Stats for family Macropodidae
Stats for total mtDNA (group size: 3 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Macropus giganteus |
39.6 |
60.4 |
4528 |
2157 |
4599 |
5603 |
25.0 |
Lagorchestes hirsutus |
38.8 |
61.2 |
4416 |
2145 |
4734 |
5594 |
13.2 |
Macropus robustus |
39.2 |
60.8 |
4441 |
2179 |
4670 |
5606 |
22.0 |
Stats for total protein-coding genes (group size: 3 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Macropus giganteus |
40.8 |
59.2 |
3289 |
1333 |
3140 |
3571 |
25.0 |
Lagorchestes hirsutus |
40.1 |
59.9 |
3217 |
1325 |
3218 |
3568 |
13.2 |
Macropus robustus |
40.4 |
59.6 |
3226 |
1346 |
3201 |
3555 |
22.0 |
Stats for D-loop (group size: 2 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Macropus giganteus |
33.8 |
66.2 |
321 |
159 |
411 |
531 |
25.0 |
Lagorchestes hirsutus |
33.1 |
66.9 |
321 |
153 |
428 |
531 |
13.2 |
Stats for total tRNA-coding genes (group size: 3 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Macropus giganteus |
35.0 |
65.0 |
322 |
211 |
455 |
535 |
25.0 |
Lagorchestes hirsutus |
35.3 |
64.7 |
309 |
216 |
446 |
516 |
13.2 |
Macropus robustus |
35.1 |
64.9 |
321 |
209 |
449 |
530 |
22.0 |
Stats for total rRNA-coding genes (group size: 3 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Macropus giganteus |
39.8 |
60.2 |
570 |
434 |
583 |
938 |
25.0 |
Lagorchestes hirsutus |
38.1 |
61.9 |
532 |
423 |
615 |
939 |
13.2 |
Macropus robustus |
38.7 |
61.3 |
548 |
427 |
598 |
948 |
22.0 |
Stats for ATP6 (group size: 3 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Macropus giganteus |
40.2 |
59.8 |
205 |
69 |
198 |
209 |
25.0 |
Lagorchestes hirsutus |
39.8 |
60.2 |
203 |
68 |
199 |
211 |
13.2 |
Macropus robustus |
39.6 |
60.4 |
203 |
67 |
200 |
211 |
22.0 |
Stats for ATP8 (group size: 3 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Macropus giganteus |
35.7 |
64.3 |
62 |
13 |
51 |
84 |
25.0 |
Lagorchestes hirsutus |
35.7 |
64.3 |
62 |
13 |
52 |
83 |
13.2 |
Macropus robustus |
33.3 |
66.7 |
56 |
14 |
57 |
83 |
22.0 |
Stats for COX1 (group size: 3 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Macropus giganteus |
42.0 |
58.0 |
394 |
254 |
473 |
421 |
25.0 |
Lagorchestes hirsutus |
39.8 |
60.2 |
369 |
245 |
492 |
436 |
13.2 |
Macropus robustus |
41.2 |
58.8 |
376 |
260 |
490 |
416 |
22.0 |
Stats for COX2 (group size: 3 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Macropus giganteus |
38.2 |
61.8 |
172 |
93 |
196 |
232 |
25.0 |
Lagorchestes hirsutus |
36.7 |
63.3 |
150 |
100 |
209 |
223 |
13.2 |
Macropus robustus |
38.3 |
61.7 |
171 |
90 |
190 |
231 |
22.0 |
Stats for COX3 (group size: 3 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Macropus giganteus |
43.4 |
56.6 |
227 |
113 |
232 |
212 |
25.0 |
Lagorchestes hirsutus |
44.4 |
55.6 |
230 |
118 |
236 |
200 |
13.2 |
Macropus robustus |
43.2 |
56.8 |
224 |
115 |
233 |
212 |
22.0 |
Stats for CYTB (group size: 3 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Macropus giganteus |
44.4 |
55.6 |
368 |
141 |
292 |
345 |
25.0 |
Lagorchestes hirsutus |
43.7 |
56.3 |
352 |
149 |
308 |
337 |
13.2 |
Macropus robustus |
43.5 |
56.5 |
355 |
143 |
312 |
336 |
22.0 |
Stats for ND1 (group size: 3 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Macropus giganteus |
41.8 |
58.2 |
292 |
108 |
261 |
296 |
25.0 |
Lagorchestes hirsutus |
41.0 |
59.0 |
280 |
112 |
278 |
287 |
13.2 |
Macropus robustus |
41.5 |
58.5 |
287 |
110 |
271 |
289 |
22.0 |
Stats for ND2 (group size: 3 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Macropus giganteus |
39.7 |
60.3 |
325 |
89 |
279 |
351 |
25.0 |
Lagorchestes hirsutus |
39.9 |
60.1 |
331 |
87 |
280 |
349 |
13.2 |
Macropus robustus |
40.8 |
59.2 |
333 |
94 |
281 |
339 |
22.0 |
Stats for ND3 (group size: 3 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Macropus giganteus |
41.6 |
58.4 |
107 |
37 |
104 |
98 |
25.0 |
Lagorchestes hirsutus |
38.4 |
61.6 |
98 |
36 |
112 |
103 |
13.2 |
Macropus robustus |
39.3 |
60.7 |
98 |
39 |
111 |
101 |
22.0 |
Stats for ND4 (group size: 3 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Macropus giganteus |
39.5 |
60.5 |
391 |
153 |
398 |
436 |
25.0 |
Lagorchestes hirsutus |
39.2 |
60.8 |
398 |
142 |
388 |
450 |
13.2 |
Macropus robustus |
39.9 |
60.1 |
402 |
148 |
377 |
451 |
22.0 |
Stats for ND4L (group size: 3 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Macropus giganteus |
39.7 |
60.3 |
84 |
34 |
91 |
88 |
25.0 |
Lagorchestes hirsutus |
38.7 |
61.3 |
79 |
36 |
99 |
83 |
13.2 |
Macropus robustus |
40.7 |
59.3 |
85 |
36 |
90 |
86 |
22.0 |
Stats for ND5 (group size: 3 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Macropus giganteus |
40.3 |
59.7 |
536 |
193 |
483 |
597 |
25.0 |
Lagorchestes hirsutus |
39.5 |
60.5 |
527 |
187 |
494 |
601 |
13.2 |
Macropus robustus |
39.2 |
60.8 |
512 |
197 |
505 |
595 |
22.0 |
Stats for ND6 (group size: 3 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Macropus giganteus |
36.5 |
63.5 |
142 |
42 |
98 |
222 |
25.0 |
Lagorchestes hirsutus |
38.1 |
61.9 |
155 |
37 |
87 |
225 |
13.2 |
Macropus robustus |
35.1 |
64.9 |
139 |
38 |
101 |
226 |
22.0 |
Stats for 12S rRNA gene (group size: 3 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Macropus giganteus |
40.6 |
59.4 |
213 |
174 |
211 |
356 |
25.0 |
Lagorchestes hirsutus |
39.5 |
60.5 |
206 |
169 |
216 |
358 |
13.2 |
Macropus robustus |
40.3 |
59.7 |
211 |
171 |
214 |
353 |
22.0 |
Stats for 16S rRNA gene (group size: 3 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Macropus giganteus |
39.3 |
60.7 |
357 |
260 |
372 |
582 |
25.0 |
Lagorchestes hirsutus |
37.2 |
62.8 |
326 |
254 |
399 |
581 |
13.2 |
Macropus robustus |
37.7 |
62.3 |
337 |
256 |
384 |
595 |
22.0 |
Contact: Vadim E. Fraifeld, MD, PhD
Head: Lab for the Biology of Aging,
The Shraga Segal Department of Microbiology, Immunology and Genetics,
Faculty of Health Sciences, Ben-Gurion University of the Negev
P.O. Box 653, Beer-Sheva 8410501, Israel
Email:
- How to cite us:
-
If you would like to cite this database please use:
Toren D, Barzilay T, Tacutu R, Lehmann G, Muradian KK, Fraifeld VE.
MitoAge: a database for comparative analysis of mitochondrial DNA, with a special focus on animal longevity.
Nucleic Acids Res. 2016; 44(D1):D1262-5.