Stats for order Pelecaniformes
Browsing families:
| Stats for total mtDNA (group size: 10 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 42.6 - 46.1% | 53.9 - 57.4% | 5159 - 6112 | 2319 - 2690 | 3928 - 5170 | 5094 - 6509 | 11.3 - 37.5 |
| Median | 44.9% | 55.3% | 5520 | 2520 | 4196 | 5720 | 25.4 |
| Average ± stdev | 44.7 ± 0.9% | 55.3 ± 0.9% | 5519 ± 301 | 2479 ± 134 | 4329 ± 367 | 5596 ± 412 | 24.9 ± 8.0 |
| Coefficient of variation | 0.02 | 0.02 | 0.05 | 0.05 | 0.08 | 0.07 | 0.32 |
| Pearson correlation coefficient with log10MLS |
0.67 | -0.67 | -0.34 | 0.02 | -0.46 | -0.53 | - |
| Pearson p-value (two tailed) |
3.27E-02 | 3.27E-02 | 3.35E-01 | 9.57E-01 | 1.78E-01 | 1.16E-01 | - |
| Stats for total protein-coding genes (group size: 10 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 45.2 - 47.2% | 52.8 - 54.8% | 3754 - 4080 | 1355 - 1448 | 2616 - 2781 | 3367 - 3715 | 11.3 - 37.5 |
| Median | 45.7% | 54.4% | 3863 | 1400 | 2750 | 3455 | 25.4 |
| Average ± stdev | 46.0 ± 0.7% | 54.0 ± 0.7% | 3856 ± 96 | 1398 ± 31 | 2717 ± 52 | 3454 ± 93 | 24.9 ± 8.0 |
| Coefficient of variation | 0.02 | 0.01 | 0.03 | 0.02 | 0.02 | 0.03 | 0.32 |
| Pearson correlation coefficient with log10MLS |
0.30 | -0.30 | -0.43 | 0.54 | -0.26 | -0.73 | - |
| Pearson p-value (two tailed) |
3.96E-01 | 3.96E-01 | 2.10E-01 | 1.06E-01 | 4.62E-01 | 1.68E-02 | - |
| Stats for D-loop (group size: 5 species) | |||||||
|---|---|---|---|---|---|---|---|
| Species | GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) |
| Stats for total tRNA-coding genes (group size: 10 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 40.9 - 43.7% | 56.3 - 59.1% | 377 - 462 | 258 - 291 | 376 - 438 | 495 - 574 | 11.3 - 37.5 |
| Median | 42.6% | 57.9% | 398 | 268 | 396 | 516 | 25.4 |
| Average ± stdev | 42.2 ± 0.9% | 57.8 ± 0.9% | 402 ± 23 | 267 ± 9 | 397 ± 17 | 520 ± 21 | 24.9 ± 8.0 |
| Coefficient of variation | 0.02 | 0.02 | 0.06 | 0.03 | 0.05 | 0.04 | 0.32 |
| Pearson correlation coefficient with log10MLS |
-0.33 | 0.33 | -0.57 | -0.44 | -0.24 | -0.41 | - |
| Pearson p-value (two tailed) |
3.55E-01 | 3.55E-01 | 8.32E-02 | 2.09E-01 | 5.10E-01 | 2.38E-01 | - |
| Stats for total rRNA-coding genes (group size: 10 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 44.8 - 46.8% | 53.2 - 55.2% | 661 - 719 | 483 - 504 | 517 - 571 | 831 - 858 | 11.3 - 37.5 |
| Median | 46.0% | 54.2% | 678 | 495 | 547 | 852 | 25.4 |
| Average ± stdev | 45.7 ± 0.7% | 54.3 ± 0.7% | 680 ± 15 | 494 ± 6 | 549 ± 14 | 847 ± 8 | 24.9 ± 8.0 |
| Coefficient of variation | 0.01 | 0.01 | 0.02 | 0.01 | 0.03 | 0.01 | 0.32 |
| Pearson correlation coefficient with log10MLS |
0.49 | -0.49 | 0.16 | 0.66 | -0.28 | -0.55 | - |
| Pearson p-value (two tailed) |
1.51E-01 | 1.51E-01 | 6.55E-01 | 3.77E-02 | 4.31E-01 | 1.02E-01 | - |
| Stats for ATP6 (group size: 10 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 42.7 - 47.7% | 52.3 - 57.3% | 227 - 255 | 61 - 74 | 153 - 176 | 202 - 216 | 11.3 - 37.5 |
| Median | 45.8% | 54.7% | 251 | 66 | 167 | 209 | 25.4 |
| Average ± stdev | 45.6 ± 1.7% | 54.4 ± 1.7% | 244 ± 8 | 66 ± 3 | 163 ± 7 | 208 ± 4 | 24.9 ± 8.0 |
| Coefficient of variation | 0.04 | 0.03 | 0.04 | 0.06 | 0.05 | 0.02 | 0.32 |
| Pearson correlation coefficient with log10MLS |
0.32 | -0.32 | 0.16 | 0.54 | -0.30 | -0.31 | - |
| Pearson p-value (two tailed) |
3.65E-01 | 3.65E-01 | 6.58E-01 | 1.04E-01 | 4.00E-01 | 3.79E-01 | - |
| Stats for ATP8 (group size: 10 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 39.3 - 47.0% | 53.0 - 60.7% | 58 - 69 | 8 - 13 | 35 - 43 | 52 - 61 | 11.3 - 37.5 |
| Median | 44.6% | 56.0% | 64 | 12 | 39 | 54 | 25.4 |
| Average ± stdev | 44.1 ± 2.2% | 55.9 ± 2.2% | 63 ± 3 | 10 ± 1 | 39 ± 2 | 54 ± 2 | 24.9 ± 8.0 |
| Coefficient of variation | 0.05 | 0.04 | 0.05 | 0.15 | 0.07 | 0.05 | 0.32 |
| Pearson correlation coefficient with log10MLS |
0.58 | -0.58 | 0.46 | 0.39 | -0.18 | -0.56 | - |
| Pearson p-value (two tailed) |
7.68E-02 | 7.68E-02 | 1.86E-01 | 2.66E-01 | 6.27E-01 | 9.40E-02 | - |
| Stats for COX1 (group size: 10 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 44.9 - 47.2% | 52.8 - 55.1% | 441 - 480 | 239 - 259 | 384 - 420 | 432 - 447 | 11.3 - 37.5 |
| Median | 46.1% | 54.1% | 460 | 254 | 399 | 438 | 25.4 |
| Average ± stdev | 46.0 ± 0.7% | 54.0 ± 0.7% | 461 ± 10 | 251 ± 5 | 398 ± 8 | 439 ± 5 | 24.9 ± 8.0 |
| Coefficient of variation | 0.02 | 0.01 | 0.02 | 0.02 | 0.02 | 0.01 | 0.32 |
| Pearson correlation coefficient with log10MLS |
-0.14 | 0.14 | -0.37 | 0.41 | 0.12 | 0.09 | - |
| Pearson p-value (two tailed) |
6.90E-01 | 6.90E-01 | 2.88E-01 | 2.36E-01 | 7.50E-01 | 8.03E-01 | - |
| Stats for COX2 (group size: 10 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 43.9 - 46.6% | 53.4 - 56.1% | 204 - 224 | 93 - 101 | 155 - 171 | 208 - 215 | 11.3 - 37.5 |
| Median | 45.6% | 54.7% | 215 | 97 | 160 | 213 | 25.4 |
| Average ± stdev | 45.3 ± 1.1% | 54.7 ± 1.1% | 212 ± 6 | 97 ± 2 | 161 ± 5 | 212 ± 2 | 24.9 ± 8.0 |
| Coefficient of variation | 0.02 | 0.02 | 0.03 | 0.02 | 0.04 | 0.01 | 0.32 |
| Pearson correlation coefficient with log10MLS |
-0.08 | 0.08 | -0.24 | 0.45 | 0.04 | 0.13 | - |
| Pearson p-value (two tailed) |
8.32E-01 | 8.32E-01 | 5.06E-01 | 1.89E-01 | 9.13E-01 | 7.15E-01 | - |
| Stats for COX3 (group size: 10 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 46.0 - 47.8% | 52.2 - 54.0% | 243 - 256 | 109 - 123 | 180 - 204 | 217 - 239 | 11.3 - 37.5 |
| Median | 46.6% | 53.8% | 249 | 118 | 196 | 224 | 25.4 |
| Average ± stdev | 46.7 ± 0.6% | 53.3 ± 0.6% | 248 ± 4 | 117 ± 3 | 193 ± 6 | 224 ± 5 | 24.9 ± 8.0 |
| Coefficient of variation | 0.01 | 0.01 | 0.02 | 0.03 | 0.03 | 0.02 | 0.32 |
| Pearson correlation coefficient with log10MLS |
0.34 | -0.34 | -0.12 | 0.57 | 0.35 | -0.68 | - |
| Pearson p-value (two tailed) |
3.32E-01 | 3.32E-01 | 7.46E-01 | 8.37E-02 | 3.18E-01 | 3.02E-02 | - |
| Stats for CYTB (group size: 10 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 47.0 - 49.8% | 50.2 - 53.0% | 396 - 424 | 134 - 148 | 261 - 290 | 304 - 329 | 11.3 - 37.5 |
| Median | 47.6% | 52.6% | 406 | 143 | 278 | 317 | 25.4 |
| Average ± stdev | 48.2 ± 1.2% | 51.8 ± 1.2% | 409 ± 9 | 140 ± 4 | 276 ± 8 | 316 ± 6 | 24.9 ± 8.0 |
| Coefficient of variation | 0.02 | 0.02 | 0.02 | 0.03 | 0.03 | 0.02 | 0.32 |
| Pearson correlation coefficient with log10MLS |
0.38 | -0.38 | 0.33 | 0.36 | -0.17 | -0.48 | - |
| Pearson p-value (two tailed) |
2.82E-01 | 2.82E-01 | 3.46E-01 | 3.10E-01 | 6.43E-01 | 1.59E-01 | - |
| Stats for ND1 (group size: 10 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 45.3 - 47.3% | 52.7 - 54.7% | 309 - 337 | 118 - 137 | 257 - 270 | 253 - 269 | 11.3 - 37.5 |
| Median | 46.3% | 53.8% | 326 | 134 | 262 | 264 | 25.4 |
| Average ± stdev | 46.3 ± 0.8% | 53.7 ± 0.8% | 322 ± 8 | 130 ± 5 | 263 ± 3 | 261 ± 4 | 24.9 ± 8.0 |
| Coefficient of variation | 0.02 | 0.01 | 0.03 | 0.05 | 0.01 | 0.02 | 0.32 |
| Pearson correlation coefficient with log10MLS |
0.42 | -0.42 | -0.16 | 0.72 | -0.08 | -0.53 | - |
| Pearson p-value (two tailed) |
2.30E-01 | 2.30E-01 | 6.57E-01 | 1.90E-02 | 8.24E-01 | 1.15E-01 | - |
| Stats for ND2 (group size: 10 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 41.6 - 45.3% | 54.7 - 58.4% | 337 - 365 | 93 - 115 | 238 - 265 | 324 - 345 | 11.3 - 37.5 |
| Median | 43.7% | 56.8% | 351 | 105 | 259 | 335 | 25.4 |
| Average ± stdev | 43.4 ± 1.3% | 56.6 ± 1.3% | 349 ± 9 | 101 ± 6 | 254 ± 9 | 334 ± 7 | 24.9 ± 8.0 |
| Coefficient of variation | 0.03 | 0.02 | 0.03 | 0.07 | 0.04 | 0.02 | 0.32 |
| Pearson correlation coefficient with log10MLS |
0.30 | -0.30 | -0.10 | 0.72 | 0.11 | -0.66 | - |
| Pearson p-value (two tailed) |
3.92E-01 | 3.92E-01 | 7.83E-01 | 1.87E-02 | 7.67E-01 | 3.74E-02 | - |
| Stats for ND3 (group size: 10 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 43.8 - 47.4% | 52.6 - 56.2% | 116 - 127 | 37 - 44 | 88 - 100 | 91 - 102 | 11.3 - 37.5 |
| Median | 46.3% | 54.0% | 119 | 41 | 94 | 96 | 25.4 |
| Average ± stdev | 45.9 ± 1.4% | 54.1 ± 1.4% | 120 ± 3 | 40 ± 2 | 94 ± 3 | 96 ± 3 | 24.9 ± 8.0 |
| Coefficient of variation | 0.03 | 0.03 | 0.03 | 0.05 | 0.04 | 0.04 | 0.32 |
| Pearson correlation coefficient with log10MLS |
-0.35 | 0.35 | -0.47 | 0.11 | 0.15 | 0.29 | - |
| Pearson p-value (two tailed) |
3.14E-01 | 3.14E-01 | 1.65E-01 | 7.52E-01 | 6.80E-01 | 4.17E-01 | - |
| Stats for ND4 (group size: 10 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 44.6 - 46.7% | 53.3 - 55.4% | 468 - 499 | 133 - 151 | 311 - 339 | 410 - 434 | 11.3 - 37.5 |
| Median | 45.0% | 55.0% | 486 | 144 | 332 | 425 | 25.4 |
| Average ± stdev | 45.4 ± 0.8% | 54.6 ± 0.8% | 483 ± 10 | 142 ± 6 | 327 ± 9 | 425 ± 7 | 24.9 ± 8.0 |
| Coefficient of variation | 0.02 | 0.02 | 0.02 | 0.04 | 0.03 | 0.02 | 0.32 |
| Pearson correlation coefficient with log10MLS |
0.34 | -0.34 | 0.08 | 0.46 | -0.32 | -0.08 | - |
| Pearson p-value (two tailed) |
3.42E-01 | 3.42E-01 | 8.27E-01 | 1.78E-01 | 3.63E-01 | 8.30E-01 | - |
| Stats for ND4L (group size: 10 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 45.1 - 49.8% | 50.2 - 54.9% | 92 - 108 | 34 - 42 | 66 - 85 | 78 - 89 | 11.3 - 37.5 |
| Median | 47.5% | 52.5% | 105 | 38 | 70 | 87 | 25.4 |
| Average ± stdev | 47.6 ± 1.5% | 52.4 ± 1.5% | 103 ± 4 | 37 ± 2 | 71 ± 5 | 84 ± 3 | 24.9 ± 8.0 |
| Coefficient of variation | 0.03 | 0.03 | 0.04 | 0.07 | 0.07 | 0.05 | 0.32 |
| Pearson correlation coefficient with log10MLS |
-0.33 | 0.33 | -0.48 | 0.27 | 0.48 | -0.29 | - |
| Pearson p-value (two tailed) |
3.47E-01 | 3.47E-01 | 1.60E-01 | 4.52E-01 | 1.56E-01 | 4.22E-01 | - |
| Stats for ND5 (group size: 10 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 44.2 - 46.7% | 53.3 - 55.8% | 600 - 643 | 191 - 215 | 394 - 427 | 560 - 595 | 11.3 - 37.5 |
| Median | 45.6% | 55.0% | 625 | 206 | 414 | 581 | 25.4 |
| Average ± stdev | 45.5 ± 0.9% | 54.5 ± 0.9% | 621 ± 14 | 204 ± 7 | 411 ± 10 | 578 ± 10 | 24.9 ± 8.0 |
| Coefficient of variation | 0.02 | 0.02 | 0.02 | 0.04 | 0.03 | 0.02 | 0.32 |
| Pearson correlation coefficient with log10MLS |
0.37 | -0.37 | 0.07 | 0.61 | 0.11 | -0.68 | - |
| Pearson p-value (two tailed) |
2.97E-01 | 2.97E-01 | 8.39E-01 | 5.88E-02 | 7.65E-01 | 3.04E-02 | - |
| Stats for ND6 (group size: 10 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 44.6 - 53.4% | 46.6 - 55.4% | 182 - 219 | 46 - 64 | 50 - 69 | 179 - 220 | 11.3 - 37.5 |
| Median | 48.1% | 52.3% | 200 | 51 | 64 | 209 | 25.4 |
| Average ± stdev | 48.6 ± 2.6% | 51.4 ± 2.6% | 198 ± 11 | 52 ± 5 | 60 ± 6 | 205 ± 11 | 24.9 ± 8.0 |
| Coefficient of variation | 0.05 | 0.05 | 0.06 | 0.11 | 0.10 | 0.06 | 0.32 |
| Pearson correlation coefficient with log10MLS |
0.13 | -0.13 | 0.18 | -0.01 | -0.23 | -0.00 | - |
| Pearson p-value (two tailed) |
7.22E-01 | 7.22E-01 | 6.20E-01 | 9.81E-01 | 5.31E-01 | 9.97E-01 | - |
| Stats for 12S rRNA gene (group size: 10 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 46.8 - 49.2% | 50.8 - 53.2% | 254 - 282 | 192 - 203 | 185 - 217 | 302 - 314 | 11.3 - 37.5 |
| Median | 47.8% | 52.4% | 264 | 201 | 204 | 308 | 25.4 |
| Average ± stdev | 47.6 ± 0.7% | 52.4 ± 0.7% | 263 ± 7 | 199 ± 3 | 202 ± 8 | 307 ± 4 | 24.9 ± 8.0 |
| Coefficient of variation | 0.02 | 0.01 | 0.03 | 0.02 | 0.04 | 0.01 | 0.32 |
| Pearson correlation coefficient with log10MLS |
0.28 | -0.28 | -0.02 | 0.49 | -0.12 | -0.30 | - |
| Pearson p-value (two tailed) |
4.27E-01 | 4.27E-01 | 9.47E-01 | 1.52E-01 | 7.51E-01 | 3.93E-01 | - |
| Stats for 16S rRNA gene (group size: 10 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 43.6 - 45.3% | 54.7 - 56.4% | 406 - 437 | 289 - 303 | 332 - 360 | 525 - 550 | 11.3 - 37.5 |
| Median | 44.9% | 55.5% | 416 | 294 | 350 | 544 | 25.4 |
| Average ± stdev | 44.5 ± 0.7% | 55.5 ± 0.7% | 416 ± 9 | 294 ± 4 | 346 ± 7 | 539 ± 8 | 24.9 ± 8.0 |
| Coefficient of variation | 0.02 | 0.01 | 0.02 | 0.02 | 0.02 | 0.02 | 0.32 |
| Pearson correlation coefficient with log10MLS |
0.54 | -0.54 | 0.29 | 0.57 | -0.40 | -0.38 | - |
| Pearson p-value (two tailed) |
1.09E-01 | 1.09E-01 | 4.17E-01 | 8.78E-02 | 2.51E-01 | 2.83E-01 | - |
Contact: Vadim E. Fraifeld, MD, PhD
Head: Lab for the Biology of Aging, The Shraga Segal Department of Microbiology, Immunology and Genetics, Faculty of Health Sciences, Ben-Gurion University of the Negev
P.O. Box 653, Beer-Sheva 8410501, Israel
Email:
Head: Lab for the Biology of Aging, The Shraga Segal Department of Microbiology, Immunology and Genetics, Faculty of Health Sciences, Ben-Gurion University of the Negev
P.O. Box 653, Beer-Sheva 8410501, Israel
Email:
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If you would like to cite this database please use:
Toren D, Barzilay T, Tacutu R, Lehmann G, Muradian KK, Fraifeld VE. MitoAge: a database for comparative analysis of mitochondrial DNA, with a special focus on animal longevity. Nucleic Acids Res. 2016; 44(D1):D1262-5.
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