Stats for family Chelydridae
Stats for total mtDNA (group size: 2 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Macrochelys temminckii |
37.9 |
62.1 |
4183 |
2098 |
4541 |
5747 |
70.3 |
Chelydra serpentina |
37.7 |
62.3 |
4174 |
2097 |
4634 |
5726 |
47.0 |
Stats for total protein-coding genes (group size: 2 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Macrochelys temminckii |
38.3 |
61.7 |
3037 |
1307 |
3127 |
3861 |
70.3 |
Chelydra serpentina |
38.0 |
62.0 |
3020 |
1297 |
3196 |
3845 |
47.0 |
Stats for D-loop (group size: 2 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Macrochelys temminckii |
31.0 |
69.0 |
205 |
125 |
375 |
358 |
70.3 |
Chelydra serpentina |
30.6 |
69.4 |
209 |
135 |
417 |
364 |
47.0 |
Stats for total tRNA-coding genes (group size: 2 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Macrochelys temminckii |
38.0 |
62.0 |
348 |
239 |
418 |
539 |
70.3 |
Chelydra serpentina |
38.2 |
61.8 |
351 |
239 |
416 |
540 |
47.0 |
Stats for total rRNA-coding genes (group size: 2 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Macrochelys temminckii |
38.6 |
61.4 |
570 |
421 |
606 |
973 |
70.3 |
Chelydra serpentina |
39.2 |
60.8 |
585 |
423 |
593 |
970 |
47.0 |
Stats for ATP6 (group size: 2 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Macrochelys temminckii |
36.8 |
63.2 |
189 |
67 |
195 |
245 |
70.3 |
Chelydra serpentina |
37.1 |
62.9 |
193 |
61 |
190 |
240 |
47.0 |
Stats for ATP8 (group size: 2 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Macrochelys temminckii |
34.5 |
65.5 |
47 |
10 |
43 |
65 |
70.3 |
Chelydra serpentina |
33.9 |
66.1 |
49 |
7 |
43 |
66 |
47.0 |
Stats for COX1 (group size: 2 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Macrochelys temminckii |
39.7 |
60.3 |
358 |
256 |
473 |
461 |
70.3 |
Chelydra serpentina |
39.0 |
61.0 |
352 |
252 |
479 |
465 |
47.0 |
Stats for COX2 (group size: 2 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Macrochelys temminckii |
36.1 |
63.9 |
158 |
90 |
194 |
245 |
70.3 |
Chelydra serpentina |
34.5 |
65.5 |
149 |
87 |
202 |
246 |
47.0 |
Stats for COX3 (group size: 2 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Macrochelys temminckii |
41.2 |
58.8 |
199 |
113 |
216 |
229 |
70.3 |
Chelydra serpentina |
42.0 |
58.0 |
213 |
117 |
220 |
235 |
47.0 |
Stats for CYTB (group size: 2 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Macrochelys temminckii |
41.7 |
58.3 |
346 |
131 |
301 |
366 |
70.3 |
Chelydra serpentina |
41.1 |
58.9 |
338 |
132 |
319 |
355 |
47.0 |
Stats for ND1 (group size: 2 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Macrochelys temminckii |
37.6 |
62.4 |
260 |
105 |
287 |
319 |
70.3 |
Chelydra serpentina |
37.9 |
62.1 |
257 |
111 |
297 |
305 |
47.0 |
Stats for ND2 (group size: 2 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Macrochelys temminckii |
37.6 |
62.4 |
297 |
94 |
269 |
379 |
70.3 |
Chelydra serpentina |
36.0 |
64.0 |
286 |
88 |
277 |
388 |
47.0 |
Stats for ND3 (group size: 2 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Macrochelys temminckii |
36.6 |
63.4 |
89 |
39 |
107 |
115 |
70.3 |
Chelydra serpentina |
38.6 |
61.4 |
94 |
41 |
106 |
109 |
47.0 |
Stats for ND4 (group size: 2 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Macrochelys temminckii |
37.2 |
62.8 |
368 |
146 |
382 |
485 |
70.3 |
Chelydra serpentina |
35.8 |
64.2 |
357 |
138 |
395 |
494 |
47.0 |
Stats for ND4L (group size: 2 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Macrochelys temminckii |
38.4 |
61.6 |
80 |
34 |
101 |
82 |
70.3 |
Chelydra serpentina |
39.1 |
60.9 |
87 |
29 |
96 |
85 |
47.0 |
Stats for ND5 (group size: 2 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Macrochelys temminckii |
37.6 |
62.4 |
492 |
185 |
495 |
628 |
70.3 |
Chelydra serpentina |
38.2 |
61.8 |
498 |
191 |
493 |
624 |
47.0 |
Stats for ND6 (group size: 2 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Macrochelys temminckii |
38.8 |
61.2 |
163 |
43 |
71 |
254 |
70.3 |
Chelydra serpentina |
37.5 |
62.5 |
152 |
45 |
84 |
244 |
47.0 |
Stats for 12S rRNA gene (group size: 2 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Macrochelys temminckii |
41.0 |
59.0 |
229 |
167 |
223 |
347 |
70.3 |
Chelydra serpentina |
42.3 |
57.7 |
244 |
164 |
210 |
347 |
47.0 |
Stats for 16S rRNA gene (group size: 2 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Macrochelys temminckii |
37.1 |
62.9 |
341 |
254 |
383 |
626 |
70.3 |
Chelydra serpentina |
37.4 |
62.6 |
341 |
259 |
383 |
623 |
47.0 |
Contact: Vadim E. Fraifeld, MD, PhD
Head: Lab for the Biology of Aging,
The Shraga Segal Department of Microbiology, Immunology and Genetics,
Faculty of Health Sciences, Ben-Gurion University of the Negev
P.O. Box 653, Beer-Sheva 8410501, Israel
Email:
- How to cite us:
-
If you would like to cite this database please use:
Toren D, Barzilay T, Tacutu R, Lehmann G, Muradian KK, Fraifeld VE.
MitoAge: a database for comparative analysis of mitochondrial DNA, with a special focus on animal longevity.
Nucleic Acids Res. 2016; 44(D1):D1262-5.