Stats for family Dasyuridae
Species in family:
| Stats for total mtDNA (group size: 4 species) | |||||||
|---|---|---|---|---|---|---|---|
| Species | GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) |
| Dasyurus hallucatus | 36.3 | 63.7 | 3941 | 2285 | 5406 | 5526 | 5.9 |
| Sminthopsis crassicaudata | 38.7 | 61.3 | 4226 | 2497 | 5217 | 5423 | 5.0 |
| Sarcophilus harrisii | 37.4 | 62.6 | 4142 | 2254 | 5188 | 5533 | 13.0 |
| Phascogale tapoatafa | 39.4 | 60.6 | 4379 | 2475 | 5123 | 5425 | 5.9 |
| Stats for total protein-coding genes (group size: 4 species) | |||||||
|---|---|---|---|---|---|---|---|
| Species | GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) |
| Dasyurus hallucatus | 36.5 | 63.4 | 2794 | 1350 | 3697 | 3496 | 5.9 |
| Sminthopsis crassicaudata | 39.5 | 60.5 | 3015 | 1456 | 3480 | 3373 | 5.0 |
| Sarcophilus harrisii | 38.1 | 61.9 | 2982 | 1335 | 3498 | 3509 | 13.0 |
| Phascogale tapoatafa | 40.6 | 59.4 | 3170 | 1424 | 3374 | 3359 | 5.9 |
| Stats for D-loop (group size: 1 species) | |||||||
|---|---|---|---|---|---|---|---|
| Species | GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) |
| Phascogale tapoatafa | 34.0 | 65.8 | 335 | 319 | 626 | 639 | 5.9 |
| Stats for total tRNA-coding genes (group size: 4 species) | |||||||
|---|---|---|---|---|---|---|---|
| Species | GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) |
| Dasyurus hallucatus | 36.3 | 63.7 | 319 | 224 | 436 | 518 | 5.9 |
| Sminthopsis crassicaudata | 34.8 | 65.2 | 307 | 216 | 451 | 529 | 5.0 |
| Sarcophilus harrisii | 35.6 | 64.4 | 314 | 217 | 443 | 518 | 13.0 |
| Phascogale tapoatafa | 36.6 | 63.4 | 322 | 229 | 431 | 524 | 5.9 |
| Stats for total rRNA-coding genes (group size: 4 species) | |||||||
|---|---|---|---|---|---|---|---|
| Species | GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) |
| Dasyurus hallucatus | 38.8 | 61.2 | 526 | 453 | 648 | 897 | 5.9 |
| Sminthopsis crassicaudata | 39.6 | 60.4 | 544 | 460 | 642 | 890 | 5.0 |
| Sarcophilus harrisii | 38.6 | 61.4 | 529 | 444 | 640 | 906 | 13.0 |
| Phascogale tapoatafa | 40.2 | 59.8 | 522 | 492 | 654 | 857 | 5.9 |
| Stats for ATP6 (group size: 4 species) | |||||||
|---|---|---|---|---|---|---|---|
| Species | GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) |
| Dasyurus hallucatus | 34.8 | 65.2 | 176 | 61 | 235 | 209 | 5.9 |
| Sminthopsis crassicaudata | 39.8 | 60.2 | 193 | 78 | 221 | 189 | 5.0 |
| Sarcophilus harrisii | 36.6 | 63.4 | 184 | 65 | 224 | 208 | 13.0 |
| Phascogale tapoatafa | 39.2 | 60.8 | 198 | 69 | 218 | 196 | 5.9 |
| Stats for ATP8 (group size: 4 species) | |||||||
|---|---|---|---|---|---|---|---|
| Species | GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) |
| Dasyurus hallucatus | 35.7 | 64.3 | 51 | 24 | 67 | 68 | 5.9 |
| Sminthopsis crassicaudata | 39.5 | 60.5 | 57 | 26 | 64 | 63 | 5.0 |
| Sarcophilus harrisii | 34.9 | 65.1 | 51 | 22 | 67 | 69 | 13.0 |
| Phascogale tapoatafa | 36.7 | 63.3 | 52 | 25 | 67 | 66 | 5.9 |
| Stats for COX1 (group size: 4 species) | |||||||
|---|---|---|---|---|---|---|---|
| Species | GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) |
| Dasyurus hallucatus | 38.4 | 61.6 | 339 | 253 | 536 | 414 | 5.9 |
| Sminthopsis crassicaudata | 39.4 | 60.6 | 349 | 259 | 520 | 414 | 5.0 |
| Sarcophilus harrisii | 39.6 | 60.4 | 360 | 250 | 508 | 424 | 13.0 |
| Phascogale tapoatafa | 41.1 | 58.9 | 389 | 245 | 484 | 424 | 5.9 |
| Stats for COX2 (group size: 4 species) | |||||||
|---|---|---|---|---|---|---|---|
| Species | GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) |
| Dasyurus hallucatus | 38.5 | 61.3 | 166 | 98 | 207 | 213 | 5.9 |
| Sminthopsis crassicaudata | 38.3 | 61.7 | 169 | 92 | 199 | 222 | 5.0 |
| Sarcophilus harrisii | 36.5 | 63.5 | 156 | 93 | 211 | 222 | 13.0 |
| Phascogale tapoatafa | 40.3 | 59.7 | 179 | 96 | 194 | 213 | 5.9 |
| Stats for COX3 (group size: 4 species) | |||||||
|---|---|---|---|---|---|---|---|
| Species | GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) |
| Dasyurus hallucatus | 38.4 | 61.6 | 186 | 115 | 260 | 223 | 5.9 |
| Sminthopsis crassicaudata | 43.4 | 56.6 | 219 | 121 | 236 | 208 | 5.0 |
| Sarcophilus harrisii | 41.6 | 58.4 | 203 | 123 | 249 | 209 | 13.0 |
| Phascogale tapoatafa | 43.8 | 56.3 | 226 | 117 | 235 | 206 | 5.9 |
| Stats for CYTB (group size: 4 species) | |||||||
|---|---|---|---|---|---|---|---|
| Species | GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) |
| Dasyurus hallucatus | 39.4 | 60.6 | 301 | 151 | 377 | 317 | 5.9 |
| Sminthopsis crassicaudata | 42.5 | 57.5 | 330 | 157 | 342 | 317 | 5.0 |
| Sarcophilus harrisii | 40.6 | 59.4 | 325 | 140 | 353 | 328 | 13.0 |
| Phascogale tapoatafa | 44.9 | 55.1 | 364 | 151 | 316 | 315 | 5.9 |
| Stats for ND1 (group size: 4 species) | |||||||
|---|---|---|---|---|---|---|---|
| Species | GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) |
| Dasyurus hallucatus | 37.1 | 62.9 | 246 | 109 | 314 | 288 | 5.9 |
| Sminthopsis crassicaudata | 39.3 | 60.7 | 258 | 118 | 303 | 278 | 5.0 |
| Sarcophilus harrisii | 37.4 | 62.6 | 256 | 102 | 296 | 303 | 13.0 |
| Phascogale tapoatafa | 40.6 | 59.4 | 261 | 128 | 317 | 251 | 5.9 |
| Stats for ND2 (group size: 4 species) | |||||||
|---|---|---|---|---|---|---|---|
| Species | GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) |
| Dasyurus hallucatus | 36.1 | 63.9 | 277 | 100 | 321 | 346 | 5.9 |
| Sminthopsis crassicaudata | 38.1 | 61.9 | 293 | 105 | 305 | 341 | 5.0 |
| Sarcophilus harrisii | 38.7 | 61.3 | 304 | 100 | 294 | 346 | 13.0 |
| Phascogale tapoatafa | 39.3 | 60.7 | 287 | 123 | 317 | 317 | 5.9 |
| Stats for ND3 (group size: 4 species) | |||||||
|---|---|---|---|---|---|---|---|
| Species | GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) |
| Dasyurus hallucatus | 38.2 | 61.8 | 92 | 41 | 119 | 96 | 5.9 |
| Sminthopsis crassicaudata | 39.9 | 60.1 | 92 | 47 | 117 | 92 | 5.0 |
| Sarcophilus harrisii | 38.4 | 61.6 | 93 | 40 | 114 | 99 | 13.0 |
| Phascogale tapoatafa | 41.6 | 58.4 | 102 | 44 | 104 | 101 | 5.9 |
| Stats for ND4 (group size: 4 species) | |||||||
|---|---|---|---|---|---|---|---|
| Species | GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) |
| Dasyurus hallucatus | 35.0 | 65.0 | 340 | 142 | 473 | 423 | 5.9 |
| Sminthopsis crassicaudata | 39.8 | 60.2 | 382 | 165 | 419 | 410 | 5.0 |
| Sarcophilus harrisii | 37.9 | 62.1 | 377 | 145 | 445 | 411 | 13.0 |
| Phascogale tapoatafa | 40.3 | 59.7 | 404 | 152 | 414 | 408 | 5.9 |
| Stats for ND4L (group size: 4 species) | |||||||
|---|---|---|---|---|---|---|---|
| Species | GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) |
| Dasyurus hallucatus | 34.7 | 65.3 | 69 | 34 | 103 | 91 | 5.9 |
| Sminthopsis crassicaudata | 38.4 | 61.6 | 81 | 33 | 101 | 82 | 5.0 |
| Sarcophilus harrisii | 33.7 | 66.3 | 69 | 31 | 106 | 91 | 13.0 |
| Phascogale tapoatafa | 40.4 | 59.6 | 79 | 41 | 101 | 76 | 5.9 |
| Stats for ND5 (group size: 4 species) | |||||||
|---|---|---|---|---|---|---|---|
| Species | GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) |
| Dasyurus hallucatus | 34.5 | 65.5 | 433 | 194 | 593 | 598 | 5.9 |
| Sminthopsis crassicaudata | 38.0 | 62.0 | 474 | 216 | 558 | 567 | 5.0 |
| Sarcophilus harrisii | 36.5 | 63.5 | 469 | 191 | 548 | 601 | 13.0 |
| Phascogale tapoatafa | 38.2 | 61.8 | 493 | 198 | 531 | 585 | 5.9 |
| Stats for ND6 (group size: 4 species) | |||||||
|---|---|---|---|---|---|---|---|
| Species | GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) |
| Dasyurus hallucatus | 32.9 | 67.1 | 131 | 34 | 110 | 226 | 5.9 |
| Sminthopsis crassicaudata | 34.9 | 65.1 | 130 | 45 | 116 | 210 | 5.0 |
| Sarcophilus harrisii | 36.9 | 63.1 | 147 | 38 | 102 | 214 | 13.0 |
| Phascogale tapoatafa | 37.7 | 62.3 | 148 | 41 | 95 | 217 | 5.9 |
| Stats for 12S rRNA gene (group size: 4 species) | |||||||
|---|---|---|---|---|---|---|---|
| Species | GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) |
| Dasyurus hallucatus | 41.5 | 58.5 | 207 | 187 | 229 | 327 | 5.9 |
| Sminthopsis crassicaudata | 41.6 | 58.4 | 209 | 188 | 227 | 331 | 5.0 |
| Sarcophilus harrisii | 40.6 | 59.4 | 210 | 176 | 224 | 341 | 13.0 |
| Phascogale tapoatafa | 42.6 | 57.4 | 202 | 204 | 234 | 313 | 5.9 |
| Stats for 16S rRNA gene (group size: 4 species) | |||||||
|---|---|---|---|---|---|---|---|
| Species | GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) |
| Dasyurus hallucatus | 37.2 | 62.8 | 319 | 266 | 419 | 570 | 5.9 |
| Sminthopsis crassicaudata | 38.4 | 61.6 | 335 | 272 | 415 | 559 | 5.0 |
| Sarcophilus harrisii | 37.4 | 62.6 | 319 | 268 | 416 | 565 | 13.0 |
| Phascogale tapoatafa | 38.7 | 61.3 | 320 | 288 | 420 | 544 | 5.9 |
Contact: Vadim E. Fraifeld, MD, PhD
Head: Lab for the Biology of Aging, The Shraga Segal Department of Microbiology, Immunology and Genetics, Faculty of Health Sciences, Ben-Gurion University of the Negev
P.O. Box 653, Beer-Sheva 8410501, Israel
Email:
Head: Lab for the Biology of Aging, The Shraga Segal Department of Microbiology, Immunology and Genetics, Faculty of Health Sciences, Ben-Gurion University of the Negev
P.O. Box 653, Beer-Sheva 8410501, Israel
Email:
- How to cite us:
-
If you would like to cite this database please use:
Toren D, Barzilay T, Tacutu R, Lehmann G, Muradian KK, Fraifeld VE. MitoAge: a database for comparative analysis of mitochondrial DNA, with a special focus on animal longevity. Nucleic Acids Res. 2016; 44(D1):D1262-5.
-
Quick links:
- Terms of use
- User guide
- Frequent questions
- Glossary & definitions