Stats for family Fringillidae

Species in family:
Vestiaria coccinea
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Stats for total mtDNA (group size: 16 species)
GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Range (min-max) 44.7 - 46.4% 53.6 - 55.3% 4894 - 5392 2052 - 2469 3704 - 4076 4657 - 5230 5.7 - 29.0
Median 45.6% 54.4% 5261 2399 4012 5127 11.0
Average ± stdev 45.5 ± 0.5% 54.5 ± 0.5% 5224 ± 121 2357 ± 106 3977 ± 111 5089 ± 160 12.5 ± 5.2
Coefficient of variation 0.01 0.01 0.02 0.05 0.03 0.03 0.41
Pearson correlation
coefficient with log10MLS		 0.48 -0.49 0.30 0.03 -0.28 -0.04 -
Pearson p-value
(two tailed)		 5.85E-02 5.54E-02 2.54E-01 9.16E-01 2.90E-01 8.75E-01 -
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Stats for total protein-coding genes (group size: 16 species)
GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Range (min-max) 45.4 - 47.4% 52.6 - 54.6% 3729 - 3951 1368 - 1504 2622 - 2757 3327 - 3465 5.7 - 29.0
Median 46.6% 53.5% 3856 1446 2705 3392 11.0
Average ± stdev 46.5 ± 0.6% 53.5 ± 0.6% 3847 ± 51 1438 ± 38 2697 ± 37 3393 ± 42 12.5 ± 5.2
Coefficient of variation 0.01 0.01 0.01 0.03 0.01 0.01 0.41
Pearson correlation
coefficient with log10MLS		 0.50 -0.50 0.57 0.10 -0.70 -0.17 -
Pearson p-value
(two tailed)		 5.12E-02 5.02E-02 2.06E-02 7.11E-01 2.52E-03 5.20E-01 -
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Stats for D-loop (group size: 0 species)
There is no data for D-loop in this group.
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Stats for total tRNA-coding genes (group size: 16 species)
GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Range (min-max) 40.7 - 42.2% 57.8 - 59.3% 353 - 380 252 - 271 377 - 403 483 - 518 5.7 - 29.0
Median 41.2% 58.8% 371 263 392 514 11.0
Average ± stdev 41.3 ± 0.3% 58.7 ± 0.4% 369 ± 6 263 ± 5 391 ± 6 507 ± 10 12.5 ± 5.2
Coefficient of variation 0.01 0.01 0.02 0.02 0.02 0.02 0.41
Pearson correlation
coefficient with log10MLS		 0.07 -0.16 0.12 -0.05 -0.38 0.17 -
Pearson p-value
(two tailed)		 7.91E-01 5.57E-01 6.59E-01 8.63E-01 1.50E-01 5.25E-01 -
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Stats for total rRNA-coding genes (group size: 16 species)
GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Range (min-max) 44.1 - 46.3% 53.7 - 55.7% 278 - 666 221 - 529 255 - 560 376 - 858 5.7 - 29.0
Median 45.4% 54.6% 646 523 552 849 11.0
Average ± stdev 45.4 ± 0.5% 54.6 ± 0.5% 606 ± 111 489 ± 89 518 ± 89 795 ± 143 12.5 ± 5.2
Coefficient of variation 0.01 0.01 0.18 0.18 0.17 0.18 0.41
Pearson correlation
coefficient with log10MLS		 0.42 -0.45 0.06 0.02 -0.02 -0.00 -
Pearson p-value
(two tailed)		 1.08E-01 8.07E-02 8.38E-01 9.39E-01 9.28E-01 9.92E-01 -
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Stats for ATP6 (group size: 16 species)
GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Range (min-max) 43.3 - 48.5% 51.5 - 56.7% 229 - 258 62 - 80 156 - 174 196 - 219 5.7 - 29.0
Median 45.2% 55.0% 241 67 168 207 11.0
Average ± stdev 45.3 ± 1.3% 54.7 ± 1.3% 241 ± 7 68 ± 4 166 ± 5 208 ± 5 12.5 ± 5.2
Coefficient of variation 0.03 0.02 0.03 0.06 0.03 0.03 0.41
Pearson correlation
coefficient with log10MLS		 0.31 -0.31 0.43 -0.14 -0.33 -0.15 -
Pearson p-value
(two tailed)		 2.44E-01 2.44E-01 9.87E-02 6.01E-01 2.09E-01 5.84E-01 -
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Stats for ATP8 (group size: 16 species)
GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Range (min-max) 40.5 - 46.4% 53.6 - 59.5% 57 - 66 11 - 15 42 - 50 47 - 54 5.7 - 29.0
Median 43.5% 56.5% 60 12 44 51 11.0
Average ± stdev 43.6 ± 1.9% 56.4 ± 1.9% 60 ± 2 12 ± 1 44 ± 1 50 ± 2 12.5 ± 5.2
Coefficient of variation 0.04 0.03 0.04 0.09 0.04 0.04 0.41
Pearson correlation
coefficient with log10MLS		 0.15 -0.15 0.11 0.15 -0.51 0.24 -
Pearson p-value
(two tailed)		 5.72E-01 5.72E-01 6.73E-01 5.89E-01 4.44E-02 3.65E-01 -
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Stats for COX1 (group size: 16 species)
GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Range (min-max) 46.2 - 48.7% 51.3 - 53.8% 462 - 497 243 - 269 370 - 395 421 - 444 5.7 - 29.0
Median 47.4% 52.6% 477 256 384 434 11.0
Average ± stdev 47.3 ± 0.7% 52.7 ± 0.7% 478 ± 8 255 ± 7 384 ± 7 432 ± 6 12.5 ± 5.2
Coefficient of variation 0.02 0.01 0.02 0.03 0.02 0.02 0.41
Pearson correlation
coefficient with log10MLS		 0.03 -0.02 -0.01 0.07 -0.23 0.21 -
Pearson p-value
(two tailed)		 9.01E-01 9.27E-01 9.58E-01 7.91E-01 3.92E-01 4.30E-01 -
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Stats for COX2 (group size: 16 species)
GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Range (min-max) 44.8 - 49.7% 50.3 - 55.0% 205 - 235 98 - 107 146 - 166 198 - 215 5.7 - 29.0
Median 46.1% 53.9% 213 102 158 210 11.0
Average ± stdev 46.4 ± 1.2% 53.5 ± 1.2% 215 ± 6 102 ± 2 157 ± 4 209 ± 4 12.5 ± 5.2
Coefficient of variation 0.03 0.02 0.03 0.03 0.03 0.02 0.41
Pearson correlation
coefficient with log10MLS		 0.59 -0.59 0.56 0.32 -0.44 -0.56 -
Pearson p-value
(two tailed)		 1.65E-02 1.67E-02 2.53E-02 2.28E-01 8.53E-02 2.26E-02 -
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Stats for COX3 (group size: 16 species)
GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Range (min-max) 46.9 - 49.9% 50.1 - 52.9% 247 - 268 117 - 126 182 - 204 204 - 224 5.7 - 29.0
Median 48.2% 51.8% 259 122 191 215 11.0
Average ± stdev 48.4 ± 0.9% 51.6 ± 0.8% 257 ± 5 121 ± 2 190 ± 5 214 ± 5 12.5 ± 5.2
Coefficient of variation 0.02 0.02 0.02 0.02 0.03 0.03 0.41
Pearson correlation
coefficient with log10MLS		 0.40 -0.41 0.44 0.03 -0.36 -0.12 -
Pearson p-value
(two tailed)		 1.26E-01 1.15E-01 9.21E-02 9.11E-01 1.76E-01 6.66E-01 -
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Stats for CYTB (group size: 16 species)
GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Range (min-max) 45.8 - 47.9% 52.0 - 54.2% 374 - 396 145 - 157 269 - 285 315 - 339 5.7 - 29.0
Median 47.3% 52.8% 390 150 278 329 11.0
Average ± stdev 47.1 ± 0.6% 52.9 ± 0.6% 388 ± 6 150 ± 3 276 ± 4 327 ± 5 12.5 ± 5.2
Coefficient of variation 0.01 0.01 0.02 0.02 0.02 0.02 0.41
Pearson correlation
coefficient with log10MLS		 0.25 -0.28 0.36 -0.18 -0.56 0.14 -
Pearson p-value
(two tailed)		 3.59E-01 2.87E-01 1.73E-01 5.08E-01 2.37E-02 5.98E-01 -
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Stats for ND1 (group size: 16 species)
GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Range (min-max) 43.9 - 49.3% 50.7 - 56.1% 296 - 343 124 - 150 239 - 280 252 - 285 5.7 - 29.0
Median 45.8% 54.4% 309 141 265 265 11.0
Average ± stdev 45.9 ± 1.6% 54.1 ± 1.6% 310 ± 12 138 ± 7 263 ± 11 266 ± 9 12.5 ± 5.2
Coefficient of variation 0.03 0.03 0.04 0.05 0.04 0.04 0.41
Pearson correlation
coefficient with log10MLS		 0.62 -0.62 0.64 0.14 -0.65 -0.17 -
Pearson p-value
(two tailed)		 1.09E-02 1.09E-02 7.27E-03 6.17E-01 6.88E-03 5.40E-01 -
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Stats for ND2 (group size: 16 species)
GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Range (min-max) 42.0 - 46.0% 54.0 - 58.0% 344 - 366 93 - 113 246 - 271 307 - 332 5.7 - 29.0
Median 44.6% 55.5% 355 109 258 317 11.0
Average ± stdev 44.5 ± 0.9% 55.5 ± 1.0% 356 ± 5 106 ± 5 259 ± 6 317 ± 6 12.5 ± 5.2
Coefficient of variation 0.02 0.02 0.02 0.05 0.02 0.02 0.41
Pearson correlation
coefficient with log10MLS		 0.55 -0.54 0.66 0.27 -0.51 -0.31 -
Pearson p-value
(two tailed)		 2.81E-02 2.94E-02 5.74E-03 3.03E-01 4.37E-02 2.49E-01 -
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Stats for ND3 (group size: 16 species)
GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Range (min-max) 41.6 - 47.6% 52.4 - 58.4% 109 - 126 37 - 47 86 - 99 94 - 106 5.7 - 29.0
Median 45.3% 55.0% 115 43 91 101 11.0
Average ± stdev 45.3 ± 1.6% 54.7 ± 1.6% 116 ± 4 42 ± 2 91 ± 3 100 ± 3 12.5 ± 5.2
Coefficient of variation 0.03 0.03 0.04 0.07 0.04 0.04 0.41
Pearson correlation
coefficient with log10MLS		 0.48 -0.48 0.63 -0.14 -0.38 -0.35 -
Pearson p-value
(two tailed)		 5.75E-02 5.75E-02 8.73E-03 5.96E-01 1.47E-01 1.86E-01 -
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Stats for ND4 (group size: 16 species)
GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Range (min-max) 44.9 - 47.7% 52.3 - 55.1% 471 - 501 138 - 158 304 - 328 414 - 431 5.7 - 29.0
Median 46.4% 53.6% 490 151 315 424 11.0
Average ± stdev 46.3 ± 0.8% 53.6 ± 0.8% 488 ± 7 150 ± 5 316 ± 6 422 ± 5 12.5 ± 5.2
Coefficient of variation 0.02 0.01 0.02 0.04 0.02 0.01 0.41
Pearson correlation
coefficient with log10MLS		 -0.08 0.07 -0.10 -0.01 0.05 0.07 -
Pearson p-value
(two tailed)		 7.76E-01 8.08E-01 7.23E-01 9.74E-01 8.68E-01 8.02E-01 -
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Stats for ND4L (group size: 16 species)
GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Range (min-max) 45.8 - 51.5% 48.5 - 54.2% 101 - 115 34 - 42 65 - 79 75 - 84 5.7 - 29.0
Median 49.2% 50.8% 109 36 72 81 11.0
Average ± stdev 49.0 ± 1.4% 51.0 ± 1.4% 108 ± 3 36 ± 2 71 ± 3 80 ± 2 12.5 ± 5.2
Coefficient of variation 0.03 0.03 0.03 0.06 0.05 0.03 0.41
Pearson correlation
coefficient with log10MLS		 0.29 -0.29 0.28 0.09 -0.30 -0.06 -
Pearson p-value
(two tailed)		 2.78E-01 2.78E-01 2.90E-01 7.26E-01 2.56E-01 8.28E-01 -
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Stats for ND5 (group size: 16 species)
GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Range (min-max) 43.4 - 46.5% 53.5 - 56.5% 585 - 638 196 - 220 409 - 441 556 - 586 5.7 - 29.0
Median 45.9% 54.2% 627 206 420 568 11.0
Average ± stdev 45.6 ± 0.7% 54.4 ± 0.7% 622 ± 12 206 ± 5 421 ± 8 566 ± 6 12.5 ± 5.2
Coefficient of variation 0.02 0.01 0.02 0.03 0.02 0.01 0.41
Pearson correlation
coefficient with log10MLS		 0.15 -0.14 0.15 0.01 -0.19 -0.01 -
Pearson p-value
(two tailed)		 5.91E-01 5.99E-01 5.81E-01 9.76E-01 4.72E-01 9.62E-01 -
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Stats for ND6 (group size: 16 species)
GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Range (min-max) 47.6 - 51.8% 48.2 - 52.4% 198 - 214 41 - 57 53 - 66 197 - 212 5.7 - 29.0
Median 48.7% 51.4% 205 51 61 205 11.0
Average ± stdev 49.1 ± 1.1% 50.8 ± 1.2% 205 ± 4 49 ± 4 58 ± 3 204 ± 4 12.5 ± 5.2
Coefficient of variation 0.02 0.02 0.02 0.08 0.07 0.02 0.41
Pearson correlation
coefficient with log10MLS		 0.22 -0.19 0.02 0.28 -0.00 -0.27 -
Pearson p-value
(two tailed)		 4.15E-01 4.78E-01 9.45E-01 2.98E-01 9.95E-01 3.14E-01 -
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Stats for 12S rRNA gene (group size: 16 species)
GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Range (min-max) 39.4 - 49.1% 50.9 - 57.7% 15 - 269 13 - 209 23 - 208 18 - 305 5.7 - 29.0
Median 48.3% 51.9% 263 207 206 299 11.0
Average ± stdev 47.5 ± 2.3% 52.3 ± 1.6% 236 ± 72 186 ± 54 186 ± 51 269 ± 80 12.5 ± 5.2
Coefficient of variation 0.05 0.03 0.30 0.29 0.28 0.30 0.41
Pearson correlation
coefficient with log10MLS		 0.05 -0.11 0.02 0.02 -0.00 -0.02 -
Pearson p-value
(two tailed)		 8.41E-01 6.85E-01 9.41E-01 9.47E-01 9.86E-01 9.34E-01 -
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Stats for 16S rRNA gene (group size: 16 species)
GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Range (min-max) 43.5 - 44.8% 55.2 - 56.5% 263 - 397 208 - 320 230 - 353 356 - 554 5.7 - 29.0
Median 43.9% 56.1% 384 317 349 551 11.0
Average ± stdev 44.0 ± 0.4% 56.0 ± 0.4% 369 ± 40 303 ± 35 332 ± 38 526 ± 64 12.5 ± 5.2
Coefficient of variation 0.01 0.01 0.11 0.12 0.12 0.12 0.41
Pearson correlation
coefficient with log10MLS		 0.49 -0.49 0.12 0.02 -0.05 0.02 -
Pearson p-value
(two tailed)		 5.50E-02 5.50E-02 6.62E-01 9.28E-01 8.51E-01 9.36E-01 -
Contact: Vadim E. Fraifeld, MD, PhD

Head: Lab for the Biology of Aging, The Shraga Segal Department of Microbiology, Immunology and Genetics, Faculty of Health Sciences, Ben-Gurion University of the Negev
P.O. Box 653, Beer-Sheva 8410501, Israel

Email:
How to cite us:

If you would like to cite this database please use:
Toren D, Barzilay T, Tacutu R, Lehmann G, Muradian KK, Fraifeld VE. MitoAge: a database for comparative analysis of mitochondrial DNA, with a special focus on animal longevity. Nucleic Acids Res. 2016; 44(D1):D1262-5.