Viewing data for Alligator mississippiensis
| Scientific name | Alligator mississippiensis |
| Common name | American alligator |
| Maximum lifespan | 73.10 years (Alligator mississippiensis@AnAge) |
| Total mtDNA (size: 16646 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 7163 | 9483 | 4911 | 2252 | 4283 | 5200 |
| Base content per 1 kb (bases) | 430 | 570 | 295 | 135 | 257 | 312 |
| Base content (%) | 43.0% | 57.0% | ||||
| Total protein-coding genes (size: 11381 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 4949 | 6432 | 3556 | 1393 | 2987 | 3445 |
| Base content per 1 kb (bases) | 435 | 565 | 312 | 122 | 262 | 303 |
| Base content (%) | 43.5% | 56.5% | ||||
D-loop:
No data available for this section.
| Total tRNA-coding genes (size: 1589 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 687 | 902 | 414 | 273 | 379 | 523 |
| Base content per 1 kb (bases) | 432 | 568 | 261 | 172 | 239 | 329 |
| Base content (%) | 43.2% | 56.8% | ||||
| Total rRNA-coding genes (size: 2566 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 1138 | 1428 | 669 | 469 | 534 | 894 |
| Base content per 1 kb (bases) | 443 | 557 | 261 | 183 | 208 | 348 |
| Base content (%) | 44.3% | 55.7% | ||||
| 12S rRNA gene (size: 976 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 469 | 507 | 265 | 204 | 190 | 317 |
| Base content per 1 kb (bases) | 481 | 519 | 272 | 209 | 195 | 325 |
| Base content (%) | 48.1% | 51.9% | ||||
| 16S rRNA gene (size: 1590 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 669 | 921 | 404 | 265 | 344 | 577 |
| Base content per 1 kb (bases) | 421 | 579 | 254 | 167 | 216 | 363 |
| Base content (%) | 42.1% | 57.9% | ||||
| ATP6 (size: 678 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 295 | 383 | 229 | 66 | 179 | 204 |
| Base content per 1 kb (bases) | 435 | 565 | 338 | 97 | 264 | 301 |
| Base content (%) | 43.5% | 56.5% | ||||
| ATP8 (size: 162 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 67 | 95 | 54 | 13 | 39 | 56 |
| Base content per 1 kb (bases) | 414 | 586 | 333 | 80 | 241 | 346 |
| Base content (%) | 41.4% | 58.6% | ||||
| COX1 (size: 1555 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 691 | 864 | 445 | 246 | 421 | 443 |
| Base content per 1 kb (bases) | 444 | 556 | 286 | 158 | 271 | 285 |
| Base content (%) | 44.4% | 55.6% | ||||
| COX2 (size: 688 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 299 | 389 | 214 | 85 | 170 | 219 |
| Base content per 1 kb (bases) | 435 | 565 | 311 | 124 | 247 | 318 |
| Base content (%) | 43.5% | 56.5% | ||||
| COX3 (size: 784 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 362 | 422 | 247 | 115 | 208 | 214 |
| Base content per 1 kb (bases) | 462 | 538 | 315 | 147 | 265 | 273 |
| Base content (%) | 46.2% | 53.8% | ||||
| CYTB (size: 1159 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 511 | 648 | 366 | 145 | 315 | 333 |
| Base content per 1 kb (bases) | 441 | 559 | 316 | 125 | 272 | 287 |
| Base content (%) | 44.1% | 55.9% | ||||
| ND1 (size: 966 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 428 | 538 | 296 | 132 | 269 | 269 |
| Base content per 1 kb (bases) | 443 | 557 | 306 | 137 | 278 | 278 |
| Base content (%) | 44.3% | 55.7% | ||||
| ND2 (size: 1062 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 422 | 640 | 320 | 102 | 289 | 351 |
| Base content per 1 kb (bases) | 397 | 603 | 301 | 96 | 272 | 331 |
| Base content (%) | 39.7% | 60.3% | ||||
| ND3 (size: 348 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 153 | 195 | 109 | 44 | 97 | 98 |
| Base content per 1 kb (bases) | 440 | 560 | 313 | 126 | 279 | 282 |
| Base content (%) | 44.0% | 56.0% | ||||
| ND4 (size: 1374 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 595 | 779 | 440 | 155 | 366 | 413 |
| Base content per 1 kb (bases) | 433 | 567 | 320 | 113 | 266 | 301 |
| Base content (%) | 43.3% | 56.7% | ||||
| ND4L (size: 294 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 131 | 163 | 91 | 40 | 85 | 78 |
| Base content per 1 kb (bases) | 446 | 554 | 310 | 136 | 289 | 265 |
| Base content (%) | 44.6% | 55.4% | ||||
| ND5 (size: 1812 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 771 | 1041 | 565 | 206 | 475 | 566 |
| Base content per 1 kb (bases) | 425 | 575 | 312 | 114 | 262 | 312 |
| Base content (%) | 42.5% | 57.5% | ||||
| ND6 (size: 516 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 228 | 288 | 183 | 45 | 78 | 210 |
| Base content per 1 kb (bases) | 442 | 558 | 355 | 87 | 151 | 407 |
| Base content (%) | 44.2% | 55.8% | ||||
| ATP6 (size: 678 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
Amino acid frequencies:
Glycine (Gly, G)
n = 7 (3.11%) 
Alanine (Ala, A)
n = 13 (5.78%) 
Serine (Ser, S)
n = 15 (6.67%) 
Threonine (Thr, T)
n = 24 (10.67%) 
Cysteine (Cys, C)
n = 0 (0%) 
Valine (Val, V)
n = 7 (3.11%) 
Leucine (Leu, L)
n = 60 (26.67%) 
Isoleucine (Ile, I)
n = 23 (10.22%) 
Methionine (Met, M)
n = 10 (4.44%) 
Proline (Pro, P)
n = 16 (7.11%) 
Phenylalanine (Phe, F)
n = 7 (3.11%) 
Tyrosine (Tyr, Y)
n = 3 (1.33%) 
Tryptophan (Trp, W)
n = 4 (1.78%) 
Aspartic acid (Asp, D)
n = 1 (0.44%) 
Glutamic acid (Glu, E)
n = 4 (1.78%) 
Asparagine (Asn, N)
n = 10 (4.44%) 
Glutamine (Gln, Q)
n = 9 (4.0%) 
Histidine (His, H)
n = 5 (2.22%) 
Lysine (Lys, K)
n = 4 (1.78%) 
Arginine (Arg, R)
n = 3 (1.33%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 10 | 13 | 7 | 4 | 13 | 24 | 5 | 11 | 9 | 0 | 0 | 4 | 2 | 1 | 2 | 5 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 3 | 0 | 0 | 3 | 8 | 2 | 0 | 0 | 4 | 0 | 3 | 2 | 5 | 9 | 0 | 5 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 8 | 10 | 1 | 1 | 7 | 3 | 1 | 0 | 3 | 2 | 1 | 0 | 3 | 2 | 8 | 0 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 5 | 4 | 0 | 0 | 1 | 4 | 0 | 0 | 0 | 3 | 0 | 0 | 0 | 1 | 0 | 4 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 32 | 79 | 74 | 41 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 17 | 65 | 37 | 107 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 17 | 85 | 93 | 31 | ||||||||||||
| ATP8 (size: 162 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: MPQLNPEPWLTTFLIVWISLIVILQPKIASLMLTSSPTPYKAMTIKTWPWPWT* | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 0 (0%)
Alanine (Ala, A)
n = 2 (3.77%)
Serine (Ser, S)
n = 4 (7.55%)
Threonine (Thr, T)
n = 7 (13.21%)
Cysteine (Cys, C)
n = 0 (0%)
Valine (Val, V)
n = 2 (3.77%)
Leucine (Leu, L)
n = 7 (13.21%)
Isoleucine (Ile, I)
n = 6 (11.32%)
Methionine (Met, M)
n = 3 (5.66%)
Proline (Pro, P)
n = 8 (15.09%)
Phenylalanine (Phe, F)
n = 1 (1.89%)
Tyrosine (Tyr, Y)
n = 1 (1.89%)
Tryptophan (Trp, W)
n = 5 (9.43%)
Aspartic acid (Asp, D)
n = 0 (0%)
Glutamic acid (Glu, E)
n = 1 (1.89%)
Asparagine (Asn, N)
n = 1 (1.89%)
Glutamine (Gln, Q)
n = 2 (3.77%)
Histidine (His, H)
n = 0 (0%)
Lysine (Lys, K)
n = 3 (5.66%)
Arginine (Arg, R)
n = 0 (0%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 3 | 3 | 2 | 1 | 3 | 3 | 0 | 0 | 2 | 0 | 2 | 0 | 0 | 0 | 0 | 1 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 1 | 0 | 0 | 0 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 3 | 2 | 3 | 0 | 1 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 2 | 4 | 0 | 0 | 1 | 1 | 0 | 0 | 2 | 0 | 1 | 0 | 0 | 0 | 1 | 0 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 0 | 1 | 0 | 0 | 0 | 3 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 5 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 5 | 17 | 22 | 10 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 7 | 19 | 9 | 19 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 1 | 18 | 25 | 10 | ||||||||||||
| COX1 (size: 1555 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 44 (8.51%)
Alanine (Ala, A)
n = 39 (7.54%)
Serine (Ser, S)
n = 30 (5.8%)
Threonine (Thr, T)
n = 42 (8.12%)
Cysteine (Cys, C)
n = 2 (0.39%)
Valine (Val, V)
n = 37 (7.16%)
Leucine (Leu, L)
n = 59 (11.41%)
Isoleucine (Ile, I)
n = 40 (7.74%)
Methionine (Met, M)
n = 28 (5.42%)
Proline (Pro, P)
n = 31 (6.0%)
Phenylalanine (Phe, F)
n = 45 (8.7%)
Tyrosine (Tyr, Y)
n = 19 (3.68%)
Tryptophan (Trp, W)
n = 17 (3.29%)
Aspartic acid (Asp, D)
n = 14 (2.71%)
Glutamic acid (Glu, E)
n = 9 (1.74%)
Asparagine (Asn, N)
n = 18 (3.48%)
Glutamine (Gln, Q)
n = 8 (1.55%)
Histidine (His, H)
n = 18 (3.48%)
Lysine (Lys, K)
n = 9 (1.74%)
Arginine (Arg, R)
n = 9 (1.74%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 24 | 16 | 24 | 8 | 14 | 26 | 0 | 11 | 7 | 1 | 4 | 9 | 19 | 5 | 18 | 27 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 4 | 0 | 2 | 6 | 18 | 15 | 0 | 2 | 8 | 24 | 10 | 3 | 12 | 16 | 0 | 6 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 17 | 19 | 0 | 6 | 11 | 7 | 1 | 1 | 4 | 8 | 11 | 1 | 0 | 1 | 17 | 2 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 16 | 7 | 2 | 3 | 11 | 9 | 0 | 1 | 1 | 6 | 1 | 0 | 0 | 0 | 0 | 16 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 143 | 114 | 142 | 119 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 77 | 137 | 95 | 209 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 25 | 194 | 206 | 93 | ||||||||||||
| COX2 (size: 688 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 8 (3.51%)
Alanine (Ala, A)
n = 10 (4.39%)
Serine (Ser, S)
n = 16 (7.02%)
Threonine (Thr, T)
n = 19 (8.33%)
Cysteine (Cys, C)
n = 3 (1.32%)
Valine (Val, V)
n = 13 (5.7%)
Leucine (Leu, L)
n = 30 (13.16%)
Isoleucine (Ile, I)
n = 19 (8.33%)
Methionine (Met, M)
n = 12 (5.26%)
Proline (Pro, P)
n = 15 (6.58%)
Phenylalanine (Phe, F)
n = 12 (5.26%)
Tyrosine (Tyr, Y)
n = 10 (4.39%)
Tryptophan (Trp, W)
n = 5 (2.19%)
Aspartic acid (Asp, D)
n = 11 (4.82%)
Glutamic acid (Glu, E)
n = 12 (5.26%)
Asparagine (Asn, N)
n = 9 (3.95%)
Glutamine (Gln, Q)
n = 8 (3.51%)
Histidine (His, H)
n = 9 (3.95%)
Lysine (Lys, K)
n = 3 (1.32%)
Arginine (Arg, R)
n = 5 (2.19%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 9 | 10 | 11 | 3 | 7 | 14 | 1 | 5 | 8 | 0 | 3 | 3 | 7 | 0 | 3 | 9 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 1 | 0 | 3 | 0 | 5 | 5 | 0 | 0 | 1 | 5 | 2 | 3 | 4 | 7 | 1 | 2 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 10 | 7 | 0 | 4 | 4 | 6 | 0 | 0 | 2 | 1 | 9 | 1 | 0 | 2 | 7 | 0 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 9 | 10 | 2 | 4 | 7 | 3 | 0 | 0 | 4 | 1 | 0 | 0 | 0 | 0 | 0 | 4 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 54 | 62 | 64 | 49 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 23 | 58 | 62 | 86 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 8 | 94 | 93 | 34 | ||||||||||||
| COX3 (size: 784 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 18 (6.92%)
Alanine (Ala, A)
n = 20 (7.69%)
Serine (Ser, S)
n = 15 (5.77%)
Threonine (Thr, T)
n = 25 (9.62%)
Cysteine (Cys, C)
n = 1 (0.38%)
Valine (Val, V)
n = 18 (6.92%)
Leucine (Leu, L)
n = 35 (13.46%)
Isoleucine (Ile, I)
n = 10 (3.85%)
Methionine (Met, M)
n = 11 (4.23%)
Proline (Pro, P)
n = 12 (4.62%)
Phenylalanine (Phe, F)
n = 23 (8.85%)
Tyrosine (Tyr, Y)
n = 13 (5.0%)
Tryptophan (Trp, W)
n = 12 (4.62%)
Aspartic acid (Asp, D)
n = 4 (1.54%)
Glutamic acid (Glu, E)
n = 7 (2.69%)
Asparagine (Asn, N)
n = 7 (2.69%)
Glutamine (Gln, Q)
n = 7 (2.69%)
Histidine (His, H)
n = 16 (6.15%)
Lysine (Lys, K)
n = 2 (0.77%)
Arginine (Arg, R)
n = 5 (1.92%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 5 | 5 | 9 | 4 | 12 | 11 | 3 | 5 | 7 | 0 | 4 | 7 | 7 | 0 | 7 | 16 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 2 | 0 | 1 | 4 | 11 | 5 | 0 | 2 | 6 | 9 | 1 | 2 | 6 | 4 | 0 | 3 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 10 | 12 | 0 | 2 | 2 | 5 | 2 | 1 | 3 | 5 | 8 | 0 | 0 | 1 | 6 | 5 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 11 | 7 | 0 | 0 | 4 | 2 | 0 | 0 | 1 | 4 | 0 | 0 | 0 | 0 | 0 | 12 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 67 | 70 | 59 | 65 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 40 | 68 | 56 | 97 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 8 | 109 | 99 | 45 | ||||||||||||
| CYTB (size: 1159 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 24 (6.23%)
Alanine (Ala, A)
n = 28 (7.27%)
Serine (Ser, S)
n = 31 (8.05%)
Threonine (Thr, T)
n = 28 (7.27%)
Cysteine (Cys, C)
n = 0 (0%)
Valine (Val, V)
n = 14 (3.64%)
Leucine (Leu, L)
n = 65 (16.88%)
Isoleucine (Ile, I)
n = 31 (8.05%)
Methionine (Met, M)
n = 18 (4.68%)
Proline (Pro, P)
n = 27 (7.01%)
Phenylalanine (Phe, F)
n = 28 (7.27%)
Tyrosine (Tyr, Y)
n = 13 (3.38%)
Tryptophan (Trp, W)
n = 12 (3.12%)
Aspartic acid (Asp, D)
n = 7 (1.82%)
Glutamic acid (Glu, E)
n = 7 (1.82%)
Asparagine (Asn, N)
n = 15 (3.9%)
Glutamine (Gln, Q)
n = 8 (2.08%)
Histidine (His, H)
n = 12 (3.12%)
Lysine (Lys, K)
n = 9 (2.34%)
Arginine (Arg, R)
n = 9 (2.34%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 13 | 18 | 16 | 8 | 14 | 30 | 3 | 9 | 6 | 2 | 5 | 3 | 5 | 1 | 11 | 17 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 2 | 0 | 0 | 6 | 12 | 10 | 0 | 0 | 8 | 14 | 2 | 3 | 9 | 15 | 0 | 4 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 11 | 12 | 1 | 5 | 10 | 12 | 0 | 0 | 4 | 5 | 8 | 1 | 1 | 6 | 9 | 1 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 11 | 6 | 1 | 1 | 6 | 7 | 2 | 0 | 5 | 4 | 0 | 0 | 0 | 0 | 0 | 11 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 80 | 111 | 105 | 90 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 49 | 110 | 71 | 156 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 16 | 145 | 157 | 68 | ||||||||||||
| ND1 (size: 966 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 13 (4.05%)
Alanine (Ala, A)
n = 30 (9.35%)
Serine (Ser, S)
n = 29 (9.03%)
Threonine (Thr, T)
n = 28 (8.72%)
Cysteine (Cys, C)
n = 1 (0.31%)
Valine (Val, V)
n = 13 (4.05%)
Leucine (Leu, L)
n = 66 (20.56%)
Isoleucine (Ile, I)
n = 14 (4.36%)
Methionine (Met, M)
n = 23 (7.17%)
Proline (Pro, P)
n = 24 (7.48%)
Phenylalanine (Phe, F)
n = 17 (5.3%)
Tyrosine (Tyr, Y)
n = 9 (2.8%)
Tryptophan (Trp, W)
n = 8 (2.49%)
Aspartic acid (Asp, D)
n = 5 (1.56%)
Glutamic acid (Glu, E)
n = 10 (3.12%)
Asparagine (Asn, N)
n = 8 (2.49%)
Glutamine (Gln, Q)
n = 5 (1.56%)
Histidine (His, H)
n = 4 (1.25%)
Lysine (Lys, K)
n = 7 (2.18%)
Arginine (Arg, R)
n = 7 (2.18%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 10 | 4 | 17 | 15 | 12 | 24 | 4 | 11 | 4 | 1 | 5 | 3 | 4 | 1 | 8 | 9 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 6 | 0 | 1 | 6 | 11 | 11 | 2 | 0 | 4 | 9 | 0 | 2 | 11 | 10 | 1 | 4 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 14 | 10 | 0 | 4 | 6 | 10 | 2 | 3 | 4 | 5 | 4 | 4 | 0 | 3 | 5 | 0 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 4 | 9 | 1 | 1 | 4 | 6 | 1 | 1 | 1 | 4 | 1 | 0 | 0 | 0 | 1 | 4 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 71 | 95 | 87 | 69 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 36 | 104 | 49 | 133 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 25 | 97 | 133 | 67 | ||||||||||||
| ND2 (size: 1062 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 10 (2.83%)
Alanine (Ala, A)
n = 26 (7.37%)
Serine (Ser, S)
n = 36 (10.2%)
Threonine (Thr, T)
n = 45 (12.75%)
Cysteine (Cys, C)
n = 1 (0.28%)
Valine (Val, V)
n = 13 (3.68%)
Leucine (Leu, L)
n = 67 (18.98%)
Isoleucine (Ile, I)
n = 37 (10.48%)
Methionine (Met, M)
n = 16 (4.53%)
Proline (Pro, P)
n = 16 (4.53%)
Phenylalanine (Phe, F)
n = 15 (4.25%)
Tyrosine (Tyr, Y)
n = 9 (2.55%)
Tryptophan (Trp, W)
n = 9 (2.55%)
Aspartic acid (Asp, D)
n = 1 (0.28%)
Glutamic acid (Glu, E)
n = 8 (2.27%)
Asparagine (Asn, N)
n = 10 (2.83%)
Glutamine (Gln, Q)
n = 11 (3.12%)
Histidine (His, H)
n = 4 (1.13%)
Lysine (Lys, K)
n = 14 (3.97%)
Arginine (Arg, R)
n = 5 (1.42%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 22 | 15 | 11 | 5 | 14 | 33 | 3 | 12 | 10 | 1 | 3 | 1 | 7 | 2 | 9 | 6 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 5 | 0 | 1 | 3 | 7 | 14 | 2 | 0 | 4 | 6 | 0 | 0 | 5 | 11 | 0 | 8 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 21 | 16 | 0 | 7 | 13 | 10 | 1 | 2 | 3 | 2 | 7 | 0 | 0 | 1 | 9 | 1 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 3 | 8 | 0 | 0 | 1 | 14 | 0 | 0 | 1 | 4 | 0 | 0 | 0 | 1 | 0 | 9 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 58 | 91 | 127 | 78 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 30 | 118 | 58 | 148 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 14 | 111 | 166 | 63 | ||||||||||||
| ND3 (size: 1062 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 10 (2.83%)
Alanine (Ala, A)
n = 26 (7.37%)
Serine (Ser, S)
n = 36 (10.2%)
Threonine (Thr, T)
n = 45 (12.75%)
Cysteine (Cys, C)
n = 1 (0.28%)
Valine (Val, V)
n = 13 (3.68%)
Leucine (Leu, L)
n = 67 (18.98%)
Isoleucine (Ile, I)
n = 37 (10.48%)
Methionine (Met, M)
n = 16 (4.53%)
Proline (Pro, P)
n = 16 (4.53%)
Phenylalanine (Phe, F)
n = 15 (4.25%)
Tyrosine (Tyr, Y)
n = 9 (2.55%)
Tryptophan (Trp, W)
n = 9 (2.55%)
Aspartic acid (Asp, D)
n = 1 (0.28%)
Glutamic acid (Glu, E)
n = 8 (2.27%)
Asparagine (Asn, N)
n = 10 (2.83%)
Glutamine (Gln, Q)
n = 11 (3.12%)
Histidine (His, H)
n = 4 (1.13%)
Lysine (Lys, K)
n = 14 (3.97%)
Arginine (Arg, R)
n = 5 (1.42%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 22 | 15 | 11 | 5 | 14 | 33 | 3 | 12 | 10 | 1 | 3 | 1 | 7 | 2 | 9 | 6 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 5 | 0 | 1 | 3 | 7 | 14 | 2 | 0 | 4 | 6 | 0 | 0 | 5 | 11 | 0 | 8 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 21 | 16 | 0 | 7 | 13 | 10 | 1 | 2 | 3 | 2 | 7 | 0 | 0 | 1 | 9 | 1 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 3 | 8 | 0 | 0 | 1 | 14 | 0 | 0 | 1 | 4 | 0 | 0 | 0 | 1 | 0 | 9 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 58 | 91 | 127 | 78 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 30 | 118 | 58 | 148 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 14 | 111 | 166 | 63 | ||||||||||||
| ND4 (size: 1374 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 20 (4.38%)
Alanine (Ala, A)
n = 31 (6.78%)
Serine (Ser, S)
n = 34 (7.44%)
Threonine (Thr, T)
n = 55 (12.04%)
Cysteine (Cys, C)
n = 3 (0.66%)
Valine (Val, V)
n = 11 (2.41%)
Leucine (Leu, L)
n = 97 (21.23%)
Isoleucine (Ile, I)
n = 43 (9.41%)
Methionine (Met, M)
n = 28 (6.13%)
Proline (Pro, P)
n = 26 (5.69%)
Phenylalanine (Phe, F)
n = 16 (3.5%)
Tyrosine (Tyr, Y)
n = 13 (2.84%)
Tryptophan (Trp, W)
n = 10 (2.19%)
Aspartic acid (Asp, D)
n = 7 (1.53%)
Glutamic acid (Glu, E)
n = 7 (1.53%)
Asparagine (Asn, N)
n = 15 (3.28%)
Glutamine (Gln, Q)
n = 14 (3.06%)
Histidine (His, H)
n = 10 (2.19%)
Lysine (Lys, K)
n = 8 (1.75%)
Arginine (Arg, R)
n = 9 (1.97%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 24 | 19 | 23 | 14 | 23 | 38 | 5 | 16 | 14 | 0 | 1 | 2 | 7 | 1 | 9 | 7 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 5 | 1 | 2 | 8 | 12 | 10 | 1 | 3 | 10 | 4 | 3 | 3 | 12 | 10 | 1 | 6 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 25 | 20 | 4 | 4 | 6 | 14 | 2 | 0 | 8 | 4 | 9 | 2 | 1 | 2 | 13 | 5 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 5 | 5 | 2 | 1 | 6 | 7 | 1 | 0 | 4 | 4 | 1 | 0 | 0 | 1 | 0 | 8 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 76 | 139 | 157 | 86 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 50 | 138 | 75 | 195 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 29 | 163 | 181 | 85 | ||||||||||||
| ND4L (size: 294 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 5 (5.15%)
Alanine (Ala, A)
n = 7 (7.22%)
Serine (Ser, S)
n = 10 (10.31%)
Threonine (Thr, T)
n = 12 (12.37%)
Cysteine (Cys, C)
n = 4 (4.12%)
Valine (Val, V)
n = 3 (3.09%)
Leucine (Leu, L)
n = 22 (22.68%)
Isoleucine (Ile, I)
n = 7 (7.22%)
Methionine (Met, M)
n = 6 (6.19%)
Proline (Pro, P)
n = 2 (2.06%)
Phenylalanine (Phe, F)
n = 5 (5.15%)
Tyrosine (Tyr, Y)
n = 1 (1.03%)
Tryptophan (Trp, W)
n = 0 (0%)
Aspartic acid (Asp, D)
n = 1 (1.03%)
Glutamic acid (Glu, E)
n = 2 (2.06%)
Asparagine (Asn, N)
n = 3 (3.09%)
Glutamine (Gln, Q)
n = 1 (1.03%)
Histidine (His, H)
n = 4 (4.12%)
Lysine (Lys, K)
n = 1 (1.03%)
Arginine (Arg, R)
n = 1 (1.03%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 2 | 5 | 6 | 4 | 2 | 8 | 3 | 4 | 1 | 0 | 1 | 2 | 0 | 0 | 1 | 4 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 0 | 2 | 2 | 2 | 3 | 2 | 0 | 0 | 3 | 2 | 0 | 0 | 0 | 1 | 1 | 1 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 4 | 4 | 3 | 1 | 4 | 2 | 2 | 0 | 1 | 0 | 1 | 0 | 1 | 1 | 2 | 2 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 2 | 1 | 1 | 0 | 1 | 1 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 1 | 0 | 0 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 18 | 25 | 30 | 25 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 11 | 30 | 14 | 43 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 11 | 36 | 34 | 17 | ||||||||||||
| ND5 (size: 1812 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 25 (4.15%)
Alanine (Ala, A)
n = 54 (8.96%)
Serine (Ser, S)
n = 47 (7.79%)
Threonine (Thr, T)
n = 59 (9.78%)
Cysteine (Cys, C)
n = 6 (1.0%)
Valine (Val, V)
n = 17 (2.82%)
Leucine (Leu, L)
n = 90 (14.93%)
Isoleucine (Ile, I)
n = 53 (8.79%)
Methionine (Met, M)
n = 37 (6.14%)
Proline (Pro, P)
n = 31 (5.14%)
Phenylalanine (Phe, F)
n = 44 (7.3%)
Tyrosine (Tyr, Y)
n = 12 (1.99%)
Tryptophan (Trp, W)
n = 9 (1.49%)
Aspartic acid (Asp, D)
n = 11 (1.82%)
Glutamic acid (Glu, E)
n = 9 (1.49%)
Asparagine (Asn, N)
n = 29 (4.81%)
Glutamine (Gln, Q)
n = 17 (2.82%)
Histidine (His, H)
n = 18 (2.99%)
Lysine (Lys, K)
n = 27 (4.48%)
Arginine (Arg, R)
n = 8 (1.33%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 29 | 24 | 31 | 13 | 23 | 37 | 6 | 11 | 14 | 3 | 1 | 7 | 8 | 1 | 13 | 31 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 6 | 3 | 3 | 10 | 19 | 25 | 0 | 2 | 8 | 13 | 2 | 5 | 13 | 7 | 6 | 10 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 34 | 14 | 1 | 8 | 8 | 16 | 3 | 2 | 10 | 7 | 5 | 1 | 0 | 6 | 23 | 4 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 14 | 9 | 0 | 1 | 10 | 26 | 1 | 2 | 1 | 5 | 0 | 0 | 0 | 1 | 0 | 8 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 116 | 153 | 217 | 118 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 60 | 179 | 124 | 241 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 30 | 233 | 225 | 116 | ||||||||||||
| ND6 (size: 516 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 23 (13.45%)
Alanine (Ala, A)
n = 11 (6.43%)
Serine (Ser, S)
n = 13 (7.6%)
Threonine (Thr, T)
n = 4 (2.34%)
Cysteine (Cys, C)
n = 6 (3.51%)
Valine (Val, V)
n = 26 (15.2%)
Leucine (Leu, L)
n = 20 (11.7%)
Isoleucine (Ile, I)
n = 5 (2.92%)
Methionine (Met, M)
n = 7 (4.09%)
Proline (Pro, P)
n = 2 (1.17%)
Phenylalanine (Phe, F)
n = 21 (12.28%)
Tyrosine (Tyr, Y)
n = 5 (2.92%)
Tryptophan (Trp, W)
n = 10 (5.85%)
Aspartic acid (Asp, D)
n = 3 (1.75%)
Glutamic acid (Glu, E)
n = 4 (2.34%)
Asparagine (Asn, N)
n = 0 (0%)
Glutamine (Gln, Q)
n = 2 (1.17%)
Histidine (His, H)
n = 1 (0.58%)
Lysine (Lys, K)
n = 2 (1.17%)
Arginine (Arg, R)
n = 6 (3.51%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 5 | 0 | 2 | 2 | 0 | 0 | 1 | 11 | 0 | 2 | 7 | 1 | 6 | 12 | 17 | 4 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 5 | 5 | 1 | 2 | 1 | 2 | 6 | 3 | 1 | 4 | 15 | 1 | 0 | 1 | 0 | 2 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 0 | 1 | 1 | 3 | 0 | 2 | 0 | 8 | 0 | 5 | 0 | 7 | 6 | 0 | 0 | 1 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 0 | 0 | 4 | 3 | 0 | 0 | 2 | 3 | 1 | 2 | 0 | 0 | 1 | 0 | 0 | 3 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 67 | 14 | 27 | 64 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 54 | 22 | 17 | 79 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 62 | 9 | 34 | 67 | ||||||||||||
| Total protein-coding genes (size: 11398 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 203 (5.35%)
Alanine (Ala, A)
n = 279 (7.35%)
Serine (Ser, S)
n = 287 (7.56%)
Threonine (Thr, T)
n = 356 (9.38%)
Cysteine (Cys, C)
n = 28 (0.74%)
Valine (Val, V)
n = 178 (4.69%)
Leucine (Leu, L)
n = 641 (16.88%)
Isoleucine (Ile, I)
n = 302 (7.95%)
Methionine (Met, M)
n = 202 (5.32%)
Proline (Pro, P)
n = 217 (5.72%)
Phenylalanine (Phe, F)
n = 243 (6.4%)
Tyrosine (Tyr, Y)
n = 110 (2.9%)
Tryptophan (Trp, W)
n = 105 (2.77%)
Aspartic acid (Asp, D)
n = 68 (1.79%)
Glutamic acid (Glu, E)
n = 86 (2.26%)
Asparagine (Asn, N)
n = 128 (3.37%)
Glutamine (Gln, Q)
n = 93 (2.45%)
Histidine (His, H)
n = 102 (2.69%)
Lysine (Lys, K)
n = 92 (2.42%)
Arginine (Arg, R)
n = 69 (1.82%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 160 | 142 | 162 | 83 | 142 | 259 | 36 | 109 | 82 | 11 | 37 | 43 | 74 | 24 | 101 | 142 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 40 | 12 | 16 | 51 | 114 | 103 | 11 | 13 | 60 | 92 | 38 | 28 | 83 | 96 | 10 | 54 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 158 | 133 | 11 | 46 | 74 | 92 | 14 | 17 | 44 | 44 | 66 | 17 | 12 | 25 | 103 | 21 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 81 | 73 | 13 | 14 | 54 | 85 | 7 | 7 | 20 | 38 | 4 | 0 | 1 | 7 | 1 | 88 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 814 | 1001 | 1142 | 841 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 467 | 1078 | 687 | 1566 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 250 | 1342 | 1493 | 713 | ||||||||||||
>NC_001922.1 Alligator mississippiensis mitochondrion, complete genome CAACAGACTTAGTCCTGGTCTTTTCATTAGCTAGTACTCAACTTATACATGCAAGCATCCGCGAACCAGT GAGAACACCCTACAAGTCTGACAGACGAATGGAGCCGGCATCAGGCACATCAACCGATAGCCCAAAACGC CTAGCCCAGCCACACCCCCAAGGGTCTCAGCAGTGATTAACCTTAAACCATAAGCGAAAGCTTGATTTAG TTAGAGTAGATATAGAGGCGGTCAACTCTCGTGCCAGCAACCGCGGTTAGACGAAAACCTCAAGTTAATT GACAAACGGCGTAAATTGTGGCTAGAACTCTATCTCCCCCATTAGTGCAGATACGGTATCACAGTAGTGA TAAACTTCATCACACCGCAAACATCAACACAAAACTGGCCCTAATCTCAAAGATGTACTCGATTCCACGA AAGCTGAGAAACAAACTGGGATTAGATACCCCACTATGCTCAGCCCTTAACATTGGTGTAGTACACAACA GACTACCCTCGCCAGAGAATTACGAGCCCCGCTTAAAACTCAAAGGACTTGACGGCACTTTAAACCCCCC TAGAGGAGCCTGTCCTATAATCGACAGTACACGTTACACCCGACCACCTTTAGCCTACTCAGTCTGTATA CCGCCGTCGCAAGCCCGTCCCATTTGAGGGAAACAAAACGCGCGCAACAGCTCAACCGAGCTAACACGTC AGGTCAAGGTGCAGCCAACAAGGTGGAAGAGATGGGCTACATTTTCTCAACATGTAGAAATATTCAACGG AGAGCCCTATGAAATACAGGACTGTCAAAGCCGGATTTAGCAGTAAACTGGGAAAGAATACCTAGTTGAA GTCGGTAACGAAGTGCGTACACACCGCCCGTCACCCTCCTCGAACCCAACAAAATGCCCAAACAACAGGC ACAATGTTGGGCAAGATGGGGAAAGTCGTAACAAGGTAAGCGTACCGGAAGGTGCACTTGGAACATCAAA ATGTAGCTTAAATTTAAAGCATTCAGTTTACACCTGAAAAAGTCCCACCATCGGACCATTTTGAAACCCA TATCTAGCCCTACCTCCTTTCAACATGCTTAATACAAACCTCAAACCAAAACATTTATCTAACACTTTAG TATTGGCGAAAGAAAATATAATCAGGCGCAACAGATAAAGTACCGCAAGGGAAAAAATGAAATAAAAATG AAAACATAAGTAAAACACAGCAAAGACCAACCCTTCTACCTTTCGCATCATGGTTTAGCAAACCACAACT GGCAAAAAGAATTTAAGTCACACAACCCGAAACTAGGTGAGCTACTAACTAGCAGCTAAATTTGAGCTAA CCCCCCTCTGTGGCAAAAGAGCGGGAAGACTACTTAGTAGAAGTGAAAAGCCTACCGAACCTAGTGATAG CTGGCTGCTTGGAAAATGAATCTTAGTTCCACTGTAAATTCTCCTAACTACCACAACGAAGGATAAGGAA GAATTTTCAAGCTATTTAATAGAGGTACAGCTCTATTAATGCAGGACTCAACCTCCACTTAAGGGTAATC CATCCCATTCCTCGGACTGTGGGCCTTAAAGCAGCCACCACAAAAAAGCGTCAAAGCTTAACTCCAAAAA ATACCAACAACAAATCGAACCCTACATCATAACCAAGCCATCCTACAACCCTAGAAAAGATTATGCTAAA ATGAGTAATAAGAAAACGACTTTCTCCTTTGCGTCAGCCTACATCCTACATGACACCCTATAGATTATTA ACAGCCGCTTCCTACACCACCCCACAAAAAACAAAAAGAAGACCTCACCTGTTGAACCCAACACAGGAAC GCAACAGGAAAGGCTAAACCTTGCAAAAGGAACTCGGCAAACAAAGATTCCGACTGTTTACCAAAAACAC AGCCCCTAGCCCCCTCAGTATTAGGGGTGATGCCTGCCCAATGATTTCCAATTGAATGGCCGCGGTATAT ACAACCGTGCGAAGGTAGCGTAATCACTTGTTCTCCAAATAAGGACCAGTATGAACGGCTAAACGAGAAT CTAACTGTCTCCTGCAAGCAACCAATGAAATTGATCTCCCTGTGCAAAAGCAGGAATGACCCCACCAGAC GAGAAGACCCTGTGAAACTTTAACCGACTAAGTCACACACTAGGAACAACACAACCCACAACCACCTTAA ACCCATGACTTAGCGCTTTTGGTTGGGGTGACCCTAAAACAAAAAAAAACTTTTAAGACAATCATAACAA AATTAGACTATTAACTAAGACCCACACCTCAAAGTACTTAACTGTAATTAGATCCGACAATGTCGATCCA CGAACTAAGCTACTCCAGGGATAACAGCGCAATCCCCTTCAAGAGCCCCTATCGACAAGGGGGTTTACGA CCTCGATGTTGGATCAGGACACCCCATTGGTGTAACCGCTATTAATGGTTCGTTTGTTCAACGATTAAAG TCCTACGTGATCTGAGTTCAGACCGGAGTAATCCAGGTCGGTTTCTATCTATGACTATGTCTCTTCCTAG TACGAAAGGACCGGGGAAACAAGGCCCATGCCACCAAAGTACGCCTTACCTATAATTTAATGCACGTAAC TAAATTAATAATTAGGATAAACACTACTTCTCAAAACAAGAGAACGCTAGGTTGGCAGAGCCTGGCTTAA TGCAAAAGGCCTAAACCCTTTACTCAGAGATTCAAATCCTCTACCTAGCAATAGACTCCCTCACTATTGT ACCCCCAGCATTACTAATTATCTCCATCTTAATAGCAGTTGCATTTTTAACAGCGCTAGAACGAAAAATT ATAGGCCACATACAACTACGAAAAGGACCAAACATTGTTGGCCCCCTTGGCCTACTTCAACCATTTGCCG ATGGACTTAAACTTATTACCAAAGAGTTAACCCTTCCCCTGCTTGCCACCCCTACCCTTTTCATCCTGGC CCCAACAGCTGCCTTAATACTTGCTCTCGCCATGTGGTCCCCCCTCCCCATACCATCTCCGCTCGCAGAC CTAAACCTTGGATTATTACTCTTACTCGCAATATCAAGCCTTATGGTTTATTCGTTCCTATGATCAGGAT GATCATCAAATTCTAAATATGCCCTAATGGGCGCCATACGGGCAGTTGCTCAAACCATCTCCTATGAAGT AACACTAGCCATTATTGTCCTATCTATTGTCCTACTGAGTGGAGGATTCTCACTTCACACCCTTACTGTC ACACAAGAACCCCTATACCTTGCGCTAGCTACATGGCCCTCAATAATAATATGGTATACTTCCACACTAG CAGAAACAAACCGCGCCCCCTTTGACTTAACAGAAGGAGAATCGGAACTAGTATCCGGATTTAATGTAGA ATACAGTGCAAGCCCTTTCGCACTTTTTTTCCTAGCTGAATATGCCAACATTATATTAATAAATACACTC ACCACCACCCTGTTTCTCAGCCCATCAACCCCCACCTTCCTCCCAGCACTATTCACCATTGCCCTAATAA GCAAGGCTCTCCTACTAACCATAAGTTTCTTATGGGTTCGAGCATCTTACCCCCGATTTCGTTACGACCA GCTTATGCACCTCCTATGAAAAAACTTCCTACCCATAACACTAACCCTCTGCCTATGACACTCATCAGTG CCAATATCAATGTTTGGACTACCACCAATGACTTAGGATCCGTGCCTGAACCATAAAGGGCTACTTTGAT AGAGTAGATAATAGGGGTTAGAGCCCCCTCGCATCCTAGGGAGATAGGATTCGAACCTATTCAAAAGGAA TCAAAATCCTTCCTACTTCCCTTATAGTACCCCCTAGAAGTGTAAGCTAACCAAAGCTATTGGGCCCATA CCCCAAAAATGAAGACTAACTCCTTCCACTCCTACCACATGCCCCTCTCCCAACCAATTATCCTAGCAAC ACTAACCATTACAACACTAATTTTTCTACTATCAACCCATCTGGTCCTAATCTGAGTTGCACTAGAACTT AACACACTAGCGATCCTCCCCCTAATTGCTCACAAATCTCACCCACGAGCCATCGAAGCCTCCACAAAAT ATTTTCTCACCCAGGCAATAGCATCTGCATTAATTATCTTTTCAGGAACACTAAATTACGAAATGACAGG AAGCTGCCAAATTGTAGAATTAACAAACTTAACTTCAATAATTGTGCTAACCCTTGCCCTATTTATTAAA GTGGGATTAGTACCATTTCACTTCTGAGTACCAGAAGTTCTCCAAGGAATATCCACAACTGCCGCAATCT TCCTATTAACCTGACAAAAACTAGGACCATTAATTATACTATTCCTAATTAGCCCCCTTATCAACTTTGA ATTAACCTCTGTAGTAGCTACTTTATCTTCCCTTGTTGCAGGCTGAATGGGACTAAACCAAACTCAAGTA CGAAAATTAATAGCACTATCGTCCATTGCCCAAATAGCATGAATTATCGTAATTATTAAATACGCACCAT CACTAGCCATCCTAACCTTCTACATCTACTCCACCACCATCTCCGCTACACTGTTAACACTAGACAAAAT ATCAACAACCTCCATTAAATACCTCATTATTTCTTTTTCAAAATCCCCAATCACCACCACCATCCTGATA ATTTCCCTCCTATCACTATCCGGCCTCCCACCCCTAGCCGGCTTTATACCAAAATGATTAACAATCAACC AACTCCTCGCAGAAAAAGCAATTTGAATTGCACTATTAATACTAATTACATCCCTTCTAAGTCTATTCTT CTATCTCCGACTATGATACAACTCCTCATCAACTATGCCACCAAGCACTACCAACACAACCCGCCTCTGA CGAAAATCTACCCCCCAAAGTAACTTTACCATCAACCTCCTCACCATAGCGACCACCACTCTCCTACTAT CAACCACACTAATGAAAGCAATTACTAAACAAGAATACTCTCTAGGCTAAAAGAAATTAGGTTTAAATTC CAAGCCGAGGGCCTTCAAAGCCCTAAATGGGAGTAAACAACCCCCCATTTCTTGATTTAAGGTTTGCAGG ACTCTATCCGGCATCTTCAAAGTGCAAATCAGAAACTTTAATTAAGCTAAAACCTCAATAAACAGGCGAG CTTCGATCTCACAAATATTTAGTTAACAGCTAAACACTCCAACCAACGAGTTTCTGTTTATCCCAAACCC CAGTACTACTTAAAGTACATCTACGAATTTGCAATCCGTTATGAATTTCACTATGAGGCTTGATAAAGAA GGGAATCAAACCCTCGTAAATAGGTTTACAGCCTACCGCCATTAACACTCGGCCACCTTACCCGTGAACT TCCACCGTTGACTCTTCTCTACTAACCACAAAGACATTGGCACCCTTTACTTCATTTTCGGAACTTGAGC CGGAATGGTGGGAACAGCACTTAGCCTCCTTATTCGGACAGAATTAAGCCAGCCCGGACCTCTATTAGGT GATGACCAAATTTATAACGTAATTGTCACCGCCCATGCCTTCATTATAATCTTTTTTATAGTAATACCAA TTATAATTGGAGGGTTTGGAAACTGGCTATTACCCCTAATAATCGGAGCCCCAGACATGGCATTCCCCCG AATAAACAACATAAGTTTCTGATTACTCCCCCCATCTTTCACACTACTACTCTCCTCAGCCTGCATCGAA GCAGGTGCTGGAACAGGGTGAACCGTCTACCCTCCCCTAGCCGGAAACCTAGCCCACGCCGGGCCATCCG TAGATTTAACTATCTTCTCTCTACACTTAGCCGGAGTATCTTCCATCCTCGGAGCAATTAACTTTATTAC AACAGCAATCAACATAAAACCCCCAGCAATATCCCAATACCAAACACCACTATTTGTGTGATCCGTCCTA ATTACAGCTGTACTTCTCCTACTATCCCTACCAGTACTAGCTGCTGGAATTACAATACTACTCACAGACC GCAACTTAAACACAACCTTCTTTGACCCCGCAGGGGGAGGAGATCCCATCCTATACCAACACCTCTTCTG ATTCTTTGGCCACCCAGAAGTATATATCCTAATTCTTCCAGGGTTCGGAATAATTTCCCACGTAGTAGCC TTTTATTCAGGCAAAAAAGAACCATTCGGCTATATAGGAATAGCATGAGCCATATTATCCATTGGATTCT TAGGGTTCATCGTCTGAGCCCACCACATATTTACAGTCGGAATAGACGTAGACACCCGAGCATACTTTAC CACCGCCACAATAATCATTGCCGTTCCCACCGGGGTAAAAGTATTTAGCTGACTAGCCACCATCTATGGC GGCATTGTTAACTGACAAGCCCCAATACTCTGAGCACTAGGCTTCATCTTCTTATTTACCGTCGGGGGCC TAACTGGGATTGTCCTAGCCAACTCCTCACTAGACATTGTCCTCCACGACACTTATTATGTAGTGGCCCA CTTCCACTACGTACTCTCAATAGGAGCAGTCTTCGCTATCATGAGCGGATTCACCCACTGATTCCCACTC TTTACAGGATTTACCCTTCACCCAACATGAACTAAAATCCAATTTGTAATTATATTTACCGGAGTAAATT TTACCTTCTTCCCACAACACTTCCTAGGACTATCTGGGATACCTCGACGATACTCGGACTACCCAGACGC ATACACCCTCTGAAACCTAACATCATCAATTGGATCCTTAATTTCCATGGTTGCAGTTATCCTTCTAATA TTTATTATCTGAGAAGCATTCACATCAAAACGAAAAGTGACAGCACTCGAAATAACAATAACCAACATTG AGTGACTTAACAACTGCCCCCCATCTCATCACACCTACGAAGAGCCCGTATTCGCTGTAGTACGACCCAA ATACTATGGCCCAAGGACAGAGGGAATCGAACCCCCACCATCTGGTTTCAAGCCAGCCGCAATACCACCA TGCTCCATCCTCCTCTGAGAGGGGTTAGTATACTCTATATTACCTATTCTTGTCAAGAACAGAAAATAGG ATTGAACCCTATACCCCTCTATAGCCAACCCGACACACCTAGGATTCCAAGATGCAATATCTCCCTTAAT AGAAGAGCTACTATATTTTCACGACCACACATTAATAATCCTCTTCCTTATTAGCTCCCTCGTATTTTAC ATAATCTTCGCCCTATTATTCCCTAAACTATACTACCCAAACACCTCAGACGTTCAAGAAGTAGAAGTAA TCTGAACCGTCCTACCAGCCATTGTCCTCATCTCAATTGCCCTACCATCACTACGCACCCTATACCTCAT AGACGAAACCAATAACCCCTGCCTGACTATTAAAGTAACCGGACACCAATGATACTGATCTTACGAATAC ACCGACTTCTCAACACTCGAATTTGACTCCTACATAATTCCCACACAAGATCTTCCCCAAGGACACTTCC GCCTACTAGAAGTTGACCACCGCATAATCACCCCAACTAACTCAACCATCCGAGTACTAATTACAGCAGA AGATGTACTACACTCATGGGCAATCCCATCCATTGGGACAAAAATGGACGCAGTCCCAGGACGCTTAAAC CAAGTTATAATTACACTTGCCAATCCTGGAGTATTCTACGGCCAATGCTCTGAGATCTGCGGGGCAAACC ACAGCTTCATACCTATCACCATAGAAACCATCCCACTAAACCACTTCCAACTCTGATTAGAAGATTCTAT TCTCTCCTCACTAAGAAGCTAAATAGTCAGCACTAGCCTTTTAAGCTAGGATTAGGGGACTAGTATTACC CCCTCCCCCTTAGTGACCATGCCACAACTAAACCCAGAACCTTGACTAACAACCTTCCTAATCGTTTGAA TCTCCCTTATTGTTATTCTCCAACCCAAAATCGCCTCACTCATACTCACAAGCAGCCCAACCCCTTACAA AGCCATAACTATTAAAACATGACCCTGACCTTGAACATAAACCTATTTGACCAATTCCTAACCCCAAGCC TCCTAGGCATCTCCTTGCTTATACCCGCCCTACTAATAACCACTATCCTACTTCTAAACCCAAAAAATCA ATGATTGTCGCACCCCACAACAACAATCAAATCCTGATTTATTAACCAAGCCGCCAAACAAATTATGACC CCAATTAACCCCACCGGGCACAAACACTCCTTAATCCTCATCTCCTTACTAATTCTCCTCTCTCTCACTA ACCTGCTTGGCCTGCTTCCATATACCTTCACCCCTACAACACAACTATCCATAAACATAGCCATCGCCCT CCCCCTCTGACTAGTGACAGTATTAATTGGGTTGCGAACTCAACCAACAACCTCCCTAGCCCACCTCCTA CCAGAAGGGACTCCTATGCTCCTAATCCCAATCCTAATTTTAATCGAAACAATTAGCCTGCTAATTCGAC CAATTGCCCTGGGCGTCCGACTAACGGCTAACCTAACTGCAGGCCACCTGCTAATTCAACTAATCTCAAT CGCCACATTAAACCTCTGATTCATGATACCCCCACTCAGCCTATTAACCTCAACAGTCTTAATCCTCCTA TTACTACTAGAATTCGCTGTAGCTATAATCCAAGCATACGTCTTCGTCCTCTTATTATCCCTATATTTAC AAGAAAATTCATAATGTCACACCAAACACACCTCTTCCATATAGTCAACCCAAGTCCCTGACCCCTCGCC GGAGCTATAGCCGCCATACTACTAACAACAGGCCTAACTCTTTGATTTCATTACAACTCCAACCTACTGC TACTATTAGGTCTAGTTACCACCATACTAGTAATATATCAATGATGACGAGACGTTGTCCGAGAAAGCAC CTACCTGGGACACCACACACCCGCAGTACAAAAAGGATTACGCTATGGTATAATCCTCTTTATTACATCA GAAGTTTTCTTCTTCCTAGGCTTTTTCTGAGCATTCTACCACTCAAGCTTATCTCCTACCCCTGAATTAG GAGGACAATGACCCCCAACCGGGATTACCCCCCTTGACCCATTTGAAGTCCCACTCCTCAACACAGCTGT CCTACTCGCCTCCGGAGTAACAGTAACATGAGCCCACCATAATTTAATAACCGCCAACCGAATACAAGCA ATTCATGCCCTAACACTCACCGTACTCCTGGGCTTTTACTTCACCGCCCTCCAAGCCATAGAATACTATG AAGCCCCCTTTACTATTGCAGACAGCACCTACGGATCAACATTCTTCGTTGCAACTGGCTTCCACGGCCT CCACGTCATCATTGGCTCAACATTCCTCATGATCTGCCTTTATCGACAAGTAAAATTCCACTTCACATCT AACCACCATTTCGGATTCGAAGCTGCTGCCTGATACTGACACTTTGTAGACGTCGTCTGACTTTTCCTCT ATATCTCGATCTACTGATGAGGATCGTGCTTTTCTAGTACAAACAATACAAGTGACTTCCAATCACTAGA CCCCCCAATTATCCCACCAGGGGAAAAGCAATTAACCTATTTATCATACTCACAATATCCTCAATCACCG TTTCAATCGTAGTCGCCCTAAACCTACTGACTGCCAAAACATCACCCGACCCAGAAAAATTATCCCCTTA CGAATGTGGATTCGACCCCCTCGGCTCTGCTCGCTTACCCCTATCAATCCGGTTCTTTATAGTAGGCATC CTATTCCTGCTTTTTGACCTTGAAATTGCCATCCTACTACCACTCACATGAGCCATCCACACCCTCAACC CCTTAAAAACTATTACATGAGCCATCATCATCTTCCTATTCCTATTCATTGGACTAGCATACGAATGACT CCAGGGTGGCCTAGAATGAGCAGAATAACAGACCGAGTACACCTAATCACTAAACAACCAGAACTCGTCT AACACAAAGACCTCTAATTTCGGCTTAGAAAATCATGGTTCACCACATGGTTCTACATCATCTCCCCGAC GGGCACCACGTTCATATTCTCCTTCATCATCTGTACCATCGGCCTAATTATATACCATACACACCTGCTT TCGACACTACTTTGCCTTGAGGGAATAATACTGTCAATTTTTATAGCCCTAACAATATTATCGCTCGACT TGCACACCTCCTCATTCATCCTACCATTAACAGTCCTAACCCTATCCGCTTGTGAAGCAGGAGTTGGCCT TGCCTTATTAGTCGCCTCTGCTCGAACTCATAATACGGCAAGCCTCAAAAACCTAAACCTGCTACAATGC TAAAACTTTTATTAGCCACATTCATGTTAATCCCTACGACCCCCCTGCTCCCAAATAAAATTACTTGACT AACTCCAACAACCTACTCAATTATCGTAACAGCCCTGGCCCTACTGGTCCTCAACCCCTCAGACATCTTT ATAAACACCAGCGGCCCAGCCCTAGGCAGCGACCAACTCTCAACCCCCCTAATAATTCTATCCTGCTGAC TTCTTCCCTTAATACTTATAGCCAGCCAAAACTCCATACTTAAAACCCCTGCCCCCCAAAACCACACATT TATTACAATTCTTGCAATACTTCAATTCACCCTACTCATAACCTTTATAGCCCTAGACCTCATATTATTT TACATTTCCTTTGAAGCCACCTTAATCCCCACCCTCATCATTATCTCACGGTGAGGAGCCCAAGCAGATC GCCTAAACGCAGGCATTTACTTCCTGTTTTATACCATTACTAGCTCAATTCCACTAATAATTGGCATTCT AATAATTTACAACCTAAAAGGCACCCTATCCATCCTCACCCTACAACTAACCCCAATAACAGGCCTCATC TCCTGAACAGACACCCTACTATGACTATCAATTCTACTAGCTTTCCTAGTAAAAATCCCCCTCTATGGTT TACATCTATGACTCCCCAAGGCTCATGTAGAAGCTCCCATTGCAGGCTCTATAGTCCTCGCTGCAGTGCT TCTTAAACTAGGCGGTTATGGCCTACTACGAGTAGTAATTTTACTCACTGAGCAAATCAACACAATCTAC CCCCCAATTTTAGGCCTAGCGCTCTGGGGGGCACTTATGACAAGCCTCATCTGCTTGCGACAAACGGACC TAAAATCCCTAATCGCTTACTCATCGGTTAGCCATATGGCCTTAGTAACAGCTGCAATTCTCACCCGAAA CCAACTAACCCCGATAGGGTCAATAATCCTAATGATTGCCCATGGACTAACATCTTCTATATTATTCTGT TTAGCAAACTTCAGCTATGAACGCACCCACACCCGCACACTTCTCGCAATACAAGGAATACAACTTACCA CACCTACTTTAACATCATGGTGATTTCTAGCTAGCATAATAAATATAGCCCTGCCCCCAACAATTAACTT TGTAGGTGAACTAGCTCTCATTACCTCACTTTTTAACTGATCAGAGACGACACTACTATTAACAGGGCTC AACTCTACCATTACTGCAATCTACACGCTCTACATATTCTCGTCAACCCAACAAGGAACACTACCAATCC ACACCCTCATCCTCTCACCCACCCAAACCCGCGAACACCTCTTAATACTATTACACACACTACCATCAAT TATCCTCATCACAAACCCACGACTTATTTACCATGACTAACACCACCCACTCAATATTTAACCGAGAGAG ATCCGCGCAGGAACTGCTAATTCCTAGCCCCCAGGACTAACAGCCTGGCCCTCTCGTCGTGGGCTCGGTA AGTATAGTTTAAACAAAACATTAGAATGTGAACCTAAAAATAGGAGACTACTTCCCCTTACTCACCTTTT CCCACTTTCATAGGATAACTAGGACATCCCCTGGCCTTAGGAGCCAATAATCTTGGTGCAACCCCAAGTG AAAATACCATGCAACAGCCGACCCTATCTCTTACCTTCTTCACCCTACCTGCTTTTATCCTTTTACTATC TCTACTTCATATAACCGCCCACCCGGTCGGTTTTAAAAAAATGATAATTAAACTAGCATTTTTCACAAGC CTCCCTCCCCTTATTTTATTAACTTACAACAACATAGTTCCCCTCTCATTCACTTGACATTGACTCAGCA TAGGAACCTGCCCCATCTACTTAAGCCTTAAACTCGACACCTTCTCAATCTTCTTCGTCCCCACAGCACT GTTTGTCACATGATCAATTATAGAATTCACCGAATTATATATAGATTCAGACCTAAAAATTATTAGCTTC TTTAATCACCTCTTAATCTTTATCCTAATAATAATTATCTTAGTAACTGCCAACAACCTCTTCCAGCTAT TCATTGGCTGAGAAGGAGTAGGCATCATATCATTTAAACTCATCAACTGATGGTCTTTCCGAGCAAACTC CAACAAAGCAGCCCTCCAGGCCATTACCTACAATCGTCTAGCAGACGTCGGAATACTCGCTGCTATATCA TGAATGATCCTAAACAACATCAGTCTGGACATCCAAGACATACCCGTATCTACCAACCACTCACTCATCC CTGCCATTGGCCTCGTCCTAGCAGCAACTGGAAAATCGGCCCAATTCGGTTTCCACCCATGACTCCCGGC AGCAATAGAAGGCCCGACACCAGTCTCAGCTCTACTCCACTCAAGCACCATAGTAGTAGCAGGCATTTTC CTGCTAATCCGAACCTCCCACGTAGTCTATAGCAGTCAAGCAGCAACTACGGCTTGCCTACTCCTGGGAG CAATTACCTCCCTATTCGCAGCCTCTTGCGCCCTCACCCAAAATGACATAAAAAAAATTATCGCATTCTC AACATCGAGCCAACTCGGACTAATAATAGCCACAATTGGATTAAAACAACCCGAACTTGCATTCCTACAC ATTTCAACACACGCCTTTTTTAAAGCAATACTCTTTCTGTGTGCAGGATCAATTATCCACAACCTCAATA ACGAACAAGACATTCGAAAAATAGGGGGCCTTAAAAAAGCAATACCTATCACCACCTCTTGTCTTACTAT CGGAGCACTAGCTCTCACTGGCATGCCCTTCCTCTCAGGATTCTTTTCCAAAGACGCTATTATTGAAGCA CTAAACACCTCTTATATTAACGCCTGTGCCCTTACCCTTGTACTACTTGCTACTTCCTTCACCGCAGTGT ATAGCCTTCGTATAATTTACTTCACCCTATTAAACCCTAACCGACTAACAACCACAAATCCCATCAACGA AAACCCAAAAATTGTAAACCCCATCCTACGCCTAGCCGCCGGAAGCATTATAGCTGGCCTACTAATTTCA TCCTCTATATTACCATCCAACACCCCCCAACTAACCATATCGAACACAGCCAAGCTCGCAGCCCTTATTA TCACAATGATCGGACTACTAATTGCAGCAACCCTAACCCATGCCACCAATAAATTCCCGCCCATTACCAA CGACACCCAACCGCCCTTCCTAACTAAACTAACCTACTTCAACCACCTATTCCACCACTTCTTCCCAACC ACAACCCTGCGAATGAGCCAAAAACTATCAACCCACCTAGCTGACCAAACATGATATGAAGCCCTCGGGC CAAAAATAATAACCCACCTACAAACCCTAATAGCCAAAATCCTCACACCATATCATAAAGGAAAAATAAA ACAATATTTCAAAATCTTCATATTAACTATTATTATAATTATCTTTTTCACCTCCTTTATATCACCCTAA AAGAGCGAAACGCCCCCTGACGATACCCTCGAACAAACCCTGTAATTACGAATAACACCACCAGTAAAGC TCACCCGCACACCACAATGAACGCCCACCCATCAGAATACATCTGACTAACCCCTAACAACTCACTACTA ACTACCTCGCCCCAAAACTCCCCCGCACTAGTCTTTCCCCAACACCACAAACGCCAATATCGTGAATAAA CCCCACGAAAGAACCCCGCCCATCAAAAAAATACGACCCACTTAGACACCCCCACTCCTCAAAACCCCCC AAATGGATCATCAGTAAACCCAACACAAAAAGCAAACACCACCAATAACCCCCCTAAATAAACTAATAAC ACCACTAAAGGCATAAAACTTCCACCCTCAATAATTAACAAACCACTACCGAATACAACTACAAAAAGTA AACTTACCACGGCAAAATGAATTATTGAACTTGCCGCCACCATCATCGCACATGCTAATATCAAACAACA AAGAAACAACGTAAATCCCATTATTTTTATTTGGCCTTCAACCAAAACCTGAGGTCTGAAAAACCCTGTT GTATTTCAACTATAAAAACCCCATGACCCACCAACTACGAAAATCCCACCCAATCATTAAACTCATCAAC CGCTCCCTAATTGACCTACCAACACCCTCAAACATCTCCGCTTGATGAAACTTTGGATCACTACTAGGCC TAACCCTATTAATTCAGATTCTAACAGGATTCTTCTTAATAATGCACTTTTCATCAAGCGATACTCTAGC ATTTTCATCTGTATCCTACACCTCCCGCGAAGTCTGATTTGGATGACTCATCCGCAACCTCCACACAAAT GGGGCCTCCCTGTTCTTTATATTTATCTTTCTTCACATCGGACGAGGCCTATACTACACATCATATCTTC ACGAAAGCACATGAAATATTGGAGTAATCATACTTCTACTCCTAATAGCCACAGCATTTATAGGCTATGT TCTCCCATGAGGACAAATATCATTCTGAGGAGCAACCGTAATCACGAATCTACTTTCTGCCACACCCTAC GTTGGAAGCACTGTCGTGCCATGAATTTGAGGCGGCCCCTCTGTTGACAACGCAACACTTACACGCTTCA CTGCCCTACACTTCCTCCTTCCATTCGCCCTATTGGCTTCACTCATCACCCACCTGATCTTCCTCCATGA ACGAGGATCATTTAACCCCCTAGGAATTAGCCCAAATGCTGACAAAATCCCATTCCACCCCTACTTCACC ATAAAAGACGCCCTAGGAGCAGCACTAGCTGCCTCCTCACTACTCATCTTAGCTCTCTACCTACCAGCCC TATTAGGGGACCCTGAAAACTTCACCCCAGCAAATTCCATAATTACCCCAACACACATCAAACCCGAATG GTACTTCCTATTTGCTTATGCCATTCTACGATCTATTCCAAATAAGTTAGGAGGAGTACTAGCAATATTC TCATCCATTTTAGTCCTATTCCTAATACCCGCCCTACACACAGCAAAACAACAACCAATATCAATACGCC CTATATCTCAGCTTCTATTTTGAGCCCTTACCCTGGACTTCCTCTTACTCACATGAATCGGAGGCCAACC AGTAAACCCCCCATATATTTTAATTGGCCAAACTGCCTCCCTATTCTACTTCATCATCATCCTAATCCTC ATACCAATAGCAGGCCTCTTAGAGAACAAAATAGTTGAACCCACCTATGTTACCCCTAAGTCCCTCCATC CCAACAAGACCAAACCTCACCACACTCCCGTGGCTAAAGGAAAAGCGCTGGCCTTGTAAGACAGAAGTGG ACGGAACCAACCCTCCCGTGAGTACACCAGCACCCTCCGGTATCAAGAAAGCAAACAAAACTTTGCACCT TCGGCCCCCAAAGCCGACATTCTAACTAAACTACTTCTTGTCACAACAGTTATCGTAGCTTAAACACTAA AGCATAACACTGAAAATGTTAACATGGACAGACTAGTCCCGAATAACAACCCCCCAGCACTGCCCCGCCA TAAATACATCAACTTACATCTAACTTATCTCGCCTGTATGTATATCGCGCATTCATTTATTTGCCCCATA CACACATCCTCCCATGTGAATTAACCCACATATATTAAAATTCTTGTTATTCGCGTCAATTTTTCGTTCA GCACTAACTGTTACTAGTTTCAAGCCCATAACTGAATACCACTTCCATAAATTGCTTTTTAAGAGGCCTC TGGTTATCACTCTCATGTATATGTCTTGCGATTGCCTGAACATTCGTTTCTCTTCTTAGAGACCTCAACC CGCACCGTCTTGGTCACCACCCATTAAATCCGTAATCTCAACATCACCAGCTCTCCAGTCCATTTGGTAA GGATTTTATTTTTTTGGGGAAATTCACACATCCCCATAGGCGACTATGCCCCAAATACCCGATCAACAAG TGTAACTTTTAAAGTTTACAAAACTAAGTATTTTCGCCTAAGCTCGCATGCGCATATATTATTTCAACCC CCCCCCCCCCCCCTTTTTCTTTTCTCCAACCACATTATATTATAGGGCCATAATTTTATATTAATATAAC TATAATTTTATATTAATATAACTATAATTTTATATTAATATAACTATAATTTTATATTATAGGGCCATAA TTTTATATTATAGGGCCATAATTTTATATTATAGGGCCATAATTTTATATTATAGGGCCATAATTTTATA TTATAGGGCCATAATTTTATATTATAGGGCCATAATTTTATATTATAGGGCCATAATTTTATATTATAGG GCCATAATTTTATATTATAGGGCCATAATTTTATATTATAGGGCCATAATTTTATATTATAGGGCCATAT TTTATATTATAGGGCCATAATTTTATATTATAGGGCCATAATTTTATATTATAGGGCCATAATTTTATAC ACTAAACTAACAACCCCCATGTTATTATTTCTCCGAGAACTAAAAATCTCTAATAA
Contact: Vadim E. Fraifeld, MD, PhD
Head: Lab for the Biology of Aging, The Shraga Segal Department of Microbiology, Immunology and Genetics, Faculty of Health Sciences, Ben-Gurion University of the Negev
P.O. Box 653, Beer-Sheva 8410501, Israel
Email:
Head: Lab for the Biology of Aging, The Shraga Segal Department of Microbiology, Immunology and Genetics, Faculty of Health Sciences, Ben-Gurion University of the Negev
P.O. Box 653, Beer-Sheva 8410501, Israel
Email:
- How to cite us:
-
If you would like to cite this database please use:
Toren D, Barzilay T, Tacutu R, Lehmann G, Muradian KK, Fraifeld VE. MitoAge: a database for comparative analysis of mitochondrial DNA, with a special focus on animal longevity. Nucleic Acids Res. 2016; 44(D1):D1262-5.
-
Quick links:
- Terms of use
- User guide
- Frequent questions
- Glossary & definitions