Stats for family Bombinatoridae
Stats for total mtDNA (group size: 2 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Bombina variegata |
42.1 |
57.9 |
4837 |
2966 |
5179 |
5569 |
29.0 |
Bombina orientalis |
42.2 |
57.8 |
4761 |
2771 |
4966 |
5349 |
15.8 |
Stats for total protein-coding genes (group size: 2 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Bombina variegata |
43.5 |
56.5 |
3247 |
1688 |
3168 |
3239 |
29.0 |
Bombina orientalis |
43.3 |
56.7 |
3254 |
1659 |
3211 |
3217 |
15.8 |
Stats for D-loop (group size: 2 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Bombina variegata |
33.6 |
66.4 |
556 |
479 |
1058 |
983 |
29.0 |
Bombina orientalis |
33.8 |
66.2 |
473 |
329 |
807 |
763 |
15.8 |
Stats for total tRNA-coding genes (group size: 2 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Bombina variegata |
44.6 |
55.4 |
387 |
296 |
381 |
469 |
29.0 |
Bombina orientalis |
43.7 |
56.3 |
383 |
287 |
389 |
475 |
15.8 |
Stats for total rRNA-coding genes (group size: 2 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Bombina variegata |
44.1 |
55.9 |
629 |
489 |
552 |
864 |
29.0 |
Bombina orientalis |
44.1 |
55.9 |
633 |
483 |
539 |
877 |
15.8 |
Stats for ATP6 (group size: 2 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Bombina variegata |
41.2 |
58.8 |
196 |
86 |
213 |
189 |
29.0 |
Bombina orientalis |
41.5 |
58.5 |
201 |
83 |
205 |
195 |
15.8 |
Stats for ATP8 (group size: 2 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Bombina variegata |
39.9 |
60.1 |
51 |
16 |
39 |
62 |
29.0 |
Bombina orientalis |
41.1 |
58.9 |
52 |
17 |
37 |
62 |
15.8 |
Stats for COX1 (group size: 2 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Bombina variegata |
45.2 |
54.8 |
400 |
302 |
463 |
389 |
29.0 |
Bombina orientalis |
44.5 |
55.5 |
408 |
283 |
456 |
407 |
15.8 |
Stats for COX2 (group size: 2 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Bombina variegata |
42.2 |
57.8 |
181 |
109 |
174 |
224 |
29.0 |
Bombina orientalis |
40.6 |
59.4 |
172 |
107 |
195 |
214 |
15.8 |
Stats for COX3 (group size: 2 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Bombina variegata |
46.7 |
53.3 |
227 |
139 |
220 |
198 |
29.0 |
Bombina orientalis |
44.9 |
55.1 |
216 |
136 |
236 |
196 |
15.8 |
Stats for CYTB (group size: 2 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Bombina variegata |
44.3 |
55.7 |
340 |
166 |
329 |
306 |
29.0 |
Bombina orientalis |
44.7 |
55.3 |
343 |
167 |
334 |
297 |
15.8 |
Stats for ND1 (group size: 2 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Bombina variegata |
42.7 |
57.3 |
269 |
142 |
294 |
258 |
29.0 |
Bombina orientalis |
42.8 |
57.2 |
276 |
136 |
297 |
253 |
15.8 |
Stats for ND2 (group size: 2 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Bombina variegata |
42.9 |
57.1 |
325 |
123 |
266 |
331 |
29.0 |
Bombina orientalis |
44.0 |
56.0 |
328 |
132 |
261 |
324 |
15.8 |
Stats for ND3 (group size: 2 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Bombina variegata |
40.5 |
59.5 |
86 |
53 |
116 |
88 |
29.0 |
Bombina orientalis |
42.9 |
57.1 |
94 |
53 |
114 |
82 |
15.8 |
Stats for ND4 (group size: 2 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Bombina variegata |
43.0 |
57.0 |
405 |
187 |
390 |
396 |
29.0 |
Bombina orientalis |
43.1 |
56.9 |
405 |
189 |
398 |
386 |
15.8 |
Stats for ND4L (group size: 2 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Bombina variegata |
50.2 |
49.8 |
97 |
52 |
84 |
64 |
29.0 |
Bombina orientalis |
49.2 |
50.8 |
94 |
52 |
85 |
66 |
15.8 |
Stats for ND5 (group size: 2 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Bombina variegata |
41.7 |
58.3 |
509 |
246 |
517 |
537 |
29.0 |
Bombina orientalis |
41.5 |
58.5 |
514 |
236 |
523 |
536 |
15.8 |
Stats for ND6 (group size: 2 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Bombina variegata |
45.9 |
54.1 |
165 |
69 |
69 |
207 |
29.0 |
Bombina orientalis |
44.1 |
55.9 |
155 |
70 |
76 |
209 |
15.8 |
Stats for 12S rRNA gene (group size: 2 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Bombina variegata |
47.2 |
52.8 |
252 |
188 |
190 |
303 |
29.0 |
Bombina orientalis |
47.3 |
52.7 |
249 |
192 |
184 |
308 |
15.8 |
Stats for 16S rRNA gene (group size: 2 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Bombina variegata |
42.3 |
57.7 |
377 |
301 |
362 |
561 |
29.0 |
Bombina orientalis |
42.2 |
57.8 |
384 |
291 |
355 |
569 |
15.8 |
Contact: Vadim E. Fraifeld, MD, PhD
Head: Lab for the Biology of Aging,
The Shraga Segal Department of Microbiology, Immunology and Genetics,
Faculty of Health Sciences, Ben-Gurion University of the Negev
P.O. Box 653, Beer-Sheva 8410501, Israel
Email:
- How to cite us:
-
If you would like to cite this database please use:
Toren D, Barzilay T, Tacutu R, Lehmann G, Muradian KK, Fraifeld VE.
MitoAge: a database for comparative analysis of mitochondrial DNA, with a special focus on animal longevity.
Nucleic Acids Res. 2016; 44(D1):D1262-5.