Stats for family Phaethontidae
Species in family:
| Stats for total mtDNA (group size: 1 species) | |||||||
|---|---|---|---|---|---|---|---|
| Species | GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) |
| Phaethon rubricauda | 47.2 | 52.8 | 5858 | 2541 | 4149 | 5229 | 32.7 |
| Stats for total protein-coding genes (group size: 1 species) | |||||||
|---|---|---|---|---|---|---|---|
| Species | GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) |
| Phaethon rubricauda | 49.3 | 50.7 | 4075 | 1527 | 2546 | 3217 | 32.7 |
| Stats for D-loop (group size: 0 species) | |||||||
|---|---|---|---|---|---|---|---|
| There is no data for D-loop in this group. |
| Stats for total tRNA-coding genes (group size: 1 species) | |||||||
|---|---|---|---|---|---|---|---|
| Species | GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) |
| Phaethon rubricauda | 44.8 | 55.2 | 406 | 285 | 375 | 476 | 32.7 |
| Stats for total rRNA-coding genes (group size: 1 species) | |||||||
|---|---|---|---|---|---|---|---|
| Species | GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) |
| Phaethon rubricauda | 48.1 | 51.9 | 774 | 467 | 487 | 853 | 32.7 |
| Stats for ATP6 (group size: 1 species) | |||||||
|---|---|---|---|---|---|---|---|
| Species | GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) |
| Phaethon rubricauda | 49.7 | 50.3 | 269 | 77 | 164 | 186 | 32.7 |
| Stats for ATP8 (group size: 1 species) | |||||||
|---|---|---|---|---|---|---|---|
| Species | GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) |
| Phaethon rubricauda | 43.5 | 56.5 | 61 | 12 | 39 | 56 | 32.7 |
| Stats for COX1 (group size: 1 species) | |||||||
|---|---|---|---|---|---|---|---|
| Species | GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) |
| Phaethon rubricauda | 48.9 | 51.1 | 501 | 257 | 375 | 418 | 32.7 |
| Stats for COX2 (group size: 1 species) | |||||||
|---|---|---|---|---|---|---|---|
| Species | GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) |
| Phaethon rubricauda | 49.1 | 50.9 | 221 | 115 | 155 | 193 | 32.7 |
| Stats for COX3 (group size: 1 species) | |||||||
|---|---|---|---|---|---|---|---|
| Species | GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) |
| Phaethon rubricauda | 49.9 | 50.1 | 264 | 127 | 187 | 206 | 32.7 |
| Stats for CYTB (group size: 1 species) | |||||||
|---|---|---|---|---|---|---|---|
| Species | GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) |
| Phaethon rubricauda | 51.7 | 48.3 | 430 | 161 | 264 | 288 | 32.7 |
| Stats for ND1 (group size: 1 species) | |||||||
|---|---|---|---|---|---|---|---|
| Species | GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) |
| Phaethon rubricauda | 49.8 | 50.2 | 356 | 131 | 232 | 259 | 32.7 |
| Stats for ND2 (group size: 1 species) | |||||||
|---|---|---|---|---|---|---|---|
| Species | GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) |
| Phaethon rubricauda | 47.6 | 52.4 | 388 | 108 | 218 | 327 | 32.7 |
| Stats for ND3 (group size: 1 species) | |||||||
|---|---|---|---|---|---|---|---|
| Species | GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) |
| Phaethon rubricauda | 49.0 | 51.0 | 123 | 49 | 91 | 88 | 32.7 |
| Stats for ND4 (group size: 1 species) | |||||||
|---|---|---|---|---|---|---|---|
| Species | GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) |
| Phaethon rubricauda | 48.8 | 51.2 | 518 | 149 | 301 | 400 | 32.7 |
| Stats for ND4L (group size: 1 species) | |||||||
|---|---|---|---|---|---|---|---|
| Species | GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) |
| Phaethon rubricauda | 48.5 | 51.5 | 99 | 45 | 77 | 76 | 32.7 |
| Stats for ND5 (group size: 1 species) | |||||||
|---|---|---|---|---|---|---|---|
| Species | GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) |
| Phaethon rubricauda | 48.2 | 51.8 | 644 | 230 | 398 | 540 | 32.7 |
| Stats for ND6 (group size: 1 species) | |||||||
|---|---|---|---|---|---|---|---|
| Species | GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) |
| Phaethon rubricauda | 53.1 | 46.9 | 207 | 70 | 52 | 193 | 32.7 |
| Stats for 12S rRNA gene (group size: 1 species) | |||||||
|---|---|---|---|---|---|---|---|
| Species | GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) |
| Phaethon rubricauda | 49.4 | 50.6 | 300 | 185 | 185 | 311 | 32.7 |
| Stats for 16S rRNA gene (group size: 1 species) | |||||||
|---|---|---|---|---|---|---|---|
| Species | GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) |
| Phaethon rubricauda | 47.3 | 52.8 | 474 | 282 | 302 | 542 | 32.7 |
Contact: Vadim E. Fraifeld, MD, PhD
Head: Lab for the Biology of Aging, The Shraga Segal Department of Microbiology, Immunology and Genetics, Faculty of Health Sciences, Ben-Gurion University of the Negev
P.O. Box 653, Beer-Sheva 8410501, Israel
Email:
Head: Lab for the Biology of Aging, The Shraga Segal Department of Microbiology, Immunology and Genetics, Faculty of Health Sciences, Ben-Gurion University of the Negev
P.O. Box 653, Beer-Sheva 8410501, Israel
Email:
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If you would like to cite this database please use:
Toren D, Barzilay T, Tacutu R, Lehmann G, Muradian KK, Fraifeld VE. MitoAge: a database for comparative analysis of mitochondrial DNA, with a special focus on animal longevity. Nucleic Acids Res. 2016; 44(D1):D1262-5.
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