 11 | 2 | 0 | 0 | 0 | 1 | 0 | 6 | 1 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 1 | 2 | 1 | 1 | 5 | 3 | 0 | 0 | 1 | 2 | 0 | 1 | 0 | 1 | 0 | 0 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 5 | 7 | 1 | 4 | 2 | 2 | 0 | 1 | 1 | 2 | 0 | 1 | 0 | 0 | 2 | 3 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 1 | 2 | 1 | 1 | 0 | 2 | 0 | 0 | 0 | 2 | 0 | 0 | 0 | 1 | 0 | 0 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 17 | 20 | 29 | 33 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 11 | 32 | 17 | 39 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 4 | 19 | 51 | 25 | ||||||||||||
| ND5 (size: 1809 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 30 (4.98%)
Alanine (Ala, A)
n = 40 (6.64%)
Serine (Ser, S)
n = 46 (7.64%)
Threonine (Thr, T)
n = 65 (10.8%)
Cysteine (Cys, C)
n = 7 (1.16%)
Valine (Val, V)
n = 17 (2.82%)
Leucine (Leu, L)
n = 93 (15.45%)
Isoleucine (Ile, I)
n = 59 (9.8%)
Methionine (Met, M)
n = 43 (7.14%)
Proline (Pro, P)
n = 25 (4.15%)
Phenylalanine (Phe, F)
n = 38 (6.31%)
Tyrosine (Tyr, Y)
n = 9 (1.5%)
Tryptophan (Trp, W)
n = 11 (1.83%)
Aspartic acid (Asp, D)
n = 12 (1.99%)
Glutamic acid (Glu, E)
n = 11 (1.83%)
Asparagine (Asn, N)
n = 31 (5.15%)
Glutamine (Gln, Q)
n = 19 (3.16%)
Histidine (His, H)
n = 10 (1.66%)
Lysine (Lys, K)
n = 27 (4.49%)
Arginine (Arg, R)
n = 9 (1.5%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 43 | 16 | 41 | 20 | 9 | 20 | 3 | 38 | 17 | 2 | 7 | 3 | 6 | 1 | 28 | 10 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 2 | 4 | 3 | 8 | 16 | 15 | 1 | 2 | 8 | 17 | 3 | 5 | 1 | 19 | 0 | 11 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 18 | 33 | 3 | 9 | 6 | 18 | 1 | 4 | 8 | 2 | 7 | 2 | 3 | 17 | 14 | 3 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 7 | 10 | 1 | 6 | 6 | 24 | 3 | 3 | 2 | 3 | 1 | 0 | 0 | 1 | 0 | 9 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 110 | 115 | 237 | 141 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 69 | 164 | 120 | 250 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 26 | 134 | 271 | 172 | ||||||||||||
| ND6 (size: 519 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 25 (14.53%)
Alanine (Ala, A)
n = 13 (7.56%)
Serine (Ser, S)
n = 13 (7.56%)
Threonine (Thr, T)
n = 2 (1.16%)
Cysteine (Cys, C)
n = 3 (1.74%)
Valine (Val, V)
n = 27 (15.7%)
Leucine (Leu, L)
n = 26 (15.12%)
Isoleucine (Ile, I)
n = 8 (4.65%)
Methionine (Met, M)
n = 7 (4.07%)
Proline (Pro, P)
n = 4 (2.33%)
Phenylalanine (Phe, F)
n = 14 (8.14%)
Tyrosine (Tyr, Y)
n = 9 (5.23%)
Tryptophan (Trp, W)
n = 5 (2.91%)
Aspartic acid (Asp, D)
n = 3 (1.74%)
Glutamic acid (Glu, E)
n = 5 (2.91%)
Asparagine (Asn, N)
n = 3 (1.74%)
Glutamine (Gln, Q)
n = 1 (0.58%)
Histidine (His, H)
n = 0 (0%)
Lysine (Lys, K)
n = 1 (0.58%)
Arginine (Arg, R)
n = 3 (1.74%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 8 | 0 | 3 | 6 | 0 | 1 | 1 | 13 | 0 | 1 | 14 | 0 | 11 | 2 | 14 | 0 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 4 | 3 | 0 | 8 | 1 | 4 | 0 | 6 | 2 | 10 | 7 | 1 | 0 | 1 | 2 | 1 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 0 | 1 | 0 | 9 | 0 | 2 | 1 | 1 | 0 | 9 | 0 | 1 | 5 | 2 | 1 | 0 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 0 | 2 | 3 | 3 | 0 | 1 | 0 | 1 | 0 | 2 | 0 | 1 | 0 | 0 | 0 | 4 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 73 | 16 | 23 | 61 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 38 | 31 | 22 | 82 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 27 | 4 | 56 | 86 | ||||||||||||
| Total protein-coding genes (size: 11356 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 229 (6.05%)
Alanine (Ala, A)
n = 267 (7.06%)
Serine (Ser, S)
n = 271 (7.16%)
Threonine (Thr, T)
n = 331 (8.75%)
Cysteine (Cys, C)
n = 27 (0.71%)
Valine (Val, V)
n = 165 (4.36%)
Leucine (Leu, L)
n = 621 (16.42%)
Isoleucine (Ile, I)
n = 319 (8.43%)
Methionine (Met, M)
n = 237 (6.26%)
Proline (Pro, P)
n = 205 (5.42%)
Phenylalanine (Phe, F)
n = 231 (6.11%)
Tyrosine (Tyr, Y)
n = 107 (2.83%)
Tryptophan (Trp, W)
n = 107 (2.83%)
Aspartic acid (Asp, D)
n = 68 (1.8%)
Glutamic acid (Glu, E)
n = 99 (2.62%)
Asparagine (Asn, N)
n = 140 (3.7%)
Glutamine (Gln, Q)
n = 96 (2.54%)
Histidine (His, H)
n = 90 (2.38%)
Lysine (Lys, K)
n = 94 (2.48%)
Arginine (Arg, R)
n = 69 (1.82%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 244 | 75 | 214 | 130 | 52 | 170 | 12 | 245 | 88 | 8 | 55 | 27 | 74 | 9 | 176 | 55 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 23 | 16 | 11 | 67 | 93 | 103 | 4 | 24 | 46 | 125 | 34 | 33 | 20 | 145 | 7 | 53 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 93 | 179 | 6 | 71 | 37 | 103 | 4 | 15 | 41 | 83 | 24 | 9 | 12 | 72 | 68 | 34 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 56 | 88 | 11 | 35 | 33 | 88 | 6 | 11 | 4 | 50 | 4 | 2 | 0 | 7 | 1 | 98 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 828 | 824 | 1179 | 952 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 490 | 1018 | 702 | 1573 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 150 | 735 | 1779 | 1119 | ||||||||||||
>NC_006332.1 Pseudotriton ruber mitochondrion, complete genome CTAGTGTAGCTTAAACTTAAAGCGCGGCACTGAAAATGCCAAGACAGATACTAATAAATCTCGCAAGCAT TAAAGACTTGGTCCTGATCTTAATGTTAGTTCAAATTATATTTATACATGCAAGTTTCAACACCCCAGTG AGAATGCCCACATTGCCAATTAGCAACAGCGGAGCTGGTATCAGGCACAAATAACCCATAACACCTTGCT AAGCCACACCCACACGGGAATTCAGCAGTAATAAACATTGAATAATAAGTGAAAGCTTGATTCAGCAATA ATTTAATAAAGTCGGTAAACCTCGTGCCAGCCACCGCGGTTATACGAGGGACTTAAACTAACATACCCGG CCCAAAGAGCAGTTAGAGAATATAATAATAGAAACGAAAGACCGCTAAGCCGTCGTACACATAAGCAAAC TATAAGTCCATAAATGAAAATTATTCTATTACCCTTGAACCTACTACAGCCAGGAAACAAACTGGGATTA GATACCCCACTATGCCTGACCACAAACTTTGGAAACACCCGCCAGACTACTACGAGCCACAGCTTAAAAC TCAAAGGACTTGGCGGTGCTTTATATCCACCTAGAGGAGCCTGTTCTATAATCGATATTCCCCGATCAAC CTCACCACCACTTGCTAATACAGCCTATATACCACCGTCCAGCTAACCCCTTAAAGGAAAAACAGTAAGC AAAATAACTTTTAGTAAAAAAGTCAGGTCAAGGTGTAGCACATATGGTGGAAAGAAATGGGCTACATTTT CTAAACAGAAAACACGAAATAATTTATGAAATAAAATATGAAGGAGGATTTAGCAGTAAAAAGAAAAAAG AGTGTTCTTTTAAAGCAGGCAATAAAGCACGCACACACCGCCCGTCACCCTCATCAAATATAACAATTTA AATAAAATAATATATAAATAAGAAGAGGAAAGTCGTAACATGGTAAGCCTACCGGAAGGTGGTCTTGGAC ACAGGATATAACTTAAATAAAGTATTTTGCTTACACCAAAAACATATCTATTAAACCAGATTATCCTGAG TTATAAAACTAGCCTATTTACCTAATCACCACCTCCTTTTACAAAAACCATTTTTAAAAGTTAGTATGGG CGACAGAAAACCTCTTAGCGCAATAGATATAGTACTGCAAAGGAAAAATGAAATAGAAATGAAATAAACA TAAAAACATAATAAAGCAAAGACTAAAACCTATACCTTTTGCATGATGGTCTAGCAAGTCCAACCCGGCA AAAAGAACTTTAACCGGATACCCCGAAACCAAACGAGCTACCCTAAGGCAGCAAACTGAGCGAACCCTCC TCTGTAGCAAAAGAGCGGGAAGACCTTAAGGTAGAGGCGAAAAACCAAACGAGTTTGGATTTAGCTGGTT ACTTGAGAAAGAATTTAGTTCAACTAAAAGTAATAACCTCCACAAAAAGAAAAGCTAGTACTTTTATTAT AATTAACCGAGGTACAGCCCCGTTAATAAAGGAAACAACCTATATAAATGAATAAAGATTATAATTATAA GGGGAAAAAGCCTAGTAGGCCCAAAAGCAGCCACCATGAAAGCGTCAAAGCTCAACTTTTTAAAACCTAA AATAACAATAACAAATCCTAATTCACTATAATAATCAAGTTAATCTATTTTTAGAAACGCTACTACTAGA ATAAGTAATAAGGAACCTCCTCTAAAATATATCTGTAACCCGAAATGGAAAAACCACCGAGAATTAACGA AAGTAATATTAACCTTTACAAGCATGACAATAAAACAAATCGYTAACCCAACACAGGARTATTTAAGAAA GACTCAAAACCAGGGAAGGAACTCGGCAAATCTTAGAGCTTCGCCTGTTTACCAAAAACATCGCCTCTTG AACAATAAACATAAGAGGTACTGCCTGCCCAGTGACACCCGTTCAACGGCCGCGGTATCATGACCGTGCA AAGGTAGCGTAATCACYTGTCTTTTAAATAAAGACCAGTATGAATGGCAAAACGAAAACTCAACTGTCTC CCCAGGTCAGTCAATGAAATTGATCTTCCCGTGAAGAAGCGGGAATATATATACAAGACGAGAAGACCCT ATGGAGCTTTAAACCTAACTAATTTCAATTAAATAAAATTTAACCAATGATTTTTACAAAAGGTTTTAGG TTGGGGCGACCACGGGGAAGAAATTAACCCCCGAGATGAAAATAACCTAGAAAAACACTTCAAAGTAACA AAAAATTTGACATAATTGACCCAATAATTGATCAACGAACCAAGTTACCCTAGGGATAACAGCGCAATCC TCCCATAAAGTCCTTATTGACGGGTGGGTTTACGACCTCGATGTTGGATCAGGACCCCCAAATGGTGCAA CCGCTATTAAAGGTTCGTTTGTTCAACGATTAATAGTCCTACGTGATCTGAGTTCAGACCGGAGTAATCC AGGTCAGTTTCTATCTGTAAACAGACTTTTCTAGTACGAAGGGACCGAAAAAACAAGGCCTATAATTAAT TTAAGCCTTATCATCAATCTCTGAACATAAATAAAGAGAGGGACTGAGAAAAAGAAAGTCTTATATGACT TATTAAAGTGGCAGAGCCCGATAATTGCAAAAGACCTAAGTCCTTTATCCCGAGAGTTTAAATCCCTCCT TTAATTATGAGCTCAATAAGTAATATTTTATTATATATTATTCCAGTACTACTAGCAGTTGCCTTCCTAA CTCTACTTGAACGAAAAGTGTTAGGATATATACAACACCGTAAAGGCCCAAACATTGTAGGCCCCTCTGG CCTATTACAACCAATTGCAGACGGACTAAAACTATTTATTAAAGAACCAGTTCGACCTTCCACATCATCC CAGACAATATTTTTACTAATACCTATAATAGCGCTAACCCTTTCCCTATTAATTTGAATTCCACTACCAC TACCAAATACATTAACTAACCTAAACCTAGGAGTACTATTTATATTAGCCTTATCTAGCCTCGCTGTCTA CTCAATCCTAGGATCAGGATGAGCATCAAATTCAAAATATGCCCTTATCGGAGCCCTCCGGGCTGTAGCC CAAACAATCTCATATGAAGTCACACTAGGACTTATTCTTCTATGCCTTGTCCTCATAACAGGCGGATTTA TATTACCCAGCTTCAATACAACACAAGAACCAATTTGGTTTTTATTACCAGCCTGACCAATAGCTTATAT ATGATTTATTTCTACCCTAGCAGAAACAAACCGTGCACCCTTTGACCTAACAGAAGGGGAATCCGAATTA GTCTCAGGGTTTAACGTAGAATATGCTGGGGGCCCATTTGCCCTATTTTTTTTAGCAGAATATGCAAACA TTTTAATAATAAATATTTTATCTACAATTCTCTTTTTAGGAACAACCTTTTATCACATACAACCAGAACT ATCAACAATAACTTTAATCATAAAAGCCTCTGCCCTAACAATTTTATTTTTATGGGTACGTGCCTCATAT CCACGATTCCGGTATGATCAATTAATACACCTTGTATGAAAAAATTTTTTACCAATCACAATTGCAATAA CTTTACTTCACCTATCAGCCCCATCTATAACAGCAAGCATCCCACCAATATAGGACATGTGCCCGAAAGC TTAGGGTTTACCTTGATAGGGTAATATATAGAGGTTCAAACCCTCTCATTTCCCACTTTAAAAAGATAGG ACTCGAACCTACCCCGCAGGGATCAAAACCCCAAATGCACCCTCTACACCACTTTTTAAGTAAAATAAGC TAAATAAAGCTTTTGGGCCCATACCCCAAAAATGTTGGATAATCCCCTCTTTTACTAATGAGCCCATATG CCTTATCAATATTATTATCAAGCCTATCTGCCGGAACAATTATTACACTTATAAGCAACCACTGATTTCT CGCCTGAATTGGTTTAGAAATCAATACATTAGCAATAATTCCACTAATATCTAAATTACATCACCCACGA GCAACAGAAGCAGCAACAAAATACTTTTTAATACAGGCTGCTGCCTCAGCCCTACTTTTATTTGCAATTA TCTTAAACGCCTGAGAAACAGGAGAATGAACAATTATTAGTATACAAACAACTACTCCCCTATTAATACT TACAACAGCCTTAATAATTAAACTTGCAATCGCCCCATTTCACTTATGACTTCCAGATGTAATACAAGGA CTAGACCTAATAACAAGCTTAATCCTGTCAACATGACAAAAACTTGCCCCAATAGCACTTATTATTCAAA TAGACTCACAACTAAACCCAACACTACTTATCTTTCTTGGAACCTTATCTATTGCTTTAGGAGGATGAGG AGGACTTAATCAACCACAACTACGAAAAATTATAGCCTATTCCTCTACTGCTCACCTCGGATGAATAATT GTTATTTTAACATTTTCTAAGCCACTAACCATAATTAACCTCTTAGTATATCTAATAATAACCTCATCCA TATTTTTCTTAATAATTAATTTTACCTCCACCAACATTAATAAAACGGCCACCTCATGAATAAAAAATTT ATCATTAATTCCAACAATAATAATTATTTTAATATCTTTAGGCGGACTACCACCAACCTCAGGATTTATT CCAAAATGATTAATTTTAGAAGAAATAACTAAACAAGATATAATACCAATTGCAACAATTATGGCCCTAT TTGCCTTACTAAGCCTATTTTTTTATTTACGTCTAACATATGCAGTATCACTTACAACACCCCCATCACC AACCAACTCAAAAATTATGTGACGACTAAAAACAACAACCAGTCAAACTATACCAACAATAATTGTTTTA TCTACTATACTTCTGCCAATTACACCAACAATTTTAAACTTATTTTAAAAACTTAGGATAATTAAGACCA GGAGCCTTCAAAGCCCCTAGCAGAAGTTAAAATCTTCTAGTTTTTGCCTTAAGACCTGCAAGATTAACTC ACATATTCTGAATGCAACTCAGACACTTTAATTAAGCTAAGGTCTTCTAGATTAGCAGGGCTTATCCTAC GATCTTTTAGTTAACAACTAAACACCTATTTACAGGCTTTAATCTACTTCTCCCGCTTTGTTGGGGGGAA AAAGCGGGAGAAGCCCCGGCAGAAGTCATTTGCTCTATAAAGTTTGCAACTTTGTGTGCTGTACACCACG AGGCCTGGTAAGAAAAGGCTACAACCTTTATAATCGAGGCTACAACTCGACACCTATTTCGGCCACCTTA CCTGTGATAATCACTCGATGACTATTCTCAACAAACCATAAAGATATTGGCACCCTATACCTTATATTCG GGGCCTGGGCCGGCATAGTAGGCACAGCTTTAAGCCTATTAATCCGAGCAGAACTAAGCCAACCGGGTGC ACTTCTTGGAGACGACCAAATTTATAATGTAATTGTCACCGCCCATGCTTTTGTTATAATTTTCTTTATA GTTATACCAATTATAATCGGGGGCTTTGGCAATTGATTATTGCCTTTAATAATTGGAGCCCCAGACATAG CTTTCCCTCGAATAAATAATATAAGCTTCTGATTACTCCCTCCATCTCTTCTCCTACTTTTAGCCTCCTC AGGAGTTGAAGCTGGAGCAGGGACAGGATGAACAGTCTATCCTCCCCTTGCCGGAAACATAGCTCATGCA GGGGCTTCAGTAGATTTAACCATTTTCTCCCTACATTTAGCCGGCGTCTCCTCAATTTTAGGTGCTATTA ACTTTATTACAACCTCTATTAATATGAAACCACCAGCAATGTCACAATATCAAACCCCTTTATTTGTCTG ATCTGTTTTAATTACAGCTATTTTATTATTACTATCTTTACCAGTACTTGCAGCCGGAATTACAATATTA CTTACAGATCGAAACCTAAACACTACATTTTTTGACCCTGCGGGAGGGGGGGACCCAGTACTCTATCAAC ATCTATTTTGGTTTTTTGGTCACCCAGAAGTTTATATTCTTATTCTTCCTGGTTTCGGAATAATTTCACA CATTGTTACATATTATTCAACTAAAAAAGAACCCTTCGGATATATAGGCATAGTATGAGCAATAATATCA ATTGGCCTATTAGGATTTATCGTATGAGCCCATCACATATTTACAGTAGACCTTAATGTAGACACACGAG CATATTTTACCTCAGCAACAATAATTATTGCTATCCCTACAGGAGTAAAAGTATTTAGCTGATTAGCCAC GATACATGGTGGAGCAATCAAATGAGATGCAGCTATACTATGAGCACTTGGATTTATTTTTCTTTTTACT ATCGGGGGCTTAACCGGAATTGTCCTAGCCAACTCCTCCTTAGACATTGTCCTACATGATACTTACTATG TAGTTGCCCATTTCCACTACGTCCTATCAATAGGCGCTGTATTCGCTATTATAGGAGGATTTGTACACTG ATTTCCTCTTTTCTCAGGGTTTACTCTTCACCCAACATGATCAAAAATTCACTTTGGAGTAATATTTATT GGAGTTAACTTAACATTCTTCCCACAACACTTTTTAGGACTTGCAGGGATACCACGACGATATTCTGACT ACCCAGACGCTTATACCCTTTGAAATACAATTTCATCAATTGGGTCCCTAATCTCATTGGTAGCAGTTAT TATAATAATATTTATTATTTGAGAAGCCTTCGCATCAAAACGAGAAATTTTAACAACAGAACTTAATCAA ACAAACATTGAGTGATTATATGGATGTCCTCCACCTTATCACACTTTTGAAGAACCATCTTACGTTCAAA CACGACTTAATACAAGAGGAGGAGGAATTGAACCCCCATGCTTTGATTTCAAGTCAACCACATAACCAAT CTGCTACCCCCTTAGATGTTAGTAAAATATTTACAGGACCTTGTCATGGCCCAATTACTAGTTTAAACCT TGTACATCTACATGGCACACCCATCACAATTAGGCTTTCAAGACGCAGCTTCCCCTATTATAGAAGAATT ACTACACTTTCATGATCATGCCCTAATAGCAGCATTCCTGATTAGCACCCTCGTCCTCTACATTATTACT GTAATAATAACAACAAAATTAACAAACACAAATGCAATAGATGCCCAAGAGATTGAAACAGTCTGAACAA TTCTACCAGCTATTATTTTAATTGTTATTGCCCTACCCTCATTACGAATCCTATATTTAATAGATGAAAT TAACGATCCCTCCCTCACAGTTAAAGCCATCGGACACCAATGATATTGAAGCTATGAATTTACAAACTAT GAAAATCTAATATTTGACTCATATATAATTCCCACACAAGATCTCCTTCCAGGACAATTCCGTCTACTAG AAGTCGACAACCGAATAGTGGTACCAATAGAGTCTCCAATCCGAATATTGATCTCTGCTGAAGATGTCTT ACACTCATGAGCAATTCCATCAATAGGCATTAAGACAGACGCTATCCCAGGTCGACTAAATCAAACAACC TTTATTGCATCACGACCTGGAGTATTCTATGGACAGTGTTCTGAGATTTGTGGGGCTAATCATAGTTTTA TACCAATTGTAGTAGAAACAGCCCCACTAACTGAGTTCCAAAGCTGATCTTCTTCAATACTAGAATCCTC ATTAAGAAGCTAACATGGATAGCGACAGCCTTTTAAGCTGTAGCTCGGTGATTCCAACCACCCTTAATGA TATGCCTCAACTCAACCCAGACCCCTGATTCTTTATTTTTTTTACATCTTGATTTATTTATCTAATCATC TTAATACCAAAAACTAGCAACTTAAAAATACCCAAAGAACCAATAACACAAAATAACAAAAACAAGACCG AACCCTTAACCTGACCATGAATTTAAGCTTTTTTGATCAATTTATAACCCCAACCCTTATAGGTATTCCA TTAATTACTTTAGCCATAGGTTTTCCTCTTTTATTACTCTTTATATCACCAAAACACTGACAAGGAGGCC GAATCTATTCTATTCAATTATGATTTTCTCAAAACTTTACAAAACAACTTCTAATACCATTAAATACAAC AGGACATAAATGAGCACTACTCCTTACCTCTTTAATACTTTTATTAATTTCCATAAATCTACTAGGACTT CTTCCATACACCTTCACACCAACAACCCAACTATCAATAAACCTAGGATTAGCTCTTCCACTATGATTAG CAACAGTGGTTACCGGTATACGAAACCAACCAACCATATCTTTAGGCCATCTCTTACCAGAAGGAACCCC AACACTATTAATCCCAGTTCTCATTGCAATCGAAACAATTAGCCTATTTATTCGACCACTAGCACTTGGA GTACGACTCACTGCAAACTTAACAGCAGGCCACCTATTAATTCAACTAACTTCAACCGCTGTATTAACTC TTTTACCACTTATACCTACAATTGCAATCCTCACTGCAATTGTCCTACTATTATTAACCCTCCTAGAAAT CGCCGTCGCAATAATTCAAGCCTATGTCTTTGTACTTTTATTAAGCCTATATTTACAAGAAAATGTCTAA TGACTCACCAAGCCCACGCCTTCCACATAGTAGACCCAAGCCCTTGACCTCTCACAGGAGCCATCGCAGC ACTATTATTAACATCCGGCCTTATAATATGATTTCACTTCGGATCAACTATCTTAATAAACCTAGGACTA ATTATTATAATCTTAACAATAATCCAATGATGACGAGACATTATCCGAGAAAGTACATTTCAAGGACACC ACACCCTACCAGTCCAAAAAGGACTTCGATATGGCATAGTTCTTTTTATTACATCTGAAGTATTATTCTT TTTTGGGTTTTTCTGAGCTTTTTATAATTCGAGCCTGGCACCAACTCCAGAGCTAGGAGAATGTTGACCA CCCACAGGAATTTCCCCATTAGATCCGTTTGAAGTTCCATTACTTAATACCGCAGTCCTCTTAGCATCTG GAGTGACCGTTACATGAACACACCATAGCATTATAGAAGGACACTATAAAGAAGCCACCCAATCACTTCT CCTAACAGTTATTTTAGGCTTATATTTTACCCTATTACAAGCCATAGAATATTATGAAGCCCCATTCACA ATTGCAGATGGAGTTTATGGCTCAACTTTCTTTGTTGCAACCGGGTTCCACGGCCTTCATGTAATCATTG GCTCTTCATTTCTACTTATTTGCCTATTTCGTCAAATTAACTTTCACTTTACCTCTAACCACCACTTCGG ATTTGAAGCTGCCGCCTGATATTGACATTTCGTAGACGTAGTATGACTATTCCTTTATATTTCAATTTAT TGATGAGGGTCCTGTCTTTTTAGTATAAAAATACAAATGACTTCCAATCATTTAATCTTAGTAAAAATCT AAGAAAAGACAATGAACCTAATTTTACTTACATTATTATTTACAACAACTCTATCCACCATTTTAATTAT AGTCGGATTTTGACTTCCAACTAGTGCTCCAGATGCTGAAAAACTATCTCCTTATGAATGCGGATTTGAT CCATTAGGATCTGCACGCCTTCCATTTTCAATTCGATTTTTCCTAGTAGCCATCCTCTTTCTCCTGTTTG ATCTTGAAATCGCTCTTCTCCTTCCATCACCATGAGCCACTCAAACAACCCCAATAAATATATTCTTATG AGCAACTATTATCTTAATTCTCCTTACTGCTGGATTAATCTATGAATGAATACAAGGAGGCCTTGAATGA GCAGAATAAATACTTATTCTAAAAAAGACAATTGATTTCGACTCAATTAATTTTGGATTAACCCCAAAAG TATTTTATGTCCCCTACACTATTTACATTCTATTCCACATTTTTACTTAGTATTTCTGGCCTAACCCTAC ATCGAACCCATTTATTATCTGCCTTATTATGCCTAGAGGGAATAATACTAGCTATATTTTTAGCAATATC AATATGGACAAAACAAACAGAAGCCGTATCATATTTTTCTCTACCAATATTTTTATTAACCTTTTCTGCC TGTGAAGCAAGCACAGGATTAGCCTTAATAATTGCAACCACCCGAACACATAACACGGATCACTTAAAAG CCCTTAACCTACTACAATGTTAAAAATTATTATTTCAACCATAATACTAATTCCAGTAATTTGACTCTCC CCTACAAAATGAGTATGATTTAATTCCACTACCAATAGCCTATTTATTGCCATTATTAGCTTAAACCTTT TACTACAGCCACTAGAACTTATAACCATAACAAATAAATACTTAGGAGTTGATAAAATTTCATCCCCCCT ACTAATATTAACATGCTGACTTCTTCCACTAATAATTTTAGCGAGCCAAAATCACTTAAAAACCAACCCA TTAAGTCGACAACAAATATATATTTCAATACTAACAGCACTACAAGTAGCCCTTATTTTAGCCTTTTCAT CAACAGAATTAATTTTATTTTATATTACCTTTGAAACCACCCTAATCCCAACACTAATTATTATTACACG ATGGGGAAACCAAACAGAACGACTAAACGCAGGAACATATTTTTTATTCTACACCCTTGCAGGGTCATTA CCACTTTTAGTAGCATTACTTTTTCTATTAACTTCACAAAGTTCTCTATCTTTAAGCCTTTTATATTCCT CAAAAGAAATATTTTTAATAAACTCAACAAATAAAATTCTGTGACTTGGCTGCCTAACAGCTTTTATAAT TAAAATACCATTATACGGGGCCCACCTATGACTACCAAAAGCCCACGTAGAAGCTCCAGTAGCAGGATCA ATAATTTTAGCTGCTATTTTACTAAAACTAGGCGGCTATGGAATTATTCGAATTACCACAATATTTACCC CATTAATTGAACTCTCATACCCGTTCATTGTCCTTGCTTTATGAGGARTCTTAATAACAGGATTAATTTG CACCCGACAAACAGACCTAAAATCCCTCATTGCATACTCTTCTGTTAGCCACATGGGTCTAGTTGTAGCT GCTGCCCTAATTCAAACACCATGAAGCTTTGCCGGGGCAGTTATCTTAATAATCTCACATGGCCTAATCT CATCTGCATTATTCTGTTTAGCTAATATAAATTACGAACGAACACATAGTCGAACAATACTCCTAACCCG AGGTTTACAAACAACACTTCCCCTACTTGCCACTTGATGACTCCTATCTAACCTCTCAAACATAGCACTT CCCCCAACCACTAACCTATGAGGTGAACTGATAATTATGATATCGCTATTTAATTGATCTCCATGAACAA TTTTATTAACAGGACTAGGAACACTTATCACAGCCGCCTATACCCTTCATATATTTCTTATCACCCAACG GGGTCAACTTCCAAACCATTTAAAATTTACTATGCCAACCTCTACACGAGAACATAGCCTGATAGCTATA CATCTTCTACCAATAATTCTTTTAATAATAAAACCAGAATTAATCTTGGGTGGAATTTAATGTAAATATA GTTTAAACAAAACATTAGGCTGTGACCCTATTAATGAAAGTTTAACCCTTTCTATAGACCGAGAATGATT AAGAAATATAGAGACTGCTAATTATCTATTCCGCAGTTAAACTCCGCGGCGTACTCACTTTTAAAGGACA ACAGTCGTCCATTGGTCTTAGGAACCAAAACTCTTGGTGCAACTCCAAGTAAAAGCTATGGACCTTATTT TAATCCTAAGCTCATCACTTACACTATCCCTCCTCCTACTCTTTATTCCTTTAATTATTAAAACCACAGA TTGATTCACCCTTGTAAAAACATCAGTTAAACTATCCTTTATTGTCAGCACTTTGCCTCTTATAATTTTT ATTAGTAAAGGAATAGAAACTACAACTACCAACTTTAATTTTATAAACATCTACAATTTCAATTTATTCT TAAGCTTTAAACTAGACCAATACTCAATTATATTTTTACCAACCGCCTTATTTGTCACATGAGCTATCCT AGAATTTGCCATCTGATATATACACTCTGACCCTATAATTGACCGATTTTTTAAATACCTTCTACTATTT CTAATAGCAATAATAACCCTTGTTACGGCCAACAACCTTTTCCAATTATTTATTGGCTGAGAAGGTGTAG GAATTATATCGTTTTTACTTATCGGATGGTGACACGCCCGAGCTGACGCCAATACAGCCGCAATACAAGC TGTTATATACAACCGTATTGGAGATATTGGATTAATTGTTTCAATAGCTTGAATTGCAATTAATACAAAC TCATGAGAAACACAACAAATACTTATACTTATAACAAAAAACGAGGGATTTATCCCACTCTTAGGCTTAA TCTTGGCCGCAACCGGAAAGTCAGCACAATTTGGCCTCCACCCATGACTTCCAGCGGCTATAGAAGGCCC AACACCAGTATCAGCTTTATTACACTCTAGCACAATAGTCGTTGCCGGAATCTTCCTTCTAATTCGTTTC CAGCCTTTACTAGAACAAAATCCCACGGCCTTAACAACATGCTTATGCTTAGGGTCACTTACCACACTAT TTACAGCCGCATGTGCCCTCACACAAAACGACATTAAAAAAATTGTAGCCTTTTCAACATCTAGCCAATT AGGCCTTATAATAGTGACAATTGGACTGAATCAACCACAATTAGCATTCTTTCATATCTGTACTCACGCA TTCTTTAAAGCAATATTATTTTTATGTTCAGGATCCATTATCCACAGCCTCAATAATGAACAAGATATTC GTAAAATAGGGGGCTTACAAAAAATATTACCACTTACAACTTCCTGTCTTACAATTGGCAGCCTAGCATT AACAGGCACCCCATTTTTATCAGGATTTTTTTCTAAAGATGCCATCATTGAAGCAATAAACACCTCAAAT CTAAACTGCTGATCCCTCATCTTAACTTTAGTAGCAACATCTTTTACAGCCATTTACAGTTTTCGGATCA TCTTCTTTGCATCAATAAATAACCCACGATTAACACCAATAACCTTAATTAATGAAAATAATAAAATAGT TATAAACCCAATTAAACGCCTAGCATTAGGAAGTATTATTGCCGGACTTCTAATTATAATAAACATTCCA CCTATAAAACCACAAATTATAACTATACCAGGATCATTAAAAACCTCAGCCCTAATAATTACTACCTTAG GATTAATTATTGCTATAGATATAATAAAGACAACCATAAATATTAGTACAAAAACAAAACTTCATACCAT CTCTAATCTATTAGCATTCTTTCCACATATTACTCACCGCCTCTCCCCAAAAACAAAAATATTAACAGGT CAAAACCTGGCTACAATTATTACAGATTTGACCTGGTATGAAAAAGGGATACCAAAAGGACTATCAAATC AACAGCTGCCACTTATCAAAACCACCACAACTGTTCAAACTGGACTTATTAAGACATACATATCAGTATC TTTAATTTCTACCTTACTAATTTTAATTATGTCTTACAGCACGTAAAGAGCCTCGAGACAATCCTCGAGT TACCTCTAATACTACAAATAAAGCCAAAAGAAGGCCTCATCCCGATACTACTAAAAATCCTGACCCTAAA ACAAATATTGTTCCTGCCCCAATACAATCATTAACCCCACCAATAAATTTATCTTCTCCAGAAAAAAGCC CCTCAAAACCCTGTCATCCACCAACCATTACATAAATAACAACAATTCCTAATATATACATAAAAACATA CACAAAAACAGATCAGTTTCCCCAGGCTTCTGGATACGGCTCTGCTGCTAAAGAAGCAGAATAAGCAAAT ACTACTAACATTCCCCCTAAATAAATCAACAAAAGAATAAGTGACAGAAAAGAAACCCCAAAATCAACTA AAACTCAACACCCACAAACTGCACCTAACACTAAACCAAGAGCAGCATAATAAGGAGACGGATTAGAAAC AACAGCAACAAATCCTACTACCAAACCAAATAAAGCTAGAAAACTTATATAAATCATAATTCTTATTTGG ATTTAAACCAAAACCCTTGGCCTGAAAAACCAATGTTGTATTCAACTATAAAAACAATGGCCCACATTAT ACGTAAAACCCACCCTTTAATAAAAATTATTAATGGCTCTTTTATTGACCTTCCAGCTCCGTCAAACCTA TCATATTTATGAAATTTTGGATCCTTAATAGGGGTCTGCCTCATTGCACAAATCTTAACCGGACTTTTTC TAGCTATACACTATACCGCAGACACCACCTCAGCATTCTCCTCAGTAGCACACATCTGTCGAGATGTAAA TTATGGATGAATAGTACGAAATATTCATGCTAACGGGGCTTCTATCTTCTTTATTTGTATTTATATACAT ATTGGACGAGGATTATATTATGGATCATATACCTATAAAGAAACATGAAACATTGGAGTTATCCTCCTAT TTTTAGTTATAGCAACAGCATTTGTAGGATATGTTTTACCATGAGGACAAATATCCTTTTGAGGTGCAAC CGTTATCACAAACCTCCTATCAGCAATTCCATATATAGGAGATACACTTGTACAATGAATCTGAGGGGGC TTTTCAGTGGACAAAGCAACACTTACCCGATTTTTTGCCTTCCACTTTATTCTACCATTTATAATCGCCG GAGCTAGCATTGTTCATCTTCTATTTTTACATGAAACCGGATCTAATAATCCAACAGGATTAAATTCTAA TCCAGATAAAATCCCATTCCACCCATACTACTCTCTCAAAGATCTCTTAGGGCTTCTTATTCTCCTTCTA GTATTAATTATTATTTCACTTCTCACACCAAATCTTATAGGAGACCCGGAAAATTTTACTCCTGCTAACC CACTAATTACTCCCCCACACATTCAACCAGAATGATATTTTCTATTTGCATATGCAATCTTACGCTCCAT TCCAAATAAATTAGGCGGAGTAATAGCCTTATTAGCATCAATTCTAATCCTTATAACAATTCCAGCTTTA CACACCTCTAAACACCGAAGCTTATCACTTCGACCTATTACACAAACATTCTTTTGACTCTTAATTGCCA ATACAATTGTACTTACCTGAATTGGAGGACAACCAGTTGAACCCCCATTTATTGAAATTGGACAGGCAGC CTCAATCCTATATTTTATACTATTTCTACTTATTATTCCTATAACAGGAACAACAGAAAATAAATTAATA AAATGATACTGATGTAGTTTAGAAAAACATTGACCTTGTAAGTCAAAGAACGAGAACTAAAACTCTCCAA CAGTAAACGTATATGTAAATTAATATACACCACATAATACATCATGCACTAACAGCATGAGACACCCTAC AGGGTATCTCATGCCGGGCTAAGCCACATGATATATTATATACTCACTTTCAACAAAACACCTAAATAGG TAGTATATATACCAGGCTAAGCCATACACACTAATAAATTAAATGTTATATCTGCCAGGCTAAGCACATA TCACAAAAACACGCCCATATAAAATATGACATTTACATAAGCTAAGCCACATTAATAATCATACACCGTA TAGTCTGGGCCAAACGCATAAATAAATTAGTTAGTTGGTAGGAGGAGGGGAAAGTTAAAAAATGAAAACT TTTTTAATTTAACCAGGATAGGCCATGCATATTTAGAGCTGTCATCATTCGCCTAAACTACCGTTTAAAT GAAGCCACAACACACCAAAAATACACCCCAAAACACACCCAAAACACGCCTCGACACACCCAAAATACAC AAACCACCAAAAGGTAAAATCCCAATACACCAAAAAACCTTCAGTGTAAACACAATATAAAAAAATATTT TTTTCAAACGAGAGATTCCCACTCCCACTACTGACACCCAAGGCCAAAATTCTGACTTAAAACTATCGCT TGTCCTAATCTCTCAATAGTCATGTGCCGCGGGGACATATTATGTATAATAGTATATTAAACTTATTTCC CTACGGCTTTGCCTTTTAAACCCTCCTGATTTTTAATTGGACGGACGGAGGAGAAACCATCAACCCGCCC CTCAAGATACCGTGTCCAGATCTATGGACGGATATTCCGGGGGAACGACTCAGTTATTTTCAAAGGCATC TGGTTTGAATCTATGAACATACAATTAAGGGTGATTGTCATTCCAATCTAGCCGGCATATATGGAGGATG TTTTTCAACTAGATGGCCCAGGCCCCCCATAACTGATTCTTACTACATTCATTATTTTTTTTTTCTGTGA GATCAACAGACATACAGATTTATACCTGGTAAATATTAATCTAAACCTGAACATAATATGCCTATCTCTA TTTCCATCGAGATACGCATGAGTAATATATATCAATGTTTTTTTGACATAAACCTTCACTTAGTCCTCAA AAATGATAAGTGGCACTTTTACTTTTTTTTTTCAAAAATTACGATTTTTTACACCCTCACTAAAACTGAA TTTATCAATTAATTTCAAAAAAAACATGAACTTTTTTTTTTTAAGAATTAACCCCCCCCCCCCATAATTG ACTAATCAGTACTATTATTCTTTTTAGCTAACCCCAAAACTAAAAAGCCTTTATTCCCACGCCAGAGACA ACAAAAAAAAATTAAATGACAAGGTTAGTGCGAGACAACAAATTTCTCCACTAATTACATTGTGTCACAA G
Contact: Vadim E. Fraifeld, MD, PhD
Head: Lab for the Biology of Aging, The Shraga Segal Department of Microbiology, Immunology and Genetics, Faculty of Health Sciences, Ben-Gurion University of the Negev
P.O. Box 653, Beer-Sheva 8410501, Israel
Email:
Head: Lab for the Biology of Aging, The Shraga Segal Department of Microbiology, Immunology and Genetics, Faculty of Health Sciences, Ben-Gurion University of the Negev
P.O. Box 653, Beer-Sheva 8410501, Israel
Email:
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If you would like to cite this database please use:
Toren D, Barzilay T, Tacutu R, Lehmann G, Muradian KK, Fraifeld VE. MitoAge: a database for comparative analysis of mitochondrial DNA, with a special focus on animal longevity. Nucleic Acids Res. 2016; 44(D1):D1262-5.
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