Stats for family Berycidae
Stats for total mtDNA (group size: 1 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Beryx splendens |
47.3 |
52.7 |
5085 |
2733 |
4035 |
4676 |
23.0 |
Stats for total protein-coding genes (group size: 1 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Beryx splendens |
48.3 |
51.7 |
3777 |
1727 |
2838 |
3064 |
23.0 |
Stats for D-loop (group size: 1 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Beryx splendens |
38.8 |
61.2 |
202 |
134 |
261 |
268 |
23.0 |
Stats for total tRNA-coding genes (group size: 1 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Beryx splendens |
45.0 |
55.0 |
391 |
309 |
383 |
471 |
23.0 |
Stats for total rRNA-coding genes (group size: 1 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Beryx splendens |
47.1 |
52.9 |
694 |
550 |
542 |
857 |
23.0 |
Stats for ATP6 (group size: 1 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Beryx splendens |
48.2 |
51.8 |
234 |
95 |
180 |
174 |
23.0 |
Stats for ATP8 (group size: 1 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Beryx splendens |
49.4 |
50.6 |
67 |
16 |
33 |
52 |
23.0 |
Stats for COX1 (group size: 1 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Beryx splendens |
48.1 |
51.9 |
452 |
294 |
418 |
387 |
23.0 |
Stats for COX2 (group size: 1 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Beryx splendens |
44.4 |
55.6 |
195 |
112 |
186 |
198 |
23.0 |
Stats for COX3 (group size: 1 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Beryx splendens |
47.4 |
52.6 |
242 |
130 |
211 |
202 |
23.0 |
Stats for CYTB (group size: 1 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Beryx splendens |
47.8 |
52.2 |
378 |
167 |
297 |
299 |
23.0 |
Stats for ND1 (group size: 1 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Beryx splendens |
49.8 |
50.2 |
335 |
151 |
244 |
245 |
23.0 |
Stats for ND2 (group size: 1 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Beryx splendens |
51.3 |
48.7 |
391 |
146 |
236 |
273 |
23.0 |
Stats for ND3 (group size: 1 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Beryx splendens |
51.0 |
49.0 |
125 |
53 |
100 |
71 |
23.0 |
Stats for ND4 (group size: 1 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Beryx splendens |
47.7 |
52.3 |
460 |
199 |
345 |
377 |
23.0 |
Stats for ND4L (group size: 1 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Beryx splendens |
51.5 |
48.5 |
106 |
47 |
78 |
66 |
23.0 |
Stats for ND5 (group size: 1 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Beryx splendens |
47.5 |
52.5 |
626 |
248 |
439 |
526 |
23.0 |
Stats for ND6 (group size: 1 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Beryx splendens |
46.4 |
53.6 |
171 |
71 |
77 |
203 |
23.0 |
Stats for 12S rRNA gene (group size: 1 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Beryx splendens |
49.5 |
50.5 |
260 |
210 |
194 |
285 |
23.0 |
Stats for 16S rRNA gene (group size: 1 species) |
Species |
GC (%) |
AT (%) |
G (bases) |
C (bases) |
A (bases) |
T (bases) |
Maximum lifespan (yrs) |
Beryx splendens |
45.7 |
54.3 |
434 |
340 |
348 |
572 |
23.0 |
Contact: Vadim E. Fraifeld, MD, PhD
Head: Lab for the Biology of Aging,
The Shraga Segal Department of Microbiology, Immunology and Genetics,
Faculty of Health Sciences, Ben-Gurion University of the Negev
P.O. Box 653, Beer-Sheva 8410501, Israel
Email:
- How to cite us:
-
If you would like to cite this database please use:
Toren D, Barzilay T, Tacutu R, Lehmann G, Muradian KK, Fraifeld VE.
MitoAge: a database for comparative analysis of mitochondrial DNA, with a special focus on animal longevity.
Nucleic Acids Res. 2016; 44(D1):D1262-5.