Stats for family Phalacrocoracidae
Stats for total mtDNA (group size: 1 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Phalacrocorax carbo |
45.2 |
54.8 |
6064 |
2524 |
4364 |
6043 |
27.2 |
Stats for total protein-coding genes (group size: 1 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Phalacrocorax carbo |
46.1 |
53.9 |
4111 |
1378 |
2639 |
3775 |
27.2 |
Stats for D-loop (group size: 1 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Phalacrocorax carbo |
35.4 |
64.6 |
232 |
156 |
343 |
364 |
27.2 |
Stats for total tRNA-coding genes (group size: 1 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Phalacrocorax carbo |
43.0 |
57.0 |
458 |
299 |
429 |
574 |
27.2 |
Stats for total rRNA-coding genes (group size: 1 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Phalacrocorax carbo |
48.8 |
51.2 |
732 |
489 |
464 |
815 |
27.2 |
Stats for ATP6 (group size: 1 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Phalacrocorax carbo |
46.6 |
53.4 |
251 |
68 |
152 |
213 |
27.2 |
Stats for ATP8 (group size: 1 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Phalacrocorax carbo |
40.5 |
59.5 |
61 |
7 |
36 |
64 |
27.2 |
Stats for COX1 (group size: 1 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Phalacrocorax carbo |
47.5 |
52.5 |
487 |
249 |
381 |
434 |
27.2 |
Stats for COX2 (group size: 1 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Phalacrocorax carbo |
45.5 |
54.5 |
218 |
93 |
153 |
220 |
27.2 |
Stats for COX3 (group size: 1 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Phalacrocorax carbo |
48.1 |
51.9 |
261 |
116 |
187 |
220 |
27.2 |
Stats for CYTB (group size: 1 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Phalacrocorax carbo |
45.9 |
54.1 |
393 |
132 |
276 |
342 |
27.2 |
Stats for ND1 (group size: 1 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Phalacrocorax carbo |
45.6 |
54.4 |
324 |
122 |
257 |
275 |
27.2 |
Stats for ND2 (group size: 1 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Phalacrocorax carbo |
43.3 |
56.7 |
355 |
95 |
236 |
354 |
27.2 |
Stats for ND3 (group size: 1 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Phalacrocorax carbo |
43.2 |
56.8 |
115 |
37 |
91 |
109 |
27.2 |
Stats for ND4 (group size: 1 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Phalacrocorax carbo |
45.9 |
54.1 |
495 |
137 |
310 |
436 |
27.2 |
Stats for ND4L (group size: 1 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Phalacrocorax carbo |
46.8 |
53.2 |
103 |
36 |
68 |
90 |
27.2 |
Stats for ND5 (group size: 1 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Phalacrocorax carbo |
45.8 |
54.2 |
641 |
192 |
394 |
591 |
27.2 |
Stats for ND6 (group size: 1 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Phalacrocorax carbo |
48.5 |
51.5 |
205 |
48 |
51 |
218 |
27.2 |
Stats for 12S rRNA gene (group size: 1 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Phalacrocorax carbo |
52.0 |
48.0 |
311 |
200 |
173 |
299 |
27.2 |
Stats for 16S rRNA gene (group size: 1 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Phalacrocorax carbo |
46.8 |
53.2 |
421 |
289 |
291 |
516 |
27.2 |
Contact: Vadim E. Fraifeld, MD, PhD
Head: Lab for the Biology of Aging,
The Shraga Segal Department of Microbiology, Immunology and Genetics,
Faculty of Health Sciences, Ben-Gurion University of the Negev
P.O. Box 653, Beer-Sheva 8410501, Israel
Email:
- How to cite us:
-
If you would like to cite this database please use:
Toren D, Barzilay T, Tacutu R, Lehmann G, Muradian KK, Fraifeld VE.
MitoAge: a database for comparative analysis of mitochondrial DNA, with a special focus on animal longevity.
Nucleic Acids Res. 2016; 44(D1):D1262-5.