Stats for order Anseriformes
Browsing families:
Anatidae (17)
| Stats for total mtDNA (group size: 17 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 47.1 - 49.1% | 50.9 - 52.9% | 5314 - 5625 | 2527 - 2695 | 3672 - 3979 | 4777 - 5231 | 8.8 - 70.0 |
| Median | 48.0% | 52.0% | 5418 | 2586 | 3730 | 4922 | 27.1 |
| Average ± stdev | 47.9 ± 0.7% | 52.1 ± 0.7% | 5417 ± 69 | 2592 ± 49 | 3752 ± 74 | 4949 ± 112 | 30.2 ± 14.0 |
| Coefficient of variation | 0.01 | 0.01 | 0.01 | 0.02 | 0.02 | 0.02 | 0.46 |
| Pearson correlation coefficient with log10MLS |
-0.24 | 0.24 | -0.13 | 0.01 | 0.20 | 0.26 | - |
| Pearson p-value (two tailed) |
3.57E-01 | 3.57E-01 | 6.25E-01 | 9.60E-01 | 4.50E-01 | 3.06E-01 | - |
| Stats for total protein-coding genes (group size: 17 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 47.8 - 50.4% | 49.6 - 52.2% | 3856 - 4145 | 1573 - 1720 | 2513 - 2779 | 3136 - 3520 | 8.8 - 70.0 |
| Median | 48.8% | 51.2% | 3990 | 1634 | 2561 | 3253 | 27.1 |
| Average ± stdev | 48.9 ± 0.8% | 51.1 ± 0.8% | 3962 ± 74 | 1630 ± 45 | 2570 ± 60 | 3267 ± 89 | 30.2 ± 14.0 |
| Coefficient of variation | 0.02 | 0.02 | 0.02 | 0.03 | 0.02 | 0.03 | 0.46 |
| Pearson correlation coefficient with log10MLS |
-0.16 | 0.16 | -0.17 | 0.01 | 0.03 | 0.18 | - |
| Pearson p-value (two tailed) |
5.34E-01 | 5.34E-01 | 5.05E-01 | 9.64E-01 | 9.03E-01 | 4.99E-01 | - |
| Stats for D-loop (group size: 11 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 46.3 - 47.5% | 52.5 - 53.7% | 318 - 383 | 161 - 179 | 258 - 314 | 273 - 340 | 10.4 - 70.0 |
| Median | 46.8% | 53.2% | 340 | 168 | 275 | 296 | 26.5 |
| Average ± stdev | 46.8 ± 0.4% | 53.2 ± 0.4% | 347 ± 24 | 168 ± 5 | 277 ± 15 | 309 ± 23 | 28.8 ± 13.9 |
| Coefficient of variation | 0.01 | 0.01 | 0.07 | 0.03 | 0.06 | 0.08 | 0.48 |
| Pearson correlation coefficient with log10MLS |
-0.39 | 0.39 | 0.46 | 0.12 | 0.23 | 0.55 | - |
| Pearson p-value (two tailed) |
2.41E-01 | 2.41E-01 | 1.59E-01 | 7.29E-01 | 5.01E-01 | 8.05E-02 | - |
| Stats for total tRNA-coding genes (group size: 17 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 42.2 - 44.1% | 55.9 - 57.8% | 386 - 402 | 261 - 280 | 370 - 381 | 487 - 511 | 8.8 - 70.0 |
| Median | 43.4% | 56.6% | 395 | 269 | 377 | 500 | 27.1 |
| Average ± stdev | 43.2 ± 0.6% | 56.8 ± 0.6% | 394 ± 4 | 270 ± 6 | 375 ± 3 | 499 ± 7 | 30.2 ± 14.0 |
| Coefficient of variation | 0.01 | 0.01 | 0.01 | 0.02 | 0.01 | 0.02 | 0.46 |
| Pearson correlation coefficient with log10MLS |
-0.54 | 0.54 | -0.49 | -0.39 | 0.27 | 0.52 | - |
| Pearson p-value (two tailed) |
2.66E-02 | 2.66E-02 | 4.35E-02 | 1.18E-01 | 3.02E-01 | 3.26E-02 | - |
| Stats for total rRNA-coding genes (group size: 17 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 46.0 - 47.1% | 52.9 - 54.0% | 574 - 699 | 464 - 532 | 468 - 530 | 749 - 879 | 8.8 - 70.0 |
| Median | 46.8% | 53.2% | 689 | 524 | 516 | 859 | 27.1 |
| Average ± stdev | 46.7 ± 0.2% | 53.3 ± 0.2% | 682 ± 27 | 520 ± 15 | 513 ± 14 | 856 ± 27 | 30.2 ± 14.0 |
| Coefficient of variation | 0.01 | 0.00 | 0.04 | 0.03 | 0.03 | 0.03 | 0.46 |
| Pearson correlation coefficient with log10MLS |
-0.18 | 0.18 | -0.08 | 0.15 | 0.32 | -0.08 | - |
| Pearson p-value (two tailed) |
4.81E-01 | 4.81E-01 | 7.51E-01 | 5.57E-01 | 2.07E-01 | 7.51E-01 | - |
| Stats for ATP6 (group size: 17 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 45.8 - 50.3% | 49.7 - 54.2% | 238 - 260 | 63 - 89 | 150 - 177 | 184 - 212 | 8.8 - 70.0 |
| Median | 48.2% | 51.8% | 253 | 78 | 159 | 195 | 27.1 |
| Average ± stdev | 47.9 ± 1.4% | 52.1 ± 1.4% | 250 ± 6 | 76 ± 6 | 160 ± 6 | 195 ± 6 | 30.2 ± 14.0 |
| Coefficient of variation | 0.03 | 0.03 | 0.03 | 0.09 | 0.04 | 0.03 | 0.46 |
| Pearson correlation coefficient with log10MLS |
-0.03 | 0.03 | -0.05 | 0.01 | 0.17 | -0.15 | - |
| Pearson p-value (two tailed) |
9.19E-01 | 9.19E-01 | 8.58E-01 | 9.75E-01 | 5.05E-01 | 5.72E-01 | - |
| Stats for ATP8 (group size: 17 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 42.9 - 50.6% | 49.4 - 57.1% | 59 - 69 | 11 - 16 | 29 - 38 | 52 - 61 | 8.8 - 70.0 |
| Median | 45.8% | 54.2% | 65 | 13 | 32 | 58 | 27.1 |
| Average ± stdev | 46.3 ± 2.2% | 53.7 ± 2.2% | 64 ± 2 | 13 ± 1 | 32 ± 2 | 57 ± 2 | 30.2 ± 14.0 |
| Coefficient of variation | 0.05 | 0.04 | 0.04 | 0.12 | 0.07 | 0.04 | 0.46 |
| Pearson correlation coefficient with log10MLS |
-0.72 | 0.72 | -0.62 | -0.50 | 0.64 | 0.50 | - |
| Pearson p-value (two tailed) |
1.20E-03 | 1.20E-03 | 7.94E-03 | 3.97E-02 | 5.71E-03 | 4.04E-02 | - |
| Stats for COX1 (group size: 17 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 47.6 - 51.1% | 48.9 - 52.4% | 486 - 518 | 252 - 281 | 366 - 392 | 391 - 423 | 8.8 - 70.0 |
| Median | 49.7% | 50.3% | 505 | 265 | 375 | 414 | 27.1 |
| Average ± stdev | 49.4 ± 1.0% | 50.6 ± 1.0% | 501 ± 9 | 265 ± 7 | 375 ± 6 | 408 ± 10 | 30.2 ± 14.0 |
| Coefficient of variation | 0.02 | 0.02 | 0.02 | 0.03 | 0.02 | 0.02 | 0.46 |
| Pearson correlation coefficient with log10MLS |
0.10 | -0.10 | 0.01 | 0.21 | -0.38 | 0.09 | - |
| Pearson p-value (two tailed) |
6.97E-01 | 6.97E-01 | 9.78E-01 | 4.25E-01 | 1.30E-01 | 7.22E-01 | - |
| Stats for COX2 (group size: 17 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 44.5 - 50.2% | 49.8 - 55.5% | 209 - 230 | 97 - 120 | 149 - 177 | 190 - 204 | 8.8 - 70.0 |
| Median | 49.2% | 50.8% | 224 | 113 | 153 | 195 | 27.1 |
| Average ± stdev | 49.0 ± 1.2% | 51.0 ± 1.2% | 223 ± 4 | 112 ± 4 | 155 ± 5 | 195 ± 3 | 30.2 ± 14.0 |
| Coefficient of variation | 0.03 | 0.02 | 0.02 | 0.04 | 0.04 | 0.02 | 0.46 |
| Pearson correlation coefficient with log10MLS |
0.48 | -0.48 | 0.20 | 0.61 | -0.38 | -0.51 | - |
| Pearson p-value (two tailed) |
5.16E-02 | 5.16E-02 | 4.50E-01 | 9.48E-03 | 1.31E-01 | 3.70E-02 | - |
| Stats for COX3 (group size: 17 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 49.1 - 51.4% | 48.6 - 50.9% | 257 - 274 | 124 - 130 | 175 - 192 | 202 - 219 | 8.8 - 70.0 |
| Median | 50.0% | 50.0% | 266 | 128 | 181 | 211 | 27.1 |
| Average ± stdev | 50.1 ± 0.8% | 49.9 ± 0.8% | 265 ± 5 | 127 ± 1 | 181 ± 4 | 210 ± 5 | 30.2 ± 14.0 |
| Coefficient of variation | 0.02 | 0.02 | 0.02 | 0.02 | 0.02 | 0.02 | 0.46 |
| Pearson correlation coefficient with log10MLS |
-0.07 | 0.07 | -0.09 | 0.03 | -0.25 | 0.30 | - |
| Pearson p-value (two tailed) |
7.94E-01 | 7.94E-01 | 7.25E-01 | 9.07E-01 | 3.30E-01 | 2.43E-01 | - |
| Stats for CYTB (group size: 17 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 48.6 - 50.6% | 49.4 - 51.4% | 395 - 670 | 155 - 264 | 259 - 445 | 295 - 541 | 8.8 - 70.0 |
| Median | 49.2% | 50.8% | 402 | 162 | 270 | 307 | 27.1 |
| Average ± stdev | 49.5 ± 0.6% | 50.5 ± 0.6% | 418 ± 63 | 168 ± 24 | 279 ± 41 | 321 ± 55 | 30.2 ± 14.0 |
| Coefficient of variation | 0.01 | 0.01 | 0.15 | 0.14 | 0.15 | 0.17 | 0.46 |
| Pearson correlation coefficient with log10MLS |
-0.39 | 0.39 | 0.02 | -0.05 | 0.02 | 0.09 | - |
| Pearson p-value (two tailed) |
1.23E-01 | 1.23E-01 | 9.35E-01 | 8.39E-01 | 9.41E-01 | 7.37E-01 | - |
| Stats for ND1 (group size: 17 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 46.8 - 50.6% | 49.4 - 53.2% | 304 - 339 | 145 - 163 | 235 - 257 | 247 - 271 | 8.8 - 70.0 |
| Median | 49.3% | 50.7% | 334 | 154 | 241 | 253 | 27.1 |
| Average ± stdev | 49.1 ± 1.3% | 50.9 ± 1.3% | 326 ± 11 | 153 ± 4 | 242 ± 5 | 255 ± 7 | 30.2 ± 14.0 |
| Coefficient of variation | 0.03 | 0.03 | 0.04 | 0.03 | 0.02 | 0.03 | 0.46 |
| Pearson correlation coefficient with log10MLS |
-0.28 | 0.28 | -0.39 | 0.23 | 0.31 | 0.24 | - |
| Pearson p-value (two tailed) |
2.73E-01 | 2.73E-01 | 1.19E-01 | 3.72E-01 | 2.21E-01 | 3.44E-01 | - |
| Stats for ND2 (group size: 17 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 46.7 - 50.3% | 49.7 - 53.3% | 364 - 387 | 115 - 138 | 216 - 234 | 300 - 321 | 8.8 - 70.0 |
| Median | 48.6% | 51.4% | 374 | 131 | 228 | 309 | 27.1 |
| Average ± stdev | 48.5 ± 1.2% | 51.5 ± 1.2% | 375 ± 7 | 128 ± 6 | 226 ± 6 | 309 ± 7 | 30.2 ± 14.0 |
| Coefficient of variation | 0.03 | 0.02 | 0.02 | 0.05 | 0.03 | 0.02 | 0.46 |
| Pearson correlation coefficient with log10MLS |
-0.23 | 0.23 | -0.19 | -0.22 | 0.22 | 0.23 | - |
| Pearson p-value (two tailed) |
3.70E-01 | 3.70E-01 | 4.63E-01 | 4.01E-01 | 4.00E-01 | 3.82E-01 | - |
| Stats for ND3 (group size: 17 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 48.3 - 52.0% | 48.0 - 51.7% | 116 - 125 | 51 - 60 | 83 - 94 | 83 - 94 | 8.8 - 70.0 |
| Median | 50.7% | 49.3% | 121 | 56 | 86 | 88 | 27.1 |
| Average ± stdev | 50.3 ± 1.0% | 49.7 ± 1.0% | 121 ± 2 | 55 ± 2 | 86 ± 2 | 88 ± 2 | 30.2 ± 14.0 |
| Coefficient of variation | 0.02 | 0.02 | 0.02 | 0.04 | 0.03 | 0.03 | 0.46 |
| Pearson correlation coefficient with log10MLS |
0.53 | -0.53 | 0.10 | 0.74 | 0.10 | -0.84 | - |
| Pearson p-value (two tailed) |
2.93E-02 | 2.93E-02 | 7.07E-01 | 7.19E-04 | 7.08E-01 | 2.75E-05 | - |
| Stats for ND4 (group size: 17 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 46.1 - 49.4% | 50.6 - 53.9% | 472 - 497 | 156 - 188 | 308 - 325 | 384 - 422 | 8.8 - 70.0 |
| Median | 47.7% | 52.3% | 489 | 167 | 316 | 406 | 27.1 |
| Average ± stdev | 47.5 ± 1.0% | 52.5 ± 1.0% | 486 ± 7 | 168 ± 7 | 316 ± 4 | 406 ± 10 | 30.2 ± 14.0 |
| Coefficient of variation | 0.02 | 0.02 | 0.02 | 0.04 | 0.01 | 0.03 | 0.46 |
| Pearson correlation coefficient with log10MLS |
-0.37 | 0.37 | -0.23 | -0.42 | -0.18 | 0.53 | - |
| Pearson p-value (two tailed) |
1.44E-01 | 1.44E-01 | 3.77E-01 | 9.46E-02 | 4.95E-01 | 2.71E-02 | - |
| Stats for ND4L (group size: 17 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 47.1 - 54.2% | 45.8 - 52.9% | 96 - 106 | 43 - 55 | 67 - 78 | 69 - 79 | 8.8 - 70.0 |
| Median | 50.2% | 49.8% | 101 | 48 | 72 | 76 | 27.1 |
| Average ± stdev | 50.3 ± 2.1% | 49.7 ± 2.1% | 100 ± 2 | 48 ± 3 | 72 ± 3 | 75 ± 2 | 30.2 ± 14.0 |
| Coefficient of variation | 0.04 | 0.04 | 0.03 | 0.07 | 0.05 | 0.04 | 0.46 |
| Pearson correlation coefficient with log10MLS |
-0.28 | 0.28 | -0.27 | -0.27 | 0.31 | 0.20 | - |
| Pearson p-value (two tailed) |
2.73E-01 | 2.73E-01 | 2.94E-01 | 2.95E-01 | 2.19E-01 | 4.35E-01 | - |
| Stats for ND5 (group size: 17 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 46.6 - 50.3% | 49.7 - 53.4% | 606 - 655 | 238 - 266 | 378 - 404 | 519 - 575 | 8.8 - 70.0 |
| Median | 48.5% | 51.5% | 634 | 251 | 390 | 548 | 27.1 |
| Average ± stdev | 48.3 ± 1.2% | 51.7 ± 1.2% | 630 ± 17 | 249 ± 6 | 391 ± 5 | 549 ± 16 | 30.2 ± 14.0 |
| Coefficient of variation | 0.02 | 0.02 | 0.03 | 0.03 | 0.01 | 0.03 | 0.46 |
| Pearson correlation coefficient with log10MLS |
-0.26 | 0.26 | -0.35 | 0.01 | 0.24 | 0.21 | - |
| Pearson p-value (two tailed) |
3.09E-01 | 3.09E-01 | 1.65E-01 | 9.77E-01 | 3.56E-01 | 4.13E-01 | - |
| Stats for ND6 (group size: 17 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 49.0 - 52.6% | 47.4 - 51.0% | 195 - 206 | 57 - 71 | 51 - 61 | 194 - 210 | 8.8 - 70.0 |
| Median | 50.6% | 49.4% | 201 | 62 | 54 | 202 | 27.1 |
| Average ± stdev | 50.6 ± 0.9% | 49.4 ± 0.9% | 200 ± 3 | 62 ± 3 | 54 ± 3 | 202 ± 4 | 30.2 ± 14.0 |
| Coefficient of variation | 0.02 | 0.02 | 0.02 | 0.05 | 0.06 | 0.02 | 0.46 |
| Pearson correlation coefficient with log10MLS |
0.49 | -0.49 | 0.46 | 0.23 | -0.21 | -0.32 | - |
| Pearson p-value (two tailed) |
4.70E-02 | 4.70E-02 | 6.51E-02 | 3.68E-01 | 4.29E-01 | 2.06E-01 | - |
| Stats for 12S rRNA gene (group size: 17 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 47.5 - 49.6% | 50.4 - 52.5% | 260 - 284 | 197 - 221 | 183 - 202 | 303 - 322 | 8.8 - 70.0 |
| Median | 48.4% | 51.6% | 277 | 202 | 194 | 315 | 27.1 |
| Average ± stdev | 48.6 ± 0.6% | 51.4 ± 0.6% | 276 ± 5 | 203 ± 5 | 192 ± 6 | 314 ± 4 | 30.2 ± 14.0 |
| Coefficient of variation | 0.01 | 0.01 | 0.02 | 0.03 | 0.03 | 0.01 | 0.46 |
| Pearson correlation coefficient with log10MLS |
-0.29 | 0.29 | -0.32 | -0.03 | 0.32 | -0.05 | - |
| Pearson p-value (two tailed) |
2.53E-01 | 2.53E-01 | 2.15E-01 | 8.99E-01 | 2.18E-01 | 8.47E-01 | - |
| Stats for 16S rRNA gene (group size: 17 species) | |||||||
|---|---|---|---|---|---|---|---|
| GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) | |
| Range (min-max) | 43.8 - 46.3% | 53.7 - 56.2% | 314 - 419 | 243 - 328 | 268 - 334 | 446 - 559 | 8.8 - 70.0 |
| Median | 45.5% | 54.5% | 413 | 323 | 325 | 547 | 27.1 |
| Average ± stdev | 45.5 ± 0.5% | 54.5 ± 0.5% | 405 ± 23 | 316 ± 18 | 321 ± 14 | 541 ± 24 | 30.2 ± 14.0 |
| Coefficient of variation | 0.01 | 0.01 | 0.06 | 0.06 | 0.04 | 0.05 | 0.46 |
| Pearson correlation coefficient with log10MLS |
0.09 | -0.09 | -0.03 | 0.13 | 0.20 | -0.08 | - |
| Pearson p-value (two tailed) |
7.28E-01 | 7.28E-01 | 9.24E-01 | 6.10E-01 | 4.39E-01 | 7.46E-01 | - |
Contact: Vadim E. Fraifeld, MD, PhD
Head: Lab for the Biology of Aging, The Shraga Segal Department of Microbiology, Immunology and Genetics, Faculty of Health Sciences, Ben-Gurion University of the Negev
P.O. Box 653, Beer-Sheva 8410501, Israel
Email:
Head: Lab for the Biology of Aging, The Shraga Segal Department of Microbiology, Immunology and Genetics, Faculty of Health Sciences, Ben-Gurion University of the Negev
P.O. Box 653, Beer-Sheva 8410501, Israel
Email:
- How to cite us:
-
If you would like to cite this database please use:
Toren D, Barzilay T, Tacutu R, Lehmann G, Muradian KK, Fraifeld VE. MitoAge: a database for comparative analysis of mitochondrial DNA, with a special focus on animal longevity. Nucleic Acids Res. 2016; 44(D1):D1262-5.
-
Quick links:
- Terms of use
- User guide
- Frequent questions
- Glossary & definitions