Stats for family Embiotocidae
Stats for total mtDNA (group size: 1 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Cymatogaster aggregata |
43.9 |
56.1 |
4565 |
2689 |
4677 |
4602 |
8.0 |
Stats for total protein-coding genes (group size: 1 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Cymatogaster aggregata |
44.3 |
55.7 |
3367 |
1709 |
3407 |
2969 |
8.0 |
Stats for D-loop (group size: 1 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Cymatogaster aggregata |
35.1 |
64.9 |
164 |
124 |
273 |
259 |
8.0 |
Stats for total tRNA-coding genes (group size: 1 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Cymatogaster aggregata |
43.7 |
56.3 |
383 |
296 |
394 |
482 |
8.0 |
Stats for total rRNA-coding genes (group size: 1 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Cymatogaster aggregata |
44.9 |
55.1 |
636 |
548 |
582 |
873 |
8.0 |
Stats for ATP6 (group size: 1 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Cymatogaster aggregata |
44.2 |
55.8 |
212 |
90 |
213 |
168 |
8.0 |
Stats for ATP8 (group size: 1 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Cymatogaster aggregata |
41.7 |
58.3 |
49 |
21 |
47 |
51 |
8.0 |
Stats for COX1 (group size: 1 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Cymatogaster aggregata |
46.1 |
53.9 |
445 |
291 |
474 |
386 |
8.0 |
Stats for COX2 (group size: 1 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Cymatogaster aggregata |
43.3 |
56.7 |
184 |
115 |
205 |
187 |
8.0 |
Stats for COX3 (group size: 1 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Cymatogaster aggregata |
45.7 |
54.3 |
220 |
139 |
236 |
190 |
8.0 |
Stats for CYTB (group size: 1 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Cymatogaster aggregata |
42.8 |
57.2 |
320 |
168 |
374 |
279 |
8.0 |
Stats for ND1 (group size: 1 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Cymatogaster aggregata |
42.7 |
57.3 |
273 |
143 |
317 |
242 |
8.0 |
Stats for ND2 (group size: 1 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Cymatogaster aggregata |
45.9 |
54.1 |
349 |
131 |
292 |
274 |
8.0 |
Stats for ND3 (group size: 1 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Cymatogaster aggregata |
47.0 |
53.0 |
109 |
55 |
115 |
70 |
8.0 |
Stats for ND4 (group size: 1 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Cymatogaster aggregata |
45.3 |
54.7 |
427 |
199 |
397 |
358 |
8.0 |
Stats for ND4L (group size: 1 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Cymatogaster aggregata |
47.1 |
52.9 |
93 |
47 |
89 |
68 |
8.0 |
Stats for ND5 (group size: 1 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Cymatogaster aggregata |
41.7 |
58.3 |
523 |
244 |
560 |
512 |
8.0 |
Stats for ND6 (group size: 1 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Cymatogaster aggregata |
45.0 |
55.0 |
167 |
68 |
93 |
194 |
8.0 |
Stats for 12S rRNA gene (group size: 1 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Cymatogaster aggregata |
47.0 |
53.0 |
236 |
209 |
206 |
295 |
8.0 |
Stats for 16S rRNA gene (group size: 1 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Cymatogaster aggregata |
43.7 |
56.3 |
400 |
339 |
376 |
578 |
8.0 |
Contact: Vadim E. Fraifeld, MD, PhD
Head: Lab for the Biology of Aging,
The Shraga Segal Department of Microbiology, Immunology and Genetics,
Faculty of Health Sciences, Ben-Gurion University of the Negev
P.O. Box 653, Beer-Sheva 8410501, Israel
Email:
- How to cite us:
-
If you would like to cite this database please use:
Toren D, Barzilay T, Tacutu R, Lehmann G, Muradian KK, Fraifeld VE.
MitoAge: a database for comparative analysis of mitochondrial DNA, with a special focus on animal longevity.
Nucleic Acids Res. 2016; 44(D1):D1262-5.