Stats for family Podicipedidae
| Stats for total mtDNA (group size: 1 species) |
| Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
| Tachybaptus ruficollis |
45.8 |
54.2 |
5437 |
2209 |
3755 |
5287 |
17.5 |
| Stats for total protein-coding genes (group size: 1 species) |
| Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
| Tachybaptus ruficollis |
46.4 |
53.6 |
3972 |
1302 |
2500 |
3587 |
17.5 |
| Stats for D-loop (group size: 1 species) |
| Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
| Tachybaptus ruficollis |
40.9 |
59.1 |
305 |
165 |
367 |
313 |
17.5 |
| Stats for total tRNA-coding genes (group size: 1 species) |
| Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
| Tachybaptus ruficollis |
43.2 |
56.8 |
392 |
266 |
376 |
489 |
17.5 |
| Stats for total rRNA-coding genes (group size: 1 species) |
| Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
| Tachybaptus ruficollis |
47.0 |
53.0 |
734 |
477 |
494 |
869 |
17.5 |
| Stats for ATP6 (group size: 1 species) |
| Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
| Tachybaptus ruficollis |
46.2 |
53.8 |
259 |
57 |
157 |
211 |
17.5 |
| Stats for ATP8 (group size: 1 species) |
| Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
| Tachybaptus ruficollis |
44.6 |
55.4 |
67 |
8 |
35 |
58 |
17.5 |
| Stats for COX1 (group size: 1 species) |
| Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
| Tachybaptus ruficollis |
48.2 |
51.8 |
503 |
244 |
360 |
444 |
17.5 |
| Stats for COX2 (group size: 1 species) |
| Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
| Tachybaptus ruficollis |
45.9 |
54.1 |
221 |
93 |
149 |
221 |
17.5 |
| Stats for COX3 (group size: 1 species) |
| Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
| Tachybaptus ruficollis |
46.9 |
53.1 |
256 |
112 |
187 |
229 |
17.5 |
| Stats for CYTB (group size: 1 species) |
| Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
| Tachybaptus ruficollis |
48.6 |
51.4 |
422 |
134 |
259 |
328 |
17.5 |
| Stats for ND1 (group size: 1 species) |
| Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
| Tachybaptus ruficollis |
46.3 |
53.7 |
330 |
119 |
245 |
275 |
17.5 |
| Stats for ND2 (group size: 1 species) |
| Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
| Tachybaptus ruficollis |
41.5 |
58.5 |
345 |
86 |
247 |
361 |
17.5 |
| Stats for ND3 (group size: 1 species) |
| Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
| Tachybaptus ruficollis |
46.9 |
53.1 |
125 |
40 |
80 |
107 |
17.5 |
| Stats for ND4 (group size: 1 species) |
| Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
| Tachybaptus ruficollis |
45.8 |
54.2 |
498 |
130 |
285 |
458 |
17.5 |
| Stats for ND4L (group size: 1 species) |
| Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
| Tachybaptus ruficollis |
46.8 |
53.2 |
103 |
36 |
69 |
89 |
17.5 |
| Stats for ND5 (group size: 1 species) |
| Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
| Tachybaptus ruficollis |
46.2 |
53.8 |
645 |
194 |
378 |
598 |
17.5 |
| Stats for ND6 (group size: 1 species) |
| Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
| Tachybaptus ruficollis |
48.3 |
51.7 |
201 |
51 |
53 |
217 |
17.5 |
| Stats for 12S rRNA gene (group size: 1 species) |
| Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
| Tachybaptus ruficollis |
49.1 |
50.9 |
287 |
190 |
184 |
311 |
17.5 |
| Stats for 16S rRNA gene (group size: 1 species) |
| Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
| Tachybaptus ruficollis |
45.8 |
54.2 |
447 |
287 |
310 |
558 |
17.5 |
Contact: Vadim E. Fraifeld, MD, PhD
Head: Lab for the Biology of Aging,
The Shraga Segal Department of Microbiology, Immunology and Genetics,
Faculty of Health Sciences, Ben-Gurion University of the Negev
P.O. Box 653, Beer-Sheva 8410501, Israel
Email: 
- How to cite us:
-
If you would like to cite this database please use:
Toren D, Barzilay T, Tacutu R, Lehmann G, Muradian KK, Fraifeld VE.
MitoAge: a database for comparative analysis of mitochondrial DNA, with a special focus on animal longevity.
Nucleic Acids Res. 2016; 44(D1):D1262-5.
