Stats for order Didelphimorphia
Stats for total mtDNA (group size: 3 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Metachirus nudicaudatus |
34.4 |
65.6 |
3542 |
1919 |
5006 |
5415 |
3.0 |
Didelphis virginiana |
33.2 |
66.8 |
3613 |
2056 |
5381 |
6034 |
6.6 |
Monodelphis domestica |
35.0 |
65.0 |
3776 |
2201 |
5288 |
5814 |
5.1 |
Stats for total protein-coding genes (group size: 3 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Metachirus nudicaudatus |
34.4 |
65.6 |
2645 |
1249 |
3686 |
3744 |
3.0 |
Didelphis virginiana |
33.8 |
66.2 |
2588 |
1240 |
3695 |
3808 |
6.6 |
Monodelphis domestica |
36.1 |
63.9 |
2724 |
1361 |
3551 |
3689 |
5.1 |
Stats for D-loop (group size: 2 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Metachirus nudicaudatus |
28.5 |
71.5 |
86 |
43 |
159 |
165 |
3.0 |
Monodelphis domestica |
25.2 |
74.8 |
215 |
188 |
578 |
620 |
5.1 |
Stats for total tRNA-coding genes (group size: 3 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Metachirus nudicaudatus |
32.6 |
67.4 |
279 |
202 |
467 |
528 |
3.0 |
Didelphis virginiana |
32.2 |
67.8 |
279 |
205 |
478 |
540 |
6.6 |
Monodelphis domestica |
34.0 |
66.0 |
280 |
207 |
447 |
499 |
5.1 |
Stats for total rRNA-coding genes (group size: 3 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Metachirus nudicaudatus |
36.2 |
63.8 |
504 |
409 |
653 |
953 |
3.0 |
Didelphis virginiana |
35.5 |
64.5 |
492 |
404 |
659 |
966 |
6.6 |
Monodelphis domestica |
37.0 |
63.0 |
522 |
415 |
653 |
945 |
5.1 |
Stats for ATP6 (group size: 3 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Metachirus nudicaudatus |
33.2 |
66.8 |
164 |
62 |
231 |
224 |
3.0 |
Didelphis virginiana |
32.2 |
67.8 |
158 |
61 |
231 |
231 |
6.6 |
Monodelphis domestica |
35.5 |
64.5 |
176 |
66 |
210 |
229 |
5.1 |
Stats for ATP8 (group size: 3 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Metachirus nudicaudatus |
29.5 |
70.5 |
50 |
12 |
61 |
87 |
3.0 |
Didelphis virginiana |
30.0 |
70.0 |
52 |
11 |
59 |
88 |
6.6 |
Monodelphis domestica |
31.9 |
68.1 |
50 |
17 |
56 |
87 |
5.1 |
Stats for COX1 (group size: 3 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Metachirus nudicaudatus |
36.6 |
63.4 |
329 |
235 |
530 |
448 |
3.0 |
Didelphis virginiana |
36.6 |
63.4 |
322 |
242 |
530 |
448 |
6.6 |
Monodelphis domestica |
38.0 |
62.0 |
337 |
249 |
515 |
441 |
5.1 |
Stats for COX2 (group size: 3 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Metachirus nudicaudatus |
34.2 |
65.8 |
140 |
93 |
223 |
226 |
3.0 |
Didelphis virginiana |
34.6 |
65.4 |
146 |
90 |
217 |
229 |
6.6 |
Monodelphis domestica |
38.8 |
61.2 |
167 |
99 |
202 |
217 |
5.1 |
Stats for COX3 (group size: 3 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Metachirus nudicaudatus |
36.6 |
63.4 |
174 |
113 |
269 |
228 |
3.0 |
Didelphis virginiana |
37.2 |
62.8 |
180 |
112 |
262 |
230 |
6.6 |
Monodelphis domestica |
38.8 |
61.2 |
188 |
116 |
259 |
221 |
5.1 |
Stats for CYTB (group size: 3 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Metachirus nudicaudatus |
38.0 |
62.0 |
297 |
140 |
346 |
366 |
3.0 |
Didelphis virginiana |
37.0 |
63.0 |
284 |
141 |
354 |
370 |
6.6 |
Monodelphis domestica |
37.2 |
62.8 |
287 |
140 |
364 |
358 |
5.1 |
Stats for ND1 (group size: 3 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Metachirus nudicaudatus |
35.6 |
64.4 |
237 |
104 |
306 |
310 |
3.0 |
Didelphis virginiana |
34.8 |
65.2 |
230 |
103 |
308 |
316 |
6.6 |
Monodelphis domestica |
36.5 |
63.5 |
238 |
111 |
297 |
310 |
5.1 |
Stats for ND2 (group size: 3 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Metachirus nudicaudatus |
32.6 |
67.4 |
262 |
78 |
336 |
368 |
3.0 |
Didelphis virginiana |
32.5 |
67.5 |
261 |
78 |
328 |
377 |
6.6 |
Monodelphis domestica |
35.2 |
64.8 |
284 |
83 |
306 |
371 |
5.1 |
Stats for ND3 (group size: 3 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Metachirus nudicaudatus |
33.3 |
66.7 |
79 |
38 |
128 |
106 |
3.0 |
Didelphis virginiana |
32.7 |
67.3 |
79 |
35 |
124 |
111 |
6.6 |
Monodelphis domestica |
39.8 |
60.2 |
86 |
53 |
119 |
91 |
5.1 |
Stats for ND4 (group size: 3 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Metachirus nudicaudatus |
33.2 |
66.8 |
330 |
127 |
440 |
481 |
3.0 |
Didelphis virginiana |
31.7 |
68.3 |
312 |
125 |
457 |
484 |
6.6 |
Monodelphis domestica |
34.3 |
65.7 |
324 |
149 |
439 |
466 |
5.1 |
Stats for ND4L (group size: 3 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Metachirus nudicaudatus |
31.6 |
68.4 |
61 |
33 |
107 |
96 |
3.0 |
Didelphis virginiana |
33.3 |
66.7 |
68 |
31 |
104 |
94 |
6.6 |
Monodelphis domestica |
35.0 |
65.0 |
67 |
37 |
100 |
93 |
5.1 |
Stats for ND5 (group size: 3 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Metachirus nudicaudatus |
33.2 |
66.8 |
423 |
174 |
592 |
611 |
3.0 |
Didelphis virginiana |
31.6 |
68.4 |
397 |
174 |
603 |
635 |
6.6 |
Monodelphis domestica |
34.6 |
65.4 |
430 |
203 |
586 |
608 |
5.1 |
Stats for ND6 (group size: 3 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Metachirus nudicaudatus |
31.2 |
68.8 |
112 |
46 |
133 |
216 |
3.0 |
Didelphis virginiana |
30.6 |
69.4 |
113 |
42 |
134 |
218 |
6.6 |
Monodelphis domestica |
30.9 |
69.1 |
109 |
46 |
120 |
226 |
5.1 |
Stats for 12S rRNA gene (group size: 3 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Metachirus nudicaudatus |
37.4 |
62.6 |
193 |
162 |
244 |
351 |
3.0 |
Didelphis virginiana |
36.3 |
63.7 |
188 |
157 |
241 |
365 |
6.6 |
Monodelphis domestica |
38.9 |
61.1 |
210 |
162 |
233 |
351 |
5.1 |
Stats for 16S rRNA gene (group size: 3 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Metachirus nudicaudatus |
35.6 |
64.4 |
311 |
247 |
409 |
602 |
3.0 |
Didelphis virginiana |
35.1 |
64.9 |
304 |
247 |
418 |
601 |
6.6 |
Monodelphis domestica |
35.8 |
64.2 |
312 |
253 |
420 |
594 |
5.1 |
Contact: Vadim E. Fraifeld, MD, PhD
Head: Lab for the Biology of Aging,
The Shraga Segal Department of Microbiology, Immunology and Genetics,
Faculty of Health Sciences, Ben-Gurion University of the Negev
P.O. Box 653, Beer-Sheva 8410501, Israel
Email:
- How to cite us:
-
If you would like to cite this database please use:
Toren D, Barzilay T, Tacutu R, Lehmann G, Muradian KK, Fraifeld VE.
MitoAge: a database for comparative analysis of mitochondrial DNA, with a special focus on animal longevity.
Nucleic Acids Res. 2016; 44(D1):D1262-5.