Stats for family Malacanthidae
Stats for total mtDNA (group size: 1 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Branchiostegus japonicus |
46.3 |
53.7 |
4958 |
2704 |
4213 |
4666 |
12.0 |
Stats for total protein-coding genes (group size: 1 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Branchiostegus japonicus |
46.7 |
53.3 |
3648 |
1671 |
3034 |
3048 |
12.0 |
Stats for D-loop (group size: 1 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Branchiostegus japonicus |
39.1 |
60.9 |
188 |
147 |
246 |
275 |
12.0 |
Stats for total tRNA-coding genes (group size: 1 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Branchiostegus japonicus |
45.4 |
54.6 |
394 |
315 |
375 |
478 |
12.0 |
Stats for total rRNA-coding genes (group size: 1 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Branchiostegus japonicus |
47.6 |
52.4 |
705 |
558 |
542 |
846 |
12.0 |
Stats for ATP6 (group size: 1 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Branchiostegus japonicus |
46.8 |
53.2 |
218 |
102 |
189 |
175 |
12.0 |
Stats for ATP8 (group size: 1 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Branchiostegus japonicus |
38.1 |
61.9 |
46 |
18 |
46 |
58 |
12.0 |
Stats for COX1 (group size: 1 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Branchiostegus japonicus |
45.2 |
54.8 |
422 |
275 |
461 |
385 |
12.0 |
Stats for COX2 (group size: 1 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Branchiostegus japonicus |
45.6 |
54.4 |
206 |
109 |
184 |
192 |
12.0 |
Stats for COX3 (group size: 1 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Branchiostegus japonicus |
47.0 |
53.0 |
240 |
129 |
220 |
196 |
12.0 |
Stats for CYTB (group size: 1 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Branchiostegus japonicus |
44.6 |
55.4 |
349 |
160 |
329 |
303 |
12.0 |
Stats for ND1 (group size: 1 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Branchiostegus japonicus |
47.2 |
52.8 |
313 |
147 |
256 |
259 |
12.0 |
Stats for ND2 (group size: 1 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Branchiostegus japonicus |
49.9 |
50.1 |
390 |
132 |
254 |
270 |
12.0 |
Stats for ND3 (group size: 1 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Branchiostegus japonicus |
50.1 |
49.9 |
130 |
45 |
101 |
73 |
12.0 |
Stats for ND4 (group size: 1 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Branchiostegus japonicus |
47.8 |
52.2 |
465 |
196 |
350 |
372 |
12.0 |
Stats for ND4L (group size: 1 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Branchiostegus japonicus |
52.2 |
47.8 |
107 |
48 |
81 |
61 |
12.0 |
Stats for ND5 (group size: 1 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Branchiostegus japonicus |
45.5 |
54.5 |
590 |
247 |
491 |
511 |
12.0 |
Stats for ND6 (group size: 1 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Branchiostegus japonicus |
46.4 |
53.6 |
175 |
67 |
79 |
201 |
12.0 |
Stats for 12S rRNA gene (group size: 1 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Branchiostegus japonicus |
48.8 |
51.2 |
248 |
215 |
199 |
287 |
12.0 |
Stats for 16S rRNA gene (group size: 1 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Branchiostegus japonicus |
47.0 |
53.0 |
457 |
343 |
343 |
559 |
12.0 |
Contact: Vadim E. Fraifeld, MD, PhD
Head: Lab for the Biology of Aging,
The Shraga Segal Department of Microbiology, Immunology and Genetics,
Faculty of Health Sciences, Ben-Gurion University of the Negev
P.O. Box 653, Beer-Sheva 8410501, Israel
Email:
- How to cite us:
-
If you would like to cite this database please use:
Toren D, Barzilay T, Tacutu R, Lehmann G, Muradian KK, Fraifeld VE.
MitoAge: a database for comparative analysis of mitochondrial DNA, with a special focus on animal longevity.
Nucleic Acids Res. 2016; 44(D1):D1262-5.