Stats for order Anguilliformes
Browsing families:
Anguillidae (9)
| Stats for total mtDNA (group size: 9 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 40.9 - 41.5% | 58.5 - 59.1% | 4226 - 4360 | 2543 - 2613 | 4108 - 4234 | 5605 - 5745 | 15.0 - 88.0 |
| Median | 41.1% | 58.9% | 4306 | 2566 | 4163 | 5663 | 40.0 |
| Average ± stdev | 41.1 ± 0.2% | 58.9 ± 0.2% | 4293 ± 42 | 2573 ± 21 | 4162 ± 42 | 5666 ± 40 | 40.7 ± 21.8 |
| Coefficient of variation | 0.00 | 0.00 | 0.01 | 0.01 | 0.01 | 0.01 | 0.54 |
| Pearson correlation coefficient with log10MLS |
-0.04 | 0.04 | -0.43 | 0.70 | 0.54 | -0.62 | - |
| Pearson p-value (two tailed) |
9.26E-01 | 9.26E-01 | 2.42E-01 | 3.58E-02 | 1.31E-01 | 7.53E-02 | - |
| Stats for total protein-coding genes (group size: 9 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 40.9 - 41.5% | 58.5 - 59.1% | 3031 - 3149 | 1589 - 1665 | 2920 - 3031 | 3718 - 3813 | 15.0 - 88.0 |
| Median | 41.1% | 58.9% | 3095 | 1607 | 2962 | 3777 | 40.0 |
| Average ± stdev | 41.1 ± 0.2% | 58.9 ± 0.2% | 3091 ± 35 | 1619 ± 24 | 2965 ± 36 | 3771 ± 27 | 40.7 ± 21.8 |
| Coefficient of variation | 0.00 | 0.00 | 0.01 | 0.01 | 0.01 | 0.01 | 0.54 |
| Pearson correlation coefficient with log10MLS |
-0.18 | 0.18 | -0.53 | 0.64 | 0.62 | -0.69 | - |
| Pearson p-value (two tailed) |
6.42E-01 | 6.42E-01 | 1.43E-01 | 6.21E-02 | 7.77E-02 | 3.89E-02 | - |
| Stats for D-loop (group size: 9 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 29.4 - 32.7% | 67.3 - 70.6% | 175 - 195 | 102 - 128 | 277 - 297 | 374 - 405 | 15.0 - 88.0 |
| Median | 30.1% | 69.9% | 181 | 112 | 293 | 384 | 40.0 |
| Average ± stdev | 30.7 ± 1.2% | 69.3 ± 1.2% | 184 ± 6 | 114 ± 8 | 289 ± 7 | 385 ± 8 | 40.7 ± 21.8 |
| Coefficient of variation | 0.04 | 0.02 | 0.03 | 0.07 | 0.03 | 0.02 | 0.54 |
| Pearson correlation coefficient with log10MLS |
-0.05 | 0.05 | 0.18 | -0.35 | -0.05 | -0.27 | - |
| Pearson p-value (two tailed) |
9.08E-01 | 9.08E-01 | 6.43E-01 | 3.60E-01 | 8.89E-01 | 4.77E-01 | - |
| Stats for total tRNA-coding genes (group size: 9 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 42.4 - 43.4% | 56.6 - 57.6% | 373 - 378 | 288 - 301 | 382 - 391 | 498 - 511 | 15.0 - 88.0 |
| Median | 43.0% | 57.0% | 378 | 294 | 387 | 505 | 40.0 |
| Average ± stdev | 42.9 ± 0.3% | 57.1 ± 0.3% | 376 ± 2 | 295 ± 4 | 387 ± 3 | 504 ± 4 | 40.7 ± 21.8 |
| Coefficient of variation | 0.01 | 0.01 | 0.01 | 0.02 | 0.01 | 0.01 | 0.54 |
| Pearson correlation coefficient with log10MLS |
0.51 | -0.51 | -0.08 | 0.55 | 0.16 | -0.60 | - |
| Pearson p-value (two tailed) |
1.58E-01 | 1.58E-01 | 8.36E-01 | 1.21E-01 | 6.73E-01 | 8.48E-02 | - |
| Stats for total rRNA-coding genes (group size: 9 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 43.3 - 43.9% | 56.1 - 56.7% | 617 - 641 | 523 - 537 | 496 - 522 | 973 - 997 | 15.0 - 88.0 |
| Median | 43.8% | 56.2% | 630 | 530 | 507 | 988 | 40.0 |
| Average ± stdev | 43.7 ± 0.2% | 56.3 ± 0.2% | 630 ± 6 | 531 ± 3 | 508 ± 7 | 987 ± 6 | 40.7 ± 21.8 |
| Coefficient of variation | 0.01 | 0.00 | 0.01 | 0.01 | 0.02 | 0.01 | 0.54 |
| Pearson correlation coefficient with log10MLS |
0.25 | -0.25 | 0.00 | 0.39 | 0.04 | -0.26 | - |
| Pearson p-value (two tailed) |
5.18E-01 | 5.18E-01 | 9.94E-01 | 3.05E-01 | 9.17E-01 | 4.99E-01 | - |
| Stats for ATP6 (group size: 9 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 37.9 - 40.8% | 59.2 - 62.1% | 176 - 192 | 82 - 88 | 192 - 207 | 212 - 222 | 15.0 - 88.0 |
| Median | 39.7% | 60.3% | 184 | 87 | 196 | 216 | 40.0 |
| Average ± stdev | 39.4 ± 0.9% | 60.6 ± 0.9% | 183 ± 4 | 85 ± 2 | 197 ± 4 | 216 ± 2 | 40.7 ± 21.8 |
| Coefficient of variation | 0.02 | 0.02 | 0.03 | 0.02 | 0.02 | 0.01 | 0.54 |
| Pearson correlation coefficient with log10MLS |
-0.14 | 0.14 | -0.25 | 0.19 | -0.09 | 0.42 | - |
| Pearson p-value (two tailed) |
7.15E-01 | 7.15E-01 | 5.17E-01 | 6.22E-01 | 8.23E-01 | 2.66E-01 | - |
| Stats for ATP8 (group size: 9 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 39.3 - 42.9% | 57.1 - 60.7% | 45 - 50 | 21 - 24 | 38 - 42 | 57 - 61 | 15.0 - 88.0 |
| Median | 41.1% | 58.9% | 46 | 22 | 40 | 59 | 40.0 |
| Average ± stdev | 40.9 ± 1.1% | 59.1 ± 1.1% | 46 ± 1 | 22 ± 1 | 40 ± 1 | 59 ± 1 | 40.7 ± 21.8 |
| Coefficient of variation | 0.03 | 0.02 | 0.04 | 0.05 | 0.04 | 0.03 | 0.54 |
| Pearson correlation coefficient with log10MLS |
0.58 | -0.58 | 0.66 | -0.17 | -0.48 | -0.18 | - |
| Pearson p-value (two tailed) |
1.03E-01 | 1.03E-01 | 5.42E-02 | 6.60E-01 | 1.88E-01 | 6.46E-01 | - |
| Stats for COX1 (group size: 9 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 42.4 - 43.3% | 56.7 - 57.6% | 396 - 411 | 276 - 286 | 442 - 462 | 448 - 464 | 15.0 - 88.0 |
| Median | 42.7% | 57.3% | 400 | 282 | 455 | 456 | 40.0 |
| Average ± stdev | 42.8 ± 0.3% | 57.2 ± 0.3% | 400 ± 4 | 281 ± 3 | 455 ± 6 | 456 ± 4 | 40.7 ± 21.8 |
| Coefficient of variation | 0.01 | 0.01 | 0.01 | 0.01 | 0.01 | 0.01 | 0.54 |
| Pearson correlation coefficient with log10MLS |
0.24 | -0.24 | -0.24 | 0.66 | 0.27 | -0.55 | - |
| Pearson p-value (two tailed) |
5.38E-01 | 5.38E-01 | 5.27E-01 | 5.26E-02 | 4.74E-01 | 1.28E-01 | - |
| Stats for COX2 (group size: 9 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 41.4 - 42.7% | 57.3 - 58.6% | 171 - 179 | 112 - 120 | 171 - 176 | 221 - 230 | 15.0 - 88.0 |
| Median | 42.4% | 57.6% | 176 | 116 | 174 | 225 | 40.0 |
| Average ± stdev | 42.2 ± 0.5% | 57.8 ± 0.5% | 175 ± 2 | 116 ± 2 | 173 ± 1 | 225 ± 2 | 40.7 ± 21.8 |
| Coefficient of variation | 0.01 | 0.01 | 0.01 | 0.02 | 0.01 | 0.01 | 0.54 |
| Pearson correlation coefficient with log10MLS |
0.10 | -0.10 | 0.38 | -0.22 | -0.08 | -0.07 | - |
| Pearson p-value (two tailed) |
8.05E-01 | 8.05E-01 | 3.13E-01 | 5.74E-01 | 8.41E-01 | 8.48E-01 | - |
| Stats for COX3 (group size: 9 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 42.4 - 43.9% | 56.1 - 57.6% | 205 - 215 | 125 - 130 | 205 - 217 | 231 - 241 | 15.0 - 88.0 |
| Median | 43.3% | 56.7% | 213 | 126 | 209 | 235 | 40.0 |
| Average ± stdev | 43.2 ± 0.4% | 56.8 ± 0.4% | 212 ± 2 | 126 ± 1 | 210 ± 3 | 235 ± 2 | 40.7 ± 21.8 |
| Coefficient of variation | 0.01 | 0.01 | 0.01 | 0.01 | 0.02 | 0.01 | 0.54 |
| Pearson correlation coefficient with log10MLS |
0.44 | -0.44 | 0.31 | 0.36 | 0.15 | -0.69 | - |
| Pearson p-value (two tailed) |
2.34E-01 | 2.34E-01 | 4.24E-01 | 3.45E-01 | 6.95E-01 | 4.13E-02 | - |
| Stats for CYTB (group size: 9 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 41.2 - 42.7% | 57.3 - 58.8% | 309 - 324 | 158 - 172 | 310 - 328 | 333 - 357 | 15.0 - 88.0 |
| Median | 41.7% | 58.3% | 314 | 160 | 317 | 349 | 40.0 |
| Average ± stdev | 41.9 ± 0.6% | 58.1 ± 0.6% | 315 ± 5 | 162 ± 4 | 316 ± 5 | 345 ± 7 | 40.7 ± 21.8 |
| Coefficient of variation | 0.01 | 0.01 | 0.02 | 0.03 | 0.02 | 0.02 | 0.54 |
| Pearson correlation coefficient with log10MLS |
0.46 | -0.46 | 0.09 | 0.58 | 0.36 | -0.64 | - |
| Pearson p-value (two tailed) |
2.10E-01 | 2.10E-01 | 8.13E-01 | 1.02E-01 | 3.44E-01 | 6.26E-02 | - |
| Stats for ND1 (group size: 9 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 41.0 - 43.3% | 56.7 - 59.0% | 271 - 287 | 124 - 138 | 237 - 254 | 310 - 321 | 15.0 - 88.0 |
| Median | 42.5% | 57.5% | 283 | 133 | 244 | 314 | 40.0 |
| Average ± stdev | 42.4 ± 0.7% | 57.6 ± 0.7% | 280 ± 5 | 132 ± 3 | 244 ± 5 | 314 ± 3 | 40.7 ± 21.8 |
| Coefficient of variation | 0.02 | 0.01 | 0.02 | 0.03 | 0.02 | 0.01 | 0.54 |
| Pearson correlation coefficient with log10MLS |
-0.56 | 0.56 | -0.77 | 0.18 | 0.70 | -0.10 | - |
| Pearson p-value (two tailed) |
1.15E-01 | 1.15E-01 | 1.55E-02 | 6.39E-01 | 3.46E-02 | 8.06E-01 | - |
| Stats for ND2 (group size: 9 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 38.7 - 39.5% | 60.5 - 61.3% | 272 - 288 | 118 - 135 | 226 - 245 | 393 - 415 | 15.0 - 88.0 |
| Median | 39.0% | 61.0% | 282 | 125 | 234 | 405 | 40.0 |
| Average ± stdev | 39.1 ± 0.3% | 60.9 ± 0.3% | 282 ± 4 | 126 ± 5 | 233 ± 5 | 403 ± 6 | 40.7 ± 21.8 |
| Coefficient of variation | 0.01 | 0.00 | 0.02 | 0.04 | 0.02 | 0.02 | 0.54 |
| Pearson correlation coefficient with log10MLS |
0.44 | -0.44 | -0.51 | 0.65 | 0.49 | -0.60 | - |
| Pearson p-value (two tailed) |
2.30E-01 | 2.30E-01 | 1.65E-01 | 5.56E-02 | 1.85E-01 | 9.09E-02 | - |
| Stats for ND3 (group size: 9 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 41.0 - 43.6% | 56.4 - 59.0% | 94 - 101 | 47 - 55 | 101 - 110 | 93 - 100 | 15.0 - 88.0 |
| Median | 41.8% | 58.2% | 97 | 49 | 106 | 97 | 40.0 |
| Average ± stdev | 42.2 ± 0.7% | 57.8 ± 0.7% | 97 ± 1 | 49 ± 2 | 105 ± 2 | 96 ± 2 | 40.7 ± 21.8 |
| Coefficient of variation | 0.02 | 0.01 | 0.02 | 0.05 | 0.02 | 0.02 | 0.54 |
| Pearson correlation coefficient with log10MLS |
0.55 | -0.55 | -0.08 | 0.57 | -0.31 | -0.24 | - |
| Pearson p-value (two tailed) |
1.25E-01 | 1.25E-01 | 8.31E-01 | 1.13E-01 | 4.11E-01 | 5.27E-01 | - |
| Stats for ND4 (group size: 9 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 40.0 - 41.2% | 58.8 - 60.0% | 357 - 381 | 183 - 197 | 355 - 377 | 450 - 464 | 15.0 - 88.0 |
| Median | 40.7% | 59.3% | 373 | 190 | 360 | 458 | 40.0 |
| Average ± stdev | 40.6 ± 0.4% | 59.4 ± 0.4% | 370 ± 7 | 189 ± 4 | 363 ± 7 | 457 ± 4 | 40.7 ± 21.8 |
| Coefficient of variation | 0.01 | 0.01 | 0.02 | 0.02 | 0.02 | 0.01 | 0.54 |
| Pearson correlation coefficient with log10MLS |
-0.64 | 0.64 | -0.69 | 0.41 | 0.67 | -0.43 | - |
| Pearson p-value (two tailed) |
6.10E-02 | 6.10E-02 | 4.06E-02 | 2.70E-01 | 4.98E-02 | 2.44E-01 | - |
| Stats for ND4L (group size: 9 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 42.4 - 46.1% | 53.9 - 57.6% | 87 - 98 | 37 - 43 | 78 - 88 | 77 - 85 | 15.0 - 88.0 |
| Median | 45.1% | 54.9% | 91 | 40 | 85 | 83 | 40.0 |
| Average ± stdev | 44.5 ± 1.3% | 55.5 ± 1.3% | 91 ± 4 | 40 ± 2 | 83 ± 3 | 81 ± 2 | 40.7 ± 21.8 |
| Coefficient of variation | 0.03 | 0.02 | 0.05 | 0.06 | 0.04 | 0.04 | 0.54 |
| Pearson correlation coefficient with log10MLS |
0.06 | -0.06 | -0.30 | 0.66 | 0.57 | -0.75 | - |
| Pearson p-value (two tailed) |
8.81E-01 | 8.81E-01 | 4.27E-01 | 5.11E-02 | 1.05E-01 | 1.92E-02 | - |
| Stats for ND5 (group size: 9 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 38.2 - 39.8% | 60.2 - 61.8% | 470 - 495 | 224 - 241 | 460 - 491 | 645 - 657 | 15.0 - 88.0 |
| Median | 39.1% | 60.9% | 491 | 233 | 470 | 648 | 40.0 |
| Average ± stdev | 39.0 ± 0.5% | 61.0 ± 0.5% | 486 ± 8 | 232 ± 4 | 473 ± 9 | 649 ± 3 | 40.7 ± 21.8 |
| Coefficient of variation | 0.01 | 0.01 | 0.02 | 0.02 | 0.02 | 0.01 | 0.54 |
| Pearson correlation coefficient with log10MLS |
-0.64 | 0.64 | -0.59 | -0.00 | 0.62 | -0.20 | - |
| Pearson p-value (two tailed) |
6.25E-02 | 6.25E-02 | 9.16E-02 | 9.97E-01 | 7.75E-02 | 6.13E-01 | - |
| Stats for ND6 (group size: 9 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 39.1 - 40.8% | 59.2 - 60.9% | 147 - 155 | 51 - 58 | 72 - 80 | 236 - 244 | 15.0 - 88.0 |
| Median | 39.5% | 60.5% | 153 | 54 | 74 | 240 | 40.0 |
| Average ± stdev | 39.7 ± 0.6% | 60.3 ± 0.6% | 152 ± 2 | 54 ± 2 | 75 ± 2 | 239 ± 2 | 40.7 ± 21.8 |
| Coefficient of variation | 0.02 | 0.01 | 0.02 | 0.05 | 0.04 | 0.01 | 0.54 |
| Pearson correlation coefficient with log10MLS |
0.19 | -0.19 | -0.30 | 0.55 | 0.00 | -0.19 | - |
| Pearson p-value (two tailed) |
6.24E-01 | 6.24E-01 | 4.25E-01 | 1.29E-01 | 1.00E+00 | 6.19E-01 | - |
| Stats for 12S rRNA gene (group size: 9 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 46.0 - 46.7% | 53.3 - 54.0% | 235 - 242 | 195 - 202 | 182 - 193 | 320 - 329 | 15.0 - 88.0 |
| Median | 46.4% | 53.6% | 239 | 201 | 185 | 323 | 40.0 |
| Average ± stdev | 46.4 ± 0.2% | 53.6 ± 0.2% | 239 ± 2 | 200 ± 2 | 185 ± 3 | 323 ± 2 | 40.7 ± 21.8 |
| Coefficient of variation | 0.01 | 0.00 | 0.01 | 0.01 | 0.02 | 0.01 | 0.54 |
| Pearson correlation coefficient with log10MLS |
0.05 | -0.05 | 0.09 | -0.07 | -0.40 | 0.36 | - |
| Pearson p-value (two tailed) |
8.98E-01 | 8.98E-01 | 8.24E-01 | 8.57E-01 | 2.90E-01 | 3.46E-01 | - |
| Stats for 16S rRNA gene (group size: 9 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 41.6 - 42.6% | 57.4 - 58.4% | 377 - 399 | 327 - 335 | 313 - 337 | 652 - 673 | 15.0 - 88.0 |
| Median | 42.5% | 57.5% | 392 | 330 | 322 | 663 | 40.0 |
| Average ± stdev | 42.2 ± 0.4% | 57.8 ± 0.4% | 391 ± 5 | 330 ± 2 | 323 ± 6 | 663 ± 5 | 40.7 ± 21.8 |
| Coefficient of variation | 0.01 | 0.01 | 0.01 | 0.01 | 0.02 | 0.01 | 0.54 |
| Pearson correlation coefficient with log10MLS |
0.22 | -0.22 | -0.03 | 0.61 | 0.23 | -0.46 | - |
| Pearson p-value (two tailed) |
5.67E-01 | 5.67E-01 | 9.42E-01 | 8.42E-02 | 5.54E-01 | 2.16E-01 | - |
Contact: Vadim E. Fraifeld, MD, PhD
Head: Lab for the Biology of Aging, The Shraga Segal Department of Microbiology, Immunology and Genetics, Faculty of Health Sciences, Ben-Gurion University of the Negev
P.O. Box 653, Beer-Sheva 8410501, Israel
Email:
Head: Lab for the Biology of Aging, The Shraga Segal Department of Microbiology, Immunology and Genetics, Faculty of Health Sciences, Ben-Gurion University of the Negev
P.O. Box 653, Beer-Sheva 8410501, Israel
Email:
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If you would like to cite this database please use:
Toren D, Barzilay T, Tacutu R, Lehmann G, Muradian KK, Fraifeld VE. MitoAge: a database for comparative analysis of mitochondrial DNA, with a special focus on animal longevity. Nucleic Acids Res. 2016; 44(D1):D1262-5.
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