Stats for family Bombinatoridae

Stats for total mtDNA (group size: 2 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Bombina variegata 42.1 57.9 4837 2966 5179 5569 29.0
Bombina orientalis 42.2 57.8 4761 2771 4966 5349 15.8
Stats for total protein-coding genes (group size: 2 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Bombina variegata 43.5 56.5 3247 1688 3168 3239 29.0
Bombina orientalis 43.3 56.7 3254 1659 3211 3217 15.8
Stats for D-loop (group size: 2 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Bombina variegata 33.6 66.4 556 479 1058 983 29.0
Bombina orientalis 33.8 66.2 473 329 807 763 15.8
Stats for total tRNA-coding genes (group size: 2 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Bombina variegata 44.6 55.4 387 296 381 469 29.0
Bombina orientalis 43.7 56.3 383 287 389 475 15.8
Stats for total rRNA-coding genes (group size: 2 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Bombina variegata 44.1 55.9 629 489 552 864 29.0
Bombina orientalis 44.1 55.9 633 483 539 877 15.8
Stats for ATP6 (group size: 2 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Bombina variegata 41.2 58.8 196 86 213 189 29.0
Bombina orientalis 41.5 58.5 201 83 205 195 15.8
Stats for ATP8 (group size: 2 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Bombina variegata 39.9 60.1 51 16 39 62 29.0
Bombina orientalis 41.1 58.9 52 17 37 62 15.8
Stats for COX1 (group size: 2 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Bombina variegata 45.2 54.8 400 302 463 389 29.0
Bombina orientalis 44.5 55.5 408 283 456 407 15.8
Stats for COX2 (group size: 2 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Bombina variegata 42.2 57.8 181 109 174 224 29.0
Bombina orientalis 40.6 59.4 172 107 195 214 15.8
Stats for COX3 (group size: 2 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Bombina variegata 46.7 53.3 227 139 220 198 29.0
Bombina orientalis 44.9 55.1 216 136 236 196 15.8
Stats for CYTB (group size: 2 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Bombina variegata 44.3 55.7 340 166 329 306 29.0
Bombina orientalis 44.7 55.3 343 167 334 297 15.8
Stats for ND1 (group size: 2 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Bombina variegata 42.7 57.3 269 142 294 258 29.0
Bombina orientalis 42.8 57.2 276 136 297 253 15.8
Stats for ND2 (group size: 2 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Bombina variegata 42.9 57.1 325 123 266 331 29.0
Bombina orientalis 44.0 56.0 328 132 261 324 15.8
Stats for ND3 (group size: 2 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Bombina variegata 40.5 59.5 86 53 116 88 29.0
Bombina orientalis 42.9 57.1 94 53 114 82 15.8
Stats for ND4 (group size: 2 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Bombina variegata 43.0 57.0 405 187 390 396 29.0
Bombina orientalis 43.1 56.9 405 189 398 386 15.8
Stats for ND4L (group size: 2 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Bombina variegata 50.2 49.8 97 52 84 64 29.0
Bombina orientalis 49.2 50.8 94 52 85 66 15.8
Stats for ND5 (group size: 2 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Bombina variegata 41.7 58.3 509 246 517 537 29.0
Bombina orientalis 41.5 58.5 514 236 523 536 15.8
Stats for ND6 (group size: 2 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Bombina variegata 45.9 54.1 165 69 69 207 29.0
Bombina orientalis 44.1 55.9 155 70 76 209 15.8
Stats for 12S rRNA gene (group size: 2 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Bombina variegata 47.2 52.8 252 188 190 303 29.0
Bombina orientalis 47.3 52.7 249 192 184 308 15.8
Stats for 16S rRNA gene (group size: 2 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Bombina variegata 42.3 57.7 377 301 362 561 29.0
Bombina orientalis 42.2 57.8 384 291 355 569 15.8

Contact: Vadim E. Fraifeld, MD, PhD

Head: Lab for the Biology of Aging, The Shraga Segal Department of Microbiology, Immunology and Genetics, Faculty of Health Sciences, Ben-Gurion University of the Negev
P.O. Box 653, Beer-Sheva 8410501, Israel

Email:
How to cite us:

If you would like to cite this database please use:
Toren D, Barzilay T, Tacutu R, Lehmann G, Muradian KK, Fraifeld VE. MitoAge: a database for comparative analysis of mitochondrial DNA, with a special focus on animal longevity. Nucleic Acids Res. 2016; 44(D1):D1262-5.