Stats for family Gekkonidae
Species in family:
| Stats for total mtDNA (group size: 4 species) | |||||||
|---|---|---|---|---|---|---|---|
| Species | GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) |
| Hemitheconyx caudicinctus | 45.8 | 54.2 | 5266 | 2539 | 4135 | 5103 | 16.2 |
| Phelsuma guimbeaui | 39.5 | 60.5 | 4615 | 2319 | 4684 | 5915 | 7.1 |
| Heteronotia binoei | 43.8 | 56.2 | 8009 | 3359 | 5961 | 8643 | 13.6 |
| Gekko gecko | 41.3 | 58.7 | 4542 | 2240 | 4341 | 5312 | 23.5 |
| Stats for total protein-coding genes (group size: 4 species) | |||||||
|---|---|---|---|---|---|---|---|
| Species | GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) |
| Hemitheconyx caudicinctus | 46.5 | 53.5 | 3696 | 1568 | 2765 | 3289 | 16.2 |
| Phelsuma guimbeaui | 39.9 | 60.1 | 3164 | 1357 | 3014 | 3806 | 7.1 |
| Heteronotia binoei | 44.9 | 55.1 | 5108 | 1775 | 3597 | 4862 | 13.6 |
| Gekko gecko | 41.2 | 58.8 | 3243 | 1417 | 3063 | 3600 | 23.5 |
| Stats for D-loop (group size: 0 species) | |||||||
|---|---|---|---|---|---|---|---|
| There is no data for D-loop in this group. |
| Stats for total tRNA-coding genes (group size: 4 species) | |||||||
|---|---|---|---|---|---|---|---|
| Species | GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) |
| Hemitheconyx caudicinctus | 44.9 | 55.1 | 399 | 263 | 359 | 455 | 16.2 |
| Phelsuma guimbeaui | 39.4 | 60.6 | 351 | 249 | 412 | 512 | 7.1 |
| Heteronotia binoei | 44.5 | 55.5 | 581 | 363 | 507 | 670 | 13.6 |
| Gekko gecko | 41.0 | 59.0 | 471 | 287 | 494 | 595 | 23.5 |
| Stats for total rRNA-coding genes (group size: 4 species) | |||||||
|---|---|---|---|---|---|---|---|
| Species | GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) |
| Hemitheconyx caudicinctus | 47.6 | 52.4 | 718 | 457 | 481 | 813 | 16.2 |
| Phelsuma guimbeaui | 40.3 | 59.7 | 589 | 417 | 564 | 927 | 7.1 |
| Heteronotia binoei | 46.1 | 53.9 | 1454 | 853 | 950 | 1747 | 13.6 |
| Gekko gecko | 42.5 | 57.5 | 653 | 429 | 584 | 881 | 23.5 |
| Stats for ATP6 (group size: 4 species) | |||||||
|---|---|---|---|---|---|---|---|
| Species | GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) |
| Hemitheconyx caudicinctus | 47.8 | 52.2 | 230 | 95 | 166 | 189 | 16.2 |
| Phelsuma guimbeaui | 35.7 | 64.3 | 181 | 62 | 202 | 236 | 7.1 |
| Heteronotia binoei | 45.4 | 54.6 | 239 | 70 | 164 | 207 | 13.6 |
| Gekko gecko | 40.6 | 59.4 | 208 | 71 | 192 | 216 | 23.5 |
| Stats for ATP8 (group size: 4 species) | |||||||
|---|---|---|---|---|---|---|---|
| Species | GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) |
| Hemitheconyx caudicinctus | 43.8 | 56.2 | 50 | 21 | 41 | 50 | 16.2 |
| Phelsuma guimbeaui | 38.2 | 61.8 | 48 | 15 | 44 | 58 | 7.1 |
| Heteronotia binoei | 41.8 | 58.2 | 53 | 16 | 37 | 59 | 13.6 |
| Gekko gecko | 33.8 | 66.3 | 46 | 8 | 47 | 59 | 23.5 |
| Stats for COX1 (group size: 4 species) | |||||||
|---|---|---|---|---|---|---|---|
| Species | GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) |
| Hemitheconyx caudicinctus | 47.6 | 52.4 | 485 | 264 | 422 | 404 | 16.2 |
| Phelsuma guimbeaui | 42.5 | 57.5 | 422 | 253 | 473 | 442 | 7.1 |
| Heteronotia binoei | 45.6 | 54.4 | 439 | 268 | 429 | 415 | 13.6 |
| Gekko gecko | 43.9 | 56.1 | 397 | 281 | 469 | 398 | 23.5 |
| Stats for COX2 (group size: 4 species) | |||||||
|---|---|---|---|---|---|---|---|
| Species | GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) |
| Hemitheconyx caudicinctus | 48.4 | 51.6 | 218 | 113 | 155 | 198 | 16.2 |
| Phelsuma guimbeaui | 41.1 | 58.9 | 181 | 102 | 166 | 239 | 7.1 |
| Heteronotia binoei | 45.5 | 54.5 | 210 | 103 | 156 | 219 | 13.6 |
| Gekko gecko | 40.5 | 59.5 | 185 | 96 | 196 | 216 | 23.5 |
| Stats for COX3 (group size: 4 species) | |||||||
|---|---|---|---|---|---|---|---|
| Species | GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) |
| Hemitheconyx caudicinctus | 49.2 | 50.8 | 257 | 129 | 188 | 210 | 16.2 |
| Phelsuma guimbeaui | 43.2 | 56.8 | 221 | 118 | 217 | 228 | 7.1 |
| Heteronotia binoei | 45.7 | 54.3 | 241 | 117 | 201 | 225 | 13.6 |
| Gekko gecko | 43.2 | 56.8 | 225 | 114 | 230 | 215 | 23.5 |
| Stats for CYTB (group size: 4 species) | |||||||
|---|---|---|---|---|---|---|---|
| Species | GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) |
| Hemitheconyx caudicinctus | 45.2 | 54.8 | 363 | 151 | 305 | 317 | 16.2 |
| Phelsuma guimbeaui | 42.1 | 57.9 | 326 | 153 | 318 | 340 | 7.1 |
| Heteronotia binoei | 45.2 | 54.8 | 374 | 141 | 293 | 331 | 13.6 |
| Gekko gecko | 41.7 | 58.3 | 345 | 134 | 312 | 357 | 23.5 |
| Stats for ND1 (group size: 4 species) | |||||||
|---|---|---|---|---|---|---|---|
| Species | GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) |
| Hemitheconyx caudicinctus | 46.7 | 53.3 | 319 | 129 | 227 | 285 | 16.2 |
| Phelsuma guimbeaui | 38.8 | 61.2 | 251 | 125 | 269 | 324 | 7.1 |
| Heteronotia binoei | 43.2 | 56.8 | 312 | 107 | 241 | 309 | 13.6 |
| Gekko gecko | 41.2 | 58.8 | 272 | 126 | 273 | 295 | 23.5 |
| Stats for ND2 (group size: 4 species) | |||||||
|---|---|---|---|---|---|---|---|
| Species | GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) |
| Hemitheconyx caudicinctus | 46.9 | 53.1 | 359 | 133 | 247 | 311 | 16.2 |
| Phelsuma guimbeaui | 36.5 | 63.5 | 291 | 86 | 265 | 391 | 7.1 |
| Heteronotia binoei | 44.9 | 55.1 | 377 | 90 | 213 | 361 | 13.6 |
| Gekko gecko | 41.4 | 58.6 | 316 | 114 | 261 | 347 | 23.5 |
| Stats for ND3 (group size: 4 species) | |||||||
|---|---|---|---|---|---|---|---|
| Species | GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) |
| Hemitheconyx caudicinctus | 45.0 | 55.0 | 100 | 53 | 92 | 95 | 16.2 |
| Phelsuma guimbeaui | 37.6 | 62.4 | 91 | 39 | 106 | 110 | 7.1 |
| Heteronotia binoei | 44.7 | 55.3 | 112 | 43 | 97 | 95 | 13.6 |
| Gekko gecko | 38.8 | 61.2 | 90 | 42 | 108 | 100 | 23.5 |
| Stats for ND4 (group size: 4 species) | |||||||
|---|---|---|---|---|---|---|---|
| Species | GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) |
| Hemitheconyx caudicinctus | 46.7 | 53.3 | 480 | 160 | 342 | 387 | 16.2 |
| Phelsuma guimbeaui | 39.0 | 61.0 | 399 | 133 | 360 | 473 | 7.1 |
| Heteronotia binoei | 43.7 | 56.3 | 457 | 137 | 326 | 439 | 13.6 |
| Gekko gecko | 38.4 | 61.6 | 389 | 138 | 373 | 471 | 23.5 |
| Stats for ND4L (group size: 4 species) | |||||||
|---|---|---|---|---|---|---|---|
| Species | GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) |
| Hemitheconyx caudicinctus | 44.1 | 55.9 | 88 | 43 | 70 | 96 | 16.2 |
| Phelsuma guimbeaui | 40.7 | 59.3 | 82 | 39 | 82 | 94 | 7.1 |
| Heteronotia binoei | 45.5 | 54.5 | 99 | 36 | 75 | 87 | 13.6 |
| Gekko gecko | 39.7 | 60.3 | 81 | 37 | 85 | 94 | 23.5 |
| Stats for ND5 (group size: 4 species) | |||||||
|---|---|---|---|---|---|---|---|
| Species | GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) |
| Hemitheconyx caudicinctus | 44.9 | 55.1 | 584 | 218 | 440 | 546 | 16.2 |
| Phelsuma guimbeaui | 39.3 | 60.7 | 510 | 193 | 441 | 647 | 7.1 |
| Heteronotia binoei | 43.7 | 56.3 | 601 | 179 | 417 | 587 | 13.6 |
| Gekko gecko | 40.6 | 59.4 | 528 | 207 | 459 | 616 | 23.5 |
| Stats for ND6 (group size: 4 species) | |||||||
|---|---|---|---|---|---|---|---|
| Species | GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) |
| Hemitheconyx caudicinctus | 44.1 | 55.9 | 164 | 61 | 76 | 209 | 16.2 |
| Phelsuma guimbeaui | 40.1 | 59.9 | 164 | 44 | 76 | 235 | 7.1 |
| Heteronotia binoei | 49.0 | 51.0 | 214 | 42 | 52 | 214 | 13.6 |
| Gekko gecko | 42.7 | 57.3 | 166 | 52 | 66 | 226 | 23.5 |
| Stats for 12S rRNA gene (group size: 4 species) | |||||||
|---|---|---|---|---|---|---|---|
| Species | GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) |
| Hemitheconyx caudicinctus | 50.7 | 49.3 | 283 | 197 | 188 | 278 | 16.2 |
| Phelsuma guimbeaui | 40.9 | 59.1 | 224 | 164 | 220 | 340 | 7.1 |
| Heteronotia binoei | 48.1 | 51.9 | 290 | 167 | 176 | 317 | 13.6 |
| Gekko gecko | 44.0 | 56.0 | 250 | 172 | 220 | 318 | 23.5 |
| Stats for 16S rRNA gene (group size: 4 species) | |||||||
|---|---|---|---|---|---|---|---|
| Species | GC (%) | AT (%) | G (bases) | C (bases) | A (bases) | T (bases) | Maximum lifespan (yrs) |
| Hemitheconyx caudicinctus | 45.6 | 54.4 | 435 | 260 | 293 | 535 | 16.2 |
| Phelsuma guimbeaui | 39.9 | 60.1 | 365 | 253 | 344 | 587 | 7.1 |
| Heteronotia binoei | 44.8 | 55.2 | 437 | 259 | 299 | 557 | 13.6 |
| Gekko gecko | 41.6 | 58.4 | 403 | 257 | 364 | 563 | 23.5 |
Contact: Vadim E. Fraifeld, MD, PhD
Head: Lab for the Biology of Aging, The Shraga Segal Department of Microbiology, Immunology and Genetics, Faculty of Health Sciences, Ben-Gurion University of the Negev
P.O. Box 653, Beer-Sheva 8410501, Israel
Email:
Head: Lab for the Biology of Aging, The Shraga Segal Department of Microbiology, Immunology and Genetics, Faculty of Health Sciences, Ben-Gurion University of the Negev
P.O. Box 653, Beer-Sheva 8410501, Israel
Email:
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If you would like to cite this database please use:
Toren D, Barzilay T, Tacutu R, Lehmann G, Muradian KK, Fraifeld VE. MitoAge: a database for comparative analysis of mitochondrial DNA, with a special focus on animal longevity. Nucleic Acids Res. 2016; 44(D1):D1262-5.
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