Stats for family Columbidae
Stats for total mtDNA (group size: 3 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Leptotila verreauxi |
45.9 |
54.1 |
5499 |
2384 |
4127 |
5166 |
8.6 |
Streptopelia chinensis |
46.0 |
54.0 |
5439 |
2364 |
4058 |
5105 |
9.8 |
Columba livia |
45.9 |
54.1 |
5496 |
2408 |
4131 |
5194 |
35.0 |
Stats for total protein-coding genes (group size: 3 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Leptotila verreauxi |
46.7 |
53.3 |
3909 |
1399 |
2743 |
3316 |
8.6 |
Streptopelia chinensis |
46.7 |
53.3 |
3904 |
1401 |
2722 |
3341 |
9.8 |
Columba livia |
46.7 |
53.3 |
3903 |
1408 |
2723 |
3332 |
35.0 |
Stats for D-loop (group size: 2 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Streptopelia chinensis |
42.7 |
57.3 |
403 |
207 |
413 |
404 |
9.8 |
Columba livia |
41.8 |
58.2 |
472 |
220 |
454 |
511 |
35.0 |
Stats for total tRNA-coding genes (group size: 3 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Leptotila verreauxi |
43.2 |
56.8 |
394 |
272 |
382 |
493 |
8.6 |
Streptopelia chinensis |
42.9 |
57.1 |
396 |
262 |
383 |
492 |
9.8 |
Columba livia |
44.0 |
56.0 |
402 |
278 |
379 |
485 |
35.0 |
Stats for total rRNA-coding genes (group size: 3 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Leptotila verreauxi |
46.6 |
53.4 |
697 |
494 |
537 |
828 |
8.6 |
Streptopelia chinensis |
46.5 |
53.5 |
702 |
489 |
526 |
846 |
9.8 |
Columba livia |
45.7 |
54.3 |
672 |
497 |
552 |
838 |
35.0 |
Stats for ATP6 (group size: 3 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Leptotila verreauxi |
45.2 |
54.8 |
234 |
75 |
186 |
188 |
8.6 |
Streptopelia chinensis |
45.6 |
54.4 |
242 |
70 |
175 |
197 |
9.8 |
Columba livia |
44.9 |
55.1 |
240 |
67 |
181 |
196 |
35.0 |
Stats for ATP8 (group size: 3 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Leptotila verreauxi |
39.5 |
60.5 |
57 |
9 |
43 |
58 |
8.6 |
Streptopelia chinensis |
44.0 |
56.0 |
63 |
11 |
40 |
54 |
9.8 |
Columba livia |
44.0 |
56.0 |
65 |
9 |
40 |
54 |
35.0 |
Stats for COX1 (group size: 3 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Leptotila verreauxi |
48.4 |
51.6 |
498 |
252 |
399 |
402 |
8.6 |
Streptopelia chinensis |
48.2 |
51.8 |
500 |
247 |
398 |
406 |
9.8 |
Columba livia |
48.2 |
51.8 |
496 |
251 |
399 |
405 |
35.0 |
Stats for COX2 (group size: 3 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Leptotila verreauxi |
45.3 |
54.7 |
210 |
100 |
170 |
204 |
8.6 |
Streptopelia chinensis |
47.2 |
52.8 |
221 |
102 |
158 |
203 |
9.8 |
Columba livia |
45.5 |
54.5 |
211 |
100 |
165 |
208 |
35.0 |
Stats for COX3 (group size: 3 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Leptotila verreauxi |
48.2 |
51.8 |
253 |
125 |
196 |
210 |
8.6 |
Streptopelia chinensis |
47.1 |
52.9 |
249 |
120 |
194 |
221 |
9.8 |
Columba livia |
48.3 |
51.7 |
261 |
118 |
195 |
210 |
35.0 |
Stats for CYTB (group size: 3 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Leptotila verreauxi |
48.6 |
51.4 |
417 |
139 |
275 |
312 |
8.6 |
Streptopelia chinensis |
48.3 |
51.7 |
408 |
144 |
282 |
309 |
9.8 |
Columba livia |
48.5 |
51.5 |
410 |
144 |
281 |
308 |
35.0 |
Stats for ND1 (group size: 3 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Leptotila verreauxi |
47.4 |
52.6 |
330 |
128 |
253 |
255 |
8.6 |
Streptopelia chinensis |
46.6 |
53.4 |
327 |
123 |
255 |
261 |
9.8 |
Columba livia |
47.2 |
52.8 |
331 |
125 |
259 |
251 |
35.0 |
Stats for ND2 (group size: 3 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Leptotila verreauxi |
44.0 |
56.0 |
356 |
101 |
253 |
329 |
8.6 |
Streptopelia chinensis |
43.5 |
56.5 |
352 |
100 |
250 |
337 |
9.8 |
Columba livia |
44.4 |
55.6 |
356 |
106 |
249 |
329 |
35.0 |
Stats for ND3 (group size: 3 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Leptotila verreauxi |
48.1 |
51.9 |
128 |
41 |
90 |
92 |
8.6 |
Streptopelia chinensis |
46.6 |
53.4 |
120 |
44 |
98 |
90 |
9.8 |
Columba livia |
46.3 |
53.7 |
120 |
43 |
94 |
95 |
35.0 |
Stats for ND4 (group size: 3 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Leptotila verreauxi |
45.4 |
54.6 |
483 |
143 |
342 |
410 |
8.6 |
Streptopelia chinensis |
46.3 |
53.7 |
489 |
149 |
330 |
410 |
9.8 |
Columba livia |
46.5 |
53.5 |
493 |
148 |
318 |
419 |
35.0 |
Stats for ND4L (group size: 3 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Leptotila verreauxi |
46.5 |
53.5 |
97 |
41 |
71 |
88 |
8.6 |
Streptopelia chinensis |
46.1 |
53.9 |
99 |
38 |
77 |
83 |
9.8 |
Columba livia |
47.8 |
52.2 |
99 |
43 |
73 |
82 |
35.0 |
Stats for ND5 (group size: 3 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Leptotila verreauxi |
46.4 |
53.6 |
640 |
203 |
413 |
562 |
8.6 |
Streptopelia chinensis |
46.3 |
53.7 |
634 |
208 |
413 |
563 |
9.8 |
Columba livia |
45.9 |
54.1 |
626 |
207 |
417 |
565 |
35.0 |
Stats for ND6 (group size: 3 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Leptotila verreauxi |
48.3 |
51.7 |
208 |
44 |
57 |
213 |
8.6 |
Streptopelia chinensis |
47.9 |
52.1 |
203 |
47 |
56 |
216 |
9.8 |
Columba livia |
47.1 |
52.9 |
197 |
49 |
57 |
219 |
35.0 |
Stats for 12S rRNA gene (group size: 3 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Leptotila verreauxi |
48.4 |
51.6 |
268 |
201 |
204 |
296 |
8.6 |
Streptopelia chinensis |
48.7 |
51.3 |
280 |
192 |
191 |
306 |
9.8 |
Columba livia |
47.7 |
52.3 |
268 |
196 |
205 |
304 |
35.0 |
Stats for 16S rRNA gene (group size: 3 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Leptotila verreauxi |
45.5 |
54.5 |
429 |
293 |
333 |
532 |
8.6 |
Streptopelia chinensis |
45.1 |
54.9 |
422 |
297 |
335 |
540 |
9.8 |
Columba livia |
44.5 |
55.5 |
404 |
301 |
347 |
534 |
35.0 |
Contact: Vadim E. Fraifeld, MD, PhD
Head: Lab for the Biology of Aging,
The Shraga Segal Department of Microbiology, Immunology and Genetics,
Faculty of Health Sciences, Ben-Gurion University of the Negev
P.O. Box 653, Beer-Sheva 8410501, Israel
Email:
- How to cite us:
-
If you would like to cite this database please use:
Toren D, Barzilay T, Tacutu R, Lehmann G, Muradian KK, Fraifeld VE.
MitoAge: a database for comparative analysis of mitochondrial DNA, with a special focus on animal longevity.
Nucleic Acids Res. 2016; 44(D1):D1262-5.