Viewing data for Herpestes javanicus
| Scientific name | Herpestes javanicus |
| Common name | Javan mongoose |
| Maximum lifespan | 16.60 years (Herpestes javanicus@AnAge) |
| Total mtDNA (size: 16763 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 6674 | 10084 | 4372 | 2302 | 4505 | 5579 |
| Base content per 1 kb (bases) | 398 | 602 | 261 | 137 | 269 | 333 |
| Base content (%) | 39.8% | 60.2% | ||||
| Total protein-coding genes (size: 11341 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 4525 | 6813 | 3106 | 1419 | 3130 | 3683 |
| Base content per 1 kb (bases) | 399 | 601 | 274 | 125 | 276 | 325 |
| Base content (%) | 39.9% | 60.1% | ||||
| D-loop (size: 1318 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 543 | 775 | 351 | 192 | 363 | 412 |
| Base content per 1 kb (bases) | 412 | 588 | 266 | 146 | 275 | 313 |
| Base content (%) | 41.2% | 58.8% | ||||
| Total tRNA-coding genes (size: 1510 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 546 | 964 | 313 | 233 | 434 | 530 |
| Base content per 1 kb (bases) | 362 | 638 | 207 | 154 | 287 | 351 |
| Base content (%) | 36.2% | 63.8% | ||||
| Total rRNA-coding genes (size: 2534 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 1030 | 1502 | 584 | 446 | 566 | 936 |
| Base content per 1 kb (bases) | 406 | 593 | 230 | 176 | 223 | 369 |
| Base content (%) | 40.6% | 59.3% | ||||
| 12S rRNA gene (size: 957 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 409 | 548 | 241 | 168 | 202 | 346 |
| Base content per 1 kb (bases) | 427 | 573 | 252 | 176 | 211 | 362 |
| Base content (%) | 42.7% | 57.3% | ||||
| 16S rRNA gene (size: 1577 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 621 | 954 | 343 | 278 | 364 | 590 |
| Base content per 1 kb (bases) | 394 | 605 | 218 | 176 | 231 | 374 |
| Base content (%) | 39.4% | 60.5% | ||||
| ATP6 (size: 681 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 267 | 414 | 190 | 77 | 198 | 216 |
| Base content per 1 kb (bases) | 392 | 608 | 279 | 113 | 291 | 317 |
| Base content (%) | 39.2% | 60.8% | ||||
| ATP8 (size: 204 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 69 | 135 | 53 | 16 | 53 | 82 |
| Base content per 1 kb (bases) | 338 | 662 | 260 | 78 | 260 | 402 |
| Base content (%) | 33.8% | 66.2% | ||||
| COX1 (size: 1545 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 649 | 896 | 377 | 272 | 474 | 422 |
| Base content per 1 kb (bases) | 420 | 580 | 244 | 176 | 307 | 273 |
| Base content (%) | 42.0% | 58.0% | ||||
| COX2 (size: 684 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 252 | 432 | 160 | 92 | 192 | 240 |
| Base content per 1 kb (bases) | 368 | 632 | 234 | 135 | 281 | 351 |
| Base content (%) | 36.8% | 63.2% | ||||
| COX3 (size: 784 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 334 | 450 | 211 | 123 | 234 | 216 |
| Base content per 1 kb (bases) | 426 | 574 | 269 | 157 | 298 | 276 |
| Base content (%) | 42.6% | 57.4% | ||||
| CYTB (size: 1140 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 479 | 661 | 337 | 142 | 303 | 358 |
| Base content per 1 kb (bases) | 420 | 580 | 296 | 125 | 266 | 314 |
| Base content (%) | 42.0% | 58.0% | ||||
| ND1 (size: 957 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 396 | 561 | 283 | 113 | 256 | 305 |
| Base content per 1 kb (bases) | 414 | 586 | 296 | 118 | 268 | 319 |
| Base content (%) | 41.4% | 58.6% | ||||
| ND2 (size: 1044 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 403 | 641 | 310 | 93 | 257 | 384 |
| Base content per 1 kb (bases) | 386 | 614 | 297 | 89 | 246 | 368 |
| Base content (%) | 38.6% | 61.4% | ||||
| ND3 (size: 346 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 138 | 208 | 91 | 47 | 102 | 106 |
| Base content per 1 kb (bases) | 399 | 601 | 263 | 136 | 295 | 306 |
| Base content (%) | 39.9% | 60.1% | ||||
| ND4 (size: 1378 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 533 | 845 | 378 | 155 | 382 | 463 |
| Base content per 1 kb (bases) | 387 | 613 | 274 | 112 | 277 | 336 |
| Base content (%) | 38.7% | 61.3% | ||||
| ND4L (size: 297 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 113 | 184 | 77 | 36 | 98 | 86 |
| Base content per 1 kb (bases) | 380 | 620 | 259 | 121 | 330 | 290 |
| Base content (%) | 38.0% | 62.0% | ||||
| ND5 (size: 1821 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 716 | 1102 | 506 | 210 | 501 | 601 |
| Base content per 1 kb (bases) | 393 | 605 | 278 | 115 | 275 | 330 |
| Base content (%) | 39.3% | 60.5% | ||||
| ND6 (size: 528 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 200 | 328 | 150 | 50 | 99 | 229 |
| Base content per 1 kb (bases) | 379 | 621 | 284 | 95 | 188 | 434 |
| Base content (%) | 37.9% | 62.1% | ||||
| ATP6 (size: 681 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
Amino acid frequencies:
Glycine (Gly, G)
n = 11 (4.87%) 
Alanine (Ala, A)
n = 16 (7.08%) 
Serine (Ser, S)
n = 14 (6.19%) 
Threonine (Thr, T)
n = 21 (9.29%) 
Cysteine (Cys, C)
n = 0 (0%) 
Valine (Val, V)
n = 10 (4.42%) 
Leucine (Leu, L)
n = 42 (18.58%) 
Isoleucine (Ile, I)
n = 27 (11.95%) 
Methionine (Met, M)
n = 14 (6.19%) 
Proline (Pro, P)
n = 13 (5.75%) 
Phenylalanine (Phe, F)
n = 13 (5.75%) 
Tyrosine (Tyr, Y)
n = 2 (0.88%) 
Tryptophan (Trp, W)
n = 3 (1.33%) 
Aspartic acid (Asp, D)
n = 1 (0.44%) 
Glutamic acid (Glu, E)
n = 3 (1.33%) 
Asparagine (Asn, N)
n = 11 (4.87%) 
Glutamine (Gln, Q)
n = 9 (3.98%) 
Histidine (His, H)
n = 8 (3.54%) 
Lysine (Lys, K)
n = 4 (1.77%) 
Arginine (Arg, R)
n = 4 (1.77%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 18 | 9 | 10 | 9 | 2 | 22 | 4 | 3 | 8 | 1 | 1 | 2 | 7 | 0 | 7 | 6 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 4 | 0 | 0 | 4 | 10 | 2 | 0 | 1 | 3 | 6 | 1 | 2 | 4 | 7 | 0 | 5 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 3 | 12 | 1 | 2 | 2 | 6 | 0 | 1 | 3 | 1 | 1 | 0 | 2 | 5 | 6 | 2 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 6 | 3 | 0 | 0 | 1 | 3 | 1 | 0 | 1 | 3 | 0 | 0 | 0 | 1 | 0 | 3 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 41 | 71 | 81 | 34 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 22 | 60 | 39 | 106 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 14 | 59 | 96 | 58 | ||||||||||||
| ATP8 (size: 204 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: MPQLDTSTWFITIVSMITTLFIVFQLKLSKHLYPSNPELKSTISLKQPTPWEKKWTKIYSPLSLPQQ* | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 0 (0%)
Alanine (Ala, A)
n = 0 (0%)
Serine (Ser, S)
n = 8 (11.94%)
Threonine (Thr, T)
n = 8 (11.94%)
Cysteine (Cys, C)
n = 0 (0%)
Valine (Val, V)
n = 2 (2.99%)
Leucine (Leu, L)
n = 9 (13.43%)
Isoleucine (Ile, I)
n = 6 (8.96%)
Methionine (Met, M)
n = 2 (2.99%)
Proline (Pro, P)
n = 7 (10.45%)
Phenylalanine (Phe, F)
n = 3 (4.48%)
Tyrosine (Tyr, Y)
n = 2 (2.99%)
Tryptophan (Trp, W)
n = 3 (4.48%)
Aspartic acid (Asp, D)
n = 1 (1.49%)
Glutamic acid (Glu, E)
n = 2 (2.99%)
Asparagine (Asn, N)
n = 1 (1.49%)
Glutamine (Gln, Q)
n = 5 (7.46%)
Histidine (His, H)
n = 1 (1.49%)
Lysine (Lys, K)
n = 7 (10.45%)
Arginine (Arg, R)
n = 0 (0%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 3 | 3 | 1 | 1 | 0 | 4 | 0 | 4 | 5 | 0 | 0 | 0 | 1 | 1 | 1 | 2 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 2 | 2 | 2 | 1 | 2 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 0 | 4 | 2 | 0 | 1 | 6 | 1 | 0 | 0 | 1 | 1 | 0 | 0 | 0 | 1 | 0 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 1 | 1 | 1 | 0 | 1 | 6 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 3 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 5 | 18 | 24 | 21 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 3 | 23 | 20 | 22 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 8 | 12 | 38 | 10 | ||||||||||||
| COX1 (size: 1545 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 46 (8.95%)
Alanine (Ala, A)
n = 42 (8.17%)
Serine (Ser, S)
n = 32 (6.23%)
Threonine (Thr, T)
n = 35 (6.81%)
Cysteine (Cys, C)
n = 1 (0.19%)
Valine (Val, V)
n = 38 (7.39%)
Leucine (Leu, L)
n = 57 (11.09%)
Isoleucine (Ile, I)
n = 36 (7.0%)
Methionine (Met, M)
n = 35 (6.81%)
Proline (Pro, P)
n = 28 (5.45%)
Phenylalanine (Phe, F)
n = 43 (8.37%)
Tyrosine (Tyr, Y)
n = 19 (3.7%)
Tryptophan (Trp, W)
n = 17 (3.31%)
Aspartic acid (Asp, D)
n = 17 (3.31%)
Glutamic acid (Glu, E)
n = 10 (1.95%)
Asparagine (Asn, N)
n = 16 (3.11%)
Glutamine (Gln, Q)
n = 6 (1.17%)
Histidine (His, H)
n = 18 (3.5%)
Lysine (Lys, K)
n = 9 (1.75%)
Arginine (Arg, R)
n = 9 (1.75%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 21 | 15 | 27 | 11 | 7 | 22 | 4 | 10 | 4 | 2 | 8 | 6 | 15 | 9 | 14 | 29 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 8 | 1 | 0 | 11 | 13 | 15 | 3 | 8 | 14 | 19 | 5 | 9 | 4 | 14 | 1 | 8 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 7 | 20 | 0 | 11 | 7 | 9 | 2 | 1 | 2 | 15 | 4 | 3 | 3 | 7 | 9 | 6 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 12 | 9 | 1 | 8 | 9 | 9 | 0 | 3 | 0 | 4 | 2 | 0 | 0 | 1 | 0 | 14 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 153 | 105 | 134 | 123 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 76 | 134 | 96 | 209 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 43 | 138 | 192 | 142 | ||||||||||||
| COX2 (size: 684 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 9 (3.96%)
Alanine (Ala, A)
n = 7 (3.08%)
Serine (Ser, S)
n = 21 (9.25%)
Threonine (Thr, T)
n = 18 (7.93%)
Cysteine (Cys, C)
n = 2 (0.88%)
Valine (Val, V)
n = 11 (4.85%)
Leucine (Leu, L)
n = 34 (14.98%)
Isoleucine (Ile, I)
n = 19 (8.37%)
Methionine (Met, M)
n = 15 (6.61%)
Proline (Pro, P)
n = 13 (5.73%)
Phenylalanine (Phe, F)
n = 7 (3.08%)
Tyrosine (Tyr, Y)
n = 10 (4.41%)
Tryptophan (Trp, W)
n = 5 (2.2%)
Aspartic acid (Asp, D)
n = 10 (4.41%)
Glutamic acid (Glu, E)
n = 15 (6.61%)
Asparagine (Asn, N)
n = 4 (1.76%)
Glutamine (Gln, Q)
n = 7 (3.08%)
Histidine (His, H)
n = 8 (3.52%)
Lysine (Lys, K)
n = 6 (2.64%)
Arginine (Arg, R)
n = 6 (2.64%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 11 | 8 | 10 | 4 | 1 | 18 | 0 | 11 | 6 | 1 | 2 | 1 | 8 | 0 | 3 | 4 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 5 | 2 | 0 | 2 | 3 | 2 | 0 | 0 | 4 | 5 | 0 | 4 | 5 | 3 | 1 | 4 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 4 | 9 | 1 | 3 | 2 | 9 | 1 | 2 | 4 | 5 | 5 | 0 | 0 | 2 | 2 | 4 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 4 | 13 | 2 | 7 | 3 | 5 | 1 | 0 | 0 | 6 | 0 | 0 | 0 | 1 | 0 | 5 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 52 | 57 | 68 | 51 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 28 | 53 | 61 | 86 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 12 | 50 | 111 | 55 | ||||||||||||
| COX3 (size: 784 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 20 (7.69%)
Alanine (Ala, A)
n = 14 (5.38%)
Serine (Ser, S)
n = 20 (7.69%)
Threonine (Thr, T)
n = 25 (9.62%)
Cysteine (Cys, C)
n = 2 (0.77%)
Valine (Val, V)
n = 16 (6.15%)
Leucine (Leu, L)
n = 32 (12.31%)
Isoleucine (Ile, I)
n = 16 (6.15%)
Methionine (Met, M)
n = 10 (3.85%)
Proline (Pro, P)
n = 11 (4.23%)
Phenylalanine (Phe, F)
n = 23 (8.85%)
Tyrosine (Tyr, Y)
n = 11 (4.23%)
Tryptophan (Trp, W)
n = 12 (4.62%)
Aspartic acid (Asp, D)
n = 3 (1.15%)
Glutamic acid (Glu, E)
n = 8 (3.08%)
Asparagine (Asn, N)
n = 7 (2.69%)
Glutamine (Gln, Q)
n = 7 (2.69%)
Histidine (His, H)
n = 16 (6.15%)
Lysine (Lys, K)
n = 3 (1.15%)
Arginine (Arg, R)
n = 5 (1.92%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 10 | 6 | 7 | 4 | 5 | 9 | 4 | 8 | 7 | 0 | 4 | 2 | 8 | 2 | 11 | 12 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 3 | 1 | 1 | 5 | 8 | 1 | 0 | 4 | 4 | 11 | 1 | 3 | 3 | 4 | 1 | 4 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 10 | 10 | 1 | 3 | 4 | 9 | 0 | 0 | 4 | 3 | 8 | 2 | 2 | 3 | 4 | 6 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 10 | 6 | 2 | 1 | 2 | 3 | 0 | 0 | 1 | 3 | 1 | 0 | 0 | 0 | 0 | 10 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 61 | 61 | 65 | 74 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 43 | 66 | 55 | 97 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 19 | 84 | 96 | 62 | ||||||||||||
| CYTB (size: 1140 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 26 (6.86%)
Alanine (Ala, A)
n = 23 (6.07%)
Serine (Ser, S)
n = 27 (7.12%)
Threonine (Thr, T)
n = 24 (6.33%)
Cysteine (Cys, C)
n = 4 (1.06%)
Valine (Val, V)
n = 17 (4.49%)
Leucine (Leu, L)
n = 56 (14.78%)
Isoleucine (Ile, I)
n = 39 (10.29%)
Methionine (Met, M)
n = 19 (5.01%)
Proline (Pro, P)
n = 22 (5.8%)
Phenylalanine (Phe, F)
n = 26 (6.86%)
Tyrosine (Tyr, Y)
n = 15 (3.96%)
Tryptophan (Trp, W)
n = 12 (3.17%)
Aspartic acid (Asp, D)
n = 11 (2.9%)
Glutamic acid (Glu, E)
n = 7 (1.85%)
Asparagine (Asn, N)
n = 17 (4.49%)
Glutamine (Gln, Q)
n = 7 (1.85%)
Histidine (His, H)
n = 11 (2.9%)
Lysine (Lys, K)
n = 8 (2.11%)
Arginine (Arg, R)
n = 8 (2.11%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 15 | 24 | 16 | 5 | 14 | 33 | 0 | 4 | 6 | 1 | 1 | 4 | 11 | 1 | 9 | 17 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 3 | 0 | 4 | 3 | 10 | 10 | 0 | 3 | 7 | 16 | 0 | 0 | 7 | 15 | 0 | 5 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 7 | 12 | 0 | 6 | 3 | 17 | 0 | 0 | 1 | 6 | 9 | 0 | 0 | 3 | 14 | 2 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 9 | 7 | 0 | 1 | 10 | 7 | 1 | 0 | 2 | 6 | 0 | 1 | 0 | 0 | 0 | 12 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 84 | 100 | 109 | 87 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 52 | 95 | 76 | 157 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 6 | 142 | 173 | 59 | ||||||||||||
| ND1 (size: 957 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 12 (3.77%)
Alanine (Ala, A)
n = 28 (8.81%)
Serine (Ser, S)
n = 22 (6.92%)
Threonine (Thr, T)
n = 23 (7.23%)
Cysteine (Cys, C)
n = 1 (0.31%)
Valine (Val, V)
n = 14 (4.4%)
Leucine (Leu, L)
n = 56 (17.61%)
Isoleucine (Ile, I)
n = 27 (8.49%)
Methionine (Met, M)
n = 22 (6.92%)
Proline (Pro, P)
n = 22 (6.92%)
Phenylalanine (Phe, F)
n = 19 (5.97%)
Tyrosine (Tyr, Y)
n = 11 (3.46%)
Tryptophan (Trp, W)
n = 9 (2.83%)
Aspartic acid (Asp, D)
n = 3 (0.94%)
Glutamic acid (Glu, E)
n = 11 (3.46%)
Asparagine (Asn, N)
n = 13 (4.09%)
Glutamine (Gln, Q)
n = 5 (1.57%)
Histidine (His, H)
n = 5 (1.57%)
Lysine (Lys, K)
n = 7 (2.2%)
Arginine (Arg, R)
n = 8 (2.52%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 10 | 17 | 19 | 3 | 10 | 32 | 4 | 7 | 5 | 0 | 1 | 3 | 10 | 0 | 10 | 9 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 3 | 0 | 1 | 6 | 15 | 6 | 1 | 2 | 2 | 7 | 1 | 3 | 7 | 12 | 0 | 3 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 7 | 13 | 0 | 0 | 8 | 10 | 0 | 0 | 4 | 4 | 7 | 1 | 0 | 5 | 8 | 2 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 3 | 11 | 0 | 2 | 1 | 7 | 0 | 1 | 1 | 5 | 1 | 0 | 0 | 1 | 0 | 8 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 68 | 89 | 96 | 66 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 34 | 91 | 56 | 138 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 11 | 103 | 153 | 52 | ||||||||||||
| ND2 (size: 1044 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 15 (4.32%)
Alanine (Ala, A)
n = 22 (6.34%)
Serine (Ser, S)
n = 29 (8.36%)
Threonine (Thr, T)
n = 39 (11.24%)
Cysteine (Cys, C)
n = 0 (0%)
Valine (Val, V)
n = 8 (2.31%)
Leucine (Leu, L)
n = 58 (16.71%)
Isoleucine (Ile, I)
n = 40 (11.53%)
Methionine (Met, M)
n = 33 (9.51%)
Proline (Pro, P)
n = 21 (6.05%)
Phenylalanine (Phe, F)
n = 12 (3.46%)
Tyrosine (Tyr, Y)
n = 9 (2.59%)
Tryptophan (Trp, W)
n = 10 (2.88%)
Aspartic acid (Asp, D)
n = 2 (0.58%)
Glutamic acid (Glu, E)
n = 5 (1.44%)
Asparagine (Asn, N)
n = 13 (3.75%)
Glutamine (Gln, Q)
n = 8 (2.31%)
Histidine (His, H)
n = 5 (1.44%)
Lysine (Lys, K)
n = 15 (4.32%)
Arginine (Arg, R)
n = 3 (0.86%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 18 | 22 | 30 | 5 | 10 | 33 | 4 | 6 | 8 | 0 | 2 | 2 | 3 | 1 | 6 | 6 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 3 | 0 | 0 | 1 | 9 | 11 | 1 | 1 | 2 | 12 | 0 | 2 | 8 | 11 | 0 | 1 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 17 | 21 | 0 | 2 | 9 | 15 | 0 | 0 | 3 | 1 | 8 | 0 | 0 | 3 | 10 | 0 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 5 | 5 | 0 | 0 | 2 | 15 | 0 | 0 | 0 | 3 | 0 | 0 | 0 | 0 | 1 | 10 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 52 | 89 | 143 | 64 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 31 | 108 | 58 | 151 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 10 | 113 | 183 | 42 | ||||||||||||
| ND3 (size: 1044 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 15 (4.32%)
Alanine (Ala, A)
n = 22 (6.34%)
Serine (Ser, S)
n = 29 (8.36%)
Threonine (Thr, T)
n = 39 (11.24%)
Cysteine (Cys, C)
n = 0 (0%)
Valine (Val, V)
n = 8 (2.31%)
Leucine (Leu, L)
n = 58 (16.71%)
Isoleucine (Ile, I)
n = 40 (11.53%)
Methionine (Met, M)
n = 33 (9.51%)
Proline (Pro, P)
n = 21 (6.05%)
Phenylalanine (Phe, F)
n = 12 (3.46%)
Tyrosine (Tyr, Y)
n = 9 (2.59%)
Tryptophan (Trp, W)
n = 10 (2.88%)
Aspartic acid (Asp, D)
n = 2 (0.58%)
Glutamic acid (Glu, E)
n = 5 (1.44%)
Asparagine (Asn, N)
n = 13 (3.75%)
Glutamine (Gln, Q)
n = 8 (2.31%)
Histidine (His, H)
n = 5 (1.44%)
Lysine (Lys, K)
n = 15 (4.32%)
Arginine (Arg, R)
n = 3 (0.86%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 18 | 22 | 30 | 5 | 10 | 33 | 4 | 6 | 8 | 0 | 2 | 2 | 3 | 1 | 6 | 6 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 3 | 0 | 0 | 1 | 9 | 11 | 1 | 1 | 2 | 12 | 0 | 2 | 8 | 11 | 0 | 1 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 17 | 21 | 0 | 2 | 9 | 15 | 0 | 0 | 3 | 1 | 8 | 0 | 0 | 3 | 10 | 0 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 5 | 5 | 0 | 0 | 2 | 15 | 0 | 0 | 0 | 3 | 0 | 0 | 0 | 0 | 1 | 10 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 52 | 89 | 143 | 64 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 31 | 108 | 58 | 151 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 10 | 113 | 183 | 42 | ||||||||||||
| ND4 (size: 1378 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 17 (3.71%)
Alanine (Ala, A)
n = 32 (6.99%)
Serine (Ser, S)
n = 41 (8.95%)
Threonine (Thr, T)
n = 41 (8.95%)
Cysteine (Cys, C)
n = 3 (0.66%)
Valine (Val, V)
n = 13 (2.84%)
Leucine (Leu, L)
n = 91 (19.87%)
Isoleucine (Ile, I)
n = 42 (9.17%)
Methionine (Met, M)
n = 32 (6.99%)
Proline (Pro, P)
n = 22 (4.8%)
Phenylalanine (Phe, F)
n = 17 (3.71%)
Tyrosine (Tyr, Y)
n = 18 (3.93%)
Tryptophan (Trp, W)
n = 13 (2.84%)
Aspartic acid (Asp, D)
n = 3 (0.66%)
Glutamic acid (Glu, E)
n = 8 (1.75%)
Asparagine (Asn, N)
n = 22 (4.8%)
Glutamine (Gln, Q)
n = 11 (2.4%)
Histidine (His, H)
n = 8 (1.75%)
Lysine (Lys, K)
n = 15 (3.28%)
Arginine (Arg, R)
n = 10 (2.18%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 24 | 18 | 27 | 9 | 12 | 47 | 6 | 15 | 9 | 2 | 1 | 3 | 8 | 1 | 7 | 10 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 5 | 1 | 2 | 6 | 11 | 15 | 0 | 3 | 3 | 8 | 3 | 4 | 8 | 10 | 0 | 4 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 12 | 24 | 1 | 6 | 8 | 13 | 3 | 2 | 9 | 9 | 9 | 1 | 2 | 9 | 13 | 2 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 6 | 7 | 1 | 1 | 2 | 14 | 1 | 0 | 2 | 6 | 2 | 0 | 0 | 0 | 0 | 12 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 73 | 125 | 163 | 98 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 54 | 125 | 85 | 195 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 28 | 128 | 215 | 88 | ||||||||||||
| ND4L (size: 297 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 4 (4.08%)
Alanine (Ala, A)
n = 6 (6.12%)
Serine (Ser, S)
n = 9 (9.18%)
Threonine (Thr, T)
n = 4 (4.08%)
Cysteine (Cys, C)
n = 3 (3.06%)
Valine (Val, V)
n = 6 (6.12%)
Leucine (Leu, L)
n = 22 (22.45%)
Isoleucine (Ile, I)
n = 10 (10.2%)
Methionine (Met, M)
n = 9 (9.18%)
Proline (Pro, P)
n = 1 (1.02%)
Phenylalanine (Phe, F)
n = 5 (5.1%)
Tyrosine (Tyr, Y)
n = 4 (4.08%)
Tryptophan (Trp, W)
n = 0 (0%)
Aspartic acid (Asp, D)
n = 1 (1.02%)
Glutamic acid (Glu, E)
n = 2 (2.04%)
Asparagine (Asn, N)
n = 7 (7.14%)
Glutamine (Gln, Q)
n = 2 (2.04%)
Histidine (His, H)
n = 2 (2.04%)
Lysine (Lys, K)
n = 0 (0%)
Arginine (Arg, R)
n = 1 (1.02%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 4 | 6 | 5 | 0 | 2 | 12 | 3 | 5 | 2 | 0 | 1 | 0 | 4 | 1 | 1 | 4 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 4 | 0 | 3 | 1 | 3 | 2 | 0 | 1 | 2 | 1 | 0 | 0 | 1 | 0 | 0 | 2 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 1 | 1 | 0 | 1 | 7 | 0 | 0 | 1 | 0 | 2 | 2 | 0 | 0 | 5 | 2 | 1 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 1 | 2 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 1 | 0 | 0 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 19 | 23 | 31 | 26 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 9 | 19 | 19 | 52 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 8 | 35 | 36 | 20 | ||||||||||||
| ND5 (size: 1821 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 29 (4.79%)
Alanine (Ala, A)
n = 39 (6.44%)
Serine (Ser, S)
n = 51 (8.42%)
Threonine (Thr, T)
n = 50 (8.25%)
Cysteine (Cys, C)
n = 4 (0.66%)
Valine (Val, V)
n = 24 (3.96%)
Leucine (Leu, L)
n = 84 (13.86%)
Isoleucine (Ile, I)
n = 55 (9.08%)
Methionine (Met, M)
n = 45 (7.43%)
Proline (Pro, P)
n = 23 (3.8%)
Phenylalanine (Phe, F)
n = 44 (7.26%)
Tyrosine (Tyr, Y)
n = 21 (3.47%)
Tryptophan (Trp, W)
n = 12 (1.98%)
Aspartic acid (Asp, D)
n = 11 (1.82%)
Glutamic acid (Glu, E)
n = 11 (1.82%)
Asparagine (Asn, N)
n = 38 (6.27%)
Glutamine (Gln, Q)
n = 19 (3.14%)
Histidine (His, H)
n = 12 (1.98%)
Lysine (Lys, K)
n = 24 (3.96%)
Arginine (Arg, R)
n = 9 (1.49%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 25 | 30 | 35 | 10 | 16 | 43 | 3 | 11 | 18 | 1 | 3 | 3 | 16 | 2 | 7 | 36 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 10 | 2 | 2 | 9 | 16 | 12 | 2 | 2 | 7 | 16 | 4 | 5 | 8 | 9 | 1 | 10 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 20 | 19 | 1 | 8 | 15 | 16 | 1 | 2 | 9 | 11 | 10 | 1 | 0 | 16 | 22 | 2 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 10 | 10 | 1 | 1 | 10 | 20 | 4 | 1 | 4 | 4 | 0 | 0 | 0 | 1 | 0 | 11 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 114 | 135 | 223 | 132 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 65 | 152 | 137 | 250 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 31 | 218 | 241 | 114 | ||||||||||||
| ND6 (size: 528 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 24 (13.71%)
Alanine (Ala, A)
n = 12 (6.86%)
Serine (Ser, S)
n = 15 (8.57%)
Threonine (Thr, T)
n = 10 (5.71%)
Cysteine (Cys, C)
n = 2 (1.14%)
Valine (Val, V)
n = 20 (11.43%)
Leucine (Leu, L)
n = 19 (10.86%)
Isoleucine (Ile, I)
n = 14 (8.0%)
Methionine (Met, M)
n = 9 (5.14%)
Proline (Pro, P)
n = 4 (2.29%)
Phenylalanine (Phe, F)
n = 13 (7.43%)
Tyrosine (Tyr, Y)
n = 9 (5.14%)
Tryptophan (Trp, W)
n = 4 (2.29%)
Aspartic acid (Asp, D)
n = 5 (2.86%)
Glutamic acid (Glu, E)
n = 9 (5.14%)
Asparagine (Asn, N)
n = 3 (1.71%)
Glutamine (Gln, Q)
n = 0 (0%)
Histidine (His, H)
n = 0 (0%)
Lysine (Lys, K)
n = 2 (1.14%)
Arginine (Arg, R)
n = 1 (0.57%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 14 | 0 | 4 | 3 | 0 | 1 | 0 | 10 | 0 | 0 | 10 | 0 | 3 | 7 | 11 | 2 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 5 | 2 | 0 | 9 | 0 | 1 | 2 | 15 | 0 | 3 | 6 | 3 | 1 | 0 | 0 | 7 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 1 | 0 | 2 | 6 | 0 | 1 | 1 | 6 | 1 | 8 | 1 | 3 | 5 | 3 | 0 | 0 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 0 | 0 | 9 | 4 | 1 | 0 | 2 | 1 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 1 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 70 | 9 | 45 | 52 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 38 | 34 | 29 | 75 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 42 | 7 | 25 | 102 | ||||||||||||
| Total protein-coding genes (size: 11409 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 216 (5.68%)
Alanine (Ala, A)
n = 254 (6.68%)
Serine (Ser, S)
n = 297 (7.81%)
Threonine (Thr, T)
n = 305 (8.02%)
Cysteine (Cys, C)
n = 23 (0.61%)
Valine (Val, V)
n = 181 (4.76%)
Leucine (Leu, L)
n = 587 (15.44%)
Isoleucine (Ile, I)
n = 336 (8.84%)
Methionine (Met, M)
n = 253 (6.66%)
Proline (Pro, P)
n = 194 (5.1%)
Phenylalanine (Phe, F)
n = 232 (6.1%)
Tyrosine (Tyr, Y)
n = 134 (3.53%)
Tryptophan (Trp, W)
n = 104 (2.74%)
Aspartic acid (Asp, D)
n = 70 (1.84%)
Glutamic acid (Glu, E)
n = 97 (2.55%)
Asparagine (Asn, N)
n = 157 (4.13%)
Glutamine (Gln, Q)
n = 89 (2.34%)
Histidine (His, H)
n = 94 (2.47%)
Lysine (Lys, K)
n = 103 (2.71%)
Arginine (Arg, R)
n = 65 (1.71%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 176 | 160 | 197 | 68 | 81 | 287 | 34 | 102 | 81 | 8 | 35 | 26 | 95 | 25 | 90 | 141 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 56 | 9 | 14 | 59 | 102 | 83 | 10 | 40 | 48 | 107 | 21 | 41 | 59 | 88 | 6 | 56 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 91 | 148 | 10 | 50 | 68 | 113 | 9 | 15 | 42 | 68 | 66 | 11 | 14 | 62 | 95 | 27 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 67 | 78 | 19 | 25 | 45 | 91 | 12 | 6 | 12 | 41 | 6 | 1 | 0 | 8 | 1 | 93 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 818 | 912 | 1212 | 857 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 466 | 993 | 753 | 1587 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 242 | 1117 | 1613 | 827 | ||||||||||||
>NC_006835.1 Herpestes javanicus mitochondrion, complete genome GTTAATGTAGCTTAAATACCTAAAGCAAGGCACTGAAAATGCCTAGATGAATCACCAGATTCCATAAACA CAAGGGTTTGGTCCTGGCCCTTCCATTAGTTACTAATAGGATTACACATGCAAGCCTCCGCATCCCGGTG AAAATGCCCTCTAAGTCATAACTGACCTAAAGGAGCAGGTATCAAGCACACAAAATGTAGCTCATAACGC CTTGCTCAGCCACACCCCCACGGGCTACAGCAGTGACAAAAATTAAGCCATGAATGAAAGTTCGACTAAG CCATATTAAATTAGGGTTGGTAAATTTCGTGCCAGCCACCGCGGCCATACGATTAACCCAGACTAATAGA CACACGGCGTAAAGCGTGTTCCAGAAACAACCTACCACTAAAGTTAAACCTTAACTAAGCCGTAAAAAGC CACAGTTAACATGAAAATACAACACGAAAGTAACTTTAATACCCCCACTACACGACAGCTAAGACCCAAA CTGGGATTAGATACCCCACTATGCTTAGCCCTAAATCTAGATAGTTAACTTAACAAACCTATCCGCCAGA GAACTACTAGCAACAGCTTAAAACTCAAAGGACTTGGCGGTGCTTCACATCCCTCTAGAGGAGCCTGTTC TATAATCGATAAACCCCGATAAACCTCACCACCTCTTGCTAATACAGTCTATATACCGCCATCTTCAGCA AACCCTCAAAAGGAATAACAGTAAGCAAAAGTATCTTAACATAAAAAAGTTAGGTCAAGGTGTAACCCAT GAGGTGGAAAGCAATGGGCTACATTTTCTACACAAGAACATCTCACGAAAGTTTTTATGAAACCAAAAAC TAAAGGAGGATTTAGCAGTAAGCTGAGAATAGAGCGCTCAGCTGAATCGGGCCATGAAGCACGCACACAC CGCCCGTCACCCTCCTCAAGTACACAAACCCAAACATAACCTATTAAAATTACACTTAATACAAGAGGAG ATAAGTCGTAACAAGGTAAGCATACTGGAAAGTGTGCTTGGATTAAACAAGATGTAGCTTAAATAAAGCA TCTGGCCTACACCCAGAAGATTTCATATCAAACTGACCATCTTGAGCCAAACCTAGCCCAAACAACAACA AATTCAACTAGCATGATAACATAAATCAAAACATTTACCCAACATATAAAAGTATAGGAGATAGAAATTT AACTTGGCGCTATAGAGACAGTACCGCAAGGGAAAGATGAAAGAAAAAACCCAAAGCACTACACAGCAAA GATTACCCCTTGTACCTTTTGCATAATGGATTAGCTAGACATAGTCTAACAAAGAGAACTTAAGCTAGAC CCCCCGAAACCAGACGAGCTACCTACGAACAATCTATTCAGGATGAACTCGTCTATGTAGCAAAATAGTG AGAAGATTTGTAGGTAGAGGTGAAAAACCTAACGAGCCTGGTGATAGCTGGTTGCCCAGAAAAAGAATTT TAGTTCAACGTTAAGCTTACCTAAAAAACCCAGAATTCAAATGTAAGCTTAAAATATAATCTAAAAAGGT ACAGCTTTTTAGAATTAGGATACAGCCTTAATTAGAGAGTAAGCATCAACACCAACCATAGTTGGCTTAA AAGCAGCCATCAATTGAGAAAGCGTTCAAGCTCAACAACAGAACATACCCTTAATGTCAAAAATATGCAA CCAACTCCCAACCTAATACTGGGCCAATCTATTTTACAATAGAAGCAATAATGCTAATATGAGTAACAAG AAATAATTCTCCCCGCATAAGCCTATATCAGAACGGATAACCACTGATAGTTAACAATAAGATAAAAACA GCCCAAACATAAATTAAATATCAATTCAACTGTTAATCCAACACAGGCATGCAACTAAGGAAAGATTAAA AGAAGTAAAAGGAACTCGGCAAACACAAACCCCGCCTGTTTACCAAAAACATCACCTCTAGCATTTCTAG TATTAGAGGCACTGCCTGCCCAGTGACACTAGTTAAACGGCCGCGGTATCCTGACCGTGCAAAGGTAGCA TAATCATTTGTTCCTTAAATAGGGACTTGTATGAATGGCCACACGAGGGTTTAACTGTCTCTTACTTCCG ATCCGTGAAATTGACCTTCCCGTGAAGAGGCGGGAATAAAACAATAAGACGAGAAGACCCTATGGAGYTT CAATTAACTGACCCAAGAAAACAAAAACCTAACCGACAGGGATAACAAACCTCCACATGGGTCAACAATT TGGGTTGGGGTGACCTCGGAGAATAAAATAACCTCCGAGTGATTTTAAATCTAGACCTACTAGTCAAAAG TATTACATCACTTATTGATCCAAAATATTTGATCAACGGAACAAGTTACCCTAGGGATAACAGCGCAATC CTATTCTAGAGTCCATATCGACAATAGGGTTTACGACCTCGATGTTGGATCAGGACATCCCGATGGTGCA GCAGCTATCAAAGGTTCGTTTGTTCAACGATTAAAGTCCTACGTGATCTGAGTTCAGACCGGAGTAATCC AGGTCGGTTTCTATCTATTAAACAATTTCTCCCAGTACGAAAGGACAAGAGAAATRAGGCCCCCTTTGCA AAAGCGCCTTCAATATAATAGATGATATAATCTCAATCTAAGCAACTCACCCATTATTCACTTAGCCCAA GAGCCCGGGCTTGTTAGGGTGGCAGAGCCCGGTAATTGCATAAAACTTAAACCTTTACCATCAGAGGTTC AATTCCTCTCCCTAACAACATGTTTATACTTAACATCCTATCACTAAGCATCCCAATCCTGCTCGCCGTA GCCTTCCTTACACTAGTCGAACGTAAAGTATTAGGTTACATACAACTCCGCAAAGGACCAAACATCGTAG GACCCTACGGCCTACTCCAACCCATCGCGGACGCCCTAAAACTCTTCACCAAAGAACCCCTCCGACCCCT AACATCCTCCGTATCCATATTCATCATAGCCCCTATCCTAGCCCTCACACTGGCCCTAATTATATGAATT CCCCTACCCATACCACACCCACTCATTAATATAAATCTAGGAATCCTATTTATACTAGCTATGTCCAGCC TCGCCGTATACTCAATCCTATGATCAGGATGAGCCTCCAACTCAAAATACGCCCTAATTGGAGCCCTACG AGCTGTAGCCCAAACTATCTCATACGAAGTTACACTAGCCATTATTCTTCTATCAGTACTACTAATAAAC GGCTCATTTACACTAGCCACCCTAATTACCACTCAAGAACATATATGACTAATTTTTCCAACATGACCAC TAGCTATAATATGATTTATCTCAACATTAGCAGAAACCAACCGGGCTCCATTCGATCTAACAGAAGGAGA ATCAGAATTAGTATCCGGATTTAACGTAGAATATGCAGCAGGTCCATTCGCCTTATTTTTTATAGCAGAA TATGCTAATATTATCATAATAAATAGCCTGACAACAGTCCTATTCTTTGGGGCATCCCATAATCCCTACA TGCCAGAACTCTATACTACAAACTTTATAGTCAAAACCCTAATCTTAACAATTATCTTCCTATGGATCCG AGCATCCTACCCACGATTCCGATATGATCAACTAATACACTTACTATGAAAAAACTTCCTACCACTCACC CTGGCCCTATGCATATGACACGTATCATTACCTATCATAACCGCTAGCATCCCACCTCTAACATAAGAAA TATGTCTGATAAAAGAGTTACTTTGATAGAGTAAATAATAGAGGTTTAAACCCTCTTATTTCTAGAATTA TAGGACTCGAACCTAATCCTAAGAACTCAAAAATCTTCGTGCTACCATATTACACCACATTCTACAGTAA GGTCAGCTAAATAAGCTATCGGGCCCATACCCCGAAAATGTTGGTTTATACCCTTCCCGTACTAATTAAA CCCTCAATCCTCCTCACCATTATAATAACCGTAATCTCAGGAACCATAATTGTACTAACCAGCTCTCACT GACTAATAGTCTGAATTGGCTTCGAAATAAACACACTAGCCATCATTCCCATTCTCATAAAAAAATCCAA CCCCCGAGCCATCGAAGCATCCACAAAATATTTTCTAACACAAGCAACCGCATCTATAATTCTCATAATG GGAATCGCCATTAACCTACTATACTCCGGACAATGAACCCTATCAAAAACCCTACACCCCGCAGCATCAG CCATAATAACCATTGCCCTAGCTATAAAACTAGGTCTAGCCCCATTCCACTTCTGAGTGCCAGAAGTCAC CCAAGGAATCCACATATCCTCAGGCCTGATCCTACTAACATGACAAAAAATTGCGCCCCTATCAATCCTT TACCAAATCTCACCAGCCATTAACCCAAACCTACTATTACCAATAGCCATTGCATCCGTTCTGATCGGAG GATGAGGAGGACTAAACCAAACACAACTACGAAAAATCCTAGCATACTCCTCAATCGCACACATAGGATG AATAGCAGCCATTACACTCTACAACCCCACAATAATGGTTCTAAACCTAACAATCTACATCATTATAACA TTAACCACCTTTATATTATTCATATACAGCTCCTCCACAACAACCCTATCACTATCACAAACATGAAATA AAACACCTTTAATCACCTCACTAATCCTTATACTAATACTCTCCCTAGGAGGACTTCCCCCATTATCAGG ATTTATCCCAAAATGAATAATCATTCTAGAACTCACCAAAAACGAAATAATTATCATACCAACCCTACTA GCAATCACAGCATTACTTAATCTGTTTTTCTACATACGACTCACATACACCACAACACTCACCATATTCC CTTCAACAAATAACATGATAATAAAATGAAAATTTGACAGCACAAAAAAAATAATTTTTCTACCCCCACT AACTGTAATCTCAACAATACTACTTCCAATTACACCACTCCTATCAATCCTGGACTAGGGGTTTAGGCTA GACTAGACCAAGGGCCTTCAAAGCCCTAAGCAAATCATACAGATTTAATCCCTGCAAAACAACCCTAAGG ACTGCGAGAATCTATCTCACATCAATTGAATGCAAACCAAACGCTTTAATTAAGCTAAGCCCTTACTAGA TTGGTGGGCTTCCATCCCACGAAACTTTAGTTAACAGCTAAAAACCCTAATCAACTGGCTTCAATCTACT TCTCCCGCCGTCTAGGGGAAAAAAGGCGGGAGAAGCCCCGGCAGCGTCGAAGCTGCTCCTTTGAATTTGC AATTCAATATGATATTTCACCACGAAGCTTGGCAAAAAGAGGGTTCAAACCTCTGTCTTTAGATTTACAG TCTAATGCTTGCTCAGCCATTTTACCTATGTTCATAGATCGTTGATTGTTCTCTACCAACCACAAAGATA TTGGCACCCTATATCTTCTATTTGGAGCCTGGGCTGGTATAGTGGGAACTGCTCTTAGTCTTTTAATTCG GGCCGAACTTGGCCAACCAGGTTCTCTGTTCGGAGATGACCAGATTTATAACGTAATCGTTACCGCCCAT GCATTCGTAATAATCTTCTTCATGGTTATACCAATCATAATCGGCGGGTTTGGAAACTGGCTAGTACCAC TAATAATTGGAGCACCTGACATGGCGTTCCCCCGAATAAATAACATGAGCTTCTGACTCCTCCCTCCATC CTTCCTACTTCTTCTAGCATCATCAATAGTGGAAGCGGGAGCAGGAACTGGATGAACCGTGTATCCACCC TTAGCCGGCAACTTAGCCCATGCAGGAGCATCCGTAGACCTGACTATTTTCTCTCTTCACCTTGCAGGTG TTTCCTCTATTCTAGGAGCCATTAATTTTATCACAACAATCATTAACATAAAACCACCAGCTATATCTCA ATATCAAACACCCCTATTCGTTTGATCCGTACTAATCACAGCTGTGTTACTTCTTCTATCCTTACCTGTA CTAGCAGCTGGCATTACAATACTCTTAACAGACCGAAATCTAAATACCACATTTTTCGACCCTGCTGGAG GAGGAGACCCAATTCTGTACCAGCACTTATTCTGATTCTTCGGTCATCCAGAAGTCTATATCCTGATTCT ACCAGGCTTTGGCATAATCTCTCATATTGTCACATATTATTCAGGTAAAAAAGAACCTTTCGGTTATATA GGAATGGTTTGAGCAATAATATCTATTGGCTTCCTAGGCTTCATTGTGTGAGCCCACCACATATTTACAG TAGGTATAGACGTTGATACACGAGCATATTTTACATCAGCTACAATAATTATTGCTATCCCTACTGGAGT GAAAGTATTCAGCTGACTCGCCACTCTTCACGGACGTAACATTAAATGATCGCCTGCCATACTATGAGCT CTAGGCTTCATCTTCCTATTTACAGTCGGCGGATTAACAGGCATCGTACTAGCCAATTCTTCACTAGATA TTGTCCTCCACGACACATATTATGTAGTAGCCCACTTCCACTATGTATTATCAATAGGGGCTGTATTCGC CATCATGGGAGGCTTCGTTCACTGGTTTCCACTATTCTCGGGGTATACTCTAGACGATACTTGAGCAAAA GCTCACTTCACAATTATATTTGTAGGTGTTAATATAACATTCTTCCCGCAACATTTTCTCGGACTATCCG GGATACCTCGGCGTTACTCTGATTATCCAGATGCCTATACAACCTGAAACGCAATCTCCTCAATAGGCTC TTTTATTTCATTGACAGCAGTGATATTGATAGTCTTCATGGTATGAGAAGCATTTGCGTCTAAACGAGAA GTGGCAATGATTGAAATAATCAATACCAACCTCGAATGATTACATGGGTGTCCTCCCCCATACCACACAT TTGAAGAGCCAACTTACGTGGTCTCAAAATAAGAAAGGAAGGAATCGAACCCCCTAAAATTGGTTTCAAG CCAACATCATAACCACTATGTCTTTCTCAATAAGGAGATACTAGTAAAAAATTACATAACTTTGTCAAAG TTAAATTATAGGTTTAAATCCTTTGTATCTCTATGGCATACCCGTTCCAATTAGGATTTCAAGATGCTTC ATCTCCTATTATAGAAGAATTACTACATTTCCATGATCACACACTAATGATTGTATTTCTAATTAGCTCA CTAGTACTATATATTATCTCACTAATATTAACAACTAAACTCACACATACAAGTACGATAGATGCCCAAG AGGTAGAAACCATCTGAACAATTTTACCCGCCATTATCCTAATCCTTATTGCACTACCTTCCCTACGAAT CCTTTACATAATAGATGAAATTAATAGCCCCTCTTTAACAGTAAAAACCATGGGACACCAATGATACTGA AGTTATGAATATACAGACTATGAAGACCTAAGCTTCGACTCTTACATAGTACCCACTCAAGAACTAAAGC CTGGAGAACTACGACTACTAGAAGTCGATAACCGAGTTGTTTTACCCATAGAAATAACCATTCGAATATT AATCTCATCAGAGGATGTATTACACTCATGAGCCGTACCATCATTAGGCCTAAAAACTGATGCTATCCCA GGACGACTAAATCAAACAACTCTTATGGGCACCCGACCTGGATTATACTATGGCCAGTGTTCAGAAATCT GTGGCTCGAACCACAGCTTTATGCCCATTGTACTTGAATTAATTCCACTAAAACATTTCGAAAAATGATC AACATCCATACTATAACCTCATTAAGAAGCTAAACAAGCGTTAACCTTTTAAGTTAAAGACTGGGAATTT AACCTCCCCTTAGTGATATGCCACAACTAGACACATCAACTTGATTCATTACGATCGTGTCAATAATCAC AACATTATTCATTGTATTTCAACTAAAATTATCAAAGCACTTATACCCGTCAAACCCAGAGTTAAAATCC ACAATTTCACTAAAACAACCCACTCCTTGAGAAAAAAAATGAACGAAAATCTATTCGCCTCTTTCACTAC CCCAACAATAATAGGACTTCCCGTCGTAATCCTTATTATTATATTCCCAAGCATCATATTCCCTGCACCA AATCGATTAATTAACAATCGCCTAATCTCACTCCAACAATGACTAATCCAACTTACATCAAAACAAATAC TAGCTATTCACAACCACAAAGGACAGACATGAGCCCTCATACTAATATCCCTGATTCTATTTATCGGCTC AACTAATCTACTGGGCCTTCTTCCACACTCATTTACGCCCACAACACAACTATCAATAAACCTAGGAATG GCCATTCCCCTATGAGCCGGTACAGTAATTATGGGATTCCGACACAAGACAAAATCATCCCTAGCCCATT TTCTACCCCAAGGAACACCTTTACCACTAATTCCAATGCTTGTAGTTATTGAAACTATTAGCCTATTTAT TCAACCAATAGCCCTGGCTGTACGACTTACAGCCAACATCACTGCAGGCCACCTACTAATTCACCTAATC GGAGGGGCTACCCTAGTCTTAATAAATATCAGTACTTCTATTGCTTTCATTACCTTTATTATCCTTATTC TATTGACAATTCTTGAATTTGCCGTAGCCCTAATTCAAGCCTATGTATTTACATTGCTGGTAAGCCTATA CCTACATGACAACACATAATGACCCACCAAACCCATACATACCACATAGTAAACCCAAGCCCATGACCAC TCACAGGAGCTCTGTCCGCTCTTCTAATAACCTCAGGATTGGCCATATGGTTCCACTTCAACTCAACAGT ATTATTAATTTTAGGTATAATTACCAATACCCTGACTATATATCAATGATGACGGGACATTATTCGAGAA AGCACATTCCAAGGTCACCACACGCCTACCGTTCAAAAAGGGCTGCGATACGGAATAGTCCTATTTATTA TCTCAGAGGTTTTCTTCTTCGCAGGCTTCTTCTGAGCCTTTTACCATTCAAGCCTTGCCCCTACCCCAGA ATTAGGAGGCTGCTGGCCTCCCACAGGCATTATCCCCCTTAACCCCTTAGAAGTTCCGTTACTCAATACA TCCGTACTATTAGCCTCAGGAGTGTCTATCACCTGAGCTCACCATAGCCTAATAGAGGGTAACCGAAAAC ACATGCTCCAAGCCCTATTGATTACTATCTCACTAGGCGTGTACTTTACTTTACTTCAAGCCTCAGAATA CTATGAAACAACATTCACCATCTCAGATGGAGTCTACGGTTCCACCTTTTTTATGGCTACAGGATTTCAT GGACTACACGTAATCATTGGATCTACTTTCCTCATTGTTTGTTTTCTCCGCCAACTAAAATTTCACTTTA CATCTAATCATCATTTTGGATTTGAAGCCGCTGCCTGATACTGACACTTCGTAGACGTAGTATGACTATT CCTGTACGTATCCATTTATTGATGAGGATCATATTTCTTTAGTATTAACTAGTACAATTGACTTCCAATC AATTAGTTTCGGTGTAACCCGAAAAGAAATAATAAACATAATATTAGCCCTATCTGTTAATACGATACTA TCCGCACTACTTGTACTAATTGCATTCTGACTGCCTCAACTAAACCCGTATGCAGAAAAAGCGAGCCCAT ATGAATGCGGATTTGACCCTATAGGATCTGCCCGCTTACCTTTCTCCATAAAATTTTTCTTAATCGCTAT TACATTCCTACTATTTGACCTAGAAATTGCACTTCTCCTCCCCCTGCCTTGAGCCTCACAAACAAACAAC TTATCAACCATGCTTACAATGGCATTACTATTAATCTTACTTCTAGCTGCAAGCCTAGCCTACGAGTGAA CTCAAAAGGGATTAGAGTGAACCGAATATGATAATTAGTTTAAACCAAAATAAATGATTTCGACTCATTA GACTGTAGCTAATACTACAATTATCAAATGTCCATTGTATATATTAACATCTTCCTAGCCTTCATTATAT CTCTCCTGGGTATATTAATCTACCGATCCCACCTAATATCCTCCCTCTTATGCTTAGAAGGCATAATGCT ATCCCTATTCGTTATAATCACTCTAATTATCCTAAATAATCATTTCACACTAGCCAGTATGACCCCCATC ATCCTGCTAGTGTTTGCTGCCTGCGAAGCAGCACTAGGCCTGTCCCTATTAGTAATGGTATCCAACACTT ATGGAAATGACTACGTACAAAATCTAAATTTACTACAATGCTAAAAATTATTCTACCAACAATTATATTA ATTCCACTAACATGACTATCTAAACCCAACATGATCTGAATTAACTCCACAGCTTACAGCCTATTAATTA GCCTCATCAGCCTTACATATCTCAACCAACTTAACGACAATAGCCTAAACTTCTCACTCCTATTTTTCTC AGATTCCCTATCAGCCCCCTTATTAGCACTAACTACATGACTACTACCACTAATAATCACAGCCAGCCAG TCCCACTTATCAAAAGAAACCCTGACCCGAAAAAAACTATATATTACAATACTAATCACCCTTCAACTAT TCCTAATCATAACATTTACCTCTACAGAACTAATTATATTCTACATTCTATTTGAAGCCACATTAATTCC TACTTTAATTATTATCACCCGATGAGGTAACCAAACAGAGCGGTTGAATGCAGGACTTTATTTCCTATTC TATACTCTCGTAGGCTCACTACCACTTCTAATTGCATTGTTATACATCCAAAACACCTCGGGATCTCTAA ATTTCCTAATTATACAGTACTGAAATAAACCAATATCCACCACATGATCTAATATTTTTATATGATTAGC ATGTATAATAGCATTTATAGTAAAAATGCCTTTATATGGCTTACATCTCTGACTACCCAAAGCACACGTA GAAGCCCCAATCGCTGGATCGATAGTCCTAGCCGCAGTGCTCCTGAAACTAGGGGGTTACGGGATAATAC GCATCACAACACTACTTAACCCCCTAACAAACCAAATAGCATATCCCTTCCTAATACTATCACTATGAGG AATAATTATAACAAGCTCAATCTGCTTACGCCAAACCGACCTAAAATCTCTAATCGCATACTCATCCGTA AGTCATATAGCTCTAGTTATCGTAGCAGTCCTAATTCAAACACCATGGAGCTATATAGGAGCAACAGCTC TAATAATTGCCCACGGACTAACATCCTCAATACTATTTTGCCTCGCAAATTCAAACTATGAACGAGTACA CAGTCGAACAATAATTCTAGCACGAGGCCTACAAACCCTACTTCCCCTAATAGCTGCCTGATGACTACTG GCCAGCCTCGCAAATCTGGCCCTACCCCCATCAATTAACCTGGTCGGAGAACTATTCGTAATCATGGCCT CCTTTTCATGATCAAACACCACCATCATCCTCATGGGGACGAACATTATTATCACAGCCCTGTATTCCCT CTACATACTAATTACAACCCAACGAGGAAAAAATACATACCACACTAAAAGCATCAAACCATCGTTCACA CGGGAAAATGCTTTAATAGCATTACACATACTTCCACTCGTACTCTTATCTCTTAAGCCCAAAATTATCC TAGGTCCTCCTTACTGTAAATATAGTTTAATATAAAACTTTAGGTTGTGAACCTAACAATAGAAGTTTGA ATCTTCTCATTTACCGAAAAAGTATGCAAGAACTGCTAATTCATGCTCCCGTGTCTAACAACATGGCTTT TTCAACTTTTATAGGATAGAAGTAATCCGTTGGTCTTAGGAACCAAAAAATTGGTGCAACTCCAAATGAA AGTAATAAATATATTTACCTCTCTAACATTAACAGCCATATTCATACTATTACTACCTATTATGATGATT AGCACTAAAGCATACAAAAACGACCTATATCCTAACTACGTAAAAACCACAGTCTCCTACGCCTTCATTA CCAGTATAATTCCAGCCATAATATYCATTAATTCTGGACAAGAAGCGATTATCTCCAACTGACATTGACT GACAATTCAAACCCTAAAACTCTCCATGAGCTTCAAACTAGACTACTTCTCAGTTATCTTCGTACCAGTA GCATTRTTCGTTACATGATCAATTATAGAATTCTCAATATGATATATACACGCAGACCCCTACATTAACC GATTCTTCAAATATCTTCTTATATTCCTCATTACCATAATCATCTTAGTAACCGCTAACAACCTATTYCA ACTATTTATCGGATGAGAAGGAGTAGGCATTATATCATTCCTACTTATCGGATGGTGATATGGCCGAACA GACGCTAATACCGCTGCCCTCCAAGCAATCCTCTATAATCGTATTGGAGACGTAGGATTTATTATATCAA TAGCATGATTCCTCTCCAATACAAACACATGAGACTTCCAACAAATCTTCGTCACACAATATGAAAATCT AAATATACCACTAATAGGCCTACTTCTAGCAGCCACTGGTAAATCCGCCCAATTTGGACTACACCCGTGA CTACCATCTGCCATAGAAGGACCCACACCTGTATCCGCCCTACTTCACTCAAGCACAATAGTGGTAGCAG GGGTATTTCTACTAATTCGCTTCCACCCCCTCATGGAACAAAATAAAATGATCCAGACCTCAACTCTATG CTTAGGGGCTATTACAACACTATTCACAGCTGTATGTGCTCTAACACAAAATGACATCAAAAAAATTGTA GCTTTCTCTACCTCAAGCCAACTCGGACTTATAATTGTAACAATCGGCATCAACCAACCCCACCTCGCAT TCCTGCACATCTGTACACACGCCTTCTTCAAGGCCATGTTATTCATGTGCTCCGGATCAATTATCCACAG CCTAAATGATGAACAAGACATCCGAAAAATAGGGGGCCTATATAAATCTATACCATTCACCACTACCTCC CTCATTGTTGGAAGCCTCGCACTTACAGGAATACCTTTTCTAACCGGATTCTACTCCAAAGACCTAATTA TTGAAACCGCCAACACGTCGTATACCAACGCCTGAGCCCTATTAATAACCCTTATCGCCACCTCTCTAAC CGCTGTCTACAGCACTCGAATTATATTCTTCGCACTCCTAGGACAACCTCGCTTTAACTCCATAGTGCTA ATCAACGAGAATAACCCCCTACTAGTAAACTCAATCAAACGCCTATTAATCGGTAGCATCTTCGCGGGAT ACTTAATCTCATATAATATCCCCCCAATAAACATCCCACAAATAACTATGCCCAATTACCTAAAACTAAT AGCCCTTACCGTAACAATCATAGGCTTCATCCTAGCCCTAGAACTTAACCTAGCAACTAAAAACCTAAAA TTCAATTATTCATCAAACTTCTTCAAGTTCTCCAACCTCCTGGGCTACTTCCCAACTATCATGCACCGCT CCTTACCACTAGCTAACCTCAACATAAGTCAAAAATCTGCATCAATATTACTAGACACCATCTGACTAGA AAATGTAATGCCCAAAACTATTTCCCATTTCCAAATAAAATCATCCTCTATCGTATCAAACCAAAAGGGA TTAATCAAGCTCTATTTCCTCTCCTTCATAATTACTATAACCCTCAGCATCCTACTAATTAATTTCCACG GGTAATCTCCATAATAACTAGTACACCAATAAGCAAAGACCACCCAGTAACAACAACTAATCAAGTCCCA TAACTATATAAAGCAGCAATCCCCATAGCCTCCTCACTAAAGAAACCTGAATCACCAGTATCATAAACCA CCCAGTCACCCGCACCATTAAAACCAAAAATAACCTCAGTATCCTCATCCTCTAAAATATAACAAGCTAT TAAAAGCTCTGCCAACACCCCCGTAATTAAAGCTCCTAACACAGCCTTATTAGAAGACCAAGTCTCAGGA TAGGGCTCAGCAGCCATAGCCGTAGTATAACCAAACACCACAAGCATACCCCCTAAATAAATTAAAAAAA CTATTAAACCCAAGAAAGAACCACCAAAACTCAAAACAATTCCACAACCCACACCACCCGCTACAATCAA GCTAAACCCACCATAAATAGGCGAAGGCTTAGAAGAAAAACTAACAAAACTAACCACAAAAATAGTACTT AAAATAAATACAATGTATATTATCATTATTCCCACATGGAATCTAACCATGACTTATGATATGAAAAACC ATCGTTGTATTTCAACTACAAGAATTTAATGACCAACATCCGCAAATCACACCCACTCATTAAAATCGTC AACGAATCATTCATTGATCTCCCCACCCCATCTAACATTTCAGCCTGATGAAACTTTGGCTCCCTTTTAG GAGTGTGCCTTATTCTACAGATCCTAACAGGCCTATTTCTAGCTATATACTACACATCAGACACATCAAC TGCCTTTTCATCAGTAACCCACATTTGCCGCGACGTCAACTACGGCTGAATCATTCGATATATACACGCT AACGGAGCCTCCATATTCTTTATCTGCCTATTCATACACGTAGGACGAGGCATATACTATGGCTCTTATA CATTCATAGAAACATGAAATATCGGAATTCTCCTATTACTCACAGTAATAGCAACTGCATTCATAGGTTA CGTACTACCATGAGGTCAAATATCATTCTGAGGAGCCACAGTTATCACTAATCTACTATCAGCAATCCCC TACATCGGAACTAACCTAGTAGAATGAATCTGAGGCGGATTCTCAGTAGACAAAGCCACCCTAACACGAT TCTTCGCATTCCACTTCATCCTACCATTCATTATCTCAGCCCTCGCAGCAGTACACCTCCTATTTCTACA TGAAACAGGATCTAACAACCCCTCAGGAATCTCATCAGACTCAGACAAAATTCCATTTCACCCCTACTAT ACAATCAAAGACATCCTAGGACTCCTAATTATACTCATAATACTCATAATACTAGTCCTATTCTCACCAG ACCTTCTAGGAGACCCAGACAACTACACCCCAGCCAACCCACTAAACACCCCACCACATATTAAACCCGA ATGATATTTTCTATTCGCATATGCAATCCTCCGATCCATCCCCAACAAACTAGGAGGAGTACTAGCCCTA GTACTATCTATTATAATCTTAGCTATCGCACCACTACTCCACACCTCAAACCAACGAGGCATGATATTCC GACCACTCAGCCAATGCTTATTTTGACTTCTAGTAGCAGACCTACTAACACTAACATGAATTGGAGGTCA ACCAGTAGAACACCCATTCATCGCCATCGGACAACTAGCCTCTATTCTATACTTTTCTATTATCCTTATC CTCATGCCCGTCTTCGGAACTATCGAAAATCAACTCCTAAAGTGAAGAGTCTTCGTAGTATATATAATAC CTTGGTCTTGTAAACCAAAAAAGGAGAATAGTCATCCTCCCTAAGACTTCAAGGAAGAAGCAAAAGCTCC ACCATCAGCACCCAAAGCTGAAATTCTTTTTAAACTATTCCCTGTAATACTACAACTCCACCCCACAACT CTCGCATTCATATATTACATAACATGCTACTGTGCTTGCCCAGTATGTCCCATCCCCGTAACCAATACAT AACACATACATTATATGTTATCCAATATATACTATGTATATCGTGCATTAAGTGCTTGTCCCCATGAATA TTAGGCATGTACATATATCTATAATATTACATAAGACATTATATATGTATATCGTGCATTAAGTGCTTGT CCCCATGAATATTAGGCATGTACATATATCTATAATATTACATAAGACATTATATATATATATCGTGCAT ACACATTATTCTATAGCTATTTCTCTATGGACCTCAACTGTCCGAAGAGCTTAATCACCTTGCCTCGAGA AACCATCAACCCTTGCTCGAACGTGAATCTCTTCTCGCTCCGGGCCCATTTCAACGTGGGGGTTACTATT CTAGAACTATACCTGGCATCTGGTTCTTACTTCAGGGCCATATAGGTCTTGATTCCAATCCTGCAATTAC TTCAAATAGGACATCTCGATGGACTAATGACTAATCAGCCCATGATCACACATAACTGTGGTGTCATGCA TTTGGTATCTTTTTATTTGGGGGGGTCGAGCTTGCTATGATTCAGCTATGACTTAAAAGTCTCGACTCAG TCAAATACTATGTAGCTGGGCTTATTCACTATGCGGGGGCTCACACCTCACCAAGCAGGTGTAATTCAGT CAATGGTCACAGGACATACTACCTAAATCCTAAGGCCTCAACCGGACGCACATAGGCGCACCCACGTATA CGCACGCATACACGTACGTACACTCACGTATACGCACGCATACACGTACGTACACTCACGTATACGCACG CATACACGTACGTACACTCACGTATACGCACGCATACACGTACGTACACTCACGTATACGCACGCATACA CGTACGTACACCCACGTATACGCACGCATACACGTACGTACACCCACGTATACGCACGCATACACGTACG TATACCCGCATACGCGCGCACGCGCATATACGCATGTATTAAATAGATAAATAACTAGCTTAACCAAACC CCCCTTACCCCCCGTTAACCCTATAGTATAAATATATACCTATTTATGTCCTGCCAAACCCCAAAAACAA GACTAAGCATATACCTAGATATAAGGCCTTAAATAAAATCTAAATACAAATTACCAAACCCATTAAACAT CAATTTTGAACACCAGCATACAACTTATGCTCGCGAATATCTATAGATATAATAACCCTGCTCTATCTCG TCCCTATTGAGCCATTTTTTTTACAACCTACCA
Contact: Vadim E. Fraifeld, MD, PhD
Head: Lab for the Biology of Aging, The Shraga Segal Department of Microbiology, Immunology and Genetics, Faculty of Health Sciences, Ben-Gurion University of the Negev
P.O. Box 653, Beer-Sheva 8410501, Israel
Email:
Head: Lab for the Biology of Aging, The Shraga Segal Department of Microbiology, Immunology and Genetics, Faculty of Health Sciences, Ben-Gurion University of the Negev
P.O. Box 653, Beer-Sheva 8410501, Israel
Email:
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If you would like to cite this database please use:
Toren D, Barzilay T, Tacutu R, Lehmann G, Muradian KK, Fraifeld VE. MitoAge: a database for comparative analysis of mitochondrial DNA, with a special focus on animal longevity. Nucleic Acids Res. 2016; 44(D1):D1262-5.
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