Stats for family Gasterosteidae

Stats for total mtDNA (group size: 4 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Pungitius pungitius 45.7 54.3 4658 2836 4387 4507 5.0
Culaea inconstans 42.9 57.1 4387 2676 4663 4739 2.0
Apeltes quadracus 44.9 55.1 4632 2757 4537 4546 3.0
Gasterosteus aculeatus 44.7 55.3 4352 2681 4447 4262 8.0
Stats for total protein-coding genes (group size: 4 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Pungitius pungitius 46.0 54.0 3432 1812 3229 2938 5.0
Culaea inconstans 42.5 57.5 3182 1665 3465 3099 2.0
Apeltes quadracus 44.7 55.3 3392 1711 3338 2970 3.0
Gasterosteus aculeatus 43.9 56.1 3267 1745 3444 2950 8.0
Stats for D-loop (group size: 3 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Pungitius pungitius 36.5 63.5 155 111 211 251 5.0
Culaea inconstans 38.9 61.1 180 140 228 274 2.0
Apeltes quadracus 40.4 59.6 182 154 250 245 3.0
Stats for total tRNA-coding genes (group size: 4 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Pungitius pungitius 47.4 52.6 400 333 363 450 5.0
Culaea inconstans 45.4 54.6 386 315 371 471 2.0
Apeltes quadracus 46.8 53.2 399 324 365 457 3.0
Gasterosteus aculeatus 47.0 53.0 394 333 365 454 8.0
Stats for total rRNA-coding genes (group size: 4 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Pungitius pungitius 46.0 54.0 644 567 569 853 5.0
Culaea inconstans 44.5 55.5 622 547 583 875 2.0
Apeltes quadracus 45.8 54.2 640 561 574 850 3.0
Gasterosteus aculeatus 46.0 54.0 646 566 594 830 8.0
Stats for ATP6 (group size: 4 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Pungitius pungitius 44.6 55.4 214 91 211 168 5.0
Culaea inconstans 40.8 59.2 191 88 223 182 2.0
Apeltes quadracus 44.0 56.0 211 90 207 176 3.0
Gasterosteus aculeatus 42.5 57.5 196 94 219 174 8.0
Stats for ATP8 (group size: 4 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Pungitius pungitius 45.2 54.8 53 23 46 46 5.0
Culaea inconstans 34.5 65.5 44 14 57 53 2.0
Apeltes quadracus 41.1 58.9 52 17 46 53 3.0
Gasterosteus aculeatus 41.1 58.9 46 23 53 46 8.0
Stats for COX1 (group size: 4 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Pungitius pungitius 46.6 53.4 437 286 455 373 5.0
Culaea inconstans 44.0 56.0 403 279 484 385 2.0
Apeltes quadracus 46.1 53.9 435 280 459 377 3.0
Gasterosteus aculeatus 44.0 56.0 401 281 490 379 8.0
Stats for COX2 (group size: 4 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Pungitius pungitius 43.8 56.2 194 109 191 197 5.0
Culaea inconstans 41.7 58.3 179 109 208 195 2.0
Apeltes quadracus 42.0 58.0 184 106 201 200 3.0
Gasterosteus aculeatus 42.4 57.6 182 111 196 202 8.0
Stats for COX3 (group size: 4 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Pungitius pungitius 48.0 52.0 245 132 213 196 5.0
Culaea inconstans 45.8 54.2 227 133 239 187 2.0
Apeltes quadracus 47.6 52.4 238 136 230 182 3.0
Gasterosteus aculeatus 44.8 55.2 217 135 246 187 8.0
Stats for CYTB (group size: 4 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Pungitius pungitius 47.0 53.0 352 184 321 284 5.0
Culaea inconstans 43.3 56.7 329 165 358 289 2.0
Apeltes quadracus 45.0 55.0 337 176 349 279 3.0
Gasterosteus aculeatus 43.0 57.0 321 170 366 284 8.0
Stats for ND1 (group size: 4 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Pungitius pungitius 46.4 53.6 290 162 303 220 5.0
Culaea inconstans 42.2 57.8 273 138 314 250 2.0
Apeltes quadracus 43.7 56.3 289 137 314 235 3.0
Gasterosteus aculeatus 43.5 56.5 279 145 313 238 8.0
Stats for ND2 (group size: 4 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Pungitius pungitius 45.3 54.7 332 142 293 280 5.0
Culaea inconstans 42.1 57.9 310 131 313 293 2.0
Apeltes quadracus 45.3 54.7 342 132 298 275 3.0
Gasterosteus aculeatus 45.0 55.0 340 130 297 278 8.0
Stats for ND3 (group size: 4 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Pungitius pungitius 49.3 50.7 114 59 101 77 5.0
Culaea inconstans 47.3 52.7 116 50 102 83 2.0
Apeltes quadracus 46.4 53.6 105 58 108 80 3.0
Gasterosteus aculeatus 46.7 53.3 107 56 109 77 8.0
Stats for ND4 (group size: 4 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Pungitius pungitius 44.8 55.2 405 213 399 364 5.0
Culaea inconstans 41.6 58.4 380 195 425 381 2.0
Apeltes quadracus 44.1 55.9 411 198 403 369 3.0
Gasterosteus aculeatus 44.5 55.5 400 214 407 360 8.0
Stats for ND4L (group size: 4 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Pungitius pungitius 49.8 50.2 98 50 87 62 5.0
Culaea inconstans 46.5 53.5 92 46 93 66 2.0
Apeltes quadracus 45.5 54.5 90 45 96 66 3.0
Gasterosteus aculeatus 47.1 52.9 91 49 93 64 8.0
Stats for ND5 (group size: 4 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Pungitius pungitius 44.5 55.5 534 285 534 486 5.0
Culaea inconstans 39.7 60.3 480 250 578 531 2.0
Apeltes quadracus 43.4 56.6 531 268 554 486 3.0
Gasterosteus aculeatus 42.7 57.3 525 261 574 479 8.0
Stats for ND6 (group size: 4 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Pungitius pungitius 46.9 53.1 167 78 82 195 5.0
Culaea inconstans 44.1 55.9 161 69 78 214 2.0
Apeltes quadracus 46.0 54.0 170 70 80 202 3.0
Gasterosteus aculeatus 46.6 53.4 165 78 88 191 8.0
Stats for 12S rRNA gene (group size: 4 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Pungitius pungitius 47.7 52.3 240 210 199 295 5.0
Culaea inconstans 46.1 53.9 234 201 196 312 2.0
Apeltes quadracus 47.2 52.8 237 208 196 301 3.0
Gasterosteus aculeatus 47.5 52.5 240 209 203 294 8.0
Stats for 16S rRNA gene (group size: 4 species)
Species GC (%) AT (%) G (bases) C (bases) A (bases) T (bases) Maximum lifespan (yrs)
Pungitius pungitius 45.1 54.9 404 357 370 558 5.0
Culaea inconstans 43.6 56.4 388 346 387 563 2.0
Apeltes quadracus 44.9 55.1 403 353 378 549 3.0
Gasterosteus aculeatus 45.1 54.9 406 357 391 536 8.0

Contact: Vadim E. Fraifeld, MD, PhD

Head: Lab for the Biology of Aging, The Shraga Segal Department of Microbiology, Immunology and Genetics, Faculty of Health Sciences, Ben-Gurion University of the Negev
P.O. Box 653, Beer-Sheva 8410501, Israel

Email:
How to cite us:

If you would like to cite this database please use:
Toren D, Barzilay T, Tacutu R, Lehmann G, Muradian KK, Fraifeld VE. MitoAge: a database for comparative analysis of mitochondrial DNA, with a special focus on animal longevity. Nucleic Acids Res. 2016; 44(D1):D1262-5.