Viewing data for Cyprinella lutrensis
| Scientific name | Cyprinella lutrensis |
| Common name | Red shiner |
| Maximum lifespan | 2.00 years (Cyprinella lutrensis@AnAge) |
| Total mtDNA (size: 16706 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 7528 | 9178 | 4461 | 3067 | 4545 | 4633 |
| Base content per 1 kb (bases) | 451 | 549 | 267 | 184 | 272 | 277 |
| Base content (%) | 45.1% | 54.9% | ||||
| Total protein-coding genes (size: 11400 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 5156 | 6244 | 3187 | 1969 | 3268 | 2976 |
| Base content per 1 kb (bases) | 452 | 548 | 280 | 173 | 287 | 261 |
| Base content (%) | 45.2% | 54.8% | ||||
D-loop:
No data available for this section.
| Total tRNA-coding genes (size: 1561 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 719 | 842 | 384 | 335 | 387 | 455 |
| Base content per 1 kb (bases) | 461 | 539 | 246 | 215 | 248 | 291 |
| Base content (%) | 46.1% | 53.9% | ||||
| Total rRNA-coding genes (size: 2639 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 1242 | 1397 | 645 | 597 | 542 | 855 |
| Base content per 1 kb (bases) | 471 | 529 | 244 | 226 | 205 | 324 |
| Base content (%) | 47.1% | 52.9% | ||||
| 12S rRNA gene (size: 956 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 478 | 478 | 252 | 226 | 188 | 290 |
| Base content per 1 kb (bases) | 500 | 500 | 264 | 236 | 197 | 303 |
| Base content (%) | 50.0% | 50.0% | ||||
| 16S rRNA gene (size: 1683 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 764 | 919 | 393 | 371 | 354 | 565 |
| Base content per 1 kb (bases) | 454 | 546 | 234 | 220 | 210 | 336 |
| Base content (%) | 45.4% | 54.6% | ||||
| ATP6 (size: 684 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 277 | 407 | 181 | 96 | 217 | 190 |
| Base content per 1 kb (bases) | 405 | 595 | 265 | 140 | 317 | 278 |
| Base content (%) | 40.5% | 59.5% | ||||
| ATP8 (size: 162 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 65 | 97 | 47 | 18 | 41 | 56 |
| Base content per 1 kb (bases) | 401 | 599 | 290 | 111 | 253 | 346 |
| Base content (%) | 40.1% | 59.9% | ||||
| COX1 (size: 1551 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 674 | 877 | 389 | 285 | 478 | 399 |
| Base content per 1 kb (bases) | 435 | 565 | 251 | 184 | 308 | 257 |
| Base content (%) | 43.5% | 56.5% | ||||
| COX2 (size: 691 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 299 | 392 | 172 | 127 | 194 | 198 |
| Base content per 1 kb (bases) | 433 | 567 | 249 | 184 | 281 | 287 |
| Base content (%) | 43.3% | 56.7% | ||||
| COX3 (size: 784 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 362 | 422 | 208 | 154 | 230 | 192 |
| Base content per 1 kb (bases) | 462 | 538 | 265 | 196 | 293 | 245 |
| Base content (%) | 46.2% | 53.8% | ||||
| CYTB (size: 1141 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 528 | 613 | 336 | 192 | 334 | 279 |
| Base content per 1 kb (bases) | 463 | 537 | 294 | 168 | 293 | 245 |
| Base content (%) | 46.3% | 53.7% | ||||
| ND1 (size: 975 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 485 | 490 | 292 | 193 | 286 | 204 |
| Base content per 1 kb (bases) | 497 | 503 | 299 | 198 | 293 | 209 |
| Base content (%) | 49.7% | 50.3% | ||||
| ND2 (size: 1045 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 510 | 535 | 331 | 179 | 270 | 265 |
| Base content per 1 kb (bases) | 488 | 512 | 317 | 171 | 258 | 254 |
| Base content (%) | 48.8% | 51.2% | ||||
| ND3 (size: 349 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 149 | 200 | 93 | 56 | 106 | 94 |
| Base content per 1 kb (bases) | 427 | 573 | 266 | 160 | 304 | 269 |
| Base content (%) | 42.7% | 57.3% | ||||
| ND4 (size: 1382 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 621 | 761 | 386 | 235 | 412 | 349 |
| Base content per 1 kb (bases) | 449 | 551 | 279 | 170 | 298 | 253 |
| Base content (%) | 44.9% | 55.1% | ||||
| ND4L (size: 297 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 134 | 163 | 87 | 47 | 88 | 75 |
| Base content per 1 kb (bases) | 451 | 549 | 293 | 158 | 296 | 253 |
| Base content (%) | 45.1% | 54.9% | ||||
| ND5 (size: 1836 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 813 | 1023 | 510 | 303 | 521 | 502 |
| Base content per 1 kb (bases) | 443 | 557 | 278 | 165 | 284 | 273 |
| Base content (%) | 44.3% | 55.7% | ||||
| ND6 (size: 522 bases) | GC | AT | G | C | A | T |
|---|---|---|---|---|---|---|
| Base content (bases) | 242 | 280 | 156 | 86 | 97 | 183 |
| Base content per 1 kb (bases) | 464 | 536 | 299 | 165 | 186 | 351 |
| Base content (%) | 46.4% | 53.6% | ||||
| ATP6 (size: 684 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
Amino acid frequencies:
Glycine (Gly, G)
n = 10 (4.41%) 
Alanine (Ala, A)
n = 20 (8.81%) 
Serine (Ser, S)
n = 9 (3.96%) 
Threonine (Thr, T)
n = 22 (9.69%) 
Cysteine (Cys, C)
n = 0 (0%) 
Valine (Val, V)
n = 15 (6.61%) 
Leucine (Leu, L)
n = 48 (21.15%) 
Isoleucine (Ile, I)
n = 19 (8.37%) 
Methionine (Met, M)
n = 11 (4.85%) 
Proline (Pro, P)
n = 17 (7.49%) 
Phenylalanine (Phe, F)
n = 15 (6.61%) 
Tyrosine (Tyr, Y)
n = 3 (1.32%) 
Tryptophan (Trp, W)
n = 5 (2.2%) 
Aspartic acid (Asp, D)
n = 1 (0.44%) 
Glutamic acid (Glu, E)
n = 4 (1.76%) 
Asparagine (Asn, N)
n = 10 (4.41%) 
Glutamine (Gln, Q)
n = 8 (3.52%) 
Histidine (His, H)
n = 3 (1.32%) 
Lysine (Lys, K)
n = 1 (0.44%) 
Arginine (Arg, R)
n = 6 (2.64%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 13 | 6 | 9 | 11 | 7 | 13 | 0 | 14 | 7 | 1 | 6 | 2 | 7 | 0 | 8 | 7 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 2 | 0 | 0 | 5 | 4 | 10 | 1 | 1 | 1 | 3 | 5 | 4 | 4 | 7 | 2 | 6 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 4 | 8 | 4 | 3 | 0 | 2 | 0 | 0 | 4 | 1 | 2 | 1 | 3 | 4 | 6 | 1 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 2 | 2 | 2 | 0 | 1 | 1 | 0 | 0 | 2 | 4 | 0 | 0 | 0 | 1 | 0 | 4 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 50 | 65 | 67 | 46 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 25 | 64 | 31 | 108 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 21 | 52 | 92 | 63 | ||||||||||||
| ATP8 (size: 162 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: MPQLNPSPWFEILVFSWLIIITFIPTKVLDFLTPNKPAPSEMKHKSNPWNWPW* | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 0 (0%)
Alanine (Ala, A)
n = 1 (1.89%)
Serine (Ser, S)
n = 4 (7.55%)
Threonine (Thr, T)
n = 3 (5.66%)
Cysteine (Cys, C)
n = 0 (0%)
Valine (Val, V)
n = 2 (3.77%)
Leucine (Leu, L)
n = 5 (9.43%)
Isoleucine (Ile, I)
n = 5 (9.43%)
Methionine (Met, M)
n = 2 (3.77%)
Proline (Pro, P)
n = 9 (16.98%)
Phenylalanine (Phe, F)
n = 4 (7.55%)
Tyrosine (Tyr, Y)
n = 0 (0%)
Tryptophan (Trp, W)
n = 5 (9.43%)
Aspartic acid (Asp, D)
n = 1 (1.89%)
Glutamic acid (Glu, E)
n = 2 (3.77%)
Asparagine (Asn, N)
n = 4 (7.55%)
Glutamine (Gln, Q)
n = 1 (1.89%)
Histidine (His, H)
n = 1 (1.89%)
Lysine (Lys, K)
n = 4 (7.55%)
Arginine (Arg, R)
n = 0 (0%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 2 | 3 | 1 | 1 | 1 | 1 | 0 | 2 | 1 | 0 | 1 | 0 | 1 | 0 | 1 | 3 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 1 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 4 | 3 | 1 | 1 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 1 | 0 | 1 | 0 | 0 | 1 | 0 | 1 | 2 | 0 | 0 | 1 | 0 | 1 | 3 | 1 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 0 | 2 | 0 | 0 | 1 | 4 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 4 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 6 | 14 | 21 | 13 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 8 | 14 | 14 | 18 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 4 | 19 | 21 | 10 | ||||||||||||
| COX1 (size: 1551 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 45 (8.72%)
Alanine (Ala, A)
n = 49 (9.5%)
Serine (Ser, S)
n = 30 (5.81%)
Threonine (Thr, T)
n = 34 (6.59%)
Cysteine (Cys, C)
n = 1 (0.19%)
Valine (Val, V)
n = 46 (8.91%)
Leucine (Leu, L)
n = 63 (12.21%)
Isoleucine (Ile, I)
n = 36 (6.98%)
Methionine (Met, M)
n = 23 (4.46%)
Proline (Pro, P)
n = 28 (5.43%)
Phenylalanine (Phe, F)
n = 42 (8.14%)
Tyrosine (Tyr, Y)
n = 18 (3.49%)
Tryptophan (Trp, W)
n = 17 (3.29%)
Aspartic acid (Asp, D)
n = 15 (2.91%)
Glutamic acid (Glu, E)
n = 11 (2.13%)
Asparagine (Asn, N)
n = 16 (3.1%)
Glutamine (Gln, Q)
n = 8 (1.55%)
Histidine (His, H)
n = 18 (3.49%)
Lysine (Lys, K)
n = 8 (1.55%)
Arginine (Arg, R)
n = 8 (1.55%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 28 | 8 | 14 | 15 | 11 | 16 | 4 | 14 | 5 | 3 | 10 | 9 | 22 | 5 | 19 | 23 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 9 | 0 | 1 | 12 | 20 | 16 | 1 | 11 | 10 | 14 | 10 | 7 | 5 | 16 | 0 | 10 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 6 | 15 | 3 | 5 | 5 | 16 | 0 | 1 | 3 | 8 | 10 | 1 | 3 | 4 | 12 | 5 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 13 | 7 | 4 | 9 | 6 | 8 | 0 | 2 | 2 | 3 | 1 | 0 | 0 | 1 | 0 | 16 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 166 | 108 | 121 | 122 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 75 | 137 | 95 | 210 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 44 | 144 | 183 | 146 | ||||||||||||
| COX2 (size: 691 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 9 (3.93%)
Alanine (Ala, A)
n = 17 (7.42%)
Serine (Ser, S)
n = 16 (6.99%)
Threonine (Thr, T)
n = 11 (4.8%)
Cysteine (Cys, C)
n = 2 (0.87%)
Valine (Val, V)
n = 22 (9.61%)
Leucine (Leu, L)
n = 27 (11.79%)
Isoleucine (Ile, I)
n = 16 (6.99%)
Methionine (Met, M)
n = 13 (5.68%)
Proline (Pro, P)
n = 14 (6.11%)
Phenylalanine (Phe, F)
n = 9 (3.93%)
Tyrosine (Tyr, Y)
n = 9 (3.93%)
Tryptophan (Trp, W)
n = 5 (2.18%)
Aspartic acid (Asp, D)
n = 13 (5.68%)
Glutamic acid (Glu, E)
n = 15 (6.55%)
Asparagine (Asn, N)
n = 4 (1.75%)
Glutamine (Gln, Q)
n = 8 (3.49%)
Histidine (His, H)
n = 10 (4.37%)
Lysine (Lys, K)
n = 4 (1.75%)
Arginine (Arg, R)
n = 6 (2.62%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 13 | 3 | 8 | 10 | 1 | 7 | 1 | 7 | 7 | 1 | 4 | 7 | 9 | 2 | 6 | 3 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 5 | 0 | 2 | 2 | 8 | 7 | 0 | 2 | 1 | 4 | 2 | 2 | 5 | 5 | 2 | 3 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 1 | 4 | 3 | 3 | 5 | 4 | 0 | 0 | 4 | 4 | 5 | 0 | 1 | 3 | 1 | 3 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 7 | 9 | 6 | 5 | 8 | 3 | 1 | 1 | 0 | 4 | 1 | 0 | 0 | 0 | 0 | 5 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 76 | 57 | 52 | 45 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 26 | 54 | 63 | 87 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 25 | 61 | 83 | 61 | ||||||||||||
| COX3 (size: 784 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 23 (8.85%)
Alanine (Ala, A)
n = 22 (8.46%)
Serine (Ser, S)
n = 14 (5.38%)
Threonine (Thr, T)
n = 22 (8.46%)
Cysteine (Cys, C)
n = 2 (0.77%)
Valine (Val, V)
n = 17 (6.54%)
Leucine (Leu, L)
n = 32 (12.31%)
Isoleucine (Ile, I)
n = 15 (5.77%)
Methionine (Met, M)
n = 8 (3.08%)
Proline (Pro, P)
n = 12 (4.62%)
Phenylalanine (Phe, F)
n = 24 (9.23%)
Tyrosine (Tyr, Y)
n = 11 (4.23%)
Tryptophan (Trp, W)
n = 11 (4.23%)
Aspartic acid (Asp, D)
n = 5 (1.92%)
Glutamic acid (Glu, E)
n = 10 (3.85%)
Asparagine (Asn, N)
n = 1 (0.38%)
Glutamine (Gln, Q)
n = 9 (3.46%)
Histidine (His, H)
n = 16 (6.15%)
Lysine (Lys, K)
n = 2 (0.77%)
Arginine (Arg, R)
n = 5 (1.92%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 9 | 6 | 5 | 8 | 2 | 7 | 5 | 7 | 9 | 0 | 3 | 2 | 8 | 4 | 12 | 12 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 3 | 2 | 0 | 3 | 11 | 8 | 0 | 2 | 8 | 6 | 7 | 4 | 4 | 4 | 0 | 4 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 5 | 7 | 6 | 4 | 2 | 4 | 1 | 0 | 3 | 3 | 8 | 1 | 3 | 1 | 0 | 6 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 10 | 9 | 1 | 2 | 3 | 1 | 1 | 1 | 1 | 2 | 1 | 0 | 0 | 0 | 0 | 10 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 77 | 64 | 51 | 69 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 44 | 67 | 54 | 96 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 33 | 77 | 87 | 64 | ||||||||||||
| CYTB (size: 1141 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 26 (6.86%)
Alanine (Ala, A)
n = 31 (8.18%)
Serine (Ser, S)
n = 23 (6.07%)
Threonine (Thr, T)
n = 26 (6.86%)
Cysteine (Cys, C)
n = 3 (0.79%)
Valine (Val, V)
n = 24 (6.33%)
Leucine (Leu, L)
n = 63 (16.62%)
Isoleucine (Ile, I)
n = 26 (6.86%)
Methionine (Met, M)
n = 12 (3.17%)
Proline (Pro, P)
n = 21 (5.54%)
Phenylalanine (Phe, F)
n = 29 (7.65%)
Tyrosine (Tyr, Y)
n = 15 (3.96%)
Tryptophan (Trp, W)
n = 12 (3.17%)
Aspartic acid (Asp, D)
n = 10 (2.64%)
Glutamic acid (Glu, E)
n = 6 (1.58%)
Asparagine (Asn, N)
n = 16 (4.22%)
Glutamine (Gln, Q)
n = 7 (1.85%)
Histidine (His, H)
n = 13 (3.43%)
Lysine (Lys, K)
n = 9 (2.37%)
Arginine (Arg, R)
n = 8 (2.11%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 11 | 15 | 9 | 8 | 14 | 16 | 10 | 11 | 6 | 1 | 6 | 8 | 7 | 3 | 8 | 21 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 3 | 2 | 1 | 6 | 10 | 13 | 2 | 9 | 5 | 11 | 1 | 5 | 7 | 6 | 3 | 3 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 15 | 7 | 1 | 3 | 9 | 7 | 2 | 0 | 2 | 6 | 9 | 4 | 4 | 8 | 8 | 4 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 9 | 1 | 5 | 3 | 7 | 7 | 2 | 2 | 0 | 3 | 3 | 0 | 0 | 0 | 0 | 8 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 97 | 97 | 91 | 95 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 51 | 99 | 76 | 154 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 44 | 140 | 112 | 84 | ||||||||||||
| ND1 (size: 975 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 19 (5.86%)
Alanine (Ala, A)
n = 33 (10.19%)
Serine (Ser, S)
n = 22 (6.79%)
Threonine (Thr, T)
n = 19 (5.86%)
Cysteine (Cys, C)
n = 0 (0%)
Valine (Val, V)
n = 24 (7.41%)
Leucine (Leu, L)
n = 61 (18.83%)
Isoleucine (Ile, I)
n = 24 (7.41%)
Methionine (Met, M)
n = 8 (2.47%)
Proline (Pro, P)
n = 24 (7.41%)
Phenylalanine (Phe, F)
n = 18 (5.56%)
Tyrosine (Tyr, Y)
n = 13 (4.01%)
Tryptophan (Trp, W)
n = 8 (2.47%)
Aspartic acid (Asp, D)
n = 3 (0.93%)
Glutamic acid (Glu, E)
n = 11 (3.4%)
Asparagine (Asn, N)
n = 10 (3.09%)
Glutamine (Gln, Q)
n = 7 (2.16%)
Histidine (His, H)
n = 5 (1.54%)
Lysine (Lys, K)
n = 7 (2.16%)
Arginine (Arg, R)
n = 8 (2.47%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 8 | 16 | 3 | 19 | 13 | 8 | 7 | 7 | 2 | 5 | 6 | 4 | 8 | 6 | 5 | 13 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 5 | 0 | 0 | 4 | 15 | 12 | 2 | 4 | 5 | 5 | 5 | 6 | 9 | 6 | 3 | 4 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 8 | 5 | 2 | 7 | 3 | 6 | 3 | 1 | 2 | 8 | 5 | 4 | 7 | 4 | 6 | 1 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 4 | 2 | 9 | 1 | 2 | 3 | 4 | 0 | 1 | 4 | 3 | 0 | 0 | 1 | 0 | 4 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 90 | 91 | 71 | 73 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 38 | 95 | 57 | 135 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 65 | 106 | 76 | 78 | ||||||||||||
| ND2 (size: 1045 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 19 (5.48%)
Alanine (Ala, A)
n = 43 (12.39%)
Serine (Ser, S)
n = 21 (6.05%)
Threonine (Thr, T)
n = 42 (12.1%)
Cysteine (Cys, C)
n = 1 (0.29%)
Valine (Val, V)
n = 20 (5.76%)
Leucine (Leu, L)
n = 68 (19.6%)
Isoleucine (Ile, I)
n = 17 (4.9%)
Methionine (Met, M)
n = 17 (4.9%)
Proline (Pro, P)
n = 19 (5.48%)
Phenylalanine (Phe, F)
n = 12 (3.46%)
Tyrosine (Tyr, Y)
n = 8 (2.31%)
Tryptophan (Trp, W)
n = 11 (3.17%)
Aspartic acid (Asp, D)
n = 3 (0.86%)
Glutamic acid (Glu, E)
n = 5 (1.44%)
Asparagine (Asn, N)
n = 8 (2.31%)
Glutamine (Gln, Q)
n = 13 (3.75%)
Histidine (His, H)
n = 8 (2.31%)
Lysine (Lys, K)
n = 9 (2.59%)
Arginine (Arg, R)
n = 4 (1.15%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 11 | 6 | 11 | 12 | 19 | 17 | 4 | 10 | 9 | 4 | 6 | 5 | 6 | 3 | 5 | 7 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 6 | 0 | 1 | 11 | 16 | 14 | 2 | 3 | 5 | 3 | 8 | 3 | 8 | 7 | 1 | 8 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 15 | 15 | 4 | 2 | 9 | 3 | 2 | 0 | 5 | 3 | 5 | 3 | 6 | 5 | 3 | 2 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 6 | 4 | 1 | 0 | 3 | 4 | 5 | 0 | 2 | 2 | 0 | 0 | 0 | 0 | 0 | 8 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 90 | 96 | 98 | 64 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 40 | 120 | 54 | 134 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 49 | 115 | 113 | 71 | ||||||||||||
| ND3 (size: 1045 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 19 (5.48%)
Alanine (Ala, A)
n = 43 (12.39%)
Serine (Ser, S)
n = 21 (6.05%)
Threonine (Thr, T)
n = 42 (12.1%)
Cysteine (Cys, C)
n = 1 (0.29%)
Valine (Val, V)
n = 20 (5.76%)
Leucine (Leu, L)
n = 68 (19.6%)
Isoleucine (Ile, I)
n = 17 (4.9%)
Methionine (Met, M)
n = 17 (4.9%)
Proline (Pro, P)
n = 19 (5.48%)
Phenylalanine (Phe, F)
n = 12 (3.46%)
Tyrosine (Tyr, Y)
n = 8 (2.31%)
Tryptophan (Trp, W)
n = 11 (3.17%)
Aspartic acid (Asp, D)
n = 3 (0.86%)
Glutamic acid (Glu, E)
n = 5 (1.44%)
Asparagine (Asn, N)
n = 8 (2.31%)
Glutamine (Gln, Q)
n = 13 (3.75%)
Histidine (His, H)
n = 8 (2.31%)
Lysine (Lys, K)
n = 9 (2.59%)
Arginine (Arg, R)
n = 4 (1.15%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 11 | 6 | 11 | 12 | 19 | 17 | 4 | 10 | 9 | 4 | 6 | 5 | 6 | 3 | 5 | 7 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 6 | 0 | 1 | 11 | 16 | 14 | 2 | 3 | 5 | 3 | 8 | 3 | 8 | 7 | 1 | 8 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 15 | 15 | 4 | 2 | 9 | 3 | 2 | 0 | 5 | 3 | 5 | 3 | 6 | 5 | 3 | 2 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 6 | 4 | 1 | 0 | 3 | 4 | 5 | 0 | 2 | 2 | 0 | 0 | 0 | 0 | 0 | 8 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 90 | 96 | 98 | 64 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 40 | 120 | 54 | 134 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 49 | 115 | 113 | 71 | ||||||||||||
| ND4 (size: 1382 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 27 (5.88%)
Alanine (Ala, A)
n = 38 (8.28%)
Serine (Ser, S)
n = 32 (6.97%)
Threonine (Thr, T)
n = 39 (8.5%)
Cysteine (Cys, C)
n = 5 (1.09%)
Valine (Val, V)
n = 22 (4.79%)
Leucine (Leu, L)
n = 84 (18.3%)
Isoleucine (Ile, I)
n = 38 (8.28%)
Methionine (Met, M)
n = 27 (5.88%)
Proline (Pro, P)
n = 28 (6.1%)
Phenylalanine (Phe, F)
n = 17 (3.7%)
Tyrosine (Tyr, Y)
n = 14 (3.05%)
Tryptophan (Trp, W)
n = 20 (4.36%)
Aspartic acid (Asp, D)
n = 4 (0.87%)
Glutamic acid (Glu, E)
n = 11 (2.4%)
Asparagine (Asn, N)
n = 9 (1.96%)
Glutamine (Gln, Q)
n = 12 (2.61%)
Histidine (His, H)
n = 12 (2.61%)
Lysine (Lys, K)
n = 10 (2.18%)
Arginine (Arg, R)
n = 11 (2.4%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 22 | 16 | 18 | 23 | 12 | 22 | 7 | 16 | 5 | 7 | 7 | 6 | 8 | 1 | 9 | 8 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 9 | 2 | 3 | 11 | 13 | 12 | 2 | 2 | 10 | 8 | 7 | 8 | 10 | 7 | 3 | 10 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 14 | 10 | 5 | 8 | 8 | 8 | 0 | 2 | 6 | 8 | 6 | 6 | 4 | 2 | 7 | 6 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 6 | 7 | 4 | 0 | 4 | 5 | 5 | 3 | 1 | 5 | 2 | 0 | 0 | 0 | 0 | 14 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 102 | 127 | 131 | 100 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 71 | 129 | 72 | 188 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 62 | 130 | 145 | 123 | ||||||||||||
| ND4L (size: 297 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 5 (5.1%)
Alanine (Ala, A)
n = 12 (12.24%)
Serine (Ser, S)
n = 9 (9.18%)
Threonine (Thr, T)
n = 10 (10.2%)
Cysteine (Cys, C)
n = 3 (3.06%)
Valine (Val, V)
n = 2 (2.04%)
Leucine (Leu, L)
n = 23 (23.47%)
Isoleucine (Ile, I)
n = 2 (2.04%)
Methionine (Met, M)
n = 5 (5.1%)
Proline (Pro, P)
n = 2 (2.04%)
Phenylalanine (Phe, F)
n = 8 (8.16%)
Tyrosine (Tyr, Y)
n = 0 (0%)
Tryptophan (Trp, W)
n = 1 (1.02%)
Aspartic acid (Asp, D)
n = 1 (1.02%)
Glutamic acid (Glu, E)
n = 3 (3.06%)
Asparagine (Asn, N)
n = 2 (2.04%)
Glutamine (Gln, Q)
n = 3 (3.06%)
Histidine (His, H)
n = 5 (5.1%)
Lysine (Lys, K)
n = 0 (0%)
Arginine (Arg, R)
n = 2 (2.04%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 1 | 1 | 3 | 3 | 3 | 10 | 2 | 3 | 2 | 1 | 0 | 0 | 2 | 0 | 5 | 3 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 2 | 2 | 1 | 2 | 4 | 4 | 2 | 2 | 1 | 2 | 0 | 0 | 1 | 1 | 0 | 1 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 4 | 5 | 0 | 2 | 2 | 1 | 1 | 1 | 2 | 0 | 0 | 0 | 2 | 1 | 1 | 2 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 3 | 3 | 0 | 1 | 0 | 0 | 0 | 1 | 1 | 0 | 0 | 0 | 0 | 1 | 0 | 1 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 23 | 30 | 22 | 24 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 14 | 30 | 15 | 40 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 10 | 27 | 38 | 24 | ||||||||||||
| ND5 (size: 1836 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 31 (5.07%)
Alanine (Ala, A)
n = 56 (9.17%)
Serine (Ser, S)
n = 49 (8.02%)
Threonine (Thr, T)
n = 54 (8.84%)
Cysteine (Cys, C)
n = 6 (0.98%)
Valine (Val, V)
n = 31 (5.07%)
Leucine (Leu, L)
n = 95 (15.55%)
Isoleucine (Ile, I)
n = 47 (7.69%)
Methionine (Met, M)
n = 31 (5.07%)
Proline (Pro, P)
n = 27 (4.42%)
Phenylalanine (Phe, F)
n = 36 (5.89%)
Tyrosine (Tyr, Y)
n = 13 (2.13%)
Tryptophan (Trp, W)
n = 14 (2.29%)
Aspartic acid (Asp, D)
n = 14 (2.29%)
Glutamic acid (Glu, E)
n = 12 (1.96%)
Asparagine (Asn, N)
n = 29 (4.75%)
Glutamine (Gln, Q)
n = 19 (3.11%)
Histidine (His, H)
n = 13 (2.13%)
Lysine (Lys, K)
n = 23 (3.76%)
Arginine (Arg, R)
n = 11 (1.8%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 35 | 12 | 18 | 30 | 17 | 19 | 8 | 15 | 15 | 4 | 9 | 9 | 12 | 1 | 14 | 22 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 13 | 1 | 5 | 6 | 23 | 20 | 7 | 4 | 11 | 10 | 6 | 8 | 7 | 8 | 4 | 15 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 18 | 18 | 3 | 8 | 11 | 11 | 4 | 1 | 14 | 4 | 9 | 4 | 6 | 14 | 15 | 3 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 10 | 4 | 8 | 4 | 10 | 13 | 10 | 0 | 2 | 5 | 4 | 0 | 0 | 1 | 0 | 10 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 144 | 144 | 199 | 125 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 77 | 171 | 124 | 240 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 82 | 195 | 179 | 156 | ||||||||||||
| ND6 (size: 522 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 25 (14.45%)
Alanine (Ala, A)
n = 19 (10.98%)
Serine (Ser, S)
n = 11 (6.36%)
Threonine (Thr, T)
n = 5 (2.89%)
Cysteine (Cys, C)
n = 2 (1.16%)
Valine (Val, V)
n = 22 (12.72%)
Leucine (Leu, L)
n = 31 (17.92%)
Isoleucine (Ile, I)
n = 6 (3.47%)
Methionine (Met, M)
n = 9 (5.2%)
Proline (Pro, P)
n = 5 (2.89%)
Phenylalanine (Phe, F)
n = 10 (5.78%)
Tyrosine (Tyr, Y)
n = 7 (4.05%)
Tryptophan (Trp, W)
n = 5 (2.89%)
Aspartic acid (Asp, D)
n = 3 (1.73%)
Glutamic acid (Glu, E)
n = 5 (2.89%)
Asparagine (Asn, N)
n = 1 (0.58%)
Glutamine (Gln, Q)
n = 1 (0.58%)
Histidine (His, H)
n = 0 (0%)
Lysine (Lys, K)
n = 1 (0.58%)
Arginine (Arg, R)
n = 5 (2.89%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 4 | 2 | 7 | 4 | 0 | 10 | 0 | 10 | 0 | 1 | 8 | 2 | 4 | 8 | 6 | 4 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 2 | 2 | 0 | 7 | 4 | 4 | 4 | 5 | 2 | 5 | 13 | 3 | 1 | 1 | 0 | 2 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 1 | 1 | 1 | 4 | 2 | 2 | 0 | 3 | 0 | 3 | 4 | 3 | 7 | 0 | 1 | 0 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 0 | 3 | 2 | 2 | 1 | 1 | 0 | 2 | 0 | 2 | 1 | 0 | 0 | 1 | 0 | 2 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 74 | 25 | 25 | 50 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 40 | 37 | 19 | 78 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 42 | 24 | 53 | 55 | ||||||||||||
| Total protein-coding genes (size: 11419 bases) | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Amino acid sequence: | |||||||||||||||
| Amino acid frequencies:
Glycine (Gly, G)
n = 246 (6.47%)
Alanine (Ala, A)
n = 349 (9.18%)
Serine (Ser, S)
n = 247 (6.49%)
Threonine (Thr, T)
n = 297 (7.81%)
Cysteine (Cys, C)
n = 26 (0.68%)
Valine (Val, V)
n = 250 (6.57%)
Leucine (Leu, L)
n = 625 (16.43%)
Isoleucine (Ile, I)
n = 261 (6.86%)
Methionine (Met, M)
n = 169 (4.44%)
Proline (Pro, P)
n = 214 (5.63%)
Phenylalanine (Phe, F)
n = 233 (6.13%)
Tyrosine (Tyr, Y)
n = 113 (2.97%)
Tryptophan (Trp, W)
n = 119 (3.13%)
Aspartic acid (Asp, D)
n = 77 (2.02%)
Glutamic acid (Glu, E)
n = 101 (2.66%)
Asparagine (Asn, N)
n = 111 (2.92%)
Glutamine (Gln, Q)
n = 99 (2.6%)
Histidine (His, H)
n = 105 (2.76%)
Lysine (Lys, K)
n = 79 (2.08%)
Arginine (Arg, R)
n = 76 (2.0%) |
|||||||||||||||
| Codon statistics: | |||||||||||||||
| AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
| 165 | 96 | 108 | 147 | 105 | 154 | 50 | 123 | 70 | 29 | 66 | 55 | 96 | 33 | 101 | 132 |
| AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
| 61 | 12 | 14 | 70 | 132 | 124 | 23 | 46 | 60 | 76 | 64 | 51 | 67 | 76 | 20 | 68 |
| ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
| 97 | 98 | 34 | 50 | 57 | 67 | 15 | 11 | 47 | 50 | 63 | 29 | 46 | 47 | 64 | 34 |
| CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
| 71 | 58 | 43 | 30 | 47 | 50 | 29 | 12 | 12 | 35 | 17 | 0 | 0 | 7 | 0 | 90 |
| Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
| 1023 | 950 | 975 | 856 | ||||||||||||
| Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
| 525 | 1049 | 692 | 1538 | ||||||||||||
| Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
| 493 | 1119 | 1232 | 960 | ||||||||||||
>NC_008643.1 Cyprinella lutrensis mitochondrion, complete genome GCTAGCGTAGCTTAATTCAAAGCATAACACTGAAGATGTTAAGATGGGCCCTAGAAAGCTCCGCATGCAC AAAGGCATGGTCCCGACCTTACCATCAGCTCTAGCCCAACTTACACATGCAAGTCTCCGCAACCCCGTGA GTAAGCCCTTAATCCCCCGCCCGGGGACGAGGAGCAGGCATCAGGCACAAACCTTTAGCCCAAGACGCCG GGCCTAGCCACACCCCCAAGGGAATTCAGCAGTGATAAATATTAAGCTATAAGTGAAAACTTGACTTAAT TAGGGCTAAGAGGGCCGGTAAAACTCGTGCCAGCCACCGCGGTTAGACGAGAGGCCCTAGTTGATAGAAC AACGGCGTAAAGGGTGGTTAAGGATAGCGAGATAATAAAGTCGAATGGCCCTTTGGCTGTCATACGCTTC TAGGAGTCTGAAGCCCAATATACGAAAGTAACTTTAATAACGTCCACCTGACCCCACGAAAACTGAGAAA CAAACTGGGATTAGATACCCCACTATGCTCAGTTGTAAACCCAGACGTCTAACTACAACAGACGTCCGCC CGGGTACTACGAGCATTAGCTTGAAACCCAAAGGACCTGACGGTGCCTCAGACCCCCCTAGAGGAGCCTG TTCTAGAACCGATAACCCCCGTTAAACCTCACCGCTTCTAGCCATCCCAGCCTATATACCGCCGTCGTCA GCTTACCCTGTGAAGGAGTAATAGTAAGCGAAATGGGCACAACCCAAAACGTCAGGTCGAGGTGTAGCGT ACGAAGCGGGAAGAAATGGGCTACATTTTCTATAGTAGAATACTACGGATATGCAACATGAAATAGTGCT TGAAGGAGGATTTAGTAGTAAAGAGGAAGCAACGTGTCCTTTTGAACCCGGCTCTGAGGCGCGTACACAC CGCCCGTCACTCTCCCCTGTCAAAATGCAATCAAGTTACCTAACACCAAAGCTCTGACGAGGGGAGGCAA GTCGTAACATGGTAAGTGTACCGGAAGGTGCACTTGGATAAAATTCAGGGTGTGGCTGAGCTAGTTAAGC ATCTCACTTACACCGAGAAGACATCCATGCAAATTGGGTCACCCTGAGCCAACTAGCTAGCTTAATTACT CAGATAATTTAACAATATTTATAACATACACAAGACTTAACCTTACAAATTAAACCATTTTTATACCTAA GTATGGGAGACAGAAAAGGTTCCACTAAGCAATAGAGAAAGTACCGCAAGGGAAAGCTGAAAGAGAAATG AAATAACCCATACAAGCGCTGAATAACAAAGACTAAACCTTGTACCTTTTGCATCATGATTTAGCCAGTA CCATCAAGCAAGGAGATCTATAGTTTGGTACCCCGAAACCAGGTGAGCTACCCCGAGACAGCCTAGAATT TAGGGCTAACCCGTCTCTGTGGCAAAAGAGTGGGAAGAGCTCCGGGTAGAAGTGACAGACCTACCGAACC TGGTGATAGCTGGTTGCCTAAGAAATGAATAGAAGTTCAGCCTCGCACACCCTTAATCGAAAGACACACT ATCAAGAAACTTATGGAAACATACGAGAGTTAGTTGAAGGGGGTACAGCCCCTTTAACAAAGGATACAAC CTTAGCAGGAGGATAAAGATCATAATAAGTAAAATATACTGTTCTAGTGGGCCTGAAAGCAGCCATCTAA GCAGAAAGCGTTAAAGCTCGGACAGAAAGGCATTTATTATCCCGATAGAAAAATCTTACTCCCCTAGTTC TATTAGGCCGACCCATGCCCACATGGGTGAGATTATGCTAAAATGAGTAACAAGAAGACCTCATCTTCTC CCGCCGCAGGTGTAAACCAGATCGGACCCACCACTGGAATTTAACGAGCCCAACCAAAGAGGGCATTGTG AATAATAAAAACCTCAAGAAGAACTCACAACTAAATGATCGTTAACCCTACACTGGAGCGGCATACCAGG GGAAAGACTAAAAGAGGGGGAAGGAACTCGGCAAACACAAGCCTCGCCTGTTTACCAAAAACATCGCCTC CTGCAACATAGAGTATAGGAGGTCCAGCCTGCCCAGTGACTACGGGTTCAACGGCCGCGGTATATTGACC GTGCAAAGGTAGCGCAATCACTTGTCTTTTAAATAAAGACCTGTATGAATGGCTAGACGAGGGCTTAACT GTCTCCCCCCTCCAGTCAGTGAAATTGATCTATCCGTGCAGAAGCGGGTATAATTCTACAAGACGAGAAG ACCCTTTGGAGCTTAAGGTACAAGATTCAATCACGTCAAACAACTTGATGAAAAGCCAGAACTTAGTGAC TATGAAACTTTACCTTCGGTTGGGGCGACCACGGAGGAAAAGCAAGCCTCCGAGTGGACTGGGCCAAAAC CCTAAAGCCAAGAGGAACATCTTTAAGCCGCAGAACATCTGACCAATAATGATCCGGCCCAAGAGGCCGA TCAACGAACCAAGTTACCCTAGGGATAACAGCGCAATCCTCTCCCAGAGCCCATATCGACGAGGGGGTTT ACGACCTCGATGTTGGATCAGGACATCCTGGTGGTGCAGCCGCTATTAAGGGTTCGTTTGTTCAACGATT AAAGTCCTACGTGATCTGAGTTCAGACCGGAGCAATCCAGGTCAGTTTCTATCTGTAACGCTATTTTTCC TAGTACGAAAGGATCGGAAAAGAGGGGCCCATACTCAACGCATGCCCCACCCCTAATTCATGAAAACAAA TAAATTAAATAAGGGAGGGCCTAGACCCCTGCCGCCCAAGATAAGGGCATACTGGGGTGGCAGAGCGTGG TAAATTGCATAAGGCCTAAGCCCTTAAAACCAGAGGTTCAAATCCTCTTCCCAGTTTATGCTTCACACCT TGATGATTCACCTAATTAACCCGCTCGCTTATATTGTCCCCGTCCTGTTGGCCGTGGCATTCTTAACCTT GCTTGAGCGGAAAGTATTAGGGTATATGCAATTCCGAAAAGGACCTAACGTGGTTGGACCCTACGGCTTA CTTCAACCTATCGCCGACGGGGTTAAGTTATTTATCAAAGAGCCTGTTCGCCCCTCCACATCATCCCCAT TCTTGTTTCTTGCTACCCCTATCCTCGCACTCACCCTCGCCCTCACCCTTTGGGCCCCTATCCCTATACC CCACCCAGTAATTAACCTTAATTTAGGTGTTCTATTTATCTTGGCACTCTCAAGCCTTGCAGTCTATTCT ATTCTTGGTTCGGGCTGAGCATCAAATTCAAAGTATGCACTTATTGGGGCCCTGCGGGCAGTTGCCCAGA CAATTTCATATGAAGTAAGCCTTGGACTTATCATTCTTTCTGTAATCATCTTTTCTGGGGGTTATACTCT ACAGACTTTCAGTACAGCCCAGGAGGCCGTATGATTAATCATCCCGGCCTGACCACTGGCCGCAATGTGG TACATCTCTACTCTTGCGGAGACCAATCGAGCTCCCTTCGACTTAACGGAGGGTGAGTCGGAGCTTGTCT CAGGCTTCAACGTAGAGTACGCAGGGGGCCCATTCGCCTTGTTCTTCCTCGCCGAGTACGCTAATATCCT CCTAATGAACACCCTCTCTGCAGTGCTATTCCTGGGAACATCGTACTTCCCCACCATCCCCGAACTGACT ACAGTTGGACTCATAATCAAGGCCGCACTTCTATCTGTGGTATTCCTGTGGATCCGGGCCTCTTATCCCC GATTCCGATATGATCAGCTCATACACCTTGTATGGAAGAACTTTCTTCCGCTTACGCTAGCCCTCGTGTT GTGACATGTGTCCCTCCCAATCGCACTAGCGGGCCTTCCCCCACAGCTGTAACCCAGGAACTGTGCCCGA GTGCCCAGGGACCACTTTGATAGAGTGGCTTACAGGGGTTAGAGTCCCCTCAGTTCTTAGAAAGAAGGGG ATCGAACCCATACTCAAGAGATCAAAACTCTTGGTGCTTCCTATACACCACTTTCTACGATGGGGTCAGC TAAACAAGCTTTCGGGCCCATACCCCGAACATGACGGTTAAAATCCCTCCTCCATCAATGAACCCTTACG TACTAGCTACGCTTCTCTCCAGCCTCGGCCTAGGGACTACCCTCACCTTCGCCAGCTCACACTGATTGCT AGCCTGAATAGGGCTTGAAATCAATACATTAGCAATTGTTCCACTAATAGCCCAACACCATCACCCTCGC GCAGTAGAGGCTACTACGAAGTACTTCCTTATTCAGGCCACGGCGGCCGCTGTGATTCTCTTTGCAAGCA CAACTAATGCATGGATCACAGGGGAATGAAATATAGTAAATATGTCGGACCCAGTCGCTACAACAATAAT CCTTGCCGCACTTTCCCTCAAAGTTGGACTAGCACCAATACATTTTTGAATACCTGAAGTACTACAGGGG TTAGACTTATTAACAGGTCTAATTCTATCCACCTGACAGAAGCTCGCCCCATTCGCCCTTATTATTCAAA CATCCCAAGCATTCGACCCACTCCTCCTTACAGCCCTAGGTCTCACATCTGTCTTGGTGGGAGGGTGAGG GGGCTTGAACCAAACCCAACTACGAAAGATCTTGGCTTATTCCTCAATCGCGCACATGGGTTGAATAATT ATTATTCTCCAACACGCCCCCCACCTCACCTTCCTCGCACTACTGATGTATATCTTAATAACATCCGCTG CATTCCTCACACTAAAGCTCTCATATGCTACAAAAGTTGGGGCCTTAGCAACCACATGATCCAAAAGCCC GCTACTGACGGCCACAGCCGCCCTCGTATTGTTGTCCCTCGGAGGCCTCCCCCCACTTACCGGGTTTATA CCAAAATGGTTTATTCTGCAAGAACTAGCAAAGCAGGGCCTCCCCCTTACTGCAACTGTAATGGCTCTTG CTGCCCTAGTCAGCCTATACTTTTACTTACGACTTTGCTACGCAATAACCCTTACTGTCTCCCCCAACAC CGCCACCTCGACTACCCCCTGGCGCACTCAAACAAATCAAGTCTCTACCCCCCTAACCTTATTCACCGTG ATGGCTCTGGGCCTCTTACCCGTTGCTCCCACCGTTATAGCATTAGTTATTTAGGGGCTTAGGATAGCAT TAGACCGGGAGCCTTCAAAGCTCTAAGCAGAAGTGAAAATCTTCTAGCCCCTGATAAGACCTACAAGAGT TTATCTTGCATCTTCTGAATGCAAATCAAATGTTTTTGTTAAACTAAGGCCTTTCTAGATGGGAAGGCCT CGATCCTACAAACTCTTAGTTAACAGCTAAGCGCTCAAGCCAGCGAGCATCCATCTACTTTCCCGCCATT TGCCGGGTAAGGCGGGAAAGCCCCGGCAGGGTATTAATCTGCGACTCTGGATTTGCAATCCAACGTGGTC ACTCCACCACGGGGCTTGATAGGAAGAGGACTTAAACCTCTGTCTTCGGGGCTACAACCCACCGCCTAAA CACTCGGCTACCCTACCTGTGGCAATTACACGCTGATTCTTTTCTACAAATCACAAAGATATTGGTACCC TTTATTTAGTATTTGGTGCCTGAGCTGGAATAGTAGGAACCGCTTTAAGCCTCCTTATTCGAGCCGAATT GAGTCAACCTGGCTCACTTCTAGGCGATGATCAAATCTATAATGTAATTGTTACTGCTCACGCCTTTGTA ATAATTTTCTTTATAGTAATACCAATTCTTATCGGGGGGTTCGGGAACTGGCTTGTACCTCTAATGATCG GGGCACCCGATATAGCATTCCCACGAATGAACAACATAAGCTTCTGACTTCTACCCCCATCATTCCTCTT ATTACTAGCTTCCTCTGGTGTTGAAGCTGGTGCCGGAACTGGATGAACTGTATACCCCCCACTTGCAGGT AATCTCGCCCACGCAGGAGCATCAGTAGATCTCACGATCTTCTCTCTACATCTAGCAGGTGTATCCTCAA TTCTAGGGGCAGTTAACTTCATTACTACAATTATTAACATAAAACCCCCAGCAATCTCTCAGTATCAGAC ACCTTTGTTTGTATGAGCCGTACTTGTAACCGCCGTACTTCTGCTCCTATCACTACCTGTGTTAGCTGCC GGAATTACTATACTTCTTACAGATCGTAACCTCAACACCACATTCTTTGACCCAGCAGGAGGGGGTGATC CTATTTTATACCAACACTTATTTTGATTCTTCGGTCACCCCGAGGTTTACATTCTTATTTTACCAGGGTT TGGAATCATTTCACACGTTGTAGCCTATTACGCAGGTAAAAAAGAGCCATTTGGCTACATAGGGATAGTT TGAGCCATGATGGCCATCGGCCTCCTAGGCTTTATTGTCTGAGCCCATCACATGTTTACTGTCGGAATGG ATGTAGACACCCGCGCCTACTTTACATCTGCAACAATAATTATTGCCATTCCAACTGGTGTAAAAGTATT TAGCTGACTTGCCACGCTCCACGGAGGCTCAATTAAATGAGAAACTCCTCTACTATGAGCCCTAGGGTTT ATTTTCCTGTTCACTGTTGGAGGCCTGACGGGGATTGTCCTTGCTAACTCCTCACTTGACATTGTCCTCC ACGACACATATTATGTCGTTGCTCACTTCCATTATGTCCTATCAATAGGAGCTGTCTTCGCTATTATAGC AGCATTTGTTCACTGATTCCCACTATTTTCAGGATACACCCTGAACGACACTTGAACAAAAATTCACTTT GCTGTAATGTTCATTGGTGTAAACCTCACATTCTTCCCACAGCATTTCTTAGGCTTAGCAGGAATGCCAC GACGGTATTCAGACTACCCAGATGCCTACGCTTTATGAAACACAGTGTCATCCATCGGCTCACTCGTCTC ATTGGTGGCGGTAATTATGTTCTTATTTATTTTATGAGAAGCCTTCGCCGCCAAACGTGAAGTGTCCTCA GTAGAGCTAACAATAACAAATGTAGAATGATTACATGGCTGCCCTCCACCATACCACACATTCGAGGAAC CAGCATTTGTCCAAGTTCAATCAAACTAACGAGAAAGGGAGGAATTGAACCCCCATGTACTGGTTTCAAG CCAGTCACATAACCACTCTGTCACTTTCTTCTGGAGACATTAGTAAATATGGATATTACATCACTTTGTC AAGGTGAAGTTGCAGGTTAAACTCCTGCATGTCTTAGGTTTCATGGCACACCCCGCCCAGCTTGGATTCC AAGACGCAGCATCACCCGTCATGGAAGAGCTTCTTCACTTTCACGACCACGCCCTAATGATTGTGTTTCT AATTAGCACAATAGTACTCTATATTATTGTCGCAATAGTTTCTACTAAACTTACTAATAAGTACATCCTA GACTCCCAAGAAATCGAGATTGTGTGAACAGTCTTACCAGCAGTTATTCTGGTACTAATTGCTCTTCCCT CCCTTCGAATTTTATATCTTATAGATGAGGTTAATGACCCCCACTTAACGATTAAAGCAATAGGACATCA ATGATATTGAAGCTACGAGTACACGGACTACGAAGATCTAGGATTTGACTCATATATAGTCCCCACCCAA GATCTTACGCCAGGGCAATTTCGACTTTTAGAAACAGATCATCGAATAGTAGTCCCGATAGAATCACCAA TCCGTGTCCTAGTATCCGCTGAGGACGTATTGCACTCCTGAGCCATTCCATCTCTTGGTGTAAAAATAGA TGCAGTACCTGGGCGACTAAATCAAACTGCCTTTATTGCCTCACGGCCAGGTGTATTCTACGGACAATGC TCTGAAATTTGCGGCGCCAACCACAGCTTTATGCCTATTGTAGTCGAAGCCGTTCCGTTAGAACATTTCG AGAGCTGATCCACATTAATGTTAGAAGACGCCTCACTAGGAAGCTAATTACTGGACAAAGCGTTGGCCTT TTAAGCCAAAGTTTGGTGCCTACCGACCACCCCTAGTGACATGCCCCAACTCAACCCTAGCCCCTGATTT GAAATTCTAGTATTCTCATGGCTTATCATTATCACCTTCATCCCAACTAAAGTTTTAGACTTCTTAACGC CCAATAAACCAGCCCCGAGTGAAATAAAACATAAAAGCAACCCCTGAAACTGACCATGATAACGAGCTTC TTCGACCAATTTGCAAGCCCCTCTTTTCTAGGAATTCCACTTATTGCTATTGCAATTGCACTCCCATGGG TATTATTTCCGACCCCATCATCTCGCTGAATAAACAACCGACTCACCACACTTCAGGCATGATTTATTAA CCGCTTTACTAATCAATTATTGATACCCTTAAACACAGGGGGACATAAATGAGCGCTAATATTCACCTCT TTAATATTATTCCTTATTACTATTAATATACTAGGACTACTACCATATACTTTCACGCCGACAACACAAT TGTCATTAAATATAGGGCTCGCCGTACCACTATGACTTGCAACAGTTATTATCGGGATGCGAAATCAACC AACAGTTGCTCTTGGCCACCTATTACCTGAAGGGACCCCTATTCCTTTAATCCCCGTACTAATTATCATC GAGACAATTAGCCTATTTATTCGACCATTGGCCTTAGGGGTCCGACTCACAGCCAACTTAACTGCAGGTC ACCTTCTTATTCAACTCATCGCTACGGCTGTATTTGTTCTTCTACCTCTAATACCCACTGTAGCATTCCT TACGGCTGCAGTTCTCTTCCTTTTAACTCTTCTAGAGGTTGCAGTAGCAATAATCCAAGCCTACGTCTTT GTATTACTCTTAAGCTTATACCTACAAGAAAACGTTTAATGGCCCACCAAGCACATGCATATCATATGGT TGATCCTAGCCCATGACCACTAACCGGAGCCATCGGTGCCTTATTAATGACATCTGGCCTAGCAATCTGG TTTCACTTCCACTCCGTAACACTAATAACCCTTGGGTTGATTTTATTACTTCTTACGATATTCCAATGAT GACGTGATGTAATTCGAGAAGGGACCTTTCAAGGCCACCACACGCCCCCAGTGCAAAAGGGGCTGCGATA CGGAATAATCCTGTTTATTACTTCTGAAGTCTTCTTTTTCCTAGGCTTCTTCTGAGCCTTCTACCACTCG AGCCTGGCCCCAACACCCGAGCTAGGGGGGTGTTGACCCCCTACTGGCATTACTACGTTGGACCCCTTTG AAGTGCCTCTGCTCAATACAGCCGTATTGTTAGCATCTGGGGTAACAGTCACGTGAGCTCACCACAGCAT TATAGAAGGTGAACGGAAACAAGCTATTCAATCTCTTGCACTTACGATTCTGCTAGGATTCTACTTCACT GCCCTTCAAGCAATAGAATACTATGAAGCACCTTTTACGATCGCAGACGGAGTTTACGGCTCAACATTCT TTGTAGCCACCGGATTTCATGGGCTACATGTAATTATTGGCTCAACCTTCTTAGCCGTGTGTCTTCTCCG CCAAATCCAATACCACTTTACATCCGAACATCATTTTGGCTTTGAAGCCGCTGCCTGATACTGACACTTT GTTGACGTAGTAGGATTATTCCTTTACGTGTCAATCTATTGATGAGGCTCATATCTTTCTAGTATTAAAG TTAGTACAAGTGACTTCCAATCATTTAGTCTTGGTTAAACCCCAAGGAAAGATAATGAACTTAATTACAA CGATTCTAATTATTACCATAGCCCTATCATCGATTCTAGCAATTGTATCTTTCTGGTTACCACAAATAAC CCCCGATGCAGAGAAGCTCTCGCCCTATGAATGTGGATTCGACCCATTAGGATCAGCCCGACTACCATTC TCCCTGCGGTTCTTTTTAGTAGCAATTCTATTCCTTTTATTTGATCTAGAAATCGCCCTCCTCCTCCCAT TACCGTGAGGTGATCAACTTCACAGTCCAACCGGAACATTCTTTTGAGCTACCACAGTCCTGATCCTTTT AACCCTCGGACTAATTTATGAATGAACTCAGGGAGGCCTAGAATGAGCAGAATAGAGGGCTAGTCTAAAC AAGACCTCTGATTTCGGCTCAGAAAATCGTGGTTTAAGTCCACGGCCCCCTTATGACACCAGTACACTTC AGCTTTACCTCAGCATTTATTTTGGGACTTATAGGACTAGCATTTCATCGTACCCATCTGCTCTCCGCGC TACTATGTTTGGAAGGCATGATATTATCGCTATTCATCGCGCTAGCCCTATGAACATTACAGTTTGAATC CACAAGCTTCTCTACCGCCCCCATACTATTACTAGCTTTTTCTGCCTGTGAAGCAAGTACAGGTCTTGCA CTCCTGGTAGCCACAGCTCGCACCCACGGTACTGATCACCTACAAAACCTTAATCTCCTACAATGCTAAA AGTTTTAGTCCCCACGATTATAATATTTCCAACGATCTGACTGACCTCTCCTAAGTGGTTATGGACAGCA ACCGCCACTCATGGGCTCTTAATTGCCTTGACAAGCCTCACGTGATTTAGCTGAACCTCAGAAGCTGGGT GGGCTTCATCCAACACCTATTTAGCCACTGACCCCCTATCCACACCCCTCTTAGTTCTGACATGTTGACT CCTTCCCTTAATAATTTTGGCTAGCCAGAACCACATCAACCCTGAACCCATTGTCCGTCAGCGACTTTAC ATCACACTTCTTGCCTCATTGCAAACTTTCCTAATCATAGCTTTTGGCGCCACCGAAATCATTATGTTCT ACATCATATTTGAAGCCACTCTCATTCCTACCCTTGTAATTATTACCCGTTGAGGAAATCAAACCGAACG CCTGAACGCAGGGACCTATTTCTTATTTTATACGCTAGCCGGGTCCCTTCCCCTCTTAGTAGCCTTACTC TTACTACAGCAATCTGAAGGAACTCTGTCCCTATTAATTATCCAGTATTCACCTCCCACACTAATAAGTT CCTGAAGTCATAAAATCTGATGGGCAGGCTGCCTAATCGCCTTCCTAGTCAAAATACCACTCTATGGTGT TCACCTTTGGTTACCTAAGGCACATGTAGAGGCCCCCGTTGCAGGCTCTATGGTCCTAGCAGCTATTCTA CTTAAGCTTGGAGGATATGGCATGATGCGGATAATAATAATGCTAGACCCGCTCTCTAAAGACCTAATCT ACCCATTTATTATTCTAGCGCTTTGAGGCATTATCATAACTGGCTCAATTTGCCTACGACAAACTGACCT TAAGTCACTAATTGCTTACTCCTCTGTAAGCCACATAGGCCTTGTAGCAGGGGGAATTTTAATCCAAACC CCCTGAGGCTTTACAGGAGCAATTATCCTTATAATTGCCCACGGCCTAGTGTCCTCTATACTATTCTGCT TAGCTAACACGGCTTATGAGCGAACCCATAGCCGGACTATAGTTCTTGCCCGAGGGCTGCAGGTAATTTT TCCATTAGCAGCAGTCTGATGATTCATCGCAAACCTAGCTAACCTAGCTCTTCCCCCACTTCCTAATCTG ATAGGAGAACTTATGATTATCACAACCCTCTTCAGCTGATCCCCTTGGACCATCGCACTTACCGGACTTG GTACATTAGTTACTGCGGCCTACTCTCTCTATATGTTTCTGATATCTCAGCGTGGCCCGACACCACAGCA TGTCATTAAACTTTCACCTTTCCACACTCGAGAGCATCTATTGATGGCTCTTCACCTTGTTCCGGTAATT CTCCTAGTATCAAAGCCAGAGCTTATATGAGGGTGATGTTACTAGTAAGTATAGTTTAAGTAAAACATCA GATTGTGATTCTGAAAACAGGGGTTAAAACCCCCTTACTCACCAAAGGAGGATAAGAATCAGTAAGTGCT GCTAATACTTATGCCCCGAGGTTAAATTCCTCGGCTTCTTTACGCTTCTGAAGGATAACAGCTCATCCGT TGGTCTTAGGAACCAAAAACCCTTGGTGCAAATCCAAGCGGAAGCTATGACCTCAACAGCCCTAGTCATA TCCACCTCATTCCTTCTAATCATTACAATCCTTATCTTGCCCTTGCTTATAACACTAAGCCCAAGCCCGC AAGAGCCTAACTGAGCTGATAAATATGTAAAGAATGCCGTTAGCGCTGCATTCTTTGTAAGCCTAGTACC TCTCCTGCTGTACCTTAATCAGGGGGCAGAAAATATTACTACAAGCTGGCAGTGAATAAACACACAGATA TTCGACACTAATATTAGCTTTAAATTTGATCATTACTCCTTAATCTTCACTCCTATTGCCCTCTTCGTTA CCTGGTCTATTTTAGAGTTTGCACTATGATACATACACTCTGACCCCAACATAAACCGATTCTTTAAATA CTTACTACTGTTTTTAGTAGCCATAATCATTCTTGTTACAGCAAATAATTTATTTCAATTATTCATTGGA TGAGAAGGAGTCGGTATTATATCTTTCCTGCTCATTGGTTGATGGCACGGCCGAGCAGACGCCAATACCG CAAGCCTCCAAGCAGTAATTTATAACCGGGTGGGGGATATTGGACTAATCCTAGCCATAGCCTGATTTGC TATAAATATGAACTCTTGAGAGATGCAACAGATCTTCGCTCTCTCCAAGAACTACGACATGACAACCCCC TTGGTTGCACTTGTCCTTGCGGCGGCAGGAAAATCGGCCCAACTTGGCCTGCACCCATGGCTCCCGTCAG CCATAGAGGGCCCGACGCCGGTATCAGCGCTACTCCACTCCAGCACCATAGTAGTTGCGGGTATCTTTCT ATTAATTCGCCTACATCCACTTATAGAGAATAATCAACTAGTATTGTCCGGCTGCTTATGCTTAGGGGCA CTTACTACCCTATATACAGCCACCTGCGCACTAACCCAAAATGACATCAAGAAAATTATTGCCTTCTCCA CATCGAGTCAACTTGGCCTTATGATGGTTACGATTGGATTAAACCAACCCCAATTGGCATTCCTCCATAT TTGTACACACGCATTTTTCAAGGCCATGCTCTTCCTTTGCTCGGGCTCTATTATTCACAGCCTGAACGAC GAGCAAGACATTCGGAAGATGGGTGGCCTCCACAAACTTCTACCTACTACCTCAACCTGCCTTACAATTG GGAGCCTGGCACTAGCAGGCACTCCTTTCCTTGCCGGATTCTTTTCAAAAGACGCCATTATTGAAGCCCT TAACACTTCCTACCTGAACGCCTGAGCCCTTGTCCTTACACTTCTTGCCACATCCTTCACTGCGGTCTAC AGCTTCCGGGTTGTCTACTTTGTTACTATGGGATCTCCACGATTCCTTTCATTGTCCCCCATTAATGAGG ATAATTCACTCATAATTCAACCTGTCAAACGACTTGCCTGAGGAAGCATTGTTGCGGGGCTTATTATTAC ATCCAACTTCCTCCCAATGAAAACGCCAGTAATAACCATGCCCACCCCCTTAAAAGTAGCAGCCCTAGCA GTCGGCATTATTGGACTCCTTACAGCCATAGAGCTTGCAGCCAAGACTAACGACCCTTATAAGACTAACT TCAAGAGCTCCACTCACCACTTTTCTAACATGCTCGGATACTTCCCTTCATTAATACACCGGCTCTCTCC AAAAGCTAGCCTTGTCCTCGGGCGCTCAACCGCTACTAAGCTTGACCAAACCTGACTTGAAATTGCAGGC CCAAAATCGATCACCCTCACCCAAATGGTATTAGCGCAAACAGTAGCCAATATCTCACGAGGCACAATTA AGAAATTTTTAACAATTTTCCTTCTAACTATAATCTTAGCAATTACCCTAACTATTATTTAAACCGCTCG AAGAGTTCCACGACTTAAACCCCGGGTTAGCTCTAGAACAACTAAAAGTGTTAAAAGTAACACCCAGGCA CAAATAACTAGTATCGCCCCCCCAAAGGAGTATATTATGGCTACACCGCCAACATCTCCTCGTAAGATGG AGAAGTCTTTTAGTTCATCGACAGCCACTCAAGAGCCTTCCTGCCAACCCCCTCAGAATAGCCCACCTGC AAATACAACCCCTAGCAAGTACACTAAGACATACCCTATTACTGAACGACTTCCCCAAGCCTCTGGAAAG GGTTCAGCTGCTAGTGCTGCTGAATAAGCAAACACTACAAGCATCCCCCCTAGGTAGATTAAAAACAAAA CTAGAGACAAGAAAGGCCCTCCACTACCAATCAACACCCCACATCCCACCCCAGCCGCCACTATTAACCC CAAGGCAGCAAAATAAGGCGTAGGGTTAGACGCAACAGCAATCAACCCTATAATTAAGGCTATCAATAGT AAAGACACGAAGTAAGTCATAATTCCCACTCAGACTTTAACCGAGACTAGTGACTTGAAGAGCCACCGTT GTAATTCAACTACAGGAACAATTAATGGCAAGCCTACGGAAAACCCACCCACTAATAAAAATCGCTAATC ACGCACTGGTTGACCTCCCAACACCCTCGAATATCTCTGCACTATGGAATTTTGGTTCCCTACTAGGATT GTGTTTAATTACTCAAATCCTGACCGGATTATTTCTGGCAATACATTACACCTCCGACATCTCAACCGCA TTTTCATCCGTAACTCACATTTGCCGTGACGTTAACTACGGCTGACTTATCCGTAACATACATGCCAACG GAGCATCATTTTTCTTCATCTGTATTTATATACATATCGCCCGGGGTCTCTACTACGGATCATATCTCTA TAAGGAGACCTGGAATATCGGAGTCGTCCTACTTCTCCTCGTCATAATAACGGCCTTTGTAGGCTACGTG CTCCCGTGGGGTCAAATGTCTTTCTGAGGTGCTACAGTTATTACAAACCTTCTCTCAGCAGTACCCTATA TGGGGGATACCTTGGTCCAATGAATTTGGGGAGGTTTCTCAGTGGACAACGCAACACTGACCCGATTCTT TGCCTTCCACTTCCTATTCCCCTTCGTAATCGCTGGTGCAACTGTTCTCCACCTACTTTTCCTGCACGAG ACAGGATCGAATAATCCCGCCGGATTAAACTCCGACGCAGATAAAATCTCCTTCCACCCCTACTTTTCCT ACAAGGACCTTCTTGGCTTCGTTCTAATATTATTAGCTCTCACATCCCTGACCTTATTCTCCCCTACCCT ACTCGGTGACCCAGAGAACTTCACCCCTGCTAATCCCCTGGTCACCCCCCCACACATCCAGCCTGAGTGA TATTTCTTATTCGCCTACGCCATTCTACGGTCTATCCCGAACAAATTAGGAGGTGTACTAGCACTCTTGT TTAGCATTCTAGTACTATTAGTGGTCCCGATTCTACACACCTCAAAACAACGAGGACTAACCTTCCGACC TATTACCCAATTCTTATTCTGAACCTTAGTTGCGGATATACTTATCCTGACATGAATCGGAGGTATACCT GTAGAACATCCATATATTATCATTGGCCAAGTCGCCTCCGTCCTGTACTTCGCATTGTTCCTCCTCCTCG CCCCACTTGCAGGCTGAGCGGAGAATAAAGCCCTGAAATGAGCTTGCCCCAGTAGCTTAATTTAAAGCAT CGGTCTTGTAATCCGAAGATCGAGGGTTAGACCCCCTCCTGGCGCCCAGAAAAGAGAGATTTTAACTCCC ACCCCCGGCTCCCAAAGCCGGGATTCTAAAGTTAAACTATTTTCTGATGGACCAATATGGTTACATATCA CGCATAGCCCCCCATATATTGTACGACAAACCCCCATGCGCTACATAGTACACTTGTAGCATGTAGGCTT AACATAGCTATGTATTATCACCATTCATTTTTTTTAACCTAAAAGCAAGTACTAACAACTAAGACGTGCA TAAACCAAATATATGCAATATTGTAGGACTATATATGTATTATCACCATTCATTTATATTAACCTAAAAG CAAGTACTAACGTCTAAGACGTGCATAAGCATATTATTAAAACTCAGAAATGATTTATCTTAACCCGGGA TATAGGTTATTCCCCTAAATTTCGCACTCAACATTTTCCTTGAAATGACCAACTACGATTTACTTCGACA ATATTAATTCAGTAAGAGACCACCAACCTTATCATATAAGGCATATCATGCATGATAGAATCAGGGACAT ATTATGGAGGGTTGTAAACTATTAACTATTCCTTGCATCTGATTCCCCTGTCACGGGCATGGCATGTTTA ATCCACCCTAGTGAGGTATCCTTGCATCTGATTCTTGGTGTAAATACATACTCTTCACCAACCCCACATG CCGGGCATTCTTTTATATGCATAACGTTCTCTTTTTTTGGTAGCCTTTCAATTACATTTCAGAGTGCAGG CTCAAGTAATATATCAAGGTTGTACATTTTCTTGCATGGGTAAATTAGGTTAATGATTAAAAGACATAAC TTAAGAATTACATTATACTATATCAAGTGCATAACGTATTTGTACTTCTTCAATTAACCCTGTTATAGAT GCCCCCCTCTTCGGTTTTCACGCGACAAACCCCCTTACCCCCTACGCTCAGCAAATCCTGTTCTCCTTGT CAAACCCCAAAAGCAAGGAAGGTTCGAGAGCGTCCAGACTAACAAGTTGAAATATGGGTTAGCCATCCGC GTTATATATATATATATGTGATTTATGCCCTAAAAGTGCCCCTAACAAAACACTTAAAAAGCTCTATTGA ATTTGTCACTAAATTTTTCAATGCTAAAAAATCGAACGTTTTTATT
Contact: Vadim E. Fraifeld, MD, PhD
Head: Lab for the Biology of Aging, The Shraga Segal Department of Microbiology, Immunology and Genetics, Faculty of Health Sciences, Ben-Gurion University of the Negev
P.O. Box 653, Beer-Sheva 8410501, Israel
Email:
Head: Lab for the Biology of Aging, The Shraga Segal Department of Microbiology, Immunology and Genetics, Faculty of Health Sciences, Ben-Gurion University of the Negev
P.O. Box 653, Beer-Sheva 8410501, Israel
Email:
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If you would like to cite this database please use:
Toren D, Barzilay T, Tacutu R, Lehmann G, Muradian KK, Fraifeld VE. MitoAge: a database for comparative analysis of mitochondrial DNA, with a special focus on animal longevity. Nucleic Acids Res. 2016; 44(D1):D1262-5.
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