Stats for family Tropidophiidae
Species in family:
| Stats for total mtDNA (group size: 1 species) | |||||||
|---|---|---|---|---|---|---|---|
| Species | GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) |
| Tropidophis haetianus | 38.7 | 61.3 | 4404 | 2220 | 4559 | 5950 | 15.3 |
| Stats for total protein-coding genes (group size: 1 species) | |||||||
|---|---|---|---|---|---|---|---|
| Species | GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) |
| Tropidophis haetianus | 38.6 | 61.4 | 3022 | 1330 | 2979 | 3939 | 15.3 |
| Stats for D-loop (group size: 0 species) | |||||||
|---|---|---|---|---|---|---|---|
| There is no data for D-loop in this group. |
| Stats for total tRNA-coding genes (group size: 1 species) | |||||||
|---|---|---|---|---|---|---|---|
| Species | GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) |
| Tropidophis haetianus | 39.7 | 60.1 | 335 | 234 | 380 | 481 | 15.3 |
| Stats for total rRNA-coding genes (group size: 1 species) | |||||||
|---|---|---|---|---|---|---|---|
| Species | GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) |
| Tropidophis haetianus | 40.3 | 59.7 | 559 | 422 | 525 | 928 | 15.3 |
| Stats for ATP6 (group size: 1 species) | |||||||
|---|---|---|---|---|---|---|---|
| Species | GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) |
| Tropidophis haetianus | 39.9 | 60.1 | 193 | 79 | 183 | 226 | 15.3 |
| Stats for ATP8 (group size: 1 species) | |||||||
|---|---|---|---|---|---|---|---|
| Species | GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) |
| Tropidophis haetianus | 26.7 | 73.3 | 29 | 14 | 45 | 73 | 15.3 |
| Stats for COX1 (group size: 1 species) | |||||||
|---|---|---|---|---|---|---|---|
| Species | GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) |
| Tropidophis haetianus | 40.5 | 59.4 | 400 | 236 | 446 | 487 | 15.3 |
| Stats for COX2 (group size: 1 species) | |||||||
|---|---|---|---|---|---|---|---|
| Species | GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) |
| Tropidophis haetianus | 43.3 | 56.7 | 187 | 112 | 162 | 229 | 15.3 |
| Stats for COX3 (group size: 1 species) | |||||||
|---|---|---|---|---|---|---|---|
| Species | GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) |
| Tropidophis haetianus | 41.2 | 58.8 | 210 | 113 | 212 | 249 | 15.3 |
| Stats for CYTB (group size: 1 species) | |||||||
|---|---|---|---|---|---|---|---|
| Species | GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) |
| Tropidophis haetianus | 36.9 | 63.1 | 287 | 124 | 335 | 367 | 15.3 |
| Stats for ND1 (group size: 1 species) | |||||||
|---|---|---|---|---|---|---|---|
| Species | GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) |
| Tropidophis haetianus | 40.0 | 60.0 | 266 | 120 | 255 | 323 | 15.3 |
| Stats for ND2 (group size: 1 species) | |||||||
|---|---|---|---|---|---|---|---|
| Species | GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) |
| Tropidophis haetianus | 35.3 | 64.7 | 274 | 90 | 261 | 405 | 15.3 |
| Stats for ND3 (group size: 1 species) | |||||||
|---|---|---|---|---|---|---|---|
| Species | GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) |
| Tropidophis haetianus | 38.8 | 61.2 | 91 | 42 | 98 | 112 | 15.3 |
| Stats for ND4 (group size: 1 species) | |||||||
|---|---|---|---|---|---|---|---|
| Species | GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) |
| Tropidophis haetianus | 40.8 | 59.2 | 401 | 152 | 343 | 460 | 15.3 |
| Stats for ND4L (group size: 1 species) | |||||||
|---|---|---|---|---|---|---|---|
| Species | GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) |
| Tropidophis haetianus | 36.8 | 63.2 | 74 | 33 | 72 | 112 | 15.3 |
| Stats for ND5 (group size: 1 species) | |||||||
|---|---|---|---|---|---|---|---|
| Species | GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) |
| Tropidophis haetianus | 36.8 | 63.2 | 480 | 179 | 466 | 666 | 15.3 |
| Stats for ND6 (group size: 1 species) | |||||||
|---|---|---|---|---|---|---|---|
| Species | GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) |
| Tropidophis haetianus | 33.3 | 66.7 | 132 | 36 | 102 | 234 | 15.3 |
| Stats for 12S rRNA gene (group size: 1 species) | |||||||
|---|---|---|---|---|---|---|---|
| Species | GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) |
| Tropidophis haetianus | 42.5 | 57.5 | 221 | 171 | 194 | 336 | 15.3 |
| Stats for 16S rRNA gene (group size: 1 species) | |||||||
|---|---|---|---|---|---|---|---|
| Species | GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) |
| Tropidophis haetianus | 39.0 | 61.0 | 338 | 251 | 331 | 592 | 15.3 |
Contact: Vadim E. Fraifeld, MD, PhD
Head: Lab for the Biology of Aging, The Shraga Segal Department of Microbiology, Immunology and Genetics, Faculty of Health Sciences, Ben-Gurion University of the Negev
P.O. Box 653, Beer-Sheva 8410501, Israel
Email:
Head: Lab for the Biology of Aging, The Shraga Segal Department of Microbiology, Immunology and Genetics, Faculty of Health Sciences, Ben-Gurion University of the Negev
P.O. Box 653, Beer-Sheva 8410501, Israel
Email:
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If you would like to cite this database please use:
Toren D, Barzilay T, Tacutu R, Lehmann G, Muradian KK, Fraifeld VE. MitoAge: a database for comparative analysis of mitochondrial DNA, with a special focus on animal longevity. Nucleic Acids Res. 2016; 44(D1):D1262-5.
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