Stats for family Pomatomidae
Stats for total mtDNA (group size: 1 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Pomatomus saltatrix |
45.2 |
54.8 |
4726 |
2746 |
4417 |
4655 |
9.0 |
Stats for total protein-coding genes (group size: 1 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Pomatomus saltatrix |
45.5 |
54.5 |
3448 |
1742 |
3193 |
3033 |
9.0 |
Stats for D-loop (group size: 1 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Pomatomus saltatrix |
34.9 |
65.1 |
186 |
112 |
265 |
292 |
9.0 |
Stats for total tRNA-coding genes (group size: 1 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Pomatomus saltatrix |
45.7 |
54.3 |
396 |
314 |
378 |
467 |
9.0 |
Stats for total rRNA-coding genes (group size: 1 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Pomatomus saltatrix |
47.0 |
53.0 |
680 |
572 |
567 |
845 |
9.0 |
Stats for ATP6 (group size: 1 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Pomatomus saltatrix |
45.1 |
54.9 |
208 |
100 |
198 |
177 |
9.0 |
Stats for ATP8 (group size: 1 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Pomatomus saltatrix |
48.2 |
51.8 |
55 |
26 |
38 |
49 |
9.0 |
Stats for COX1 (group size: 1 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Pomatomus saltatrix |
45.6 |
54.4 |
422 |
290 |
465 |
383 |
9.0 |
Stats for COX2 (group size: 1 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Pomatomus saltatrix |
43.7 |
56.3 |
193 |
109 |
190 |
199 |
9.0 |
Stats for COX3 (group size: 1 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Pomatomus saltatrix |
45.7 |
54.3 |
230 |
129 |
223 |
203 |
9.0 |
Stats for CYTB (group size: 1 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Pomatomus saltatrix |
45.2 |
54.8 |
341 |
175 |
350 |
275 |
9.0 |
Stats for ND1 (group size: 1 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Pomatomus saltatrix |
47.6 |
52.4 |
313 |
151 |
272 |
239 |
9.0 |
Stats for ND2 (group size: 1 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Pomatomus saltatrix |
47.6 |
52.4 |
360 |
138 |
266 |
282 |
9.0 |
Stats for ND3 (group size: 1 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Pomatomus saltatrix |
44.4 |
55.6 |
102 |
53 |
113 |
81 |
9.0 |
Stats for ND4 (group size: 1 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Pomatomus saltatrix |
44.6 |
55.4 |
406 |
210 |
384 |
381 |
9.0 |
Stats for ND4L (group size: 1 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Pomatomus saltatrix |
47.5 |
52.5 |
99 |
42 |
89 |
67 |
9.0 |
Stats for ND5 (group size: 1 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Pomatomus saltatrix |
44.4 |
55.6 |
563 |
253 |
509 |
514 |
9.0 |
Stats for ND6 (group size: 1 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Pomatomus saltatrix |
44.1 |
55.9 |
160 |
70 |
101 |
191 |
9.0 |
Stats for 12S rRNA gene (group size: 1 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Pomatomus saltatrix |
48.9 |
51.1 |
250 |
219 |
208 |
283 |
9.0 |
Stats for 16S rRNA gene (group size: 1 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Pomatomus saltatrix |
46.0 |
54.0 |
430 |
353 |
359 |
562 |
9.0 |
Contact: Vadim E. Fraifeld, MD, PhD
Head: Lab for the Biology of Aging,
The Shraga Segal Department of Microbiology, Immunology and Genetics,
Faculty of Health Sciences, Ben-Gurion University of the Negev
P.O. Box 653, Beer-Sheva 8410501, Israel
Email:
- How to cite us:
-
If you would like to cite this database please use:
Toren D, Barzilay T, Tacutu R, Lehmann G, Muradian KK, Fraifeld VE.
MitoAge: a database for comparative analysis of mitochondrial DNA, with a special focus on animal longevity.
Nucleic Acids Res. 2016; 44(D1):D1262-5.