Viewing data for Hylobates pileatus


Scientific name Hylobates pileatus
Common name Pileated gibbon
Maximum lifespan 38.00 years (Hylobates pileatus@AnAge)

Total mtDNA (size: 16502 bases) GC AT G C A T
Base content (bases) 7457 9045 5233 2224 3970 5075
Base content per 1 kb (bases) 452 548 317 135 241 308
Base content (%) 45.2% 54.8%
Total protein-coding genes (size: 11336 bases) GC AT G C A T
Base content (bases) 5171 6165 3815 1356 2788 3377
Base content per 1 kb (bases) 456 544 337 120 246 298
Base content (%) 45.6% 54.4%
D-loop (size: 1049 bases) GC AT G C A T
Base content (bases) 501 548 346 155 254 294
Base content per 1 kb (bases) 478 522 330 148 242 280
Base content (%) 47.8% 52.2%
Total tRNA-coding genes (size: 1504 bases) GC AT G C A T
Base content (bases) 606 898 364 242 385 513
Base content per 1 kb (bases) 403 597 242 161 256 341
Base content (%) 40.3% 59.7%
Total rRNA-coding genes (size: 2510 bases) GC AT G C A T
Base content (bases) 1114 1396 658 456 533 863
Base content per 1 kb (bases) 444 556 262 182 212 344
Base content (%) 44.4% 55.6%
12S rRNA gene (size: 951 bases) GC AT G C A T
Base content (bases) 439 512 256 183 199 313
Base content per 1 kb (bases) 462 538 269 192 209 329
Base content (%) 46.2% 53.8%
16S rRNA gene (size: 1559 bases) GC AT G C A T
Base content (bases) 675 884 402 273 334 550
Base content per 1 kb (bases) 433 567 258 175 214 353
Base content (%) 43.3% 56.7%

ATP6 (size: 681 bases) GC AT G C A T
Base content (bases) 319 362 241 78 162 200
Base content per 1 kb (bases) 468 532 354 115 238 294
Base content (%) 46.8% 53.2%
ATP8 (size: 207 bases) GC AT G C A T
Base content (bases) 90 117 73 17 45 72
Base content per 1 kb (bases) 435 565 353 82 217 348
Base content (%) 43.5% 56.5%
COX1 (size: 1542 bases) GC AT G C A T
Base content (bases) 731 811 471 260 414 397
Base content per 1 kb (bases) 474 526 305 169 268 257
Base content (%) 47.4% 52.6%
COX2 (size: 684 bases) GC AT G C A T
Base content (bases) 316 368 216 100 166 202
Base content per 1 kb (bases) 462 538 316 146 243 295
Base content (%) 46.2% 53.8%
COX3 (size: 784 bases) GC AT G C A T
Base content (bases) 395 389 268 127 192 197
Base content per 1 kb (bases) 504 496 342 162 245 251
Base content (%) 50.4% 49.6%
CYTB (size: 1141 bases) GC AT G C A T
Base content (bases) 524 617 380 144 283 334
Base content per 1 kb (bases) 459 541 333 126 248 293
Base content (%) 45.9% 54.1%
ND1 (size: 956 bases) GC AT G C A T
Base content (bases) 430 526 330 100 234 292
Base content per 1 kb (bases) 450 550 345 105 245 305
Base content (%) 45.0% 55.0%
ND2 (size: 1043 bases) GC AT G C A T
Base content (bases) 451 592 349 102 261 331
Base content per 1 kb (bases) 432 568 335 98 250 317
Base content (%) 43.2% 56.8%
ND3 (size: 346 bases) GC AT G C A T
Base content (bases) 142 204 106 36 92 112
Base content per 1 kb (bases) 410 590 306 104 266 324
Base content (%) 41.0% 59.0%
ND4 (size: 1378 bases) GC AT G C A T
Base content (bases) 604 774 475 129 352 422
Base content per 1 kb (bases) 438 562 345 94 255 306
Base content (%) 43.8% 56.2%
ND4L (size: 297 bases) GC AT G C A T
Base content (bases) 134 163 97 37 81 82
Base content per 1 kb (bases) 451 549 327 125 273 276
Base content (%) 45.1% 54.9%
ND5 (size: 1806 bases) GC AT G C A T
Base content (bases) 823 983 632 191 427 556
Base content per 1 kb (bases) 456 544 350 106 236 308
Base content (%) 45.6% 54.4%
ND6 (size: 525 bases) GC AT G C A T
Base content (bases) 234 291 193 41 93 198
Base content per 1 kb (bases) 446 554 368 78 177 377
Base content (%) 44.6% 55.4%

ATP6 (size: 681 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 8 (3.54%)
Alanine (Ala, A)
n = 23 (10.18%)
Serine (Ser, S)
n = 11 (4.87%)
Threonine (Thr, T)
n = 30 (13.27%)
Cysteine (Cys, C)
n = 0 (0%)
Valine (Val, V)
n = 10 (4.42%)
Leucine (Leu, L)
n = 46 (20.35%)
Isoleucine (Ile, I)
n = 24 (10.62%)
Methionine (Met, M)
n = 8 (3.54%)
Proline (Pro, P)
n = 16 (7.08%)
Phenylalanine (Phe, F)
n = 8 (3.54%)
Tyrosine (Tyr, Y)
n = 3 (1.33%)
Tryptophan (Trp, W)
n = 3 (1.33%)
Aspartic acid (Asp, D)
n = 1 (0.44%)
Glutamic acid (Glu, E)
n = 3 (1.33%)
Asparagine (Asn, N)
n = 9 (3.98%)
Glutamine (Gln, Q)
n = 8 (3.54%)
Histidine (His, H)
n = 6 (2.65%)
Lysine (Lys, K)
n = 5 (2.21%)
Arginine (Arg, R)
n = 4 (1.77%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
15 9 7 5 9 22 6 3 8 0 1 2 6 1 3 5
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
1 0 0 4 12 6 1 0 6 1 1 1 11 4 0 4
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
13 11 2 0 5 2 0 1 3 2 1 1 1 2 7 2
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
4 3 0 0 1 5 0 0 1 3 0 0 0 1 0 2
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
45 76 80 26
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
19 76 36 96
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
14 89 84 40
ATP8 (size: 207 bases)
Amino acid sequence: MPQLNTTVWPTIIMSMLLALFLLMQLKTLNTHYHPPASPKLTNIKSRNNPWEHKWTKIYSLHSLPPQF*
Amino acid frequencies:
Glycine (Gly, G)
n = 0 (0%)
Alanine (Ala, A)
n = 2 (2.94%)
Serine (Ser, S)
n = 5 (7.35%)
Threonine (Thr, T)
n = 7 (10.29%)
Cysteine (Cys, C)
n = 0 (0%)
Valine (Val, V)
n = 1 (1.47%)
Leucine (Leu, L)
n = 11 (16.18%)
Isoleucine (Ile, I)
n = 4 (5.88%)
Methionine (Met, M)
n = 4 (5.88%)
Proline (Pro, P)
n = 8 (11.76%)
Phenylalanine (Phe, F)
n = 2 (2.94%)
Tyrosine (Tyr, Y)
n = 2 (2.94%)
Tryptophan (Trp, W)
n = 3 (4.41%)
Aspartic acid (Asp, D)
n = 0 (0%)
Glutamic acid (Glu, E)
n = 1 (1.47%)
Asparagine (Asn, N)
n = 5 (7.35%)
Glutamine (Gln, Q)
n = 3 (4.41%)
Histidine (His, H)
n = 4 (5.88%)
Lysine (Lys, K)
n = 5 (7.35%)
Arginine (Arg, R)
n = 1 (1.47%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
1 3 3 2 4 3 1 1 3 0 0 0 0 1 1 1
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
1 0 0 0 1 1 0 0 0 0 0 1 4 3 0 0
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
2 2 3 0 2 1 2 0 0 1 1 0 0 1 4 1
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
3 1 0 0 0 5 0 1 0 0 0 0 0 0 1 3
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
4 26 25 14
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
4 22 21 22
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
9 25 26 9
COX1 (size: 1542 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 46 (8.97%)
Alanine (Ala, A)
n = 40 (7.8%)
Serine (Ser, S)
n = 32 (6.24%)
Threonine (Thr, T)
n = 34 (6.63%)
Cysteine (Cys, C)
n = 1 (0.19%)
Valine (Val, V)
n = 37 (7.21%)
Leucine (Leu, L)
n = 61 (11.89%)
Isoleucine (Ile, I)
n = 38 (7.41%)
Methionine (Met, M)
n = 30 (5.85%)
Proline (Pro, P)
n = 30 (5.85%)
Phenylalanine (Phe, F)
n = 42 (8.19%)
Tyrosine (Tyr, Y)
n = 21 (4.09%)
Tryptophan (Trp, W)
n = 16 (3.12%)
Aspartic acid (Asp, D)
n = 16 (3.12%)
Glutamic acid (Glu, E)
n = 9 (1.75%)
Asparagine (Asn, N)
n = 16 (3.12%)
Glutamine (Gln, Q)
n = 7 (1.36%)
Histidine (His, H)
n = 19 (3.7%)
Lysine (Lys, K)
n = 10 (1.95%)
Arginine (Arg, R)
n = 8 (1.56%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
19 19 24 5 15 26 8 7 6 1 5 15 15 2 13 29
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
6 1 0 5 27 7 1 2 22 17 5 4 16 10 0 7
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
9 15 3 8 11 8 1 1 3 6 15 6 0 2 14 5
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
14 6 3 6 10 10 0 2 2 4 0 1 0 0 0 10
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
148 118 133 115
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
76 132 98 208
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
36 221 166 91
COX2 (size: 684 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 11 (4.85%)
Alanine (Ala, A)
n = 14 (6.17%)
Serine (Ser, S)
n = 11 (4.85%)
Threonine (Thr, T)
n = 21 (9.25%)
Cysteine (Cys, C)
n = 2 (0.88%)
Valine (Val, V)
n = 13 (5.73%)
Leucine (Leu, L)
n = 33 (14.54%)
Isoleucine (Ile, I)
n = 22 (9.69%)
Methionine (Met, M)
n = 9 (3.96%)
Proline (Pro, P)
n = 15 (6.61%)
Phenylalanine (Phe, F)
n = 11 (4.85%)
Tyrosine (Tyr, Y)
n = 9 (3.96%)
Tryptophan (Trp, W)
n = 4 (1.76%)
Aspartic acid (Asp, D)
n = 10 (4.41%)
Glutamic acid (Glu, E)
n = 12 (5.29%)
Asparagine (Asn, N)
n = 7 (3.08%)
Glutamine (Gln, Q)
n = 7 (3.08%)
Histidine (His, H)
n = 6 (2.64%)
Lysine (Lys, K)
n = 4 (1.76%)
Arginine (Arg, R)
n = 6 (2.64%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
6 16 7 4 8 16 2 3 7 0 1 8 3 1 3 8
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
2 1 1 3 8 3 0 0 5 4 2 4 3 6 2 4
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
5 10 2 1 5 3 0 0 2 4 5 0 0 2 5 2
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
4 9 3 3 7 4 0 1 3 2 0 0 0 0 1 4
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
60 64 65 39
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
25 59 56 88
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
15 93 81 39
COX3 (size: 784 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 19 (7.31%)
Alanine (Ala, A)
n = 17 (6.54%)
Serine (Ser, S)
n = 20 (7.69%)
Threonine (Thr, T)
n = 25 (9.62%)
Cysteine (Cys, C)
n = 1 (0.38%)
Valine (Val, V)
n = 14 (5.38%)
Leucine (Leu, L)
n = 35 (13.46%)
Isoleucine (Ile, I)
n = 16 (6.15%)
Methionine (Met, M)
n = 7 (2.69%)
Proline (Pro, P)
n = 12 (4.62%)
Phenylalanine (Phe, F)
n = 23 (8.85%)
Tyrosine (Tyr, Y)
n = 10 (3.85%)
Tryptophan (Trp, W)
n = 12 (4.62%)
Aspartic acid (Asp, D)
n = 3 (1.15%)
Glutamic acid (Glu, E)
n = 7 (2.69%)
Asparagine (Asn, N)
n = 6 (2.31%)
Glutamine (Gln, Q)
n = 9 (3.46%)
Histidine (His, H)
n = 17 (6.54%)
Lysine (Lys, K)
n = 3 (1.15%)
Arginine (Arg, R)
n = 5 (1.92%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
4 12 6 3 8 14 8 1 7 2 2 6 5 1 5 18
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
1 0 1 3 9 2 3 0 9 10 0 2 7 2 1 2
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
11 9 3 1 8 6 1 0 4 2 8 3 1 3 3 4
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
13 6 1 1 2 2 1 0 3 2 0 0 0 0 0 9
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
60 76 61 64
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
41 70 55 95
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
26 122 81 32
CYTB (size: 1141 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 24 (6.33%)
Alanine (Ala, A)
n = 23 (6.07%)
Serine (Ser, S)
n = 24 (6.33%)
Threonine (Thr, T)
n = 31 (8.18%)
Cysteine (Cys, C)
n = 2 (0.53%)
Valine (Val, V)
n = 18 (4.75%)
Leucine (Leu, L)
n = 66 (17.41%)
Isoleucine (Ile, I)
n = 34 (8.97%)
Methionine (Met, M)
n = 15 (3.96%)
Proline (Pro, P)
n = 23 (6.07%)
Phenylalanine (Phe, F)
n = 23 (6.07%)
Tyrosine (Tyr, Y)
n = 17 (4.49%)
Tryptophan (Trp, W)
n = 12 (3.17%)
Aspartic acid (Asp, D)
n = 10 (2.64%)
Glutamic acid (Glu, E)
n = 4 (1.06%)
Asparagine (Asn, N)
n = 17 (4.49%)
Glutamine (Gln, Q)
n = 10 (2.64%)
Histidine (His, H)
n = 11 (2.9%)
Lysine (Lys, K)
n = 9 (2.37%)
Arginine (Arg, R)
n = 7 (1.85%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
8 26 11 6 17 30 4 9 8 2 0 5 11 2 5 18
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
4 0 2 5 12 6 0 3 13 5 3 3 8 12 0 1
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
13 17 0 1 9 10 0 0 4 4 13 0 0 3 14 2
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
9 3 1 2 8 9 0 0 4 3 0 0 0 0 0 12
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
79 108 110 83
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
49 97 78 156
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
16 175 146 43
ND1 (size: 956 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 12 (3.79%)
Alanine (Ala, A)
n = 24 (7.57%)
Serine (Ser, S)
n = 19 (5.99%)
Threonine (Thr, T)
n = 41 (12.93%)
Cysteine (Cys, C)
n = 1 (0.32%)
Valine (Val, V)
n = 7 (2.21%)
Leucine (Leu, L)
n = 64 (20.19%)
Isoleucine (Ile, I)
n = 23 (7.26%)
Methionine (Met, M)
n = 16 (5.05%)
Proline (Pro, P)
n = 21 (6.62%)
Phenylalanine (Phe, F)
n = 16 (5.05%)
Tyrosine (Tyr, Y)
n = 14 (4.42%)
Tryptophan (Trp, W)
n = 9 (2.84%)
Aspartic acid (Asp, D)
n = 3 (0.95%)
Glutamic acid (Glu, E)
n = 11 (3.47%)
Asparagine (Asn, N)
n = 15 (4.73%)
Glutamine (Gln, Q)
n = 6 (1.89%)
Histidine (His, H)
n = 2 (0.63%)
Lysine (Lys, K)
n = 7 (2.21%)
Arginine (Arg, R)
n = 7 (2.21%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
9 14 11 5 16 35 0 6 5 1 0 3 4 0 3 13
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
5 0 1 5 12 7 0 1 7 4 0 4 9 8 0 3
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
25 13 0 5 4 7 1 0 2 4 10 1 2 2 13 0
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
2 10 1 0 3 6 1 1 1 5 0 0 0 0 0 8
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
57 92 104 65
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
31 103 58 126
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
12 135 129 42
ND2 (size: 1043 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 14 (4.05%)
Alanine (Ala, A)
n = 19 (5.49%)
Serine (Ser, S)
n = 26 (7.51%)
Threonine (Thr, T)
n = 44 (12.72%)
Cysteine (Cys, C)
n = 0 (0%)
Valine (Val, V)
n = 14 (4.05%)
Leucine (Leu, L)
n = 61 (17.63%)
Isoleucine (Ile, I)
n = 32 (9.25%)
Methionine (Met, M)
n = 20 (5.78%)
Proline (Pro, P)
n = 23 (6.65%)
Phenylalanine (Phe, F)
n = 17 (4.91%)
Tyrosine (Tyr, Y)
n = 10 (2.89%)
Tryptophan (Trp, W)
n = 11 (3.18%)
Aspartic acid (Asp, D)
n = 1 (0.29%)
Glutamic acid (Glu, E)
n = 6 (1.73%)
Asparagine (Asn, N)
n = 20 (5.78%)
Glutamine (Gln, Q)
n = 10 (2.89%)
Histidine (His, H)
n = 3 (0.87%)
Lysine (Lys, K)
n = 12 (3.47%)
Arginine (Arg, R)
n = 4 (1.16%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
13 19 17 7 15 30 3 6 8 2 3 3 6 2 7 10
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
3 0 0 4 8 6 1 1 7 5 1 2 10 11 0 4
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
26 13 1 2 12 9 0 0 3 4 6 1 0 2 18 0
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
3 5 1 0 1 11 1 0 4 0 0 0 0 0 0 10
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
54 95 131 67
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
32 109 62 144
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
16 145 137 49
ND3 (size: 1043 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 14 (4.05%)
Alanine (Ala, A)
n = 19 (5.49%)
Serine (Ser, S)
n = 26 (7.51%)
Threonine (Thr, T)
n = 44 (12.72%)
Cysteine (Cys, C)
n = 0 (0%)
Valine (Val, V)
n = 14 (4.05%)
Leucine (Leu, L)
n = 61 (17.63%)
Isoleucine (Ile, I)
n = 32 (9.25%)
Methionine (Met, M)
n = 20 (5.78%)
Proline (Pro, P)
n = 23 (6.65%)
Phenylalanine (Phe, F)
n = 17 (4.91%)
Tyrosine (Tyr, Y)
n = 10 (2.89%)
Tryptophan (Trp, W)
n = 11 (3.18%)
Aspartic acid (Asp, D)
n = 1 (0.29%)
Glutamic acid (Glu, E)
n = 6 (1.73%)
Asparagine (Asn, N)
n = 20 (5.78%)
Glutamine (Gln, Q)
n = 10 (2.89%)
Histidine (His, H)
n = 3 (0.87%)
Lysine (Lys, K)
n = 12 (3.47%)
Arginine (Arg, R)
n = 4 (1.16%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
13 19 17 7 15 30 3 6 8 2 3 3 6 2 7 10
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
3 0 0 4 8 6 1 1 7 5 1 2 10 11 0 4
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
26 13 1 2 12 9 0 0 3 4 6 1 0 2 18 0
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
3 5 1 0 1 11 1 0 4 0 0 0 0 0 0 10
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
54 95 131 67
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
32 109 62 144
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
16 145 137 49
ND4 (size: 1378 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 17 (3.71%)
Alanine (Ala, A)
n = 27 (5.9%)
Serine (Ser, S)
n = 37 (8.08%)
Threonine (Thr, T)
n = 47 (10.26%)
Cysteine (Cys, C)
n = 2 (0.44%)
Valine (Val, V)
n = 11 (2.4%)
Leucine (Leu, L)
n = 97 (21.18%)
Isoleucine (Ile, I)
n = 37 (8.08%)
Methionine (Met, M)
n = 34 (7.42%)
Proline (Pro, P)
n = 26 (5.68%)
Phenylalanine (Phe, F)
n = 18 (3.93%)
Tyrosine (Tyr, Y)
n = 13 (2.84%)
Tryptophan (Trp, W)
n = 12 (2.62%)
Aspartic acid (Asp, D)
n = 3 (0.66%)
Glutamic acid (Glu, E)
n = 8 (1.75%)
Asparagine (Asn, N)
n = 24 (5.24%)
Glutamine (Gln, Q)
n = 9 (1.97%)
Histidine (His, H)
n = 15 (3.28%)
Lysine (Lys, K)
n = 12 (2.62%)
Arginine (Arg, R)
n = 10 (2.18%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
16 21 33 15 29 42 3 5 9 0 1 2 8 0 7 11
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
1 1 1 2 14 10 1 2 8 6 1 5 16 5 0 7
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
23 15 2 7 16 6 0 0 8 1 12 1 3 4 20 2
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
13 7 1 2 1 12 0 0 2 7 1 0 0 0 0 11
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
66 149 162 82
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
49 129 84 197
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
14 197 176 72
ND4L (size: 297 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 4 (4.08%)
Alanine (Ala, A)
n = 8 (8.16%)
Serine (Ser, S)
n = 7 (7.14%)
Threonine (Thr, T)
n = 6 (6.12%)
Cysteine (Cys, C)
n = 3 (3.06%)
Valine (Val, V)
n = 5 (5.1%)
Leucine (Leu, L)
n = 24 (24.49%)
Isoleucine (Ile, I)
n = 9 (9.18%)
Methionine (Met, M)
n = 9 (9.18%)
Proline (Pro, P)
n = 2 (2.04%)
Phenylalanine (Phe, F)
n = 3 (3.06%)
Tyrosine (Tyr, Y)
n = 3 (3.06%)
Tryptophan (Trp, W)
n = 0 (0%)
Aspartic acid (Asp, D)
n = 1 (1.02%)
Glutamic acid (Glu, E)
n = 2 (2.04%)
Asparagine (Asn, N)
n = 6 (6.12%)
Glutamine (Gln, Q)
n = 1 (1.02%)
Histidine (His, H)
n = 4 (4.08%)
Lysine (Lys, K)
n = 0 (0%)
Arginine (Arg, R)
n = 1 (1.02%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
1 8 6 0 6 10 5 3 1 0 0 4 0 1 1 2
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
3 0 3 2 3 3 0 0 3 1 0 1 1 0 0 2
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
0 4 0 1 3 3 0 0 0 1 2 0 0 1 5 0
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
4 2 0 1 0 0 0 0 1 0 0 0 0 1 0 0
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
20 29 30 20
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
8 23 18 50
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
9 45 34 11
ND5 (size: 1806 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 25 (4.16%)
Alanine (Ala, A)
n = 42 (6.99%)
Serine (Ser, S)
n = 49 (8.15%)
Threonine (Thr, T)
n = 64 (10.65%)
Cysteine (Cys, C)
n = 6 (1.0%)
Valine (Val, V)
n = 12 (2.0%)
Leucine (Leu, L)
n = 104 (17.3%)
Isoleucine (Ile, I)
n = 57 (9.48%)
Methionine (Met, M)
n = 29 (4.83%)
Proline (Pro, P)
n = 30 (4.99%)
Phenylalanine (Phe, F)
n = 35 (5.82%)
Tyrosine (Tyr, Y)
n = 16 (2.66%)
Tryptophan (Trp, W)
n = 12 (2.0%)
Aspartic acid (Asp, D)
n = 9 (1.5%)
Glutamic acid (Glu, E)
n = 13 (2.16%)
Asparagine (Asn, N)
n = 35 (5.82%)
Glutamine (Gln, Q)
n = 20 (3.33%)
Histidine (His, H)
n = 14 (2.33%)
Lysine (Lys, K)
n = 21 (3.49%)
Arginine (Arg, R)
n = 8 (1.33%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
22 35 27 13 31 53 3 4 17 3 4 4 4 0 9 26
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
2 1 5 4 22 13 3 2 14 8 1 3 18 8 1 3
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
36 20 5 4 19 12 2 2 10 2 14 1 0 6 29 2
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
12 10 3 2 7 18 3 0 5 3 0 0 0 1 0 11
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
101 172 218 111
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
63 173 129 237
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
27 287 209 79
ND6 (size: 525 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 29 (16.67%)
Alanine (Ala, A)
n = 8 (4.6%)
Serine (Ser, S)
n = 9 (5.17%)
Threonine (Thr, T)
n = 5 (2.87%)
Cysteine (Cys, C)
n = 2 (1.15%)
Valine (Val, V)
n = 27 (15.52%)
Leucine (Leu, L)
n = 23 (13.22%)
Isoleucine (Ile, I)
n = 12 (6.9%)
Methionine (Met, M)
n = 11 (6.32%)
Proline (Pro, P)
n = 3 (1.72%)
Phenylalanine (Phe, F)
n = 6 (3.45%)
Tyrosine (Tyr, Y)
n = 11 (6.32%)
Tryptophan (Trp, W)
n = 5 (2.87%)
Aspartic acid (Asp, D)
n = 4 (2.3%)
Glutamic acid (Glu, E)
n = 10 (5.75%)
Asparagine (Asn, N)
n = 4 (2.3%)
Glutamine (Gln, Q)
n = 0 (0%)
Histidine (His, H)
n = 0 (0%)
Lysine (Lys, K)
n = 2 (1.15%)
Arginine (Arg, R)
n = 3 (1.72%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
12 0 2 1 0 0 4 3 0 0 12 1 5 9 6 0
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
9 2 0 3 1 1 3 9 1 6 13 2 1 0 0 3
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
0 1 1 3 0 2 1 3 0 10 1 5 15 3 1 0
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
0 4 6 2 2 0 2 0 0 0 3 0 1 0 0 0
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
78 11 38 48
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
43 22 31 79
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
72 8 24 71
Total protein-coding genes (size: 11390 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 211 (5.56%)
Alanine (Ala, A)
n = 256 (6.75%)
Serine (Ser, S)
n = 258 (6.8%)
Threonine (Thr, T)
n = 366 (9.65%)
Cysteine (Cys, C)
n = 21 (0.55%)
Valine (Val, V)
n = 173 (4.56%)
Leucine (Leu, L)
n = 652 (17.19%)
Isoleucine (Ile, I)
n = 315 (8.3%)
Methionine (Met, M)
n = 197 (5.19%)
Proline (Pro, P)
n = 217 (5.72%)
Phenylalanine (Phe, F)
n = 211 (5.56%)
Tyrosine (Tyr, Y)
n = 132 (3.48%)
Tryptophan (Trp, W)
n = 103 (2.72%)
Aspartic acid (Asp, D)
n = 64 (1.69%)
Glutamic acid (Glu, E)
n = 91 (2.4%)
Asparagine (Asn, N)
n = 168 (4.43%)
Glutamine (Gln, Q)
n = 93 (2.45%)
Histidine (His, H)
n = 101 (2.66%)
Lysine (Lys, K)
n = 93 (2.45%)
Arginine (Arg, R)
n = 65 (1.71%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
128 187 157 67 161 297 47 57 82 11 31 55 67 20 65 146
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
40 6 15 42 133 68 13 20 95 69 27 33 107 73 4 42
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
166 136 22 33 96 73 8 7 41 41 91 19 23 32 136 20
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
81 71 20 19 45 85 8 5 27 29 4 1 1 3 2 84
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
795 1048 1189 762
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
450 1049 747 1548
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
269 1582 1352 591 

Error: F​a​i​l​e​d​ t​o​ u​n​d​e​r​s​t​a​n​d​ i​d​:​ ?​t​e​r​m​=​(​"​H​y​l​o​b​a​t​e​s​
F​a​i​l​e​d​ t​o​ u​n​d​e​r​s​t​a​n​d​ i​d​:​ p​i​l​e​a​t​u​s​"​[​O​r​g​a​n​i​s​m​]​)​
F​a​i​l​e​d​ t​o​ u​n​d​e​r​s​t​a​n​d​ i​d​:​ A​N​D​
F​a​i​l​e​d​ t​o​ u​n​d​e​r​s​t​a​n​d​ i​d​:​ (​r​e​f​s​e​q​[​f​i​l​t​e​r​]​
F​a​i​l​e​d​ t​o​ u​n​d​e​r​s​t​a​n​d​ i​d​:​ A​N​D​
F​a​i​l​e​d​ t​o​ u​n​d​e​r​s​t​a​n​d​ i​d​:​ m​i​t​o​c​h​o​n​d​r​i​o​n​[​f​i​l​t​e​r​]​)​
Contact: Vadim E. Fraifeld, MD, PhD

Head: Lab for the Biology of Aging, The Shraga Segal Department of Microbiology, Immunology and Genetics, Faculty of Health Sciences, Ben-Gurion University of the Negev
P.O. Box 653, Beer-Sheva 8410501, Israel

Email:
How to cite us:

If you would like to cite this database please use:
Toren D, Barzilay T, Tacutu R, Lehmann G, Muradian KK, Fraifeld VE. MitoAge: a database for comparative analysis of mitochondrial DNA, with a special focus on animal longevity. Nucleic Acids Res. 2016; 44(D1):D1262-5.