Stats for family Paridae
Stats for total mtDNA (group size: 3 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Periparus ater |
48.4 |
51.6 |
5684 |
2437 |
3762 |
4900 |
9.5 |
Poecile palustris |
48.3 |
51.7 |
5654 |
2478 |
3786 |
4905 |
11.9 |
Parus major |
47.7 |
52.3 |
5631 |
2370 |
3796 |
4979 |
15.4 |
Stats for total protein-coding genes (group size: 3 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Periparus ater |
49.9 |
50.1 |
4197 |
1480 |
2494 |
3207 |
9.5 |
Poecile palustris |
49.8 |
50.2 |
4160 |
1510 |
2518 |
3187 |
11.9 |
Parus major |
49.0 |
51.0 |
4161 |
1416 |
2504 |
3296 |
15.4 |
Stats for D-loop (group size: 1 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Periparus ater |
43.8 |
56.2 |
355 |
169 |
361 |
310 |
9.5 |
Stats for total tRNA-coding genes (group size: 3 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Periparus ater |
42.9 |
57.1 |
398 |
265 |
374 |
510 |
9.5 |
Poecile palustris |
42.9 |
57.1 |
399 |
265 |
374 |
509 |
11.9 |
Parus major |
42.2 |
57.8 |
390 |
262 |
379 |
513 |
15.4 |
Stats for total rRNA-coding genes (group size: 3 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Periparus ater |
47.0 |
53.0 |
690 |
523 |
521 |
845 |
9.5 |
Poecile palustris |
46.9 |
53.1 |
689 |
526 |
529 |
844 |
11.9 |
Parus major |
46.8 |
53.2 |
683 |
526 |
528 |
844 |
15.4 |
Stats for ATP6 (group size: 3 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Periparus ater |
51.3 |
48.7 |
271 |
80 |
144 |
189 |
9.5 |
Poecile palustris |
48.1 |
51.9 |
259 |
70 |
161 |
194 |
11.9 |
Parus major |
49.4 |
50.6 |
272 |
66 |
153 |
193 |
15.4 |
Stats for ATP8 (group size: 3 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Periparus ater |
45.2 |
54.8 |
67 |
9 |
41 |
51 |
9.5 |
Poecile palustris |
44.0 |
56.0 |
63 |
11 |
46 |
48 |
11.9 |
Parus major |
45.8 |
54.2 |
66 |
11 |
36 |
55 |
15.4 |
Stats for COX1 (group size: 3 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Periparus ater |
50.5 |
49.5 |
524 |
260 |
349 |
418 |
9.5 |
Poecile palustris |
50.5 |
49.5 |
517 |
271 |
365 |
407 |
11.9 |
Parus major |
50.2 |
49.8 |
518 |
261 |
356 |
416 |
15.4 |
Stats for COX2 (group size: 3 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Periparus ater |
49.7 |
50.3 |
238 |
102 |
148 |
196 |
9.5 |
Poecile palustris |
49.9 |
50.1 |
236 |
104 |
143 |
198 |
11.9 |
Parus major |
50.6 |
49.4 |
244 |
102 |
138 |
200 |
15.4 |
Stats for COX3 (group size: 3 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Periparus ater |
50.8 |
49.2 |
274 |
124 |
188 |
198 |
9.5 |
Poecile palustris |
50.6 |
49.4 |
274 |
123 |
184 |
203 |
11.9 |
Parus major |
51.0 |
49.0 |
280 |
120 |
182 |
202 |
15.4 |
Stats for CYTB (group size: 3 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Periparus ater |
48.6 |
51.4 |
410 |
145 |
274 |
314 |
9.5 |
Poecile palustris |
49.9 |
50.1 |
428 |
142 |
264 |
309 |
11.9 |
Parus major |
49.7 |
50.3 |
427 |
141 |
263 |
311 |
15.4 |
Stats for ND1 (group size: 3 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Periparus ater |
50.1 |
49.9 |
355 |
135 |
228 |
260 |
9.5 |
Poecile palustris |
49.7 |
50.3 |
345 |
141 |
235 |
257 |
11.9 |
Parus major |
49.8 |
50.2 |
353 |
134 |
234 |
257 |
15.4 |
Stats for ND2 (group size: 3 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Periparus ater |
49.6 |
50.4 |
403 |
113 |
220 |
304 |
9.5 |
Poecile palustris |
50.9 |
49.1 |
410 |
119 |
209 |
302 |
11.9 |
Parus major |
47.9 |
52.1 |
394 |
104 |
218 |
324 |
15.4 |
Stats for ND3 (group size: 3 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Periparus ater |
49.9 |
50.1 |
123 |
52 |
85 |
91 |
9.5 |
Poecile palustris |
50.7 |
49.3 |
127 |
48 |
81 |
89 |
11.9 |
Parus major |
46.7 |
53.3 |
119 |
45 |
88 |
99 |
15.4 |
Stats for ND4 (group size: 3 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Periparus ater |
50.4 |
49.6 |
543 |
151 |
296 |
388 |
9.5 |
Poecile palustris |
50.1 |
49.9 |
534 |
157 |
309 |
378 |
11.9 |
Parus major |
48.4 |
51.6 |
528 |
139 |
306 |
405 |
15.4 |
Stats for ND4L (group size: 3 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Periparus ater |
51.9 |
48.1 |
110 |
44 |
69 |
74 |
9.5 |
Poecile palustris |
50.5 |
49.5 |
106 |
44 |
72 |
75 |
11.9 |
Parus major |
47.1 |
52.9 |
104 |
36 |
73 |
84 |
15.4 |
Stats for ND5 (group size: 3 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Periparus ater |
48.8 |
51.2 |
673 |
215 |
402 |
528 |
9.5 |
Poecile palustris |
49.2 |
50.8 |
668 |
227 |
394 |
529 |
11.9 |
Parus major |
48.0 |
52.0 |
661 |
211 |
397 |
549 |
15.4 |
Stats for ND6 (group size: 3 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Periparus ater |
50.3 |
49.7 |
209 |
52 |
54 |
204 |
9.5 |
Poecile palustris |
48.4 |
51.6 |
195 |
55 |
60 |
206 |
11.9 |
Parus major |
47.4 |
52.6 |
198 |
48 |
64 |
209 |
15.4 |
Stats for 12S rRNA gene (group size: 3 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Periparus ater |
49.7 |
50.3 |
280 |
207 |
197 |
295 |
9.5 |
Poecile palustris |
49.9 |
50.1 |
282 |
211 |
200 |
294 |
11.9 |
Parus major |
49.8 |
50.2 |
280 |
208 |
197 |
295 |
15.4 |
Stats for 16S rRNA gene (group size: 3 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Periparus ater |
45.4 |
54.6 |
410 |
316 |
324 |
550 |
9.5 |
Poecile palustris |
45.1 |
54.9 |
407 |
315 |
329 |
550 |
11.9 |
Parus major |
45.0 |
55.0 |
403 |
318 |
331 |
549 |
15.4 |
Contact: Vadim E. Fraifeld, MD, PhD
Head: Lab for the Biology of Aging,
The Shraga Segal Department of Microbiology, Immunology and Genetics,
Faculty of Health Sciences, Ben-Gurion University of the Negev
P.O. Box 653, Beer-Sheva 8410501, Israel
Email:
- How to cite us:
-
If you would like to cite this database please use:
Toren D, Barzilay T, Tacutu R, Lehmann G, Muradian KK, Fraifeld VE.
MitoAge: a database for comparative analysis of mitochondrial DNA, with a special focus on animal longevity.
Nucleic Acids Res. 2016; 44(D1):D1262-5.