Stats for family Kinosternidae
Stats for total mtDNA (group size: 2 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Kinosternon leucostomum |
35.8 |
64.2 |
3937 |
1992 |
4674 |
5956 |
19.2 |
Sternotherus carinatus |
36.9 |
63.1 |
4118 |
1986 |
4520 |
5930 |
29.3 |
Stats for total protein-coding genes (group size: 2 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Kinosternon leucostomum |
35.7 |
64.3 |
2825 |
1228 |
3283 |
4021 |
19.2 |
Sternotherus carinatus |
36.9 |
63.1 |
2963 |
1220 |
3164 |
3999 |
29.3 |
Stats for D-loop (group size: 2 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Kinosternon leucostomum |
33.4 |
66.6 |
226 |
110 |
330 |
340 |
19.2 |
Sternotherus carinatus |
33.8 |
66.2 |
226 |
113 |
333 |
331 |
29.3 |
Stats for total tRNA-coding genes (group size: 2 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Kinosternon leucostomum |
37.0 |
63.0 |
338 |
233 |
414 |
557 |
19.2 |
Sternotherus carinatus |
37.6 |
62.4 |
347 |
234 |
406 |
560 |
29.3 |
Stats for total rRNA-coding genes (group size: 2 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Kinosternon leucostomum |
36.6 |
63.4 |
526 |
409 |
618 |
1004 |
19.2 |
Sternotherus carinatus |
37.7 |
62.3 |
558 |
408 |
591 |
1005 |
29.3 |
Stats for ATP6 (group size: 2 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Kinosternon leucostomum |
35.5 |
64.5 |
182 |
61 |
200 |
241 |
19.2 |
Sternotherus carinatus |
35.5 |
64.5 |
185 |
57 |
193 |
246 |
29.3 |
Stats for ATP8 (group size: 2 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Kinosternon leucostomum |
31.7 |
68.3 |
43 |
14 |
56 |
67 |
19.2 |
Sternotherus carinatus |
32.2 |
67.8 |
49 |
8 |
49 |
71 |
29.3 |
Stats for COX1 (group size: 2 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Kinosternon leucostomum |
38.0 |
62.0 |
348 |
240 |
493 |
468 |
19.2 |
Sternotherus carinatus |
38.3 |
61.7 |
354 |
239 |
486 |
470 |
29.3 |
Stats for COX2 (group size: 2 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Kinosternon leucostomum |
34.7 |
65.3 |
153 |
83 |
198 |
247 |
19.2 |
Sternotherus carinatus |
35.2 |
64.8 |
153 |
87 |
194 |
247 |
29.3 |
Stats for COX3 (group size: 2 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Kinosternon leucostomum |
39.2 |
60.8 |
197 |
110 |
228 |
249 |
19.2 |
Sternotherus carinatus |
40.7 |
59.3 |
209 |
110 |
214 |
251 |
29.3 |
Stats for CYTB (group size: 2 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Kinosternon leucostomum |
37.7 |
62.3 |
301 |
129 |
332 |
379 |
19.2 |
Sternotherus carinatus |
40.0 |
60.0 |
325 |
131 |
317 |
368 |
29.3 |
Stats for ND1 (group size: 2 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Kinosternon leucostomum |
36.9 |
63.1 |
256 |
101 |
287 |
324 |
19.2 |
Sternotherus carinatus |
36.4 |
63.6 |
252 |
100 |
290 |
326 |
29.3 |
Stats for ND2 (group size: 2 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Kinosternon leucostomum |
33.8 |
66.2 |
257 |
94 |
289 |
399 |
19.2 |
Sternotherus carinatus |
35.8 |
64.2 |
276 |
96 |
267 |
400 |
29.3 |
Stats for ND3 (group size: 2 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Kinosternon leucostomum |
35.0 |
65.0 |
88 |
35 |
105 |
123 |
19.2 |
Sternotherus carinatus |
34.8 |
65.2 |
86 |
36 |
107 |
122 |
29.3 |
Stats for ND4 (group size: 2 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Kinosternon leucostomum |
35.0 |
65.0 |
348 |
131 |
384 |
505 |
19.2 |
Sternotherus carinatus |
36.2 |
63.8 |
366 |
130 |
376 |
500 |
29.3 |
Stats for ND4L (group size: 2 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Kinosternon leucostomum |
35.0 |
65.0 |
78 |
26 |
89 |
104 |
19.2 |
Sternotherus carinatus |
38.4 |
61.6 |
86 |
28 |
84 |
99 |
29.3 |
Stats for ND5 (group size: 2 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Kinosternon leucostomum |
34.5 |
65.5 |
447 |
178 |
518 |
666 |
19.2 |
Sternotherus carinatus |
36.0 |
64.0 |
475 |
174 |
503 |
651 |
29.3 |
Stats for ND6 (group size: 2 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Kinosternon leucostomum |
29.9 |
70.1 |
130 |
27 |
108 |
260 |
19.2 |
Sternotherus carinatus |
33.7 |
66.3 |
149 |
28 |
90 |
258 |
29.3 |
Stats for 12S rRNA gene (group size: 2 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Kinosternon leucostomum |
38.6 |
61.4 |
211 |
160 |
229 |
360 |
19.2 |
Sternotherus carinatus |
39.1 |
60.9 |
221 |
156 |
220 |
367 |
29.3 |
Stats for 16S rRNA gene (group size: 2 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Kinosternon leucostomum |
35.3 |
64.7 |
315 |
249 |
389 |
644 |
19.2 |
Sternotherus carinatus |
36.9 |
63.1 |
337 |
252 |
371 |
638 |
29.3 |
Contact: Vadim E. Fraifeld, MD, PhD
Head: Lab for the Biology of Aging,
The Shraga Segal Department of Microbiology, Immunology and Genetics,
Faculty of Health Sciences, Ben-Gurion University of the Negev
P.O. Box 653, Beer-Sheva 8410501, Israel
Email:
- How to cite us:
-
If you would like to cite this database please use:
Toren D, Barzilay T, Tacutu R, Lehmann G, Muradian KK, Fraifeld VE.
MitoAge: a database for comparative analysis of mitochondrial DNA, with a special focus on animal longevity.
Nucleic Acids Res. 2016; 44(D1):D1262-5.