Stats for family Pelomedusidae
| Stats for total mtDNA (group size: 2 species) |
| Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
| Pelusios castaneus |
40.4 |
59.6 |
4730 |
2048 |
4557 |
5426 |
41.0 |
| Pelomedusa subrufa |
38.7 |
61.3 |
4466 |
2031 |
4597 |
5693 |
20.1 |
| Stats for total protein-coding genes (group size: 2 species) |
| Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
| Pelusios castaneus |
41.3 |
58.7 |
3433 |
1228 |
3076 |
3540 |
41.0 |
| Pelomedusa subrufa |
39.5 |
60.5 |
3260 |
1230 |
3144 |
3733 |
20.1 |
| Stats for D-loop (group size: 2 species) |
| Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
| Pelusios castaneus |
33.3 |
66.7 |
270 |
123 |
419 |
368 |
41.0 |
| Pelomedusa subrufa |
27.3 |
72.7 |
223 |
103 |
416 |
452 |
20.1 |
| Stats for total tRNA-coding genes (group size: 2 species) |
| Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
| Pelusios castaneus |
38.7 |
61.3 |
354 |
236 |
415 |
519 |
41.0 |
| Pelomedusa subrufa |
38.2 |
61.8 |
340 |
243 |
418 |
525 |
20.1 |
| Stats for total rRNA-coding genes (group size: 2 species) |
| Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
| Pelusios castaneus |
40.8 |
59.2 |
600 |
449 |
594 |
925 |
41.0 |
| Pelomedusa subrufa |
40.9 |
59.1 |
608 |
445 |
581 |
938 |
20.1 |
| Stats for ATP6 (group size: 2 species) |
| Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
| Pelusios castaneus |
40.6 |
59.4 |
225 |
55 |
189 |
221 |
41.0 |
| Pelomedusa subrufa |
37.1 |
62.9 |
204 |
51 |
207 |
225 |
20.1 |
| Stats for ATP8 (group size: 2 species) |
| Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
| Pelusios castaneus |
36.4 |
63.6 |
54 |
6 |
43 |
62 |
41.0 |
| Pelomedusa subrufa |
31.0 |
69.0 |
46 |
6 |
52 |
64 |
20.1 |
| Stats for COX1 (group size: 2 species) |
| Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
| Pelusios castaneus |
41.7 |
58.3 |
427 |
218 |
456 |
444 |
41.0 |
| Pelomedusa subrufa |
41.0 |
59.0 |
406 |
227 |
449 |
463 |
20.1 |
| Stats for COX2 (group size: 2 species) |
| Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
| Pelusios castaneus |
40.6 |
59.4 |
202 |
77 |
177 |
232 |
41.0 |
| Pelomedusa subrufa |
37.5 |
62.5 |
176 |
82 |
188 |
242 |
20.1 |
| Stats for COX3 (group size: 2 species) |
| Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
| Pelusios castaneus |
42.3 |
57.7 |
233 |
99 |
221 |
232 |
41.0 |
| Pelomedusa subrufa |
40.1 |
59.9 |
215 |
99 |
229 |
241 |
20.1 |
| Stats for CYTB (group size: 2 species) |
| Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
| Pelusios castaneus |
45.6 |
54.4 |
375 |
127 |
298 |
301 |
41.0 |
| Pelomedusa subrufa |
43.2 |
56.8 |
364 |
130 |
302 |
347 |
20.1 |
| Stats for ND1 (group size: 2 species) |
| Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
| Pelusios castaneus |
41.0 |
59.0 |
285 |
114 |
298 |
275 |
41.0 |
| Pelomedusa subrufa |
39.5 |
60.5 |
270 |
112 |
298 |
288 |
20.1 |
| Stats for ND2 (group size: 2 species) |
| Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
| Pelusios castaneus |
40.1 |
59.9 |
321 |
98 |
270 |
355 |
41.0 |
| Pelomedusa subrufa |
38.3 |
61.7 |
294 |
104 |
284 |
358 |
20.1 |
| Stats for ND3 (group size: 2 species) |
| Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
| Pelusios castaneus |
43.3 |
56.7 |
101 |
31 |
80 |
93 |
41.0 |
| Pelomedusa subrufa |
34.4 |
65.6 |
88 |
33 |
106 |
125 |
20.1 |
| Stats for ND4 (group size: 2 species) |
| Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
| Pelusios castaneus |
39.6 |
60.4 |
414 |
135 |
389 |
448 |
41.0 |
| Pelomedusa subrufa |
39.0 |
61.0 |
405 |
132 |
383 |
458 |
20.1 |
| Stats for ND4L (group size: 2 species) |
| Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
| Pelusios castaneus |
40.5 |
59.5 |
85 |
36 |
88 |
90 |
41.0 |
| Pelomedusa subrufa |
39.5 |
60.5 |
90 |
28 |
87 |
94 |
20.1 |
| Stats for ND5 (group size: 2 species) |
| Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
| Pelusios castaneus |
39.7 |
60.3 |
534 |
188 |
500 |
596 |
41.0 |
| Pelomedusa subrufa |
39.4 |
60.6 |
528 |
188 |
488 |
614 |
20.1 |
| Stats for ND6 (group size: 2 species) |
| Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
| Pelusios castaneus |
44.6 |
55.4 |
179 |
46 |
75 |
204 |
41.0 |
| Pelomedusa subrufa |
41.4 |
58.6 |
176 |
40 |
79 |
227 |
20.1 |
| Stats for 12S rRNA gene (group size: 2 species) |
| Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
| Pelusios castaneus |
43.5 |
56.5 |
240 |
182 |
211 |
338 |
41.0 |
| Pelomedusa subrufa |
42.5 |
57.5 |
238 |
173 |
217 |
340 |
20.1 |
| Stats for 16S rRNA gene (group size: 2 species) |
| Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
| Pelusios castaneus |
39.3 |
60.7 |
360 |
267 |
383 |
587 |
41.0 |
| Pelomedusa subrufa |
40.0 |
60.0 |
370 |
272 |
364 |
598 |
20.1 |
Contact: Vadim E. Fraifeld, MD, PhD
Head: Lab for the Biology of Aging,
The Shraga Segal Department of Microbiology, Immunology and Genetics,
Faculty of Health Sciences, Ben-Gurion University of the Negev
P.O. Box 653, Beer-Sheva 8410501, Israel
Email: 
- How to cite us:
-
If you would like to cite this database please use:
Toren D, Barzilay T, Tacutu R, Lehmann G, Muradian KK, Fraifeld VE.
MitoAge: a database for comparative analysis of mitochondrial DNA, with a special focus on animal longevity.
Nucleic Acids Res. 2016; 44(D1):D1262-5.
