Stats for family Varanidae
Species in family:
| Stats for total mtDNA (group size: 2 species) | |||||||
|---|---|---|---|---|---|---|---|
| Species | GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) |
| Varanus salvator | 44.1 | 55.8 | 5434 | 2278 | 4356 | 5410 | 15.7 |
| Varanus niloticus | 41.1 | 58.9 | 5274 | 2341 | 5015 | 5881 | 14.6 |
| Stats for total protein-coding genes (group size: 2 species) | |||||||
|---|---|---|---|---|---|---|---|
| Species | GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) |
| Varanus salvator | 45.0 | 55.0 | 3804 | 1312 | 2784 | 3470 | 15.7 |
| Varanus niloticus | 41.8 | 58.2 | 3513 | 1254 | 2984 | 3646 | 14.6 |
| Stats for D-loop (group size: 0 species) | |||||||
|---|---|---|---|---|---|---|---|
| There is no data for D-loop in this group. |
| Stats for total tRNA-coding genes (group size: 2 species) | |||||||
|---|---|---|---|---|---|---|---|
| Species | GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) |
| Varanus salvator | 42.9 | 57.0 | 394 | 242 | 364 | 482 | 15.7 |
| Varanus niloticus | 40.8 | 59.2 | 380 | 227 | 377 | 503 | 14.6 |
| Stats for total rRNA-coding genes (group size: 2 species) | |||||||
|---|---|---|---|---|---|---|---|
| Species | GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) |
| Varanus salvator | 45.4 | 54.6 | 685 | 410 | 476 | 840 | 15.7 |
| Varanus niloticus | 43.3 | 56.7 | 673 | 399 | 512 | 890 | 14.6 |
| Stats for ATP6 (group size: 2 species) | |||||||
|---|---|---|---|---|---|---|---|
| Species | GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) |
| Varanus salvator | 47.7 | 52.3 | 254 | 72 | 162 | 196 | 15.7 |
| Varanus niloticus | 41.4 | 58.6 | 220 | 63 | 187 | 213 | 14.6 |
| Stats for ATP8 (group size: 2 species) | |||||||
|---|---|---|---|---|---|---|---|
| Species | GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) |
| Varanus salvator | 46.7 | 53.3 | 66 | 11 | 39 | 49 | 15.7 |
| Varanus niloticus | 40.6 | 59.4 | 58 | 9 | 50 | 48 | 14.6 |
| Stats for COX1 (group size: 2 species) | |||||||
|---|---|---|---|---|---|---|---|
| Species | GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) |
| Varanus salvator | 45.7 | 54.3 | 471 | 258 | 427 | 440 | 15.7 |
| Varanus niloticus | 43.5 | 56.5 | 449 | 248 | 440 | 465 | 14.6 |
| Stats for COX2 (group size: 2 species) | |||||||
|---|---|---|---|---|---|---|---|
| Species | GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) |
| Varanus salvator | 43.5 | 56.1 | 216 | 84 | 169 | 218 | 15.7 |
| Varanus niloticus | 40.7 | 59.3 | 194 | 87 | 176 | 233 | 14.6 |
| Stats for COX3 (group size: 2 species) | |||||||
|---|---|---|---|---|---|---|---|
| Species | GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) |
| Varanus salvator | 45.7 | 53.8 | 246 | 112 | 202 | 220 | 15.7 |
| Varanus niloticus | 44.1 | 55.9 | 241 | 105 | 208 | 230 | 14.6 |
| Stats for CYTB (group size: 2 species) | |||||||
|---|---|---|---|---|---|---|---|
| Species | GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) |
| Varanus salvator | 45.3 | 54.7 | 376 | 137 | 298 | 322 | 15.7 |
| Varanus niloticus | 40.7 | 59.3 | 328 | 133 | 327 | 345 | 14.6 |
| Stats for ND1 (group size: 2 species) | |||||||
|---|---|---|---|---|---|---|---|
| Species | GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) |
| Varanus salvator | 46.0 | 53.9 | 335 | 109 | 239 | 282 | 15.7 |
| Varanus niloticus | 45.1 | 54.9 | 330 | 106 | 239 | 291 | 14.6 |
| Stats for ND2 (group size: 2 species) | |||||||
|---|---|---|---|---|---|---|---|
| Species | GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) |
| Varanus salvator | 45.1 | 54.9 | 374 | 94 | 237 | 332 | 15.7 |
| Varanus niloticus | 41.5 | 58.5 | 352 | 79 | 253 | 354 | 14.6 |
| Stats for ND3 (group size: 2 species) | |||||||
|---|---|---|---|---|---|---|---|
| Species | GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) |
| Varanus salvator | 43.9 | 56.1 | 111 | 41 | 94 | 100 | 15.7 |
| Varanus niloticus | 44.5 | 55.5 | 109 | 45 | 99 | 93 | 14.6 |
| Stats for ND4 (group size: 2 species) | |||||||
|---|---|---|---|---|---|---|---|
| Species | GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) |
| Varanus salvator | 44.8 | 55.2 | 486 | 129 | 351 | 407 | 15.7 |
| Varanus niloticus | 40.0 | 60.0 | 429 | 121 | 378 | 446 | 14.6 |
| Stats for ND4L (group size: 2 species) | |||||||
|---|---|---|---|---|---|---|---|
| Species | GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) |
| Varanus salvator | 45.1 | 54.9 | 108 | 26 | 73 | 90 | 15.7 |
| Varanus niloticus | 42.1 | 57.9 | 101 | 24 | 82 | 90 | 14.6 |
| Stats for ND5 (group size: 2 species) | |||||||
|---|---|---|---|---|---|---|---|
| Species | GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) |
| Varanus salvator | 43.8 | 56.2 | 595 | 191 | 434 | 574 | 15.7 |
| Varanus niloticus | 40.4 | 59.6 | 546 | 184 | 480 | 595 | 14.6 |
| Stats for ND6 (group size: 2 species) | |||||||
|---|---|---|---|---|---|---|---|
| Species | GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) |
| Varanus salvator | 41.2 | 58.8 | 169 | 50 | 63 | 249 | 15.7 |
| Varanus niloticus | 39.5 | 60.5 | 158 | 52 | 70 | 251 | 14.6 |
| Stats for 12S rRNA gene (group size: 2 species) | |||||||
|---|---|---|---|---|---|---|---|
| Species | GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) |
| Varanus salvator | 46.3 | 53.7 | 258 | 158 | 174 | 308 | 15.7 |
| Varanus niloticus | 43.2 | 56.8 | 248 | 161 | 195 | 343 | 14.6 |
| Stats for 16S rRNA gene (group size: 2 species) | |||||||
|---|---|---|---|---|---|---|---|
| Species | GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) |
| Varanus salvator | 44.9 | 55.1 | 427 | 252 | 302 | 532 | 15.7 |
| Varanus niloticus | 43.4 | 56.6 | 425 | 238 | 317 | 547 | 14.6 |
Contact: Vadim E. Fraifeld, MD, PhD
Head: Lab for the Biology of Aging, The Shraga Segal Department of Microbiology, Immunology and Genetics, Faculty of Health Sciences, Ben-Gurion University of the Negev
P.O. Box 653, Beer-Sheva 8410501, Israel
Email:
Head: Lab for the Biology of Aging, The Shraga Segal Department of Microbiology, Immunology and Genetics, Faculty of Health Sciences, Ben-Gurion University of the Negev
P.O. Box 653, Beer-Sheva 8410501, Israel
Email:
- How to cite us:
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If you would like to cite this database please use:
Toren D, Barzilay T, Tacutu R, Lehmann G, Muradian KK, Fraifeld VE. MitoAge: a database for comparative analysis of mitochondrial DNA, with a special focus on animal longevity. Nucleic Acids Res. 2016; 44(D1):D1262-5.
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