Stats for order Scorpaeniformes
Stats for total mtDNA (group size: 4 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Ophiodon elongatus |
47.7 |
52.3 |
4985 |
2898 |
4237 |
4408 |
20.0 |
Anoplopoma fimbria |
47.9 |
52.1 |
4885 |
3027 |
4297 |
4298 |
114.0 |
Cottus poecilopus |
48.6 |
51.4 |
5032 |
3011 |
4263 |
4254 |
8.0 |
Pterois volitans |
46.9 |
53.1 |
4761 |
2973 |
4220 |
4546 |
10.0 |
Stats for total protein-coding genes (group size: 4 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Ophiodon elongatus |
48.6 |
51.4 |
3700 |
1849 |
3033 |
2824 |
20.0 |
Anoplopoma fimbria |
49.0 |
51.0 |
3622 |
1967 |
3098 |
2720 |
114.0 |
Cottus poecilopus |
49.5 |
50.5 |
3710 |
1933 |
3073 |
2691 |
8.0 |
Pterois volitans |
47.7 |
52.3 |
3492 |
1948 |
3018 |
2949 |
10.0 |
Stats for D-loop (group size: 3 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Ophiodon elongatus |
36.5 |
63.5 |
179 |
140 |
269 |
286 |
20.0 |
Anoplopoma fimbria |
38.9 |
61.1 |
205 |
149 |
261 |
294 |
114.0 |
Cottus poecilopus |
40.9 |
59.1 |
192 |
158 |
248 |
258 |
8.0 |
Stats for total tRNA-coding genes (group size: 4 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Ophiodon elongatus |
46.7 |
53.3 |
394 |
330 |
363 |
463 |
20.0 |
Anoplopoma fimbria |
46.6 |
53.4 |
389 |
334 |
375 |
453 |
114.0 |
Cottus poecilopus |
46.6 |
53.4 |
396 |
327 |
368 |
460 |
8.0 |
Pterois volitans |
45.8 |
54.2 |
391 |
320 |
376 |
467 |
10.0 |
Stats for total rRNA-coding genes (group size: 4 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Ophiodon elongatus |
47.6 |
52.4 |
692 |
564 |
554 |
826 |
20.0 |
Anoplopoma fimbria |
47.0 |
53.0 |
668 |
572 |
560 |
839 |
114.0 |
Cottus poecilopus |
47.5 |
52.5 |
686 |
566 |
555 |
827 |
8.0 |
Pterois volitans |
47.1 |
52.9 |
683 |
565 |
556 |
846 |
10.0 |
Stats for ATP6 (group size: 4 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Ophiodon elongatus |
49.7 |
50.3 |
242 |
98 |
174 |
170 |
20.0 |
Anoplopoma fimbria |
48.4 |
51.6 |
230 |
101 |
190 |
163 |
114.0 |
Cottus poecilopus |
49.3 |
50.7 |
235 |
102 |
193 |
154 |
8.0 |
Pterois volitans |
45.2 |
54.8 |
207 |
102 |
188 |
187 |
10.0 |
Stats for ATP8 (group size: 4 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Ophiodon elongatus |
46.4 |
53.6 |
58 |
20 |
38 |
52 |
20.0 |
Anoplopoma fimbria |
47.0 |
53.0 |
54 |
25 |
43 |
46 |
114.0 |
Cottus poecilopus |
47.6 |
52.4 |
59 |
21 |
39 |
49 |
8.0 |
Pterois volitans |
47.0 |
53.0 |
57 |
22 |
38 |
51 |
10.0 |
Stats for COX1 (group size: 4 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Ophiodon elongatus |
47.1 |
52.9 |
446 |
284 |
450 |
371 |
20.0 |
Anoplopoma fimbria |
47.0 |
53.0 |
442 |
287 |
448 |
374 |
114.0 |
Cottus poecilopus |
48.2 |
51.8 |
458 |
290 |
445 |
358 |
8.0 |
Pterois volitans |
44.9 |
55.1 |
393 |
303 |
468 |
387 |
10.0 |
Stats for COX2 (group size: 4 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Ophiodon elongatus |
44.0 |
56.0 |
191 |
113 |
197 |
190 |
20.0 |
Anoplopoma fimbria |
46.0 |
54.0 |
199 |
119 |
186 |
187 |
114.0 |
Cottus poecilopus |
47.3 |
52.7 |
204 |
123 |
182 |
182 |
8.0 |
Pterois volitans |
44.6 |
55.4 |
187 |
121 |
194 |
189 |
10.0 |
Stats for COX3 (group size: 4 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Ophiodon elongatus |
50.3 |
49.7 |
256 |
139 |
205 |
185 |
20.0 |
Anoplopoma fimbria |
48.5 |
51.5 |
231 |
150 |
222 |
182 |
114.0 |
Cottus poecilopus |
49.9 |
50.1 |
245 |
147 |
207 |
186 |
8.0 |
Pterois volitans |
48.5 |
51.5 |
237 |
144 |
206 |
198 |
10.0 |
Stats for CYTB (group size: 4 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Ophiodon elongatus |
48.4 |
51.6 |
368 |
184 |
323 |
266 |
20.0 |
Anoplopoma fimbria |
49.3 |
50.7 |
367 |
196 |
326 |
252 |
114.0 |
Cottus poecilopus |
49.4 |
50.6 |
372 |
192 |
325 |
252 |
8.0 |
Pterois volitans |
50.5 |
49.5 |
373 |
203 |
302 |
263 |
10.0 |
Stats for ND1 (group size: 4 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Ophiodon elongatus |
48.4 |
51.6 |
319 |
153 |
271 |
232 |
20.0 |
Anoplopoma fimbria |
49.6 |
50.4 |
309 |
175 |
288 |
203 |
114.0 |
Cottus poecilopus |
52.1 |
47.9 |
326 |
182 |
278 |
189 |
8.0 |
Pterois volitans |
48.0 |
52.0 |
297 |
171 |
275 |
232 |
10.0 |
Stats for ND2 (group size: 4 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Ophiodon elongatus |
51.1 |
48.9 |
381 |
153 |
251 |
260 |
20.0 |
Anoplopoma fimbria |
49.4 |
50.6 |
359 |
158 |
275 |
254 |
114.0 |
Cottus poecilopus |
51.6 |
48.4 |
379 |
161 |
259 |
247 |
8.0 |
Pterois volitans |
50.8 |
49.2 |
361 |
170 |
254 |
261 |
10.0 |
Stats for ND3 (group size: 4 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Ophiodon elongatus |
49.0 |
51.0 |
112 |
59 |
103 |
75 |
20.0 |
Anoplopoma fimbria |
53.0 |
47.0 |
119 |
66 |
102 |
62 |
114.0 |
Cottus poecilopus |
51.3 |
48.7 |
114 |
65 |
104 |
66 |
8.0 |
Pterois volitans |
50.1 |
49.9 |
110 |
65 |
99 |
75 |
10.0 |
Stats for ND4 (group size: 4 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Ophiodon elongatus |
49.8 |
50.2 |
455 |
233 |
370 |
323 |
20.0 |
Anoplopoma fimbria |
51.6 |
48.4 |
466 |
246 |
357 |
312 |
114.0 |
Cottus poecilopus |
50.5 |
49.5 |
459 |
239 |
376 |
307 |
8.0 |
Pterois volitans |
47.6 |
52.4 |
424 |
233 |
365 |
359 |
10.0 |
Stats for ND4L (group size: 4 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Ophiodon elongatus |
53.5 |
46.5 |
109 |
50 |
81 |
57 |
20.0 |
Anoplopoma fimbria |
50.8 |
49.2 |
100 |
51 |
85 |
61 |
114.0 |
Cottus poecilopus |
52.5 |
47.5 |
109 |
47 |
82 |
59 |
8.0 |
Pterois volitans |
52.2 |
47.8 |
105 |
50 |
81 |
61 |
10.0 |
Stats for ND5 (group size: 4 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Ophiodon elongatus |
47.7 |
52.3 |
601 |
277 |
490 |
471 |
20.0 |
Anoplopoma fimbria |
47.3 |
52.7 |
575 |
294 |
511 |
459 |
114.0 |
Cottus poecilopus |
46.8 |
53.2 |
577 |
283 |
514 |
465 |
8.0 |
Pterois volitans |
46.4 |
53.6 |
567 |
285 |
477 |
508 |
10.0 |
Stats for ND6 (group size: 4 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Ophiodon elongatus |
48.5 |
51.5 |
165 |
88 |
86 |
183 |
20.0 |
Anoplopoma fimbria |
52.5 |
47.5 |
173 |
101 |
72 |
176 |
114.0 |
Cottus poecilopus |
49.6 |
50.4 |
175 |
84 |
76 |
187 |
8.0 |
Pterois volitans |
49.6 |
50.4 |
178 |
81 |
76 |
187 |
10.0 |
Stats for 12S rRNA gene (group size: 4 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Ophiodon elongatus |
49.3 |
50.7 |
260 |
206 |
188 |
291 |
20.0 |
Anoplopoma fimbria |
48.5 |
51.5 |
245 |
213 |
199 |
288 |
114.0 |
Cottus poecilopus |
48.6 |
51.4 |
254 |
206 |
189 |
298 |
8.0 |
Pterois volitans |
48.0 |
52.0 |
252 |
202 |
202 |
290 |
10.0 |
Stats for 16S rRNA gene (group size: 4 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Ophiodon elongatus |
46.7 |
53.3 |
432 |
358 |
366 |
535 |
20.0 |
Anoplopoma fimbria |
46.2 |
53.8 |
423 |
359 |
361 |
551 |
114.0 |
Cottus poecilopus |
46.9 |
53.1 |
432 |
360 |
366 |
529 |
8.0 |
Pterois volitans |
46.6 |
53.4 |
431 |
363 |
354 |
556 |
10.0 |
Contact: Vadim E. Fraifeld, MD, PhD
Head: Lab for the Biology of Aging,
The Shraga Segal Department of Microbiology, Immunology and Genetics,
Faculty of Health Sciences, Ben-Gurion University of the Negev
P.O. Box 653, Beer-Sheva 8410501, Israel
Email:
- How to cite us:
-
If you would like to cite this database please use:
Toren D, Barzilay T, Tacutu R, Lehmann G, Muradian KK, Fraifeld VE.
MitoAge: a database for comparative analysis of mitochondrial DNA, with a special focus on animal longevity.
Nucleic Acids Res. 2016; 44(D1):D1262-5.