Stats for order Siluriformes
Stats for total mtDNA (group size: 4 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Silurus glanis |
45.0 |
55.0 |
4764 |
2669 |
4108 |
4985 |
60.0 |
Ictalurus punctatus |
44.6 |
55.4 |
4720 |
2641 |
4317 |
4819 |
16.0 |
Malapterurus electricus |
42.4 |
57.6 |
4548 |
2449 |
4380 |
5127 |
10.0 |
Heteropneustes fossilis |
41.8 |
58.2 |
4437 |
2453 |
4296 |
5303 |
17.5 |
Stats for total protein-coding genes (group size: 4 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Silurus glanis |
45.4 |
54.6 |
3488 |
1686 |
2917 |
3296 |
60.0 |
Ictalurus punctatus |
45.0 |
55.0 |
3438 |
1683 |
3074 |
3190 |
16.0 |
Malapterurus electricus |
42.2 |
57.8 |
3300 |
1503 |
3106 |
3468 |
10.0 |
Heteropneustes fossilis |
41.5 |
58.5 |
3213 |
1511 |
3064 |
3599 |
17.5 |
Stats for D-loop (group size: 4 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Silurus glanis |
39.3 |
60.7 |
202 |
147 |
255 |
283 |
60.0 |
Ictalurus punctatus |
36.7 |
63.3 |
206 |
119 |
278 |
282 |
16.0 |
Malapterurus electricus |
35.5 |
64.5 |
183 |
124 |
307 |
252 |
10.0 |
Heteropneustes fossilis |
37.0 |
63.0 |
193 |
125 |
270 |
271 |
17.5 |
Stats for total tRNA-coding genes (group size: 4 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Silurus glanis |
44.1 |
55.9 |
391 |
295 |
379 |
489 |
60.0 |
Ictalurus punctatus |
43.3 |
56.7 |
380 |
294 |
393 |
488 |
16.0 |
Malapterurus electricus |
42.7 |
57.3 |
379 |
287 |
390 |
503 |
10.0 |
Heteropneustes fossilis |
42.5 |
57.5 |
373 |
287 |
395 |
499 |
17.5 |
Stats for total rRNA-coding genes (group size: 4 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Silurus glanis |
45.4 |
54.6 |
666 |
529 |
540 |
898 |
60.0 |
Ictalurus punctatus |
46.1 |
53.9 |
670 |
535 |
561 |
847 |
16.0 |
Malapterurus electricus |
45.0 |
55.0 |
662 |
524 |
565 |
886 |
10.0 |
Heteropneustes fossilis |
44.4 |
55.6 |
643 |
519 |
546 |
911 |
17.5 |
Stats for ATP6 (group size: 4 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Silurus glanis |
43.1 |
56.9 |
205 |
90 |
189 |
200 |
60.0 |
Ictalurus punctatus |
43.9 |
56.1 |
216 |
84 |
185 |
199 |
16.0 |
Malapterurus electricus |
39.1 |
60.9 |
196 |
71 |
197 |
219 |
10.0 |
Heteropneustes fossilis |
39.7 |
60.3 |
199 |
72 |
182 |
230 |
17.5 |
Stats for ATP8 (group size: 4 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Silurus glanis |
39.3 |
60.7 |
46 |
20 |
44 |
58 |
60.0 |
Ictalurus punctatus |
39.3 |
60.7 |
45 |
21 |
43 |
59 |
16.0 |
Malapterurus electricus |
37.5 |
62.5 |
47 |
16 |
45 |
60 |
10.0 |
Heteropneustes fossilis |
38.1 |
61.9 |
46 |
18 |
42 |
62 |
17.5 |
Stats for COX1 (group size: 4 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Silurus glanis |
46.4 |
53.6 |
434 |
286 |
417 |
414 |
60.0 |
Ictalurus punctatus |
46.3 |
53.7 |
428 |
290 |
449 |
384 |
16.0 |
Malapterurus electricus |
42.0 |
58.0 |
384 |
266 |
454 |
444 |
10.0 |
Heteropneustes fossilis |
41.6 |
58.4 |
382 |
263 |
459 |
447 |
17.5 |
Stats for COX2 (group size: 4 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Silurus glanis |
45.6 |
54.4 |
200 |
115 |
183 |
193 |
60.0 |
Ictalurus punctatus |
44.6 |
55.4 |
197 |
111 |
184 |
199 |
16.0 |
Malapterurus electricus |
40.1 |
59.9 |
175 |
102 |
200 |
214 |
10.0 |
Heteropneustes fossilis |
41.8 |
58.2 |
186 |
103 |
188 |
214 |
17.5 |
Stats for COX3 (group size: 4 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Silurus glanis |
48.5 |
51.5 |
242 |
138 |
198 |
206 |
60.0 |
Ictalurus punctatus |
46.7 |
53.3 |
233 |
133 |
217 |
201 |
16.0 |
Malapterurus electricus |
45.2 |
54.8 |
229 |
125 |
215 |
215 |
10.0 |
Heteropneustes fossilis |
41.8 |
58.2 |
201 |
127 |
233 |
223 |
17.5 |
Stats for CYTB (group size: 4 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Silurus glanis |
45.4 |
54.6 |
355 |
162 |
307 |
314 |
60.0 |
Ictalurus punctatus |
45.5 |
54.5 |
353 |
165 |
320 |
300 |
16.0 |
Malapterurus electricus |
43.8 |
56.2 |
359 |
139 |
315 |
325 |
10.0 |
Heteropneustes fossilis |
41.4 |
58.6 |
317 |
154 |
329 |
338 |
17.5 |
Stats for ND1 (group size: 4 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Silurus glanis |
45.5 |
54.5 |
295 |
149 |
259 |
272 |
60.0 |
Ictalurus punctatus |
44.3 |
55.7 |
291 |
141 |
279 |
264 |
16.0 |
Malapterurus electricus |
43.9 |
56.1 |
286 |
142 |
264 |
282 |
10.0 |
Heteropneustes fossilis |
42.9 |
57.1 |
283 |
135 |
260 |
297 |
17.5 |
Stats for ND2 (group size: 4 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Silurus glanis |
46.3 |
53.7 |
356 |
128 |
233 |
328 |
60.0 |
Ictalurus punctatus |
46.3 |
53.7 |
345 |
140 |
241 |
321 |
16.0 |
Malapterurus electricus |
43.6 |
56.4 |
344 |
112 |
256 |
333 |
10.0 |
Heteropneustes fossilis |
41.3 |
58.7 |
317 |
115 |
243 |
370 |
17.5 |
Stats for ND3 (group size: 4 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Silurus glanis |
47.9 |
52.1 |
112 |
55 |
94 |
88 |
60.0 |
Ictalurus punctatus |
48.1 |
51.9 |
113 |
56 |
104 |
78 |
16.0 |
Malapterurus electricus |
41.5 |
58.5 |
97 |
48 |
105 |
99 |
10.0 |
Heteropneustes fossilis |
42.4 |
57.6 |
104 |
44 |
103 |
98 |
17.5 |
Stats for ND4 (group size: 4 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Silurus glanis |
44.5 |
55.5 |
409 |
206 |
376 |
390 |
60.0 |
Ictalurus punctatus |
43.8 |
56.2 |
404 |
201 |
388 |
388 |
16.0 |
Malapterurus electricus |
41.1 |
58.9 |
393 |
175 |
388 |
425 |
10.0 |
Heteropneustes fossilis |
41.0 |
59.0 |
390 |
176 |
377 |
438 |
17.5 |
Stats for ND4L (group size: 4 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Silurus glanis |
48.5 |
51.5 |
95 |
49 |
82 |
71 |
60.0 |
Ictalurus punctatus |
47.5 |
52.5 |
94 |
47 |
84 |
72 |
16.0 |
Malapterurus electricus |
43.4 |
56.6 |
86 |
43 |
90 |
78 |
10.0 |
Heteropneustes fossilis |
46.8 |
53.2 |
95 |
44 |
85 |
73 |
17.5 |
Stats for ND5 (group size: 4 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Silurus glanis |
43.2 |
56.8 |
550 |
239 |
473 |
565 |
60.0 |
Ictalurus punctatus |
42.7 |
57.3 |
536 |
243 |
507 |
538 |
16.0 |
Malapterurus electricus |
41.4 |
58.6 |
536 |
221 |
496 |
574 |
10.0 |
Heteropneustes fossilis |
40.0 |
60.0 |
514 |
217 |
492 |
604 |
17.5 |
Stats for ND6 (group size: 4 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Silurus glanis |
47.2 |
52.8 |
193 |
52 |
67 |
207 |
60.0 |
Ictalurus punctatus |
46.7 |
53.3 |
187 |
54 |
78 |
197 |
16.0 |
Malapterurus electricus |
42.3 |
57.7 |
171 |
46 |
87 |
209 |
10.0 |
Heteropneustes fossilis |
43.7 |
56.3 |
181 |
46 |
78 |
214 |
17.5 |
Stats for 12S rRNA gene (group size: 4 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Silurus glanis |
47.3 |
52.7 |
248 |
203 |
204 |
299 |
60.0 |
Ictalurus punctatus |
49.2 |
50.8 |
265 |
204 |
202 |
282 |
16.0 |
Malapterurus electricus |
47.9 |
52.1 |
258 |
199 |
197 |
300 |
10.0 |
Heteropneustes fossilis |
46.5 |
53.5 |
251 |
193 |
197 |
314 |
17.5 |
Stats for 16S rRNA gene (group size: 4 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Silurus glanis |
44.3 |
55.7 |
418 |
326 |
336 |
599 |
60.0 |
Ictalurus punctatus |
44.3 |
55.7 |
405 |
331 |
359 |
565 |
16.0 |
Malapterurus electricus |
43.3 |
56.7 |
404 |
325 |
368 |
586 |
10.0 |
Heteropneustes fossilis |
43.1 |
56.9 |
392 |
326 |
349 |
597 |
17.5 |
Contact: Vadim E. Fraifeld, MD, PhD
Head: Lab for the Biology of Aging,
The Shraga Segal Department of Microbiology, Immunology and Genetics,
Faculty of Health Sciences, Ben-Gurion University of the Negev
P.O. Box 653, Beer-Sheva 8410501, Israel
Email:
- How to cite us:
-
If you would like to cite this database please use:
Toren D, Barzilay T, Tacutu R, Lehmann G, Muradian KK, Fraifeld VE.
MitoAge: a database for comparative analysis of mitochondrial DNA, with a special focus on animal longevity.
Nucleic Acids Res. 2016; 44(D1):D1262-5.